chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	1363516	1384020	2	neutral	AA	7.92072	somatic	0	0.000372808929796135	0.000734771007424695
1	5669356	5677045	3	gain	AAB	0.843295	germline	1	0.00282131950917027	0.00536058857869182
1	10436536	10451914	2	neutral	AA	37.5727	somatic	0	0.0117274980310607	0.0566595185358508
1	11010648	11156739	2	neutral	AA	33.6717	somatic	0	7.59760361449736e-15	3.06388248105804e-12
1	14911534	14916660	2	neutral	AA	100	somatic	0	0.266822117881646	0.550333468762005
1	16882481	16943993	3	gain	AAB	0.964796	germline	1	1.0607259072779e-08	9.33827681848243e-10
1	16949119	16985001	2	neutral	AA	14.0872	somatic	0	0.753806220744257	0.905287907000596
1	30937973	31004611	2	neutral	AA	23.7243	somatic	0	0.00543865668425646	0.0144361242805089
1	35148982	35164360	2	neutral	AA	54.5678	somatic	0	0.00185574379546424	0.00322017602028546
1	36699597	36743168	2	neutral	AA	27.4592	somatic	0	0.00103133494594989	0.000567391714787147
1	57552165	57595736	2	neutral	AA	54.5784	somatic	0	0.0399070313844551	0.0706904958848676
1	57739264	57898170	2	neutral	AA	54.5873	somatic	0	0.696186022739928	0.542245612246225
1	58638877	58664507	2	neutral	AA	54.5678	somatic	0	0.166104489052849	0.375772582489755
1	59174544	59177107	3	gain	-	-1	somatic	0	0.0876790700253518	0.277622867712333
1	70526071	70582457	2	neutral	AA	97.0174	somatic	0	0.250194673122892	0.154596570258157
1	71002789	71056612	2	neutral	AA	100	somatic	0	0.218532451050773	0.28424050705415
1	72417565	72425254	2	neutral	AA	54.5683	somatic	0	0.47872358216062	0.649706505462375
1	76700338	76713153	2	neutral	AA	100	somatic	0	0.876882055946577	0.836984496852445
1	79670855	79675981	2	neutral	AA	100	somatic	0	0.922594899047938	0.996082369439064
1	80032238	80073246	2	neutral	AA	54.5679	somatic	0	0.250317911036854	0.48844051854111
1	83535859	83556363	2	neutral	AA	100	somatic	0	0.0111978120199394	0.0145747976001809
1	84999332	85050592	2	neutral	AA	100	somatic	0	0.0506704536319409	0.0435527237672062
1	93077908	93095849	2	neutral	AA	54.5678	somatic	0	0.101315951807471	0.218296013657013
1	93423913	93521307	2	neutral	AA	53.7089	somatic	0	4.65767488710028e-06	0.000228191215908335
1	93821178	93826304	1	loss	A	-1	somatic	0	0.0204951424560568	0.0557667607578841
1	100487541	100625943	2	neutral	AA	16.5462	somatic	0	2.64497310520238e-11	4.76467643117928e-10
1	107382011	107443523	2	neutral	AA	36.3786	somatic	0	0.00315139792427002	0.00382873664754479
1	125069274	125076963	3	gain	-	-1	germline	1	0.0143927558737809	0.0368751296178695
1	125079526	125082089	11	gain	-	-1	germline	1	0.0832695318159663	0.270045593990312
1	125082089	125084652	5	gain	-	-1	germline	1	0.0832801902260753	0.270064104989746
1	125161542	125166668	5	gain	-	-1	germline	1	0.0143119130455576	0.0366420757400377
1	152583079	152613835	1	loss	A	-1	germline	1	2.00636979822414e-08	9.33526034252452e-10
1	152918832	152959840	2	neutral	AA	54.568	somatic	0	0.845781318120044	0.684643172931273
1	159944015	159977334	2	neutral	AA	54.5678	germline	1	0.121447010375798	0.306067910274515
1	162184077	162266093	2	neutral	AA	27.3029	somatic	0	4.31859037683443e-07	5.19705807866533e-06
1	169257957	169273335	1	loss	A	-1	germline	1	8.00059211783557e-05	3.98425444846362e-05
1	172730822	172810275	2	neutral	AA	54.5678	germline	1	1.52617571414604e-12	6.87577772495729e-11
1	179838021	180017431	2	neutral	AA	46.3096	germline	1	4.38206248337017e-27	0
1	204178832	204196773	2	neutral	AA	16.5016	somatic	0	0.545908934653408	0.776133822135061
1	217719161	217765295	2	neutral	AA	36.5434	somatic	0	0.00312288503849323	0.00572001000209721
1	229070688	229324425	2	neutral	AA	23.9913	somatic	0	2.30242732501875e-20	0
1	233778919	233830179	2	neutral	AA	100	somatic	0	0.00069732677219567	0.00321806351044851
1	234775926	234783615	7	gain	AAAAABB	7.35217	germline	1	0.00270074224960241	0.00495880458388043
1	236095871	236098434	6	gain	AAAABB	9.71038	germline	1	0.0832789362381173	0.270061927177034
1	237441446	237584974	2	neutral	AA	9.64231	somatic	0	6.17013766713368e-05	0.000112536284144094
1	248585370	248908308	3	gain	AAB	2.81889	somatic	0	1.00891759109362e-67	0
1	248908308	248926249	3	gain	-	-1	somatic	0	0.000109215624430186	9.3821393956528e-05
1	248926249	248956422	3	gain	AAB	-1	somatic	0	NA	NA
2	0	287056	3	gain	-	-1	somatic	0	6.35294234688612e-59	0
2	32914046	32916609	5	gain	-	-1	germline	1	0.0832808172257901	0.27006519390091
2	52523559	52559441	1	loss	A	-1	germline	1	1.12613039841895e-08	1.00206676290071e-09
2	89771638	89789579	5	gain	-	-1	germline	1	4.59858304187745e-06	1.66464386275322e-06
2	89794705	89825461	4	gain	-	-1	germline	1	9.25760951017659e-09	5.68254443500393e-10
2	89825461	89843402	26	gain	-	-1	germline	1	4.59460308472812e-06	1.66364921683204e-06
2	89843402	89851091	4	gain	-	-1	germline	1	0.00270164367661022	0.00495989345268866
2	109199178	109201741	12	gain	-	-1	germline	1	0.0832695318159663	0.270045593990312
2	227376545	227394486	3	gain	-	-1	germline	1	4.69205349871807e-06	1.7780308780857e-06
2	239591803	239594366	2	neutral	AA	27.2858	somatic	0	0.44599093141607	0.677753510676151
2	239899363	239901926	2	neutral	AA	100	somatic	0	0.853687825624229	0.919536294011106
2	240309443	240312006	2	neutral	AA	100	somatic	0	0.514926179503065	0.731164243553615
2	240470912	240473475	2	neutral	AA	100	somatic	0	0.158164398582197	0.382600483753743
2	240819480	240822043	2	neutral	AA	100	somatic	0	0.961360902431845	0.954288618319364
2	241114225	241116788	2	neutral	AA	54.5678	somatic	0	0.197904526172082	0.433003528362507
2	241124477	241127040	2	neutral	AA	100	somatic	0	0.199353799120626	0.434764904287822
2	241262879	241265442	2	neutral	AA	100	somatic	0	0.0986139738699358	0.295750815474019
2	241452541	241460230	2	neutral	AA	54.8506	somatic	0	0.0762933716770691	0.134783613283636
2	241521742	241524305	2	neutral	AA	100	somatic	0	0.114118188389008	0.320084639794116
2	241560187	241593506	2	neutral	AA	5.12008	somatic	0	6.28724936755402e-06	8.15960320952325e-05
2	241652455	241657581	3	gain	-	-1	somatic	0	0.0221419765858809	0.0607902894885459
2	241657581	241660144	2	neutral	AA	100	somatic	0	0.0979195467044787	0.294627075828129
3	0	20504	3	gain	AAB	-1	somatic	0	NA	NA
3	20504	238359	3	gain	AAB	1.10773	somatic	0	2.77134365666577e-48	0
3	1422465	1432717	2	neutral	AA	100	somatic	0	0.0476377729897413	0.176982203646272
3	2273381	2283633	2	neutral	AA	100	somatic	0	0.371128450919414	0.30025549064521
3	3598452	3611267	2	neutral	AA	54.8359	somatic	0	0.8167632320124	0.262194934573949
3	5536080	5569399	2	neutral	AA	22.0989	somatic	0	0.254316074483326	0.633114077484972
3	9864987	9913684	2	neutral	AA	88.7303	somatic	0	0.332434896176402	0.218235788293746
3	11359216	11369468	2	neutral	AA	100	somatic	0	0.0128128782468209	0.013480631045045
3	17282309	17354073	2	neutral	AA	100	somatic	0	1.89797842570466e-09	4.0583977067854e-08
3	17428400	17464282	2	neutral	AA	100	somatic	0	7.95331135962281e-05	0.000275541313086047
3	24971309	24984124	2	neutral	AA	36.3845	somatic	0	0.89242342294061	0.878464686881138
3	33972565	33990506	2	neutral	AA	36.5473	somatic	0	0.876159833652215	0.875089310541656
3	43086593	43140416	2	neutral	AA	100	somatic	0	9.64394493322623e-07	2.3464947851437e-07
3	45539384	45552199	2	neutral	AA	54.5678	somatic	0	0.0320649540725551	0.0376017146593033
3	48561161	48602169	2	neutral	AA	36.3793	somatic	0	8.46891407779323e-06	0.000457752114306431
3	49043005	49050694	2	neutral	AA	54.5678	somatic	0	0.287669460811971	0.40569473800099
3	52390283	52403098	2	neutral	AA	27.2842	somatic	0	0.00907680957973579	0.0491867642735678
3	54584211	54589337	2	neutral	AA	54.5678	somatic	0	0.933594834846332	0.756083277772004
3	60612387	60632891	2	neutral	AA	68.8439	somatic	0	0.0481993257416556	0.049506937659323
3	66668756	66681571	2	neutral	AA	100	somatic	0	0.525085876716402	0.293976472054241
3	67701645	67706771	2	neutral	AA	100	somatic	0	0.189167968606075	0.259098453494524
3	68824239	68867810	2	neutral	AA	58.4111	somatic	0	0.268362012809188	0.225987479164428
3	71197577	71205266	2	neutral	AA	100	somatic	0	0.515603353522599	0.557360274762015
3	75670012	75959631	2	neutral	AA	0.307066	germline	1	0.186888088889082	0.137489880845476
3	75964757	76262065	2	neutral	AA	49.372	somatic	0	1.31578999654501e-12	3.38618022510673e-14
3	85442731	85452983	2	neutral	AA	93.3662	somatic	0	0.354046110256627	0.460777012522486
3	90271423	93841682	2	neutral	AA	1.04086	somatic	0	0.166885205396185	0.0437536742826812
3	94254325	94282518	2	neutral	AA	100	somatic	0	0.629244722091288	0.669850594547344
3	94956587	95012973	2	neutral	AA	37.4889	somatic	0	0.0198226676983851	0.0188790495013611
3	95112930	95141123	2	neutral	AA	54.5722	somatic	0	0.00569150638540955	0.051827534145573
3	124705328	124710454	2	neutral	AA	54.5681	somatic	0	0.62389885086559	0.80629328803089
3	127504124	127514376	2	neutral	AA	100	germline	1	0.018499246400479	0.0160504309738496
3	127557947	127565636	2	neutral	AA	27.2843	somatic	0	0.998752597475028	0.890038601662809
3	129800572	129851832	2	neutral	AA	37.8578	somatic	0	0.000524279014604892	0.00122840444886296
3	131840720	131881728	2	neutral	AA	100	somatic	0	0.000655866778374537	0.00677790075670825
3	135187998	135195687	2	neutral	AA	54.5693	somatic	0	0.637485712351585	0.904541981835037
3	137476757	137538269	2	neutral	AA	100	somatic	0	0.63010711175535	0.123785857116236
3	141182855	141249493	2	neutral	AA	71.7736	somatic	0	0.000269853289900408	0.000463753984940141
3	142315701	142407969	2	neutral	AA	34.1055	somatic	0	5.97843341820483e-11	7.66412604491506e-08
3	142918006	142966703	2	neutral	AA	93.3662	germline	1	0.000312260483088484	0.00485821320862756
3	145391301	145396427	2	neutral	AA	100	somatic	0	0.769753843914387	0.704023565071607
3	154343860	154374616	2	neutral	AA	36.4661	germline	1	0.50092293879841	0.653739232195186
3	164806026	164811152	2	neutral	AA	100	somatic	0	0.656232038373138	0.786733255274233
3	169744927	169770557	2	neutral	AA	100	somatic	0	0.0384063326449367	0.164930793966952
3	190123340	190269431	2	neutral	AA	39.9701	somatic	0	0.370977706292334	0.125723542676901
3	194641909	194647035	2	neutral	AA	54.5693	somatic	0	0.879487450239145	0.98881159840596
4	2237499	2245188	2	neutral	AA	54.5678	somatic	0	0.0258122997072436	0.0421571448022212
4	8232356	8240045	2	neutral	AA	54.5678	somatic	0	0.171572512244645	0.3464579413791
4	8650125	8732141	2	neutral	AA	17.8899	somatic	0	0.0148482120271214	0.00830940769059518
4	22731247	22874775	2	neutral	AA	100	somatic	0	3.43014768409114e-05	7.87353365205856e-05
4	26527050	26591125	2	neutral	AA	63.9118	somatic	0	1.03516717960654e-07	8.1547037974472e-06
4	32916609	32942239	2	neutral	AA	54.5678	somatic	0	0.00231633868251794	0.0109789219572451
4	33316437	33326689	2	neutral	AA	45.5615	somatic	0	0.303575028449435	0.210226181295468
4	40292923	40295486	4	gain	AAAA	43.9855	germline	1	0.0832845793043819	0.270071727435192
4	43468480	43478732	2	neutral	AA	100	somatic	0	0.60735617362055	0.344074126489934
4	48433011	48453515	2	neutral	AA	100	somatic	0	0.521584648567279	0.247023198744117
4	54945594	54973787	2	neutral	AA	27.2839	somatic	0	0.948248252996307	0.981073500761108
4	64249284	64300544	2	neutral	AA	36.5405	somatic	0	0.000596144510792805	0.000806457240094982
4	78345784	78361162	2	neutral	AA	100	somatic	0	0.62339600072877	0.796297142295664
4	108048391	108079147	2	neutral	AA	22.7184	somatic	0	0.318525861307098	0.623268979032964
4	118256820	118300391	2	neutral	AA	21.8614	somatic	0	0.274393054316748	0.19919038429656
4	147867159	147895352	2	neutral	AA	25.6335	somatic	0	0.72347867084935	0.646862303662193
4	151229815	151242630	2	neutral	AA	100	somatic	0	0.0816757751182679	0.140875296392108
4	152677910	152877824	2	neutral	AA	13.1639	somatic	0	2.05051582295028e-16	3.5527136788005e-14
4	172067005	172072131	0	loss	-	-1	germline	1	0.0143099342180487	0.036639096255757
4	178733368	178792317	2	neutral	AA	100	somatic	0	0.00107072514516665	0.00356269976117563
4	182723959	182729085	2	neutral	AA	100	somatic	0	0.316208057480522	0.503413211474903
5	0	415206	3	gain	-	-1	somatic	0	2.45865706696095e-56	0
5	415206	417769	5	gain	-	-1	germline	1	0.0832808172257901	0.27006519390091
5	46405678	46410804	1	loss	A	-1	germline	1	0.0143412279279138	0.0367226019868372
5	58026320	58039135	1	loss	A	-1	germline	1	0.000477657861172608	0.000361541529925402
5	91204355	91206918	0	loss	-	-1	somatic	0	0.0832845793043819	0.270071727435201
5	114988995	114994121	1	loss	A	-1	somatic	0	0.0209732662924551	0.0490901272199501
5	140424207	140503660	2	neutral	AA	36.5335	somatic	0	2.034555172503e-07	1.02430890991378e-07
5	140724078	140752271	2	neutral	AA	21.8272	somatic	0	0.00245388353170165	0.00908555744855011
5	141175166	141177729	4	gain	AAAB	64.8561	germline	1	0.0832839522817234	0.2700706385048
5	142935947	143012837	2	neutral	AA	45.6508	somatic	0	0.00269754579358465	0.0668534387507547
5	144130305	144135431	2	neutral	AA	54.5799	somatic	0	0.328424105098752	0.473935612419091
5	147938923	147951738	2	neutral	AA	54.6224	somatic	0	0.936301836251957	0.998953660616942
5	152006404	152039723	2	neutral	AA	54.5678	somatic	0	0.0876047558750883	0.2313394516692
5	153395550	153477566	2	neutral	AA	18.2436	somatic	0	0.0135405351383391	0.0152383897151855
5	154328482	154379742	2	neutral	AA	36.3786	somatic	0	0.703049658375803	0.17919894648139
5	156917112	156924801	2	neutral	AA	54.5678	somatic	0	0.231667267712173	0.341615039399208
5	160061913	160082417	2	neutral	AA	54.6882	somatic	0	0.595728265568139	0.927885764229903
5	178584714	178587277	4	gain	AAAB	74.4673	somatic	0	0.0832914768060136	0.270083705881032
5	179435630	179438193	2	neutral	AA	100	somatic	0	0.123584437779132	0.334261428698992
5	180209656	180212219	2	neutral	AA	100	somatic	0	0.0995730085008701	0.297298574869492
5	180268605	180271168	2	neutral	AA	100	somatic	0	0.104760752468507	0.305577303257752
5	180950363	181001623	1	loss	A	-1	germline	1	3.3449168853845e-12	1.11022302462516e-15
6	0	256300	3	gain	-	-1	somatic	0	2.1897672753294e-24	0
6	256300	381887	5	gain	-	-1	germline	1	3.33792878781461e-31	0
6	32488588	32591108	0	loss	-	-1	germline	1	7.11710701377343e-15	1.11022302462516e-16
6	60230500	60240752	3	gain	-	-1	germline	1	0.000538994754776623	0.000689606041331503
6	98583232	98621677	2	neutral	AA	100	somatic	0	0.84036881303443	0.581263007692852
6	103288900	103317093	1	loss	A	-1	germline	1	1.57952411357467e-07	3.61318797104104e-08
6	105088126	105111193	2	neutral	AA	44.5317	germline	1	0.635958430466229	0.603329047785247
6	111326468	111362350	2	neutral	AA	100	somatic	0	0.000788578150404364	0.00100703073760866
6	116439653	116542173	2	neutral	AA	49.895	somatic	0	4.0977068061618e-08	1.78447957455141e-06
6	118469549	118646396	2	neutral	AA	11.9718	somatic	0	0.00674244673154066	0.00734535775642275
6	119107736	119123114	2	neutral	AA	56.5207	somatic	0	0.0811748167513229	0.0686600803014554
6	125156416	125174357	2	neutral	AA	54.5678	somatic	0	0.77996429718583	0.89540566348324
6	134219184	134234562	2	neutral	AA	18.2046	somatic	0	0.615371082239775	0.603384059063209
6	135541692	135657027	2	neutral	AA	54.5678	somatic	0	3.80438184251738e-13	2.77555756156289e-14
6	137868896	137909904	2	neutral	AA	54.5873	somatic	0	6.76763546392181e-05	0.00111566635905047
6	137997046	138012424	2	neutral	AA	100	somatic	0	0.751411228265296	0.896284645668891
6	140980378	141016260	2	neutral	AA	70.5179	somatic	0	0.00350433030650233	0.00544353604533732
6	143648461	143702284	2	neutral	AA	100	somatic	0	7.10210171441688e-07	9.88857061545723e-06
6	150384025	150414781	2	neutral	AA	46.4356	somatic	0	0.162842679556434	0.362877515414132
6	157214420	157237487	2	neutral	AA	36.9993	somatic	0	0.000408314204812349	0.000542821653115144
6	166858989	166874367	2	neutral	AA	100	somatic	0	0.281132817957098	0.197168588255829
6	167210120	167276758	2	neutral	AA	21.8297	somatic	0	0.00823422599164991	0.00502276111266398
6	167932886	168194312	3	gain	AAB	0.189004	germline	1	1.94868404382783e-65	0
6	168194312	168196875	3	gain	AAB	6.68557	germline	1	0.0833291076882214	0.270149049684851
6	170536894	170606095	3	gain	AAB	3.54249	somatic	0	3.14220277778859e-19	0
6	170606095	170805979	3	gain	AAB	-1	somatic	0	NA	NA
7	1530111	1553178	2	neutral	AA	36.3789	somatic	0	0.110075621820973	0.265224446180214
7	26096466	26106718	1	loss	A	-1	germline	1	0.00118203911367679	0.00161642374683735
7	26919189	26952508	2	neutral	AA	100	somatic	0	0.397255454773881	0.63031520867841
7	44906323	44926827	2	neutral	AA	100	somatic	0	0.782773730068279	0.892521024365269
7	45167749	45188253	2	neutral	AA	100	somatic	0	0.267004328163126	0.67444730293475
7	54679042	54799503	2	neutral	AA	100	somatic	0	2.17393624936672e-07	1.23966372012063e-06
7	57880229	57995564	2	neutral	AA	1.47787	somatic	0	0.0148228412623835	0.0435378619516358
7	62401361	62406487	4	gain	-	-1	germline	1	0.0143121109415839	0.0366405859713986
7	62437243	62455184	3	gain	AAB	2.18863	germline	1	0.000650597569932798	0.00388557491157082
7	65797336	65822966	3	gain	AAB	0.20698	germline	1	4.39987040964737e-08	4.38046010575732e-09
7	76413282	76428660	2	neutral	AA	100	somatic	0	0.0569112618273879	0.215805821025481
7	91527293	91729770	2	neutral	AA	100	somatic	0	0.076016990543993	0.0453557134966965
7	91729770	92093716	2	neutral	AA	30.4983	somatic	0	1.06538943450789e-07	4.96811651262696e-07
7	94072352	94121049	2	neutral	AA	37.3188	somatic	0	0.0808288205096964	0.0710749756317649
7	94736169	94831000	2	neutral	AA	54.5678	somatic	0	0.0244092398778777	0.0103515094840195
7	100948881	100956570	3	gain	AAA	4.22333	germline	1	0.00270418718176235	0.00496564389200971
7	100956570	100959133	14	gain	AAAAAAAAAAAAAB	6.20693	germline	1	0.0832695318159663	0.270045593990312
7	100959133	100971948	4	gain	AABB	0.311576	germline	1	0.000109435543311041	9.55908901726366e-05
7	101128291	101423036	2	neutral	AA	5.41091	somatic	0	2.05624175744202e-15	4.32986979603811e-15
7	109260690	109294009	2	neutral	AA	54.6929	germline	1	0.000486203299383586	0.00028453481912416
7	116293562	116301251	1	loss	A	-1	germline	1	0.00621117478252918	0.00925534637861758
7	130907788	130920603	2	neutral	AA	100	somatic	0	0.941136514170918	0.561921318234661
7	134098723	134114101	1	loss	A	-1	germline	1	7.20166425646523e-05	4.81821252134029e-05
7	143848375	143850938	4	gain	AABB	100	germline	1	0.0832839522817234	0.2700706385048
7	152401106	152408795	8	gain	AAAAAABB	4.08734	germline	1	0.00270036373222084	0.00495832071252744
7	158149915	158152478	7	gain	AAAABBB	100	germline	1	0.0832726665277566	0.270051038305765
7	158249872	158257561	2	neutral	AA	54.5678	somatic	0	0.140001030495554	0.219090799923558
7	158593314	158595877	5	gain	AAABB	19.7184	germline	1	0.0832820712366916	0.270067371732851
7	158939319	158954697	3	gain	AAB	30.6018	somatic	0	0.000138573055235632	0.000180285352684662
7	158954697	158982890	3	gain	AAB	14.1488	somatic	0	4.71669903375493e-07	4.51949884183733e-08
7	158982890	159200745	3	gain	AAB	8.47186	somatic	0	6.79333586115381e-46	0
7	159200745	159203308	3	gain	AAB	-1	germline	1	NA	NA
7	159203308	159205871	5	gain	AAABB	75.036	germline	1	0.0832801902260753	0.270064104989746
7	159205871	159331458	3	gain	AAB	2.04437	somatic	0	1.75970969181841e-25	0
7	159331458	159345973	3	gain	AAB	-1	somatic	0	NA	NA
8	25114837	25132778	1	loss	A	-1	germline	1	1.40180550383371e-05	6.80843258016317e-06
8	43237810	43242936	8	gain	AAAAABBB	0.859079	germline	1	0.0143089448948036	0.0366373086669328
8	79217204	80352613	2	neutral	AA	50.4397	somatic	0	0.00075341471014078	2.77789958269548e-06
8	93505929	93841682	2	neutral	AA	100	somatic	0	0.233974804991053	0.0871066924689877
8	136666849	136851385	1	loss	A	-1	germline	1	2.07729943247713e-44	0
8	144125179	144127742	6	gain	AAAABB	7.92488	germline	1	0.0832776822654547	0.270059749377142
9	0	707388	3	gain	-	-1	somatic	0	4.46482033131178e-119	0
9	42386894	42389457	6	gain	AAABBB	55.7829	germline	1	0.0832776822654547	0.270059749377142
9	69267638	69295831	2	neutral	AA	100	somatic	0	0.451416661760257	0.889434187619951
9	71451314	71471818	2	neutral	AA	100	somatic	0	0.00399203173931182	0.00911537655974781
9	74247547	74262925	2	neutral	AA	100	somatic	0	0.364302866035206	0.323952619026184
9	85286388	85291514	2	neutral	AA	21.8271	somatic	0	0.497114970572244	0.891031273912656
9	88256905	88274846	2	neutral	AA	100	somatic	0	0.0669687901214616	0.0957334666524471
9	102104794	102179121	2	neutral	AA	100	somatic	0	0.00182638998460114	0.00152008463917386
9	105203461	105231654	2	neutral	AA	100	somatic	0	0.00350430092616117	0.00831469762811088
9	114273918	114304674	2	neutral	AA	54.5871	somatic	0	0.572556809168582	0.348233342803539
9	114379001	114391816	2	neutral	AA	100	somatic	0	0.291741256550948	0.637824906727223
9	118654085	118664337	2	neutral	AA	27.2839	somatic	0	0.112520130258349	0.158090399154988
9	127952649	128016724	2	neutral	AA	54.6382	germline	1	0.340695272369071	0.158412959481119
9	128513946	128531887	2	neutral	AA	54.5678	somatic	0	0.0851221301034691	0.163077565698537
9	128770246	130736067	1	loss	A	-1	somatic	0	0	0
9	130905225	130974426	2	neutral	AA	14.2051	somatic	0	0.287346261773259	0.322135979074173
9	133168354	133204236	2	neutral	AA	34.3064	somatic	0	0.00637600334694625	0.00409920072143521
9	133755281	133773222	2	neutral	AA	61.4175	somatic	0	0.00476855553388992	0.034667064715349
10	0	76890	3	gain	AAB	-1	somatic	0	NA	NA
10	76890	325501	3	gain	AAB	2.5298	somatic	0	3.6407706980023e-53	0
10	5077303	5302847	2	neutral	AA	100	somatic	0	4.61379076953404e-09	2.85075065775686e-08
10	9829105	9908558	2	neutral	AA	54.5986	somatic	0	0.743475657702646	0.720542085301671
10	24615052	24625304	2	neutral	AA	100	somatic	0	0.25226354963787	0.53876708608463
10	38483445	38527016	2	neutral	AA	3.78694	somatic	0	1.46096074547957e-06	5.7610379822215e-05
10	38527016	38529579	21	gain	AAAAAAAAAAAAAAAAAAAAB	1.514	germline	1	0.0832689048850792	0.270044505136836
10	41828160	41843538	2	neutral	AA	6.98598	somatic	0	0.511324397388578	0.836952159808452
10	41856353	41915302	28	gain	AAAAAAAAAAAAAAAAAAABBBBBBBBB	7.53738	germline	1	9.63738519661063e-07	2.25150895705184e-07
10	46515887	46559458	5	gain	AAABB	0.715012	germline	1	1.97563507938256e-11	1.87627691161651e-13
10	56980616	56993431	3	gain	-	-1	germline	1	0.000113887046478766	0.000105979501499154
10	59297568	59307820	2	neutral	AA	100	germline	1	0.833150674796614	0.959691281924625
10	66350944	66363759	2	neutral	AA	34.7653	germline	1	0.154672370961307	0.358850666238008
10	77148863	77382096	2	neutral	AA	88.7337	somatic	0	0.0690357754633876	0.0702592873141239
10	84145853	84812233	2	neutral	AA	16.7454	somatic	0	1.57557421626222e-10	6.5432048668157e-10
10	93652020	93695591	2	neutral	AA	36.5176	somatic	0	0.0833600735517236	0.195101779905103
10	128462686	128465249	7	gain	AAAABBB	7.62453	germline	1	0.0832726665277566	0.270051038305765
10	130459263	130546405	2	neutral	AA	9.04039	somatic	0	0.914512847113765	0.650502737566211
11	18922629	18940570	3	gain	-	-1	germline	1	4.60972102352658e-06	1.6712419447229e-06
11	50378328	50396269	3	gain	-	-1	germline	1	2.36842706447867e-05	1.56204021511952e-05
11	54930216	54937905	4	gain	AAAB	7.41969	germline	1	0.00270261752656529	0.00496249552651085
11	55183953	55214709	1	loss	A	-1	germline	1	7.38382354082201e-08	5.17507703357012e-09
11	61455614	61468429	2	neutral	AA	100	somatic	0	0.0360098602961148	0.0497827029393536
11	67104466	67235179	2	neutral	AA	30.5168	somatic	0	0.00194062123093814	0.0012210116730127
11	77092477	77110418	2	neutral	AA	36.4058	somatic	0	0.582459713128305	0.639447846823859
11	77223190	77266761	2	neutral	AA	54.6174	somatic	0	0.256363894176177	0.150969153462851
11	85893819	85909197	2	neutral	AA	36.3786	somatic	0	0.878213090751287	0.835238945529669
11	95904897	95927964	2	neutral	AA	54.5681	somatic	0	0.000852765357198755	0.00192342399430456
11	95974098	95979224	2	neutral	AA	100	somatic	0	0.0414511973592404	0.0893090405276529
11	106807899	106815588	2	neutral	AA	100	somatic	0	0.905941044075997	0.999900881068797
11	112356794	112436247	2	neutral	AA	54.6088	somatic	0	0.00185471285902644	0.0100417650099071
11	119033409	119148744	2	neutral	AA	58.0831	somatic	0	0.357754339445698	0.089572610501787
11	127375974	127388789	3	gain	AAB	16.7466	germline	1	0.000108058709366524	9.15755292891784e-05
11	134742036	135057285	3	gain	AAB	4.98643	somatic	0	4.13579974570914e-27	0
11	135057285	135075226	3	gain	-	-1	somatic	0	2.70665674233675e-05	1.85938217986958e-05
11	135075226	135086622	3	gain	AAB	-1	somatic	0	NA	NA
12	14465572	14586033	2	neutral	AA	100	somatic	0	0.000443758957373954	0.0013946193156148
12	24051192	24107578	2	neutral	AA	100	somatic	0	0.710122166374793	0.43681307057193
12	33234421	33242110	1	loss	A	-1	germline	1	0.00541054873600664	0.00808869937277323
12	40431325	40513341	2	neutral	AA	11.362	germline	1	0.00212033345501079	0.00653985996715556
12	50337320	50380891	2	neutral	AA	14.8074	germline	1	0.279775973882072	0.494266148314696
12	56014365	56419319	2	neutral	AA	100	somatic	0	2.39143993462571e-11	1.16662235427611e-11
12	65558977	65630741	2	neutral	AA	100	somatic	0	2.00423461412637e-06	1.63198943553544e-05
12	69800742	69857128	2	neutral	AA	100	germline	1	0.000476265026037183	0.00278883601453261
12	104798507	104801070	11	gain	AAAAAABBBBB	69.9234	somatic	0	0.0832695318159663	0.270045593990312
12	126509680	126522495	1	loss	A	-1	germline	1	0.000202962251339617	0.000158607486763329
12	130643799	130646362	6	gain	AAAABB	36.9955	germline	1	0.0832776822654547	0.270059749377142
12	131638243	131907358	2	neutral	AA	9.58117	somatic	0	2.70341525112681e-28	0
12	133017137	133242681	3	gain	AAB	0.794574	somatic	0	2.60068101265004e-53	0
12	133242681	133275309	3	gain	AAB	-1	somatic	0	NA	NA
13	20237448	20283582	2	neutral	AA	100	somatic	0	0.13741373435403	0.120041754181446
13	21155002	21160128	2	neutral	AA	100	somatic	0	0.664104832430528	0.927187443771656
13	21723988	21731677	2	neutral	AA	41.4312	somatic	0	0.962465239369611	0.889120725471957
13	22641542	22646668	2	neutral	AA	100	somatic	0	0.764348213190238	0.969547889999092
13	23141327	23143890	2	neutral	AA	100	somatic	0	0.193212840630951	0.427281621054004
13	27454856	27457419	2	neutral	AA	100	somatic	0	0.926314225654892	0.944292268774021
13	27629140	27634266	2	neutral	AA	100	somatic	0	0.104369704088442	0.187536117543135
13	29082361	29084924	2	neutral	AA	54.5678	somatic	0	0.244160008596642	0.486518932618956
13	29505256	29512945	2	neutral	AA	100	somatic	0	0.348855851702949	0.650798438634072
13	31240407	31291667	2	neutral	AA	54.8594	somatic	0	8.0883830568243e-07	6.86131919114263e-06
13	31673554	31704310	2	neutral	AA	54.5678	somatic	0	0.00105996519782973	0.0175403003491021
13	33342067	33344630	2	neutral	AA	54.5678	somatic	0	0.958093316489312	0.953415023798012
13	34339074	34349326	2	neutral	AA	54.8143	somatic	0	0.533398959164517	0.589791050131429
13	36817495	36820058	2	neutral	AA	100	somatic	0	0.692793213505645	0.845160879921237
13	37496690	37512068	1	loss	A	-1	germline	1	8.85978534893294e-05	4.10942322895957e-05
13	38306598	38334791	2	neutral	AA	100	somatic	0	0.220257771422501	0.453451429170779
13	39759819	39764945	2	neutral	AA	100	somatic	0	0.469644251137731	0.722837949141066
13	39772634	39836709	2	neutral	AA	77.2867	somatic	0	0.065786591755044	0.0776585527094987
13	41333501	41395013	2	neutral	AA	93.0966	somatic	0	9.6506455722356e-09	6.63593591410105e-07
13	43824737	43893938	2	neutral	AA	100	germline	1	0.133471140951242	0.265733735424898
13	44442420	44447546	2	neutral	AA	36.379	somatic	0	0.405161810939629	0.556555873045814
13	49112206	49114769	2	neutral	AA	100	somatic	0	0.898066328068481	0.935296930669493
13	52041715	52054530	2	neutral	AA	100	somatic	0	0.547803171213518	0.932444988830377
13	52672213	52674776	2	neutral	AA	100	somatic	0	0.448554670992924	0.679846807640614
13	58016068	58026320	1	loss	A	-1	germline	1	0.000960076149833985	0.00141691258356569
13	63029296	63031859	3	gain	AAB	4.69895	somatic	0	0.085216780457724	0.273412280777668
13	63060052	63062615	3	gain	AAB	6.16816	germline	1	0.0832977476635804	0.270094595713766
13	63062615	63067741	4	gain	AABB	5.01487	germline	1	0.0143956398955213	0.0368922112048661
13	65935738	65940864	2	neutral	AA	54.5678	somatic	0	0.212643485500856	0.24625983203718
13	67424841	67427404	2	neutral	AA	100	somatic	0	0.564113182974692	0.766056828946673
13	69236882	69272764	2	neutral	AA	31.6152	somatic	0	0.0148147692899471	0.0305029433308689
13	70631154	70641406	2	neutral	AA	54.5678	somatic	0	0.666751585109109	0.669133975201213
13	70810564	70813127	2	neutral	AA	100	somatic	0	0.914931771350088	0.940760967817019
13	71902402	71907528	1	loss	A	-1	germline	1	0.0146707432198674	0.0377117523683891
13	73340245	73345371	2	neutral	AA	100	somatic	0	0.960723464784832	0.924067120897215
13	73827215	73847719	2	neutral	AA	36.4692	somatic	0	0.372955168152921	0.483919437301998
13	75670012	75685390	2	neutral	AA	54.5678	somatic	0	0.286960852395814	0.215730878731986
13	77061721	77082225	2	neutral	AA	54.579	somatic	0	0.000650790154540929	0.0018276548555286
13	78015157	78038224	2	neutral	AA	65.1442	somatic	0	0.154948467801769	0.336262750701464
13	93669961	93787859	2	neutral	AA	38.7165	somatic	0	0.0195308513158134	0.00100549695108465
13	95945905	95948468	2	neutral	AA	100	somatic	0	0.964238993880768	0.955071596093396
13	96571277	96602033	2	neutral	AA	100	somatic	0	0.508772687805468	0.587928777413265
13	98506342	98539661	2	neutral	AA	54.5678	somatic	0	0.975026941689117	0.675527612329076
13	101248752	101259004	2	neutral	AA	100	somatic	0	0.370175726724423	0.588764918489081
13	106044125	106049251	2	neutral	AA	70.3248	somatic	0	0.274090069418919	0.434290290228959
13	106756639	106802773	2	neutral	AA	62.0822	somatic	0	0.0834243364975452	0.0774569799291185
13	106943738	106953990	1	loss	A	-1	germline	1	0.000693305504457071	0.00110603796834519
13	107235920	107243609	2	neutral	AA	36.3786	somatic	0	0.110483245674881	0.254341733739154
13	107835662	107838225	1	loss	A	-1	somatic	0	0.126687673898596	0.338806024769528
13	107966375	108017635	2	neutral	AA	83.8158	somatic	0	0.888220322754475	0.943885973120298
13	108873677	108909559	2	neutral	AA	54.5678	somatic	0	0.142350890203314	0.160154115693046
13	110726726	110770297	2	neutral	AA	100	somatic	0	0.0703438508223452	0.0485170228737074
13	113763881	113776696	3	gain	AAB	12.9524	somatic	0	0.000151965679417709	0.000171722088696535
13	114158583	114343119	3	gain	AAB	1.83887	somatic	0	1.65915590635576e-43	0
13	114343119	114364328	3	gain	AAB	-1	somatic	0	NA	NA
14	0	16093077	5	gain	AAAAB	-1	somatic	0	NA	NA
14	16093077	16095640	8	gain	-	-1	germline	1	0.0832714126315695	0.270048860569969
14	16095640	18489482	5	gain	AAAAB	-1	somatic	0	NA	NA
14	18492045	18658640	5	gain	AAAAB	-1	somatic	0	NA	NA
14	18658640	18661203	5	gain	AAABB	34.2556	germline	1	0.0832801902260753	0.270064104989746
14	18661203	18681707	5	gain	AAAAB	-1	somatic	0	NA	NA
14	18681707	18694522	3	gain	AAB	16.5272	germline	1	0.000533349438146558	0.000672870230520206
14	18694522	19727411	5	gain	AAAAB	-1	somatic	0	NA	NA
14	19727411	19955518	5	gain	AAAAB	1.98533	germline	1	6.84798476947014e-30	0
14	19955518	19958081	3	gain	AAB	18.3869	germline	1	0.0833027646249848	0.270103307810707
14	25201979	25460842	2	neutral	AA	100	somatic	0	0.19285282315624	0.0126888345692768
14	31668428	31735066	2	neutral	AA	100	somatic	0	0.0810259529170605	0.158727464824134
14	38450126	38470630	2	neutral	AA	100	somatic	0	0.125201395689954	0.158567082623577
14	49019938	49022501	0	loss	-	-1	germline	1	0.0832883415206378	0.270078261084859
14	50250178	50260430	1	loss	A	-1	germline	1	0.00182989806619815	0.00165831613415224
14	52305704	52364653	2	neutral	AA	91.994	somatic	0	2.75716876847018e-05	0.000262693073361797
14	57380444	57659811	2	neutral	AA	18.1459	somatic	0	0.748684405829025	0.0432816862003184
14	64262099	64269788	2	neutral	AA	54.6587	germline	1	0.529643687115057	0.799193932528418
14	73535033	73568352	1	loss	A	-1	germline	1	0.001570298623272	0.00151270273632464
14	76269754	76274880	2	neutral	AA	36.3785	somatic	0	0.143489132783736	0.173651671611602
14	77558943	77807554	2	neutral	AA	100	somatic	0	0.0482448444830805	0.0790876749838663
14	84263751	84545681	2	neutral	AA	100	germline	1	1.97975723205628e-11	2.5608637432839e-09
14	99926244	99928807	7	gain	AAAAABB	18.6094	germline	1	0.0832726665277566	0.270051038305765
14	101951014	101961266	1	loss	A	-1	germline	1	0.00150285798406126	0.00168479959040446
14	104198765	104216706	2	neutral	AA	5.57494	somatic	0	0.600363127470416	0.601307624816679
14	105349552	105480265	2	neutral	AA	9.43175	somatic	0	1.23492550617779e-15	8.43769498715119e-15
15	0	17079832	7	gain	-	-1	somatic	0	NA	NA
15	17079832	17082395	12	gain	-	-1	germline	1	0.0832695318159663	0.270045593990312
15	17082395	20339968	7	gain	-	-1	somatic	0	0.227313711262807	0.486363885493971
15	20339968	20342531	19	gain	-	-1	germline	1	0.0832689048850792	0.270044505136836
15	20342531	22221210	7	gain	-	-1	somatic	0	9.50665895349645e-15	0
15	22221210	22277596	4	gain	AAAB	9.63687	somatic	0	2.0420403575911e-07	3.06404946970318e-08
15	23461702	23477080	2	neutral	AA	16.5684	somatic	0	0.210124518827943	0.196496981302424
15	25750461	25758150	2	neutral	AA	36.3787	germline	1	0.270435873619066	0.673494313362715
15	27306202	27308765	0	loss	-	-1	somatic	0	0.0832732934815857	0.270052127178479
15	38227145	38232271	2	neutral	AA	70.3243	somatic	0	0.491608898174707	0.781191981190056
15	41136150	41200225	2	neutral	AA	75.2603	somatic	0	0.16810429975103	0.0287863702533896
15	47328358	47351425	2	neutral	AA	54.5678	somatic	0	0.561387021157163	0.613794081824016
15	55837518	55886215	2	neutral	AA	100	somatic	0	0.891216521527699	0.214981693196549
15	56496209	56509024	1	loss	A	-1	germline	1	0.000431939118614661	0.00027547814483464
15	60397095	60417599	2	neutral	AA	100	somatic	0	0.105975954636966	0.394647830878743
15	60858435	60868687	2	neutral	AA	27.2839	germline	1	0.250959305280721	0.516763421271417
15	63495762	63500888	2	neutral	AA	100	somatic	0	0.405220820406982	0.540441405403679
15	65223224	65330870	2	neutral	AA	100	somatic	0	0.00341010214946517	0.000722085769419678
15	69285579	69380410	2	neutral	AA	99.0692	somatic	0	0.145930667066361	0.117919029298892
15	74432083	74483343	2	neutral	AA	36.4139	somatic	0	0.893779610967894	0.756131713935649
15	76592692	76602944	1	loss	A	-1	germline	1	0.00147202046593974	0.00152795458693111
15	94039033	94054411	2	neutral	AA	4.46109	germline	1	0.0101633583231651	0.0155932115638741
15	98416637	98457645	2	neutral	AA	100	germline	1	0.0706163665738693	0.0244479627577323
15	100964259	101856183	3	gain	AAB	0.607061	somatic	0	2.2809419160056e-191	0
15	101856183	101858746	3	gain	-	-1	somatic	0	0.0842996889805583	0.271830157088277
15	101858746	101991189	3	gain	AAB	-1	somatic	0	NA	NA
16	538230	543356	2	neutral	AA	100	somatic	0	0.0221505346132824	0.0599148002958231
16	543356	602305	2	neutral	AA	86.6685	somatic	0	0.000265256060881309	0.000430042585960133
16	1025200	1027763	6	gain	AAAABB	37.6108	somatic	0	0.0832783092498741	0.270060838275485
16	4057229	4100800	2	neutral	AA	100	somatic	0	0.61305035675744	0.0981978411926298
16	8660377	8662940	0	loss	-	-1	somatic	0	0.083285833361171	0.270073905305601
16	13027729	13032855	2	neutral	AA	100	somatic	0	0.895447418602271	0.987471030151107
16	21557393	21583023	4	gain	AAAB	13.4145	germline	1	4.33268275509051e-08	4.1340565415382e-09
16	22613349	22687676	4	gain	AAAB	2.2145	germline	1	4.98791362987302e-20	0
16	22687676	22697928	4	gain	AABB	12.1281	germline	1	0.000532578597442437	0.000671481984399369
16	23036244	23038807	1	loss	A	-1	somatic	0	0.0833278531036435	0.270146871372177
16	25327566	25332692	1	loss	A	-1	somatic	0	0.0143445985668453	0.0367226019868372
16	34062270	34064833	23	gain	AAAAAAAAAAAAAAABBBBBBBB	18.2381	germline	1	0.0832689048850792	0.270044505136836
16	34082774	34085337	11	gain	AAAAAAABBBB	28.68	germline	1	0.0832695318159663	0.270045593990312
16	34085337	34095589	2	neutral	AA	23.0128	germline	1	0.0260995993504905	0.071171924413364
16	34095589	34098152	9	gain	AAAAAABBB	2.38865	germline	1	0.0832707856892114	0.270047771706879
16	34098152	34100715	4	gain	AABB	100	germline	1	0.0832889685700648	0.270079350037677
16	34210924	34213487	3	gain	AAB	1.88553	somatic	0	0.0832952392746626	0.270090239742214
16	34218613	34954194	2	neutral	AA	0.717312	somatic	0	0.0245064316429101	0.224607572438818
16	34956757	34959320	2	neutral	AA	3.12464	germline	1	0.467063293892707	0.694636149329083
16	35230998	35523180	3	gain	AAB	3.8851	germline	1	1.29787831976922e-68	0
16	36122922	36125485	5	gain	-	-1	germline	1	0.0832808172257901	0.27006519390091
16	48474019	48479145	1	loss	A	-1	germline	1	0.0198684441757713	0.0536985240760068
16	52923387	52979773	2	neutral	AA	100	somatic	0	0.231944130801277	0.17768274087735
16	55491513	55496639	2	neutral	AA	100	somatic	0	0.268048801400225	0.410092377846398
16	55786258	55788821	0	loss	-	-1	germline	1	0.0832689048850792	0.270044505136845
16	58051950	58067328	2	neutral	AA	54.5678	somatic	0	0.296803848565918	0.410555376819926
16	70149310	70162125	4	gain	AABB	13.0314	germline	1	0.000107637029190931	9.08857358202786e-05
16	76508113	76510676	0	loss	-	-1	germline	1	0.0832833252628888	0.270069549577621
16	78338095	78350910	1	loss	A	-1	germline	1	0.000193796410814754	0.00018815471291489
16	80942103	80949792	1	loss	A	-1	germline	1	0.00399854716910674	0.00742287183129398
16	81718692	81731507	2	neutral	AA	30.0097	somatic	0	0.250472854511769	0.368600470395752
16	88492701	88502953	2	neutral	AA	62.577	germline	1	0.158378948171679	0.243123303853404
17	12594582	12622775	2	neutral	AA	27.2881	somatic	0	0.014212557761558	0.00588257105013545
17	19307079	19353213	2	neutral	AA	100	somatic	0	0.23243732852389	0.16658027788253
17	21290841	21303656	4	gain	AABB	0.262507	germline	1	0.000107665556748208	9.09005180146361e-05
17	21852138	21859827	4	gain	-	-1	germline	1	0.00270202235792882	0.0049607405021711
17	21859827	21885457	3	gain	-	-1	somatic	0	3.86668169035991e-07	1.92513593610943e-06
17	21885457	21967473	0	loss	-	-1	germline	1	2.13199367727723e-22	0
17	21967473	21977725	16	gain	-	-1	germline	1	0.0143074610230642	0.0366337337182109
17	21977725	21990540	7	gain	-	-1	germline	1	0.000532247559723259	0.00067121994052266
17	22123816	22159698	5	gain	AAABB	0.151489	somatic	0	4.2491382534855e-10	1.02454711381483e-11
17	26808980	26826921	4	gain	-	-1	somatic	0	2.47229784689641e-05	1.87257552034525e-05
17	26865366	26867929	7	gain	-	-1	germline	1	0.0832726665277566	0.270051038305765
17	26937130	26939693	12	gain	AAAAAAAABBBB	2.52586	germline	1	0.0832695318159663	0.270045593990312
17	41138713	41179721	2	neutral	AA	18.7902	somatic	0	0.0107646419642202	0.00353941838714078
17	41817908	41861479	2	neutral	AA	35.4602	somatic	0	0.0114345014662961	0.0211468693324759
17	42158787	42174165	2	neutral	AA	100	somatic	0	0.649357920519352	0.837469118813177
17	52587634	52603012	2	neutral	AA	100	somatic	0	0.222749835240355	0.384700199835239
17	54081863	54089552	1	loss	A	-1	somatic	0	0.00359941598419096	0.0067566698740813
17	56790954	56808895	2	neutral	AA	9.22412	germline	1	0.161519281843083	0.230322717048111
17	61934895	62006659	2	neutral	AA	28.0505	somatic	0	0.95038917814685	0.866893695948762
17	67722149	67752905	2	neutral	AA	100	somatic	0	0.863531961396272	0.331887351047327
17	68016894	68032272	2	neutral	AA	100	somatic	0	0.249308759707118	0.0915550086358798
17	68132229	68145044	2	neutral	AA	36.3787	germline	1	0.837423508821286	0.965171120394227
17	68552561	68652518	2	neutral	AA	27.9175	somatic	0	0.00671770230798816	0.00176177868544591
17	74560233	74614056	2	neutral	AA	35.0834	somatic	0	0.055579609412991	0.00707389277374526
17	75193294	75231739	2	neutral	AA	54.5679	germline	1	0.143624468258735	0.35654917481309
17	78591832	78640529	2	neutral	AA	21.9569	germline	1	0.00222082888300667	0.00499641266163287
17	80742189	80755004	2	neutral	AA	2.38465	germline	1	0.074898333793725	0.239392163228607
17	81995496	82010874	2	neutral	AA	100	somatic	0	0.00882670360271046	0.0407032832454484
17	83200106	83202669	3	gain	-	-1	somatic	0	0.0881142802204449	0.27836126599912
18	0	463903	3	gain	-	-1	somatic	0	2.51555607230554e-80	0
18	630498	648439	1	loss	A	-1	germline	1	3.99938185829853e-05	1.55161320121167e-05
18	49937492	49965685	2	neutral	AA	72.6995	somatic	0	0.711074586892406	0.0557917060761129
18	51844364	51926380	2	neutral	AA	53.7142	somatic	0	0.351021531020842	0.153732202189935
18	58187789	58205730	2	neutral	AA	100	somatic	0	0.148274876033476	0.213801073970508
18	59125847	59174544	2	neutral	AA	100	somatic	0	0.219385509022252	0.112214630167483
18	68465419	68470545	2	neutral	AA	62.232	somatic	0	0.191240986550956	0.220204943498922
18	76200553	76223620	2	neutral	AA	82.471	germline	1	0.00260448703483207	0.0192411303228811
18	79199263	79201826	4	gain	AABB	10.6106	germline	1	0.0832839522817234	0.2700706385048
18	79970726	80260345	3	gain	AAB	1.33702	somatic	0	2.13883771299551e-67	0
18	80260345	80373285	3	gain	AAB	-1	somatic	0	NA	NA
19	4613400	4646719	2	neutral	AA	36.3786	somatic	0	0.0217547647440892	0.0196563322533322
19	6138385	6161452	2	neutral	AA	36.0943	somatic	0	0.00735636232202346	0.0301707257310516
19	7196904	7243038	2	neutral	AA	100	germline	1	1.32079802845095e-07	1.50549556710011e-07
19	7448078	7450641	4	gain	AAAB	15.7595	germline	1	0.0832952392746626	0.270090239742214
19	7450641	7453204	7	gain	AAAAAAB	52.9795	germline	1	0.0832745474007152	0.270054304933495
19	8880795	8911551	2	neutral	AA	1.00211	germline	1	0.0567314994735349	0.0928911400522425
19	15580477	15649678	2	neutral	AA	16.7596	somatic	0	2.59284605246042e-05	2.51052144273345e-06
19	15675308	15677871	2	neutral	AA	-1	somatic	0	NA	NA
19	15677871	15862407	2	neutral	AA	100	somatic	0	6.0422710232267e-06	1.24026359257234e-05
19	19950392	20032408	2	neutral	AA	54.3475	somatic	0	0.0323383275433177	0.110889126351318
19	21562519	21565082	2	neutral	AA	1.57641	germline	1	0.635197010330734	0.811927834221945
19	21565082	21575334	3	gain	AAB	6.35669	somatic	0	0.00300331339840658	0.00582588615561086
19	21575334	21588149	2	neutral	AA	0.8212	germline	1	0.761060412082729	0.926980106153342
19	23584726	23623171	2	neutral	AA	100	germline	1	0.00030753597071621	0.00169998964417928
19	23623171	23625734	0	loss	-	-1	germline	1	0.0832676510347758	0.270042327439507
19	24330559	24404886	4	gain	AABB	0.171784	germline	1	2.27418852983437e-19	0
19	27244690	27336958	2	neutral	AA	1.12483	germline	1	0.00543271538695846	0.0016573636046251
19	27336958	27342084	3	gain	AAB	1.60974	germline	1	0.0143191378145512	0.036656678277519
19	27344647	27347210	4	gain	AABB	3.70292	germline	1	0.0832864603953016	0.270074994245599
19	27347210	27380529	6	gain	AAAABB	0.14134	germline	1	9.23159835376979e-09	5.58655122162577e-10
19	27380529	27383092	3	gain	AAB	8.54268	germline	1	0.0836262469181939	0.270664580712804
19	27383092	27388218	6	gain	AAAABB	0.624529	germline	1	0.0143100331536917	0.0366373086669328
19	27388218	27393344	4	gain	AAAB	5.12459	germline	1	0.0143118140984496	0.0366405859713986
19	27393344	27398470	6	gain	AAAABB	0.683974	germline	1	0.0143100331536917	0.0366373086669328
19	27398470	27401033	3	gain	AAB	4.22765	germline	1	0.0833196986768266	0.270132712652219
19	27470234	27472797	0	loss	-	-1	germline	1	0.0832921038745613	0.270084794849893
19	28385225	28400603	2	neutral	AA	100	somatic	0	0.140433195448796	0.236534803383742
19	29510382	29515508	1	loss	A	-1	germline	1	0.0206371213093714	0.0560401695103091
19	44755106	44783299	2	neutral	AA	21.8274	somatic	0	7.10014621049243e-05	4.32893731943107e-05
19	46051984	46244209	2	neutral	AA	10.9844	somatic	0	0.00400996206196138	0.000806449471677739
19	46941345	47220712	2	neutral	AA	67.3398	somatic	0	4.64350196056091e-05	0.000114560531679686
19	47220712	47492390	2	neutral	AA	50.9449	somatic	0	7.46097046247554e-20	0
19	48468893	48491960	2	neutral	AA	73.4055	somatic	0	0.033658253822621	0.0959450986237704
19	48668807	48758512	2	neutral	AA	6.27087	somatic	0	6.51127961395653e-06	8.88221125205924e-07
19	55629915	55788821	2	neutral	AA	29.442	somatic	0	0.000292291665733111	0.00179038592347081
19	55875963	55891341	2	neutral	AA	52.1523	somatic	0	0.576048850718161	0.294985288176315
19	58269805	58280057	2	neutral	AA	100	germline	1	0.013047622421073	0.0738857467954263
20	0	64075	3	gain	AAB	-1	somatic	0	NA	NA
20	64075	66638	7	gain	-	-1	germline	1	0.0832726665277566	0.270051038305765
20	66638	79453	3	gain	-	-1	somatic	0	0.000107951922583463	9.11873742592828e-05
20	79453	248611	3	gain	AAB	21.9724	somatic	0	1.2464533708638e-35	0
20	248611	253737	3	gain	-	-1	somatic	0	0.0158225266975479	0.0389052235104074
20	1576245	1601875	1	loss	A	-1	germline	1	2.96434314647365e-06	2.13304932383807e-07
20	21306219	21308782	0	loss	-	-1	germline	1	0.0832864603953016	0.270074994245608
20	22108438	22116127	2	neutral	AA	100	somatic	0	0.669868753599087	0.543427984242017
20	26332262	26375833	2	neutral	AA	31.4392	germline	1	0.433738143058443	0.529257862630396
20	26375833	26380959	3	gain	-	-1	somatic	0	0.015364066342813	0.0398055811749493
20	28779927	28787616	6	gain	-	-1	germline	1	0.0143095384815102	0.036638798318985
20	28802994	28823498	9	gain	-	-1	germline	1	4.59539296067067e-06	1.66417015035059e-06
20	28836313	28838876	3	gain	-	-1	germline	1	0.0833059003501569	0.270108752975455
20	28869632	28872195	6	gain	-	-1	germline	1	0.0832764283080875	0.270057571590068
20	28954211	29313031	3	gain	-	-1	somatic	0	8.92152919053735e-14	2.84994250421278e-13
20	29407862	29410425	5	gain	-	-1	germline	1	0.0832808172257901	0.27006519390091
20	29876891	29879454	7	gain	-	-1	germline	1	0.0832758013351396	0.270056482701339
20	29889706	29894832	4	gain	-	-1	germline	1	0.0143131994128763	0.0366438635323604
20	30937973	30943099	5	gain	-	-1	germline	1	0.014310428902298	0.0366385003843351
20	31166080	31168643	5	gain	-	-1	germline	1	0.0832808172257901	0.27006519390091
20	31168643	31184021	3	gain	-	-1	somatic	0	5.82688658290717e-05	8.99698111094249e-05
20	31184021	31189147	16	gain	-	-1	germline	1	0.0143076588647862	0.0366343295218021
20	31189147	31240407	3	gain	AAB	1.9934	germline	1	2.05755987860087e-06	4.53619050888587e-06
20	31240407	31242970	48	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	36.3628	germline	1	0.0832670241153596	0.270041238595637
20	31242970	31245533	3	gain	AAA	3.95903	germline	1	0.0833240894417112	0.270140336511041
20	34654323	34656886	0	loss	-	-1	somatic	0	0.083281444229329	0.270066282815287
20	36384348	36394600	2	neutral	AA	100	somatic	0	0.433419221468992	0.238186317278289
20	47497516	47502642	2	neutral	AA	54.5678	somatic	0	0.104938447106229	0.163224341562408
20	50680762	50685888	2	neutral	AA	100	somatic	0	0.56404609855184	0.508007003015821
21	7917107	7919670	6	gain	-	-1	germline	1	0.0832776822654547	0.270059749377142
21	7919670	7924796	5	gain	-	-1	germline	1	0.0143111214855899	0.0366390962557546
21	8988441	8996130	8	gain	AAAAAABB	1.02802	germline	1	0.00270038175575877	0.00495819975145206
21	10654391	10656954	5	gain	AAAAA	3.91575	germline	1	0.0832801902260753	0.270064104989746
21	10656954	10669769	4	gain	AABB	32.4836	germline	1	0.000107659989835437	9.0913454308339e-05
21	10669769	10690273	3	gain	AAB	0.858675	germline	1	4.61444780023207e-06	1.67648131632614e-06
21	10690273	10692836	36	gain	AAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBB	100	germline	1	0.0832682779580158	0.270043416286564
21	10692836	10695399	18	gain	AAAAAAAAAAAAABBBBB	100	germline	1	0.0832689048850792	0.270044505136836
21	10695399	10703088	3	gain	AAB	2.4447	germline	1	0.00270586601017076	0.00496897588631251
21	10703088	10708214	5	gain	AAAAA	1.15584	germline	1	0.0143108246605586	0.0366385003843351
21	10708214	10715903	3	gain	AAB	3.04181	germline	1	0.00270285201982549	0.00496182976063597
21	10715903	10721029	5	gain	AAABB	1.19824	germline	1	0.0143107257200883	0.036638798318985
21	10721029	10731281	3	gain	AAB	1.5018	germline	1	0.000532808694475149	0.000671613042300123
21	10731281	10733844	5	gain	AAABB	26.4729	germline	1	0.0832808172257901	0.27006519390091
21	10733844	10738970	3	gain	AAB	4.45995	germline	1	0.0143252764460409	0.0366635342854637
21	10751785	10754348	10	gain	AAAAAAABBB	11.3199	germline	1	0.0832701587506771	0.270046682846993
21	13935031	13937594	2	neutral	AA	100	germline	1	0.143480921400175	0.362668193742695
21	19917073	19968333	2	neutral	AA	98.9871	somatic	0	0.0538065764883496	0.18348103476972
21	20445051	20491185	2	neutral	AA	92.9561	somatic	0	0.00203008564265141	0.00163889324676525
21	20586016	20588579	1	loss	A	-1	somatic	0	0.0841253869613596	0.271529401547697
21	22887590	22900405	2	neutral	AA	54.8425	somatic	0	0.240871809665607	0.360605299378019
21	24720135	24740639	2	neutral	AA	100	somatic	0	0.947954109726094	0.460658557568955
21	25899115	25952938	2	neutral	AA	27.2996	somatic	0	0.951087077146932	0.55108073288319
21	33401016	33647064	2	neutral	AA	28.6984	somatic	0	0.00376506469007693	0.0286298876969538
21	41805093	41807656	3	gain	AAA	68.2384	somatic	0	0.0833077818311544	0.270112020112763
21	43278818	43281381	1	loss	A	-1	somatic	0	0.0972148283628204	0.293478619936335
21	43335204	43337767	3	gain	AAA	5.81128	somatic	0	0.0833021374914239	0.270102218787372
21	45339470	45395856	2	neutral	AA	18.4981	somatic	0	0.0005003744927702	0.000264301329983785
21	45552199	45557325	1	loss	A	-1	somatic	0	0.0284702169858301	0.0573195087322034
21	45795684	45798247	4	gain	AAAA	13.6609	germline	1	0.0832864603953016	0.270074994245599
21	46082740	46121185	2	neutral	AA	9.07192	somatic	0	4.6164028578459e-06	4.09065359863181e-06
21	46677356	46679919	3	gain	-	-1	somatic	0	0.0856667945243211	0.274184379538485
22	11213125	11215688	5	gain	-	-1	somatic	0	0.0832826982478782	0.270068460653629
22	11620642	11630894	3	gain	AAA	100	germline	1	0.00270267163874454	0.00496086152006414
22	12691976	12694539	13	gain	AAAAAAAAABBBB	69.5332	germline	1	0.0832695318159663	0.270045593990312
22	15934171	15936734	3	gain	-	-1	somatic	0	0.0833435365106172	0.270174101202148
22	17874362	17879488	3	gain	AAB	10.3929	germline	1	0.0150463712584701	0.0388227227806549
22	18730404	18732967	40	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABB	100	germline	1	0.0832676510347758	0.270042327439498
22	18948259	18971326	2	neutral	AA	11.5249	germline	1	0.122203657872987	0.191208628095283
22	23289981	24533036	1	loss	A	-1	somatic	0	7.25892203036717e-149	0
22	26778224	26796165	2	neutral	AA	54.5678	somatic	0	0.443141416064406	0.59666792914895
22	29118243	29120806	4	gain	AAAA	13.5278	germline	1	0.0832889685700648	0.270079350037677
22	33357445	33365134	1	loss	A	-1	germline	1	0.00600789427050084	0.00991590266757791
22	34467224	34469787	1	loss	A	-1	somatic	0	0.0849271768457237	0.27291269154373
22	45006280	45039599	2	neutral	AA	27.3983	somatic	0	0.0022817784628849	0.00263833695807913
22	45326655	45329218	4	gain	AABB	55.4789	germline	1	0.0832952392746626	0.270090239742214
22	48689311	48727756	2	neutral	AA	20.8693	somatic	0	0.0998673370124927	0.00813066729594902
X	78268894	78271457	2	gain	-	-1	germline	1	0.556953993203321	0.761129943390351
X	79665729	79670855	0	loss	-	-1	germline	1	0.0143082524044319	0.0366346274267795
Y	10623635	10759474	2	gain	AB	3.16168	germline	1	0.00646102620868469	0.0121057213956008
Y	10759474	10764600	6	gain	-	-1	germline	1	0.0143101320899382	0.0366385003843351
Y	10764600	10774852	2	gain	-	-1	germline	1	0.163291875075156	0.207776675872958
Y	10774852	10777415	5	gain	-	-1	germline	1	0.0832801902260753	0.270064104989746
Y	10777415	10795356	2	gain	-	-1	germline	1	0.0932258085632734	0.0389528229389902
Y	10795356	10797919	6	gain	-	-1	germline	1	0.0832789362381173	0.270061927177034
Y	10797919	10803045	3	gain	-	-1	germline	1	0.014434424715082	0.0370089704495304
Y	10803045	10923506	2	gain	-	-1	germline	1	5.32311173077438e-08	9.6401775451227e-12
Y	10923506	10928632	3	gain	-	-1	germline	1	0.0143195337852588	0.0366572744075909
Y	10928632	10985018	2	gain	-	-1	germline	1	0.128900347662947	0.0137333352391898
Y	10985018	10990144	7	gain	-	-1	germline	1	0.0143097363485727	0.0366402880240304
Y	10990144	10997833	2	gain	-	-1	germline	1	0.681213243600356	0.694620059449609
Y	10997833	11000396	7	gain	-	-1	germline	1	0.0832745474007152	0.270054304933495
Y	11013211	11015774	14	gain	-	-1	germline	1	0.0832695318159663	0.270045593990312
Y	11015774	11041404	2	gain	AA	7.32615	germline	1	0.012211282355647	0.00666484097600584
Y	11290015	11305393	31	gain	AAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	4.98156	germline	1	2.20972922082795e-05	1.22917228213559e-05
Y	11305393	11333586	14	gain	AAAAAAAAABBBBB	15.5492	germline	1	4.5955392482676e-06	1.66445436211582e-06
Y	11530937	11533500	21	gain	AAAAAAAAAAAAAABBBBBBB	36.0027	germline	1	0.0832689048850792	0.270044505136836
Y	11687280	11689843	3	gain	AAA	23.5403	germline	1	0.0835199825302926	0.270480302293664
Y	11689843	11692406	6	gain	AAAABB	14.7128	germline	1	0.0832776822654547	0.270059749377142
Y	11720599	11725725	21	gain	AAAAAAAAAAAAABBBBBBBB	36.2158	germline	1	0.0143073621031082	0.0366334358195947
Y	11725725	11746229	2	gain	AA	14.7046	germline	1	0.441648128793091	0.046838841350462
Y	11746229	11748792	10	gain	AAAAAABBBB	6.27382	germline	1	0.0832707856892114	0.270047771706879
Y	26637259	26639822	5	gain	AAABB	9.90369	germline	1	0.0832808172257901	0.27006519390091
Y	56826836	56842214	16	gain	AAAAAAAAAAABBBBB	10.4771	germline	1	2.20994161995079e-05	1.22953217337463e-05
