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Taxonomy, ecology, and evolution in the Eastern Pacific abyss

Taxonomy, ecology, and evolution in the Eastern Pacific abyss
Taxonomy, ecology, and evolution in the Eastern Pacific abyss
The abyssal plains (3000–6000 m depth) underlie over two thirds of the world’s oceans. Once considered a vast contiguous landscape, advances in deep-ocean exploration have revealed the abyssal seafloor to be geologically and ecologically varied—harbouring biodiverse communities influenced by complex interactions between deterministic and stochastic assembly processes. However, the abyssal plains are also home to a wealth of mineral resources, the extraction of which presents an emerging threat to the diverse communities they coexist with. As such, there is a growing need for integrative assessments of both baseline patterns and the mechanisms maintaining abyssal diversity, to both monitor change and inform conservation efforts. Using the Clarion-Clipperton Zone (CCZ), Eastern Pacific Ocean—the world’s largest frontier for deep-sea mining—as a model ecosystem, this thesis explores the patterns and drivers of invertebrate diversity across the abyssal seafloor, from single species through to local and regional scales. Two species of scavenging amphipod, and a new genus and two species of myzostomid annelid are described using combined morphological and molecular methods, highlighting the value of an integrative taxonomic approach in assessing both biogeography and evolutionary history. These are the first species of Myzostomida known from abyssal depths, and the expanded phylogenetic hypothesis demonstrates unique evolutionary transitions between life history states. A regional-scale analysis of polychaete taxonomic and phylogenetic diversity suggests that environmental filtering rather than dispersal limitation is the primary driver of local species assembly, with an assessment of population-level connectivity in a subset of six abundant species highlighting broad ranges and high haplotype diversity. Additionally, this study provides the first evidence that polychaete diversity within the CCZ is higher than in other comparable deep-sea sedimented regions. Finally, the first spatio-temporally replicated assessment of deep-sea mining impacts on seafloor diversity was conducted, finding significant negative effects on abundance and diversity, and increased multivariate dispersion in community composition, against a backdrop of natural temporal variability. This thesis highlights the abyssal seafloor as a vast and dynamic ecosystem with an equally vast potential for novel taxonomic, ecological, and evolutionary discovery—should we act to protect it first.
Deep-sea, Invertebrate, Biodiversity, Abyssal, Deep-sea mining, Taxonomy, Systematics, Phylogenetics
University of Southampton
Stewart, Eva Catherine Dawson
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Stewart, Eva Catherine Dawson
e33676c3-5ece-406b-91fd-dbd65912079d
Copley, Jon
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Jones, Daniel
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Glover, Adrian
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Bribiesca-Contreras, Guadalupe
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Horton, Tammy
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Dahlgren, Thomas G.
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Stewart, Eva Catherine Dawson (2026) Taxonomy, ecology, and evolution in the Eastern Pacific abyss. University of Southampton, Doctoral Thesis, 281pp.

Record type: Thesis (Doctoral)

Abstract

The abyssal plains (3000–6000 m depth) underlie over two thirds of the world’s oceans. Once considered a vast contiguous landscape, advances in deep-ocean exploration have revealed the abyssal seafloor to be geologically and ecologically varied—harbouring biodiverse communities influenced by complex interactions between deterministic and stochastic assembly processes. However, the abyssal plains are also home to a wealth of mineral resources, the extraction of which presents an emerging threat to the diverse communities they coexist with. As such, there is a growing need for integrative assessments of both baseline patterns and the mechanisms maintaining abyssal diversity, to both monitor change and inform conservation efforts. Using the Clarion-Clipperton Zone (CCZ), Eastern Pacific Ocean—the world’s largest frontier for deep-sea mining—as a model ecosystem, this thesis explores the patterns and drivers of invertebrate diversity across the abyssal seafloor, from single species through to local and regional scales. Two species of scavenging amphipod, and a new genus and two species of myzostomid annelid are described using combined morphological and molecular methods, highlighting the value of an integrative taxonomic approach in assessing both biogeography and evolutionary history. These are the first species of Myzostomida known from abyssal depths, and the expanded phylogenetic hypothesis demonstrates unique evolutionary transitions between life history states. A regional-scale analysis of polychaete taxonomic and phylogenetic diversity suggests that environmental filtering rather than dispersal limitation is the primary driver of local species assembly, with an assessment of population-level connectivity in a subset of six abundant species highlighting broad ranges and high haplotype diversity. Additionally, this study provides the first evidence that polychaete diversity within the CCZ is higher than in other comparable deep-sea sedimented regions. Finally, the first spatio-temporally replicated assessment of deep-sea mining impacts on seafloor diversity was conducted, finding significant negative effects on abundance and diversity, and increased multivariate dispersion in community composition, against a backdrop of natural temporal variability. This thesis highlights the abyssal seafloor as a vast and dynamic ecosystem with an equally vast potential for novel taxonomic, ecological, and evolutionary discovery—should we act to protect it first.

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Published date: 2026
Keywords: Deep-sea, Invertebrate, Biodiversity, Abyssal, Deep-sea mining, Taxonomy, Systematics, Phylogenetics

Identifiers

Local EPrints ID: 510527
URI: http://eprints.soton.ac.uk/id/eprint/510527
PURE UUID: f0b108c5-562a-489b-bec9-f5832b9ba73b
ORCID for Eva Catherine Dawson Stewart: ORCID iD orcid.org/0000-0001-8383-5705
ORCID for Jon Copley: ORCID iD orcid.org/0000-0003-3333-4325

Catalogue record

Date deposited: 13 Apr 2026 16:31
Last modified: 14 Apr 2026 02:05

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Contributors

Thesis advisor: Jon Copley ORCID iD
Thesis advisor: Daniel Jones
Thesis advisor: Adrian Glover
Thesis advisor: Guadalupe Bribiesca-Contreras
Thesis advisor: Tammy Horton
Thesis advisor: Thomas G. Dahlgren

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