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Hyperspectral assessment of wheat lodging: From field to EnMAP satellite observations

Hyperspectral assessment of wheat lodging: From field to EnMAP satellite observations
Hyperspectral assessment of wheat lodging: From field to EnMAP satellite observations

Crop lodging, the permanent displacement of crop stems from their vertical position, causes substantial yield and quality losses in wheat production. Early and accurate detection of lodging and its severity is therefore essential for improving harvest management and reducing economic risk. This study, for the first time, examines hyperspectral data from the Environmental Mapping and Analysis Program (EnMAP) satellite in conjunction with field hyperspectral measurements and machine learning algorithms to detect wheat lodging and its severity and to identify spectral regions important for lodging detection. The study was conducted at Bonifiche Ferraresi Farm in Italy, where wheat biophysical measurements were collected alongside spectral measurements acquired using an Analytical Spectral Device (ASD) spectroradiometer, concurrent with EnMAP data acquisition. Wheat spectral reflectance derived from both field and EnMAP data was analyzed to determine how lodging alters wheat spectral characteristics and to identify sensitive wavelengths. Following spectral preprocessing, lodging severity was quantified using a lodging score and modeled with Principal Component Analysis (PCA) based Gaussian Process Regression (GPR), Partial Least Squares Regression (PLSR), Multilayer Perceptron (MLP), and Explainable Boosting Machine (EBM). Model performances and spectral relevance were evaluated through PCA loadings, Variable Importance in Projection (VIP), SHapley Additive exPlanations (SHAP) values, and EBM feature contributions. The results indicate that EBM achieved the highest predictive performance (R 2=0.66 and ɛ rmse=0.15 for ASD and R 2=0.60 and ɛ rmse=0.18 for EnMAP), while interpretability analyses consistently highlighted six key spectral regions (550, 670, 720–740, 865, 1650, and 2130–2190 nm) as being sensitive to lodging-caused structural changes in wheat canopies. These findings demonstrate the potential of hyperspectral modeling for satellite-based lodging assessment under cloud-free acquisition conditions, while highlighting current constraints on operational deployment related to revisit frequency, atmospheric effects, and transferability beyond the study site and growth stage.

Crop lodging, EnMAP, Hyperspectral, Machine learning, Remote sensing, Spectral feature importance, Wheat
0303-2434
Ogutu, Booker
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Dash, Jadu
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Un Nisa, Zaib
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Furkan Celik, Mehmet
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Padmageetha, Nagarajan
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Nelson, Andrew
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Boschetti, Mirco
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Dobrowolska, Ewalina
73e910a3-23bd-4767-9548-ef7e111248b7
Volden, Espen
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Darvishzadeh, Roshanak
bdb2abea-3a0c-4dd8-961a-fae26f9753c4
Ogutu, Booker
4e36f1d2-f417-4274-8f9c-4470d4808746
Dash, Jadu
51468afb-3d56-4d3a-aace-736b63e9fac8
Un Nisa, Zaib
8add3b0c-d74b-461d-8fcd-691805df17c6
Furkan Celik, Mehmet
7d9bc79a-5d17-4db0-afa3-808bfcf4cbf1
Padmageetha, Nagarajan
8b21d882-638a-44d9-bfd3-7088b8571efb
Nelson, Andrew
b2433cb3-aac1-4c7e-b4f5-9332b51e06d6
Boschetti, Mirco
848b16d8-1919-4198-8404-db44398e4769
Dobrowolska, Ewalina
73e910a3-23bd-4767-9548-ef7e111248b7
Volden, Espen
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Darvishzadeh, Roshanak
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Ogutu, Booker, Dash, Jadu, Un Nisa, Zaib, Furkan Celik, Mehmet, Padmageetha, Nagarajan, Nelson, Andrew, Boschetti, Mirco, Dobrowolska, Ewalina, Volden, Espen and Darvishzadeh, Roshanak (2026) Hyperspectral assessment of wheat lodging: From field to EnMAP satellite observations. International Journal of Applied Earth Observation and Geoinformation, 149, [105289]. (doi:10.1016/j.jag.2026.105289).

Record type: Article

Abstract

Crop lodging, the permanent displacement of crop stems from their vertical position, causes substantial yield and quality losses in wheat production. Early and accurate detection of lodging and its severity is therefore essential for improving harvest management and reducing economic risk. This study, for the first time, examines hyperspectral data from the Environmental Mapping and Analysis Program (EnMAP) satellite in conjunction with field hyperspectral measurements and machine learning algorithms to detect wheat lodging and its severity and to identify spectral regions important for lodging detection. The study was conducted at Bonifiche Ferraresi Farm in Italy, where wheat biophysical measurements were collected alongside spectral measurements acquired using an Analytical Spectral Device (ASD) spectroradiometer, concurrent with EnMAP data acquisition. Wheat spectral reflectance derived from both field and EnMAP data was analyzed to determine how lodging alters wheat spectral characteristics and to identify sensitive wavelengths. Following spectral preprocessing, lodging severity was quantified using a lodging score and modeled with Principal Component Analysis (PCA) based Gaussian Process Regression (GPR), Partial Least Squares Regression (PLSR), Multilayer Perceptron (MLP), and Explainable Boosting Machine (EBM). Model performances and spectral relevance were evaluated through PCA loadings, Variable Importance in Projection (VIP), SHapley Additive exPlanations (SHAP) values, and EBM feature contributions. The results indicate that EBM achieved the highest predictive performance (R 2=0.66 and ɛ rmse=0.15 for ASD and R 2=0.60 and ɛ rmse=0.18 for EnMAP), while interpretability analyses consistently highlighted six key spectral regions (550, 670, 720–740, 865, 1650, and 2130–2190 nm) as being sensitive to lodging-caused structural changes in wheat canopies. These findings demonstrate the potential of hyperspectral modeling for satellite-based lodging assessment under cloud-free acquisition conditions, while highlighting current constraints on operational deployment related to revisit frequency, atmospheric effects, and transferability beyond the study site and growth stage.

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Accepted/In Press date: 7 April 2026
Published date: 11 April 2026
Additional Information: Publisher Copyright: © 2026 The Authors
Keywords: Crop lodging, EnMAP, Hyperspectral, Machine learning, Remote sensing, Spectral feature importance, Wheat

Identifiers

Local EPrints ID: 511193
URI: http://eprints.soton.ac.uk/id/eprint/511193
ISSN: 0303-2434
PURE UUID: 77137348-4aa0-46a3-ba9b-9373c90e4576
ORCID for Booker Ogutu: ORCID iD orcid.org/0000-0002-1804-6205
ORCID for Jadu Dash: ORCID iD orcid.org/0000-0002-5444-2109
ORCID for Zaib Un Nisa: ORCID iD orcid.org/0000-0002-3781-4900

Catalogue record

Date deposited: 06 May 2026 16:44
Last modified: 07 May 2026 02:08

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Contributors

Author: Booker Ogutu ORCID iD
Author: Jadu Dash ORCID iD
Author: Zaib Un Nisa ORCID iD
Author: Mehmet Furkan Celik
Author: Nagarajan Padmageetha
Author: Andrew Nelson
Author: Mirco Boschetti
Author: Ewalina Dobrowolska
Author: Espen Volden
Author: Roshanak Darvishzadeh

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