chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5667714	5673198	3	gain	AAB	1.27714	somatic	0	0.000534811420300829	0.000675085922977603
1	16608294	16635714	8	gain	AAAAABBB	2.57027	germline	1	2.03791187794175e-07	3.05006997436408e-08
1	16716603	16724829	6	gain	AAAABB	13.4523	germline	1	0.000532545136967715	0.00067135595748824
1	16882494	16942818	3	gain	AAB	0.79703	germline	1	7.52355923310251e-16	0
1	25817301	25852947	2	neutral	AA	100	somatic	0	0.228544271850306	0.245118226475266
1	27886140	27986223	2	neutral	AA	51.9134	somatic	0	5.4318344908235e-08	2.71949832587604e-05
1	31431546	31432917	9	gain	AAAAAAAAA	4.31443	germline	1	0.0832795599061685	0.270063264845059
1	33459255	33575790	2	neutral	AA	54.5678	somatic	0	0.406306530671383	0.307389824530646
1	55662600	55668084	1	loss	A	-1	germline	1	0.000562777613209584	0.000765493168472964
1	61461930	61492092	2	neutral	AA	54.5678	somatic	0	0.921661396222641	0.746051502356162
1	72299685	72346299	1	loss	A	-1	germline	1	6.77120193003384e-22	0
1	74523447	74537157	2	neutral	AA	100	somatic	0	0.27422508013771	0.313868287035407
1	107112117	107127198	2	neutral	AA	100	somatic	0	0.412493601253343	0.474850201077735
1	125080443	125081814	9	gain	-	-1	germline	1	0.0832802285645106	0.270064426108895
1	125081814	125085927	3	gain	-	-1	germline	1	0.00270336781912722	0.00496219798429232
1	125162703	125166816	6	gain	-	-1	germline	1	0.00270198281688814	0.0049603264654815
1	152582703	152614236	1	loss	A	-1	germline	1	6.79580651281217e-15	0
1	158897529	158900271	0	loss	-	-1	somatic	0	0.0143099399066471	0.0366375655313077
1	159301974	159371895	2	neutral	AA	100	somatic	0	0.00881471633487517	0.0239118121627984
1	171092574	171095316	2	neutral	AA	100	somatic	0	0.210421629986132	0.531649086400517
1	171095316	171096687	5	gain	AAAAB	100	somatic	0	0.0832899245991941	0.270081264844121
1	178816788	178859289	2	neutral	AA	100	somatic	0	0.623377759566467	0.185705590700187
1	181598547	181715082	2	neutral	AA	100	somatic	0	3.53781709072718e-05	0.000322301940153147
1	189946566	189993180	2	neutral	AA	36.5447	somatic	0	0.608621619270239	0.678648969819423
1	193585200	193730526	2	neutral	AA	40.5341	somatic	0	0.0012895109351365	0.00198558373366664
1	195379839	195434679	2	neutral	AA	100	somatic	0	0.8136069087571	0.291538689696462
1	224013174	224014545	7	gain	AAAAAAA	1.97776	germline	1	0.0832862466852945	0.270074877647443
1	228067221	228072705	1	loss	A	-1	somatic	0	0.00076644594904049	0.00153049367913527
1	231342540	231387783	2	neutral	AA	73.3231	somatic	0	0.480200654677415	0.89389317681393
1	234776895	234782379	7	gain	AAAAABB	3.74708	germline	1	0.000532463368535505	0.000671326847857645
1	235332150	235362312	2	neutral	AA	100	germline	1	0.299540946689725	0.219199653517018
1	236095797	236098539	5	gain	AAAAB	94.2751	germline	1	0.0143150051491284	0.0366453504794406
1	248576010	248632221	1	loss	A	-1	germline	1	3.81055491775285e-21	0
2	30162	79518	3	gain	AAB	100	somatic	0	1.45366368553537e-23	0
2	3179349	3182091	6	gain	AAAAAA	2.48438	germline	1	0.0143131582629748	0.036644556030677
2	4165098	4176066	1	loss	A	-1	germline	1	3.06581769956242e-06	1.01368613081299e-06
2	7188153	7308801	2	neutral	AA	27.8055	somatic	0	0.0241194575817959	0.0330835760231631
2	7901073	7933977	2	neutral	AA	100	somatic	0	0.0159855911832731	0.0115681228411828
2	7988817	7997043	1	loss	A	-1	somatic	0	0.000122939695813651	5.93006224115511e-05
2	13575642	13674354	2	neutral	AA	21.4765	somatic	0	0.226266882794879	0.094042216444829
2	16147638	16149009	5	gain	AAAAB	100	somatic	0	0.0832905933249471	0.270082426164454
2	25891335	25943433	2	neutral	AA	100	somatic	0	8.69506525668154e-05	0.000381024893598259
2	28235745	28259052	2	neutral	AA	36.3786	somatic	0	0.289670858749799	0.208108554998326
2	29687634	29752071	2	neutral	AA	59.886	somatic	0	0.0353499067797074	0.0452380034646521
2	49306644	49312128	1	loss	A	-1	somatic	0	0.00124766154053107	0.00155084415329254
2	50790066	51826542	2	neutral	AA	11.4065	somatic	0	0.0803654230588833	0.00181647146384945
2	86123478	86127591	2	neutral	AA	100	somatic	0	0.676320364101056	0.426052390065818
2	89773080	89774451	4	gain	-	-1	germline	1	0.0832959432875459	0.270091716858336
2	89774451	89781306	7	gain	-	-1	germline	1	0.000107635750146482	9.08712491822783e-05
2	89781306	89790903	4	gain	-	-1	germline	1	0.000107678790059209	9.08988346315365e-05
2	89795016	89815581	4	gain	AAAB	62.0426	germline	1	4.25527331644123e-10	1.02505781640616e-11
2	89815581	89818323	2	neutral	AA	14.5385	somatic	0	0.0876322400764131	0.284611681581541
2	89818323	89821065	5	gain	AAABB	30.3786	germline	1	0.0143146357550811	0.0366453504794406
2	89822436	89825178	3	gain	AAA	18.7471	germline	1	0.0143374484040577	0.0366916133654194
2	89825178	89841630	18	gain	AAAAAAAAAAAAAAAAAA	1.2929	germline	1	1.97557741355615e-09	7.56422702252735e-11
2	89841630	89851227	4	gain	AABB	8.39409	germline	1	4.60486247908475e-06	1.66665785517051e-06
2	91411425	91415538	4	gain	-	-1	germline	1	0.00270235785762549	0.0049604232523085
2	120945507	120985266	2	neutral	AA	21.8271	somatic	0	0.000473756945005825	0.00138673697119529
2	122718210	122725065	1	loss	A	-1	somatic	0	0.00056428235125841	0.000919335503917429
2	124510107	124634868	2	neutral	AA	63.5731	somatic	0	0.992385560671329	0.373824851373053
2	128882226	128889081	1	loss	A	-1	germline	1	0.000286142870013873	0.000271139263857689
2	132243918	132246660	4	gain	AABB	15.2274	somatic	0	0.0201096285375033	0.054548024612103
2	132252144	132398841	2	neutral	AA	1.22535	somatic	0	0.797900636455655	0.745146101019211
2	137467428	137651142	2	neutral	AA	55.0709	somatic	0	0.684817793525484	0.546033912644159
2	161464041	161472267	2	neutral	AA	100	somatic	0	0.00881473314292143	0.0238879985652566
2	161472267	161477751	1	loss	A	-1	somatic	0	0.0209848826814119	0.0953479996046381
2	161477751	161488719	2	neutral	AA	100	somatic	0	0.0102877910985247	0.0392977867693189
2	163680948	163698771	2	neutral	AA	36.3786	somatic	0	0.368301469563047	0.417253603144386
2	172041306	172045419	1	loss	A	-1	germline	1	0.00332421735427255	0.00708830321614318
2	198257568	198278133	2	neutral	AA	27.569	somatic	0	0.911215128981468	0.520512604869134
2	207580368	207666741	2	neutral	AA	100	somatic	0	0.112847005565072	0.0812874772219244
2	215053689	215419746	2	neutral	AA	57.5986	somatic	0	0.0309414663343579	0.0266363754102683
2	221160123	221201253	2	neutral	AA	36.7145	somatic	0	0.205619748951633	0.354138689855998
2	221751024	221779815	2	neutral	AA	36.3786	somatic	0	0.719094098567399	0.867504797900978
2	226300002	226306857	1	loss	A	-1	somatic	0	0.000395842153633808	0.000263968372685497
2	234650763	234674070	2	neutral	AA	54.5682	somatic	0	0.833376588633839	0.990803457956072
2	235511751	235600866	2	neutral	AA	16.4945	somatic	0	1.63231451791595e-05	7.45163847397645e-05
3	186456	193311	1	loss	A	-1	somatic	0	0.000554059021491289	0.000307954412456568
3	1575279	1610925	2	neutral	AA	54.5678	somatic	0	5.38862068332177e-05	0.000341634006726599
3	1739799	1746654	1	loss	A	-1	somatic	0	0.00038401931960403	0.000285805793378557
3	5493597	5497710	1	loss	A	-1	somatic	0	0.00574482546045823	0.00918348749090514
3	7818813	7947687	2	neutral	AA	100	somatic	0	0.508971061097816	0.282338105346345
3	11368332	11375187	1	loss	A	-1	somatic	0	0.000595320535025617	0.000522894593113499
3	19963131	20000148	2	neutral	AA	27.284	somatic	0	0.939035858395504	0.378068558585686
3	21261468	21334131	2	neutral	AA	100	somatic	0	0.00485739938524717	0.0256282895311376
3	26515140	26870229	2	neutral	AA	100	somatic	0	0.66138616143153	0.022505356407315
3	30388215	30400554	2	neutral	AA	54.5678	somatic	0	0.0207095908361299	0.0240453413480377
3	38782848	38796558	2	neutral	AA	100	somatic	0	0.0939427375236712	0.267627598082641
3	41793564	41833323	2	neutral	AA	36.3786	somatic	0	0.29704854841357	0.448492821229887
3	42080103	42114378	2	neutral	AA	100	somatic	0	0.160118313246918	0.109171002119229
3	46755213	46808682	1	loss	A	-1	germline	1	3.21687517651806e-16	0
3	47672412	47721768	2	neutral	AA	36.3786	somatic	0	0.0385791594740278	0.0897433355508359
3	52993263	53004231	1	loss	A	-1	germline	1	3.22630495109543e-06	1.19398159093009e-06
3	61150713	61202811	2	neutral	AA	27.2839	somatic	0	0.334508252286384	0.548604509524563
3	62938497	62997450	2	neutral	AA	36.6109	somatic	0	0.187320779897662	0.0576882429958975
3	65202018	65265084	2	neutral	AA	28.8329	germline	1	0.630294390181838	0.794117299068021
3	75669603	75760089	2	neutral	AA	0.682083	somatic	0	1.44331949835136e-06	2.90836109451131e-06
3	75760089	75768315	2	neutral	AA	-1	germline	1	NA	NA
3	75768315	76015095	2	neutral	AA	2.26918	somatic	0	0.358854420500086	0.573305917434272
3	80008818	80015673	1	loss	A	-1	somatic	0	0.00127695476305345	0.00908008079048983
3	80239146	80276163	2	neutral	AA	100	somatic	0	0.958938120819144	0.196085387173659
3	83992944	84021735	2	neutral	AA	100	somatic	0	0.795365331392307	0.97994307935517
3	90366723	90411966	2	neutral	AA	0.834914	germline	1	0.0044565946537089	0.0312572428224158
3	98687322	98694177	1	loss	A	-1	somatic	0	0.000403349019977267	0.000373601591602601
3	99179511	99186366	1	loss	A	-1	germline	1	0.00188682231200421	0.00555426437625994
3	99224754	99230238	1	loss	A	-1	somatic	0	0.0013072365499756	0.00151975609883059
3	99271368	99286449	2	neutral	AA	100	somatic	0	0.501966059001092	0.500371394922268
3	120125649	120364203	2	neutral	AA	41.5774	somatic	0	0.00864461939103226	0.00197791051512219
3	123820494	123875334	2	neutral	AA	64.784	germline	1	0.0830517130873156	0.0840943356398683
3	131988912	131994396	1	loss	A	-1	somatic	0	0.00145274726345966	0.00166864393778232
3	132154803	132189078	2	neutral	AA	36.4058	somatic	0	1.44335932789281e-06	2.10198701660058e-05
3	139370376	139460862	2	neutral	AA	54.5783	germline	1	1.93765831785931e-05	0.000328545772928179
3	143447730	143450472	1	loss	A	-1	somatic	0	0.0213688359207198	0.0585473768776595
3	146122551	146149971	2	neutral	AA	100	somatic	0	0.365824903797769	0.378337023974387
3	146236344	146255538	2	neutral	AA	100	somatic	0	0.87014845737486	0.954867635783248
3	150400071	150526203	2	neutral	AA	65.1442	somatic	0	2.90016697609201e-05	0.000689122016312882
3	152814402	152910372	2	neutral	AA	54.5678	somatic	0	1.02666824197275e-09	3.20837823752917e-07
3	156187062	156219966	2	neutral	AA	100	somatic	0	0.573118099998034	0.449093759375946
3	162793911	162907704	1	loss	A	-1	somatic	0	4.33411423235909e-42	0
3	163046175	163051659	1	loss	A	-1	germline	1	0.0163609311797803	0.0428683674983118
3	164559759	164577582	2	neutral	AA	100	somatic	0	0.0163190764069831	0.0102867219717638
3	166802715	166816425	3	gain	-	-1	germline	1	4.40640786681814e-08	4.36373548406976e-09
3	177257961	177262074	3	gain	AAB	100	somatic	0	0.00270599533338088	0.00496574919449466
3	183131325	183153261	2	neutral	AA	100	somatic	0	0.00601475815719659	0.00621000409924377
3	188790813	188804523	2	neutral	AA	100	somatic	0	0.0119451851689389	0.0375567957528886
3	191346357	191354583	1	loss	A	-1	germline	1	7.63288938613721e-05	4.5757726132245e-05
3	193157448	193168416	1	loss	A	-1	germline	1	4.55728787771358e-06	1.39979564495185e-06
3	196723419	196760436	2	neutral	AA	100	somatic	0	0.493639461532752	0.723808198878361
3	196763178	196768662	2	neutral	AA	36.629	somatic	0	0.0557700924189557	0.109690866302737
3	197382870	197389725	3	gain	AAB	5.02531	somatic	0	0.000473676279959515	0.0033856408966052
4	553884	556626	4	gain	-	-1	somatic	0	0.014316905022768	0.0366485284251912
4	7862685	7864056	8	gain	-	-1	germline	1	0.0832815658942416	0.270066748647502
4	10209837	10233144	1	loss	A	-1	germline	1	5.86468846439603e-11	1.40221168010157e-13
4	10390809	10400406	1	loss	A	-1	germline	1	1.67651494913478e-05	7.35975210652828e-06
4	40293690	40296432	4	gain	-	-1	germline	1	0.0143158495099548	0.0366467805251902
4	49709718	49711089	191	gain	-	-1	somatic	0	0.0832651848036824	0.27003829855419
4	63847470	63850212	1	loss	A	-1	somatic	0	0.0202271517672103	0.0549280072783429
4	68518467	68622663	1	loss	A	-1	germline	1	2.01326030968762e-34	0
4	91009722	91015206	1	loss	A	-1	germline	1	0.0145385646266121	0.037315611804282
4	93912129	93913500	9	gain	-	-1	somatic	0	0.0832808972272016	0.270065587376376
4	106134594	106142820	1	loss	A	-1	somatic	0	0.000117814605823591	5.06087019335189e-05
4	114253656	114261882	1	loss	A	-1	somatic	0	9.64859182846765e-05	4.24635257704198e-05
4	121360920	121369146	1	loss	A	-1	somatic	0	5.84395870255373e-05	4.8516662538467e-05
4	171453147	171458631	0	loss	-	-1	germline	1	0.0143116809053933	0.0366432849439956
4	172503333	172512930	1	loss	A	-1	germline	1	1.38775117670114e-05	6.37525841229447e-06
4	186172203	186177687	1	loss	A	-1	somatic	0	0.000966239414205809	0.00170587257256649
5	756792	777357	7	gain	AAAABBB	4.72737	somatic	0	2.2118667069446e-05	1.22994594745629e-05
5	1258578	1277772	2	neutral	AA	24.5262	somatic	0	6.91901879296599e-05	2.33663500160963e-05
5	2622723	2626836	2	neutral	AA	100	somatic	0	0.516139248194674	0.936563794841473
5	3145074	3149187	2	neutral	AA	100	somatic	0	0.505502699199897	0.74835015311857
5	3323304	3324675	5	gain	AAABB	12.8005	germline	1	0.0832899245991941	0.270081264844121
5	3659199	3667425	2	neutral	AA	5.41794	somatic	0	0.711891966867831	0.669287277002832
5	16158606	16168203	2	neutral	AA	100	somatic	0	0.61304452602956	0.716028916069104
5	17758563	17765418	2	neutral	AA	100	somatic	0	0.513446835232309	0.957710884655199
5	24047340	24114519	2	neutral	AA	54.5692	somatic	0	0.00939254040981902	0.0275460218445867
5	26382153	26390379	2	neutral	AA	100	somatic	0	0.329282759648851	0.406421601191307
5	30975003	30994197	2	neutral	AA	32.6553	somatic	0	0.481671312788316	0.807602093272364
5	34492989	34495731	2	neutral	AA	100	somatic	0	0.833932706491857	0.984472316892383
5	35857134	35887296	2	neutral	AA	100	somatic	0	0.995045423891646	0.562572136601477
5	38615586	38619699	2	neutral	AA	54.5678	somatic	0	0.371362614654632	0.709026326095446
5	44716536	44920815	2	neutral	AA	100	somatic	0	0.519377802715365	0.0987680584473428
5	54679593	54683706	2	neutral	AA	100	germline	1	0.767784518594572	0.53669073413447
5	55403481	55498080	2	neutral	AA	28.1187	somatic	0	0.554874102468899	0.40021728341142
5	68644599	68659680	2	neutral	AA	100	somatic	0	0.0147396420834639	0.00490619849427332
5	72291459	72305169	2	neutral	AA	36.3786	somatic	0	0.0748523353210303	0.204595466708046
5	73146963	73185351	2	neutral	AA	21.8037	somatic	0	0.144604497362089	0.164766798465181
5	78382812	78460959	2	neutral	AA	97.4951	somatic	0	0.10026614131348	0.0581045463899958
5	79949865	79952607	2	neutral	AA	100	somatic	0	0.439656236317936	0.536340995930558
5	80222694	80228178	2	neutral	AA	100	somatic	0	0.169427435897779	0.141199044942172
5	86418243	86422356	1	loss	A	-1	somatic	0	0.00651776145743852	0.0154533466129326
5	90431160	90960366	2	neutral	AA	33.7779	somatic	0	1.82089171954113e-09	6.34310942770888e-07
5	101381337	101545857	2	neutral	AA	100	somatic	0	0.682776897773226	0.187513467401247
5	103677762	103683246	2	neutral	AA	36.5028	somatic	0	0.18226779188625	0.339880604451771
5	105096747	105168039	1	loss	A	-1	germline	1	2.06909548009831e-31	0
5	105620469	105695874	2	neutral	AA	54.5678	somatic	0	0.746468860599196	0.402426521148746
5	106702188	106754286	2	neutral	AA	54.568	somatic	0	0.0907724409738872	0.0327969369169936
5	113166453	113195244	2	neutral	AA	100	germline	1	0.149204563095119	0.0520215423677334
5	113821791	113836872	1	loss	A	-1	germline	1	7.78699721791097e-08	5.20350562638328e-09
5	124292118	124296231	2	neutral	AA	100	somatic	0	0.396224479562178	0.415591390437182
5	131528256	131666727	2	neutral	AA	27.2839	somatic	0	0.227672410369976	0.153845425741121
5	135803034	135823599	2	neutral	AA	91.7926	somatic	0	0.397609994337535	0.27935957304685
5	140731779	140757828	2	neutral	AA	100	germline	1	0.00310868816394202	0.0204022081022388
5	141174612	141177354	4	gain	AAAB	39.8049	germline	1	0.0143160078325006	0.0366464627330264
5	149598036	149613117	2	neutral	AA	54.5686	somatic	0	0.405535923631537	0.398962839201537
5	151942446	151945188	2	neutral	AA	54.5678	somatic	0	0.889119479718175	0.911765234059215
5	154267662	154280001	2	neutral	AA	100	somatic	0	0.00574167620539497	0.00787241903370939
5	157951539	158052993	2	neutral	AA	36.898	somatic	0	0.00865360853564271	0.0563165433737409
5	159067533	159100437	2	neutral	AA	100	somatic	0	0.660781624359524	0.511547472811466
5	169814802	169833996	2	neutral	AA	100	germline	1	0.858126675590929	0.997492261795721
5	170908860	170918457	2	neutral	AA	100	somatic	0	0.652084947128906	0.779829742624358
5	171047331	171058299	2	neutral	AA	54.5678	somatic	0	0.538170686515081	0.541952959839418
5	174455637	174463863	2	neutral	AA	27.2839	somatic	0	0.0691415608407743	0.13124456608498
5	176654721	176660205	2	neutral	AA	54.5678	germline	1	0.973097113974617	0.994976415673317
5	178585089	178586460	8	gain	AAAAAAAA	6.63236	germline	1	0.083281231560178	0.270066168011484
6	256377	296136	3	gain	-	-1	germline	1	5.04167039586598e-20	0
6	296136	382509	4	gain	-	-1	germline	1	4.9522084349061e-41	0
6	2567883	2571996	1	loss	A	-1	somatic	0	0.00673964681290875	0.00951509457549238
6	3145074	3146445	0	loss	-	-1	somatic	0	0.0832892558777903	0.270080103527421
6	60236256	60240369	4	gain	-	-1	germline	1	0.00270450323507176	0.00496784873173672
6	73880448	73909239	1	loss	A	-1	germline	1	0.000684646780637596	0.000126707407013482
6	75531132	75555810	1	loss	A	-1	germline	1	4.06403198178014e-12	8.3144602314178e-13
6	76725273	76741725	1	loss	A	-1	germline	1	0.000111950068793949	3.91314223747719e-05
6	78809193	78817419	1	loss	A	-1	germline	1	0.000196549082101621	0.000383307802120481
6	88443210	88452807	3	gain	-	-1	germline	1	0.002513978756386	0.0033330709553766
6	140963478	141047109	2	neutral	AA	53.195	germline	1	0.102562509562117	0.256863938928979
6	151513323	151555824	2	neutral	AA	36.3786	somatic	0	0.924186069092424	0.734188343442029
6	152371569	152419554	2	neutral	AA	12.9244	somatic	0	0.580676689750983	0.76738701862241
6	157245474	157309911	2	neutral	AA	51.7157	germline	1	0.383438762601666	0.742489920981496
6	157309911	157311282	16	gain	AAAAAAAAAABBBBBB	27.1188	germline	1	0.08327187064781	0.270049910572919
6	157312653	157315395	8	gain	AAAAABBB	2.21663	germline	1	0.0143119447093813	0.036641855017596
6	157667742	157688307	2	neutral	AA	30.4447	somatic	0	0.145070628594777	0.514532919129318
6	160217802	160219173	4	gain	AAAB	23.0174	somatic	0	0.083304303161377	0.27010623403454
6	161873970	161875341	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
6	168659049	168660420	4	gain	AAAA	6.01374	somatic	0	0.0833002903371224	0.270099265718884
7	9761520	9765633	1	loss	A	-1	germline	1	0.00382226784469499	0.00927265226744789
7	23997984	24000726	0	loss	-	-1	somatic	0	0.0143286258259145	0.0366892274320996
7	29635536	29728764	3	gain	AAB	1.24511	germline	1	1.30719951865648e-10	2.84527956750935e-12
7	55478886	55591308	2	neutral	AA	100	somatic	0	0.8920162767876	0.82960040645316
7	57486030	57491514	2	neutral	AA	3.4705	somatic	0	0.316366473861718	0.303139006019552
7	57491514	57496998	3	gain	AAA	7.452	germline	1	0.000533467699936131	0.000672637953366029
7	61046517	61057485	3	gain	-	-1	germline	1	1.68250153684348e-06	3.48163979402294e-06
7	62296869	62380500	2	neutral	AA	0.816688	somatic	0	2.60540561097709e-15	7.7715611723761e-16
7	62401065	62406549	4	gain	-	-1	germline	1	0.000532699413819262	0.000671507346643674
7	62436711	62455905	3	gain	AAB	4.46483	germline	1	2.42821660400152e-08	1.68217405449589e-07
7	65795661	65823081	3	gain	AAB	0.141291	germline	1	9.78879708063703e-15	0
7	75724443	75742266	3	gain	AAB	17.3728	germline	1	4.39983890393372e-10	1.14867004796793e-11
7	90749232	90989157	2	neutral	AA	75.9795	somatic	0	0.000155134132739469	8.86269355162561e-05
7	93698253	93703737	1	loss	A	-1	somatic	0	0.00116213248739979	0.00166490173292111
7	100949472	100957698	3	gain	AAB	1.31848	germline	1	2.21757170022372e-05	1.23355084228338e-05
7	100957698	100959069	22	gain	AAAAAAAAAAAAAAAAAAAAAB	2.85701	germline	1	0.0832701991460096	0.270047007534066
7	100959069	100970037	4	gain	AABB	0.271596	germline	1	4.60483121641987e-06	1.6661520804151e-06
7	101259318	101285367	2	neutral	AA	2.39298	somatic	0	0.0107071428694145	0.00312481684274535
7	102112080	102250551	2	neutral	AA	49.9602	somatic	0	0.00032346473910666	8.6767232610363e-05
7	106100319	106101690	5	gain	-	-1	somatic	0	0.0832909276894546	0.270083006825987
7	110606796	110620506	3	gain	AAB	25.1214	germline	1	4.36470088748442e-08	4.19150791852729e-09
7	136809348	136825800	2	neutral	AA	100	somatic	0	0.122083747448893	0.112227745812458
7	149162058	149163429	1	loss	A	-1	somatic	0	0.129423736651206	0.342779533558933
7	152401731	152408586	12	gain	AAAAAAAAAABB	11.2568	germline	1	0.00010758790585825	9.087617457193e-05
7	154599444	154609041	1	loss	A	-1	germline	1	1.81280628941362e-05	9.11318028673502e-06
7	156505134	156521586	1	loss	A	-1	germline	1	9.75401663222623e-08	9.54203183134439e-09
7	158150334	158151705	5	gain	AAABB	6.18393	germline	1	0.0832939370189514	0.270088232820793
7	158240820	158244933	3	gain	-	-1	somatic	0	0.0645770698194748	0.140568593746227
8	4265181	4267923	0	loss	-	-1	germline	1	0.0143157967361161	0.036655679684761
8	25722702	25729557	3	gain	-	-1	germline	1	0.000107896464158628	9.10615533787906e-05
8	40326594	40332078	1	loss	A	-1	germline	1	0.000920055089419089	0.00131735939195909
8	43237227	43242711	13	gain	-	-1	germline	1	0.00053229429366738	0.000671332669689106
8	50118276	50126502	1	loss	A	-1	germline	1	8.17722587880054e-05	4.70567649694109e-05
8	59223087	59224458	5	gain	AAABB	100	germline	1	0.0832939370189514	0.270088232820793
8	80111643	80171967	2	neutral	AA	19.0635	somatic	0	0.47567327416876	0.677105656104851
8	86161866	86163237	10	gain	AAAAAABBBB	33.8299	somatic	0	0.0832788912521754	0.270062103584867
8	96347025	96399123	2	neutral	AA	100	somatic	0	0.0010426225610432	0.0110061706653705
8	100708176	100747935	2	neutral	AA	13.2492	somatic	0	0.019633504541927	0.0103367832304148
8	104674479	104700528	2	neutral	AA	100	germline	1	0.834641826587164	0.935178197819323
8	106523958	106536297	3	gain	AAB	5.70632	germline	1	2.0476026967693e-07	3.06606021682754e-08
8	120919458	120920829	53	gain	-	-1	somatic	0	0.0832675247996616	0.270042362719285
8	121230675	121262208	2	neutral	AA	100	somatic	0	0.0095040616409332	0.00155048209835795
8	123247416	123259755	3	gain	AAB	100	germline	1	2.0466384998497e-07	3.06103959957227e-08
8	135047613	135075033	2	neutral	AA	100	somatic	0	0.00168107953550588	0.021343857189302
8	141600993	141669543	2	neutral	AA	47.3253	somatic	0	7.01735469287525e-09	2.96926837450862e-07
8	144125004	144126375	9	gain	AAAAAABBB	100	germline	1	0.0832795599061685	0.270063264845059
9	3504276	3505647	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
9	6700077	6711045	1	loss	A	-1	germline	1	8.23106792746267e-06	7.56314213035125e-06
9	12099075	12249885	2	neutral	AA	47.7862	somatic	0	0.000420478716782085	0.000348192131954916
9	16875639	16926366	2	neutral	AA	30.2972	somatic	0	0.00172529675537255	0.00360630807999185
9	22496739	22502223	1	loss	A	-1	somatic	0	0.00118646824824323	0.00149257317221663
9	29709570	29738361	2	neutral	AA	100	somatic	0	0.00732325594715155	0.0233323710327826
9	32280195	32325438	2	neutral	AA	54.5682	somatic	0	0.264180304681979	0.589634487142389
9	33793779	33803376	2	neutral	AA	1.13247	somatic	0	5.44082962910573e-05	0.0001646815854498
9	35079777	35111310	2	neutral	AA	54.5681	somatic	0	0.231487651084366	0.221030211722229
9	39015918	39017289	5	gain	AAABB	5.05629	somatic	0	0.083293602644658	0.270087652151058
9	40907898	40913382	6	gain	AAAABB	100	somatic	0	0.00270180012196392	0.00495987481651095
9	40913382	40916124	8	gain	AAAAAABB	9.8271	somatic	0	0.0143114698652912	0.0366394719154163
9	40922979	40924350	5	gain	AAAAA	4.24488	somatic	0	0.0832899245991941	0.270081264844121
9	69123078	69128562	1	loss	A	-1	somatic	0	0.00135869966227004	0.00145207732855346
9	77621907	77656182	2	neutral	AA	36.3786	somatic	0	0.0860742867548183	0.261289319413561
9	86538891	86541633	1	loss	A	-1	somatic	0	0.0161438034659982	0.0401600408132359
9	87099630	87188745	2	neutral	AA	12.365	somatic	0	0.324294926729862	0.379099911387292
9	87993522	88012716	2	neutral	AA	54.5678	somatic	0	0.330049487544412	0.0720213889513961
9	96275733	96292185	2	neutral	AA	54.568	somatic	0	0.0440813188440793	0.0126769927415044
9	103012827	103014198	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
9	103884783	103901235	2	neutral	AA	100	somatic	0	0.0863603493202117	0.0870066883962491
9	110262675	110268159	1	loss	A	-1	germline	1	0.000949101053305477	0.00163556459622494
9	116463708	116632341	2	neutral	AA	21.921	germline	1	0.209527211900908	0.0408623574950696
9	119508699	119633460	2	neutral	AA	21.4971	somatic	0	0.0126329638063526	0.0851527441869834
9	128649156	128651898	0	loss	-	-1	somatic	0	0.014315163463437	0.036652660115147
9	129087876	129120780	2	neutral	AA	21.8273	germline	1	0.732439828387	0.923644401388058
9	129425142	129444336	3	gain	AAB	0.330404	germline	1	7.97890087753789e-09	2.40198916312551e-09
9	135321813	135325926	1	loss	A	-1	somatic	0	0.00545550520550272	0.0097071947275269
9	136592730	136602327	2	neutral	AA	21.8272	somatic	0	0.202466800382888	0.283032089984396
10	393477	673161	2	neutral	AA	39.9168	somatic	0	1.03515242116587e-17	1.50213175231784e-13
10	14096622	14368080	2	neutral	AA	48.2247	somatic	0	6.65020440195115e-08	1.14664490746819e-06
10	20562258	20567742	1	loss	A	-1	somatic	0	0.000688127279593797	0.000841139495420529
10	26560383	26660466	2	neutral	AA	1.00668	germline	1	0.00663275375579536	0.0370203715927412
10	26936037	26940150	4	gain	AAAB	9.73653	germline	1	0.00270375265707981	0.00496261755143368
10	38483970	38503164	3	gain	AAB	1.69864	somatic	0	8.55523830123864e-10	4.30603208645408e-09
10	38503164	38512761	1	loss	A	-1	somatic	0	0.000180313164002833	0.000161511136086978
10	38526471	38529213	16	gain	AAAAAAAAAAAAAAAB	1.46814	germline	1	0.0143084100922845	0.0366356592339917
10	38574456	38578569	1	loss	A	-1	germline	1	0.00771573041386512	0.00980419649565123
10	38578569	38579940	6	gain	AAAAAA	7.35286	germline	1	0.0832882528038394	0.270078361559235
10	38579940	38582682	2	neutral	AA	5.01442	somatic	0	0.150815365327288	0.496833295126921
10	38582682	38595021	1	loss	A	-1	germline	1	2.33967480416948e-06	2.62758166447163e-07
10	38729379	38796558	3	gain	AAB	2.19759	somatic	0	1.07810777412315e-06	3.31684649523822e-07
10	38918577	38919948	17	gain	-	-1	germline	1	0.0832712020438283	0.270048749354644
10	41856630	41914212	18	gain	AAAAAAAAAAAABBBBBB	2.45864	germline	1	9.24973536065149e-13	3.44169137633799e-15
10	42300834	42320028	3	gain	AAB	3.74032	somatic	0	1.34228218887673e-08	1.76410454022502e-08
10	46515288	46560531	5	gain	AAABB	0.529032	germline	1	2.40213767649519e-21	0
10	52798581	52975440	2	neutral	AA	100	somatic	0	0.462616252043734	0.101084577600248
10	56752545	56767626	1	loss	A	-1	germline	1	7.18401635818211e-08	6.35121277792194e-09
10	58512909	58570491	2	neutral	AA	100	somatic	0	0.247539997003452	0.672914393025752
10	65547510	65555736	1	loss	A	-1	germline	1	7.68135057967181e-05	4.51610179283968e-05
10	72516303	72652032	2	neutral	AA	100	somatic	0	0.101575006478757	0.00689835263294913
10	91591026	91884420	2	neutral	AA	27.2839	somatic	0	1.49856972024747e-05	0.000144815260867071
10	118834167	118893120	2	neutral	AA	25.4031	germline	1	0.0108954631679735	0.0267426297290893
10	128464071	128465442	11	gain	AAAAAABBBBB	22.8263	somatic	0	0.0832768853162894	0.270058619826163
10	131622855	131625597	1	loss	A	-1	somatic	0	0.0158132521482588	0.0411977482016216
11	5762313	5788362	1	loss	A	-1	germline	1	5.68963866591759e-12	4.09672296086683e-14
11	42793023	42797136	1	loss	A	-1	germline	1	0.00346978611692764	0.00603195800094125
11	55184121	55215654	1	loss	A	-1	germline	1	2.55572067242289e-12	2.88657986402541e-15
11	56922549	56925291	2	neutral	AA	54.5678	somatic	0	0.238647646202323	0.484975084997312
11	65396700	65418636	2	neutral	AA	54.5678	somatic	0	0.000776817543644625	0.00482669117791301
11	71452407	71563458	2	neutral	AA	2.52031	somatic	0	0.512515388957165	0.498395710652295
11	71563458	72029598	2	neutral	AA	10.109	somatic	0	0.23544895542751	0.121249104885014
11	75112977	75129429	2	neutral	AA	87.2904	somatic	0	0.246674051564037	0.348528977568756
11	81046665	81089166	2	neutral	AA	28.4947	somatic	0	0.0596481401451119	0.0950562656440533
11	86098800	86101542	2	neutral	AA	100	somatic	0	0.295729649513289	0.544904024801992
11	86178318	86187915	1	loss	A	-1	germline	1	2.11324251376658e-05	7.01374312461756e-06
11	87797469	87809808	2	neutral	AA	100	somatic	0	0.685520860157082	0.781371354487344
11	88583052	88607730	2	neutral	AA	100	somatic	0	0.123607363934205	0.131135040828538
11	94729245	94744326	2	neutral	AA	54.5678	somatic	0	0.0120633151888197	0.062047568764705
11	96751470	96755583	2	neutral	AA	54.5678	somatic	0	0.980058530379597	0.996975699199661
11	97028412	97106559	2	neutral	AA	100	somatic	0	0.19207667504869	0.264126196508042
11	104396166	104403021	1	loss	A	-1	somatic	0	0.000295995397183103	0.000301595606009286
11	107506965	107509707	2	neutral	AA	100	somatic	0	0.507194524286284	0.871211781283591
11	109237167	109241280	2	neutral	AA	100	somatic	0	0.65901215098662	0.935834412077063
11	112257480	112279416	2	neutral	AA	66.1298	somatic	0	0.308510221751209	0.311291439430375
11	116673471	116674842	4	gain	AABB	100	somatic	0	0.0832969464365223	0.270093458889409
11	117971808	117975921	2	neutral	AA	100	somatic	0	0.193271985244776	0.300956095398225
11	118333752	118396818	2	neutral	AA	12.1293	somatic	0	0.321192181478185	0.122522397528392
11	127062909	127327512	2	neutral	AA	40.336	somatic	0	0.00740146749881242	0.000897217211903278
11	129057714	129083763	2	neutral	AA	54.5696	somatic	0	0.003663756603522	0.00389834311911419
11	129242799	129248283	2	neutral	AA	100	somatic	0	0.425168152025143	0.385737446784716
11	129584178	129676035	2	neutral	AA	61.1178	somatic	0	8.67253148133103e-05	0.00070133293745811
11	132054720	132060204	3	gain	AAB	6.84206	germline	1	0.000533445362296384	0.000672258943190784
12	2255295	2256666	9	gain	-	-1	germline	1	0.0832795599061685	0.270063264845059
12	11384784	11391639	3	gain	-	-1	germline	1	0.000107882336194048	9.10368812485629e-05
12	21401310	21419133	1	loss	A	-1	germline	1	4.12878708195413e-09	1.43128064955533e-10
12	30325149	30329262	1	loss	A	-1	germline	1	0.0251234416445978	0.0706090366290808
12	32177370	32182854	1	loss	A	-1	somatic	0	0.000763960720655696	0.0010588028719668
12	37616127	37624353	1	loss	A	-1	germline	1	8.6066019424724e-05	4.17089219393318e-05
12	39711015	39713757	1	loss	A	-1	somatic	0	0.0144180764658963	0.0369483340150103
12	44151684	44153055	15	gain	-	-1	somatic	0	0.0832725392561404	0.270051071794839
12	46614000	46655130	2	neutral	AA	36.3786	somatic	0	0.00159677443813941	0.0135408184766574
12	47838303	47871207	2	neutral	AA	65.9897	somatic	0	0.00882883019867075	0.0140999820960286
12	55388400	55391142	4	gain	AABB	48.2961	somatic	0	0.0143221836166337	0.0366645807350178
12	79762038	79768893	3	gain	-	-1	somatic	0	0.000107957085497274	9.11415347187861e-05
12	108522876	108579087	2	neutral	AA	28.1594	germline	1	0.0692441671361129	0.313424995889194
12	112831929	112836042	2	neutral	AA	100	somatic	0	0.822929941770058	0.962421283927879
12	112925157	112971771	2	neutral	AA	100	somatic	0	0.0282915170040393	0.0222139394700577
12	114929559	114958350	2	neutral	AA	43.0415	somatic	0	0.033645200798117	0.0386044646741247
12	116850330	117099852	2	neutral	AA	54.5678	somatic	0	0.00955231694948525	0.013150873457478
12	120926313	120929055	1	loss	A	-1	somatic	0	0.0143557427677548	0.0367428641451593
12	127963656	127974624	2	neutral	AA	100	germline	1	0.332186693288042	0.657250717876857
12	128082933	128085675	1	loss	A	-1	somatic	0	0.0207493258810437	0.0565802666075741
12	132471504	132875949	2	neutral	AA	7.68367	somatic	0	4.8721732212407e-36	0
13	18212364	18213735	16	gain	AAAAAAAAABBBBBBB	77.7066	germline	1	0.0832715363452755	0.270049329963326
13	20251041	20255154	1	loss	A	-1	germline	1	0.00591446741492998	0.00954757333156098
13	22019631	22021002	0	loss	-	-1	germline	1	0.0832701991460094	0.270056297338573
13	23057478	23062962	1	loss	A	-1	germline	1	0.000958914627447419	0.00158497550152692
13	28065741	28079451	2	neutral	AA	38.7332	somatic	0	0.444858652664539	0.654253239550545
13	38482599	38486712	1	loss	A	-1	germline	1	0.0147524301052551	0.0379485415940108
13	48958410	48962523	1	loss	A	-1	germline	1	0.00500572228670621	0.0098670564579848
13	56248017	56278179	2	neutral	AA	100	somatic	0	0.949745074486774	0.828027697012426
13	57177555	57214572	1	loss	A	-1	germline	1	8.09474884622396e-17	0
13	63027612	63028983	3	gain	AAB	9.16663	germline	1	0.0834120390996374	0.270293266174656
13	63028983	63057774	3	gain	AAB	0.865382	somatic	0	5.28239970959537e-09	4.64381645359779e-08
13	63057774	63063258	3	gain	AAB	1.12849	germline	1	0.000550434092602954	0.000727263693224289
13	63063258	63064629	3	gain	AAB	5.38954	germline	1	0.0833126637148387	0.270120751780277
13	63064629	63068742	4	gain	AABB	2.07193	germline	1	0.00270247326434476	0.00496081041692797
13	65322666	65380248	2	neutral	AA	100	somatic	0	0.000107620287004792	7.14299476711755e-06
13	68214105	68256606	2	neutral	AA	27.2914	somatic	0	0.271930789214104	0.55497228253254
13	77292867	77362788	2	neutral	AA	54.5679	somatic	0	0.00563408440185396	0.00908049612192541
13	79372674	79374045	4	gain	AABB	49.8133	somatic	0	0.0832956089067284	0.270091136183134
13	80717625	80740932	2	neutral	AA	100	somatic	0	0.264019317609555	0.334588689352478
13	86497761	86499132	15	gain	AAAAAAAAABBBBBB	100	somatic	0	0.08327187064781	0.270049910572919
13	90714957	91016577	2	neutral	AA	40.3532	somatic	0	0.113723472165012	0.0255832922195032
13	97827705	97863351	2	neutral	AA	44.6009	somatic	0	0.428632085533957	0.56962935307929
13	100015821	100087113	2	neutral	AA	100	somatic	0	7.21418580770393e-13	1.24433796599988e-12
13	101241495	101244237	0	loss	-	-1	germline	1	0.0143107840039182	0.0366388364444015
13	114153573	114156315	1	loss	A	-1	somatic	0	0.0224686949133363	0.0620527087339147
14	0	16092798	3	gain	AAB	-1	germline	1	NA	NA
14	16092798	16094169	10	gain	-	-1	germline	1	0.0832788912521754	0.270062103584867
14	16094169	16095540	6	gain	-	-1	germline	1	0.0832879184480304	0.270077780904992
14	16095540	18487935	3	gain	AAB	-1	germline	1	NA	NA
14	18490677	18657939	3	gain	AAB	-1	germline	1	NA	NA
14	18657939	18662052	5	gain	AAAAB	64.8705	germline	1	0.0143138969922117	0.0366431260608764
14	18662052	18681246	3	gain	AAB	-1	germline	1	NA	NA
14	18681246	19956276	3	gain	AAB	0.288893	somatic	0	4.00947897192919e-62	0
14	20237331	20238702	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
14	20903637	20958477	1	loss	A	-1	germline	1	1.45326233682205e-12	3.99680288865056e-15
14	35135988	35145585	1	loss	A	-1	germline	1	1.91022639996302e-05	7.90835980823967e-06
14	40140138	40148364	1	loss	A	-1	somatic	0	0.00146271775922681	0.0015994380285741
14	41140968	41199921	1	loss	A	-1	germline	1	1.65705999328233e-25	0
14	49303902	49480761	2	neutral	AA	59.1343	somatic	0	0.00143770636101754	0.0079685172585563
14	50112792	50147067	2	neutral	AA	54.5678	somatic	0	0.0221984981092895	0.0467482546064633
14	50245779	50251263	2	neutral	AA	100	somatic	0	0.447344406072476	0.45992149233771
14	52173405	52206309	2	neutral	AA	100	somatic	0	0.403512765602251	0.805446462776029
14	55300656	55306140	2	neutral	AA	100	somatic	0	0.919939704450915	0.864819169427554
14	60433680	60435051	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
14	64035297	64094250	2	neutral	AA	100	somatic	0	0.835657400293488	0.869864087154458
14	69549459	69556314	1	loss	A	-1	germline	1	0.000443708869298379	0.000294322053682183
14	73533585	73554150	1	loss	A	-1	germline	1	0.000192554954811171	0.000240000203424517
14	76157679	76171389	2	neutral	AA	100	germline	1	0.965697749581712	0.735467821701848
14	76841808	76858260	2	neutral	AA	21.8289	somatic	0	0.707229967139321	0.805341184225464
14	77479323	77502630	2	neutral	AA	30.2226	somatic	0	0.116683009010465	0.187543104599903
14	82032414	82037898	1	loss	A	-1	germline	1	0.0206336318021592	0.0562024401479146
14	84830625	84836109	1	loss	A	-1	germline	1	0.00127095462117005	0.0016123598804817
14	85614837	85658709	2	neutral	AA	91.8857	somatic	0	0.925082258746754	0.76034324572377
14	89567430	89589366	2	neutral	AA	100	somatic	0	0.361994846482709	0.376746767360727
14	91118031	91157790	2	neutral	AA	36.3849	somatic	0	0.961413601702261	0.704963939198182
14	101711748	101725458	1	loss	A	-1	somatic	0	0.000368463629288511	0.00149872093532644
15	17025078	17026449	4	gain	-	-1	germline	1	0.0832959432875459	0.270091716858336
15	17079918	17082660	10	gain	-	-1	germline	1	0.0143102564379769	0.0366380421192007
15	20340156	20341527	18	gain	AAAAAAAAAAAAABBBBB	100	germline	1	0.0832708677434682	0.270048168746874
15	20341527	20370318	7	gain	AAAAABB	2.56498	germline	1	9.15564922550814e-11	1.38633549084943e-12
15	20379915	20381286	3	gain	AAB	88.6884	germline	1	0.0833109915497741	0.270117848185566
15	20386770	20673309	7	gain	AAAAAAB	9.29673	germline	1	1.09266738118592e-20	0
15	20673309	22221168	7	gain	AAAAAAB	-1	germline	1	NA	NA
15	22221168	22295202	3	gain	AAB	2.44802	somatic	0	5.71330983662163e-10	1.26210153439388e-12
15	24871311	24874053	0	loss	-	-1	somatic	0	0.0143252459876255	0.0366788899561986
15	25528020	25529391	4	gain	AAAA	4.27132	somatic	0	0.083300624733163	0.270099846406844
15	41415168	41448072	2	neutral	AA	36.3818	somatic	0	0.0760843281775802	0.11793553805009
15	54552090	54553461	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
15	55387029	55461063	2	neutral	AA	100	somatic	0	0.00134773773922466	0.00387364646036648
15	68396448	68397819	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
15	76592286	76603254	1	loss	A	-1	germline	1	5.17146560765922e-05	3.6515148690075e-05
15	99875979	99877350	1	loss	A	-1	germline	1	0.0833190181900292	0.270131785647932
15	100709547	100710918	4	gain	AABB	9.74691	somatic	0	0.083300624733163	0.270099846406844
16	1024137	1025508	7	gain	AAAAAAA	11.2867	germline	1	0.0832865810356671	0.270075458297131
16	3066927	3213624	2	neutral	AA	24.6647	somatic	0	0.00810056169591976	0.00257735378443846
16	12626910	12633765	2	neutral	AA	100	germline	1	0.128481266527985	0.246293771329136
16	20039907	20042649	2	neutral	AA	100	somatic	0	0.305602274396199	0.746332124275689
16	21523329	21582282	4	gain	AABB	4.26246	germline	1	4.39098091558656e-14	1.11022302462516e-16
16	22614645	22635210	4	gain	AABB	6.2843	germline	1	1.983103903209e-11	1.88737914186277e-13
16	22635210	22636581	4	gain	-	-1	germline	1	0.0833002903371224	0.270099265718884
16	22636581	22692792	4	gain	AAAB	2.47165	germline	1	2.91455042938821e-27	0
16	22692792	22699647	4	gain	AABB	9.84198	germline	1	0.000107748207557599	9.09500858589096e-05
16	23773140	23899272	2	neutral	AA	7.86934	germline	1	0.000165509485593255	0.000885728223316451
16	23899272	23902014	1	loss	A	-1	somatic	0	0.0417740175714301	0.0875196226097791
16	30115386	30175710	2	neutral	AA	27.2839	somatic	0	3.45598607065482e-10	1.68469016514905e-10
16	34062495	34065237	13	gain	AAAAAAAAABBBB	3.46347	germline	1	0.0143092013575625	0.0366372478090643
16	34070721	34084431	2	neutral	AA	15.0638	germline	1	8.41089650434526e-06	4.65942229066485e-05
16	34084431	34085802	10	gain	AAAAAAAAAA	11.6436	germline	1	0.0832788912521754	0.270062103584867
16	34085802	34096770	2	neutral	AA	5.34538	germline	1	0.00912183900745085	0.0252315549174156
16	34096770	34099512	8	gain	AAAAABBB	4.23844	germline	1	0.0143121557556601	0.0366426494151257
16	34099512	34161207	2	neutral	AA	3.35294	germline	1	0.919455910026024	0.814613049389563
16	34161207	34191369	2	neutral	AA	-1	germline	1	0.0143152162352164	0.0366453504794406
16	34191369	34956387	2	neutral	AA	7.9666	germline	1	2.36803523839812e-26	0
16	34956387	34957758	2	neutral	AA	4.19753	germline	1	0.616463162068737	0.800372491533965
16	35231958	35513013	3	gain	AAB	2.52811	somatic	0	1.75812344297717e-126	0
16	35513013	35523981	3	gain	AAB	42.3759	germline	1	9.71798502303976e-07	2.28554988601637e-07
16	36121737	36124479	3	gain	-	-1	germline	1	0.0143238731292097	0.0366621963397196
16	36124479	36125850	6	gain	-	-1	germline	1	0.0832885871607358	0.27007894221439
16	46401495	46402866	9	gain	AAAAABBBB	22.3841	germline	1	0.0832798942347959	0.270063845476521
16	46402866	46465932	2	neutral	AA	0.386437	germline	1	2.31136951179344e-06	9.38326609112305e-06
16	50336265	50343120	2	neutral	AA	100	germline	1	0.114475797935126	0.276138064439292
16	52904148	53005602	2	neutral	AA	31.039	somatic	0	0.013313089174328	0.0228302134305305
16	55765425	55787361	1	loss	A	-1	germline	1	1.26301963314583e-06	2.19058855610577e-07
16	57856200	57875394	2	neutral	AA	27.2839	germline	1	0.019467125242991	0.0269317307562935
16	59423253	59450673	2	neutral	AA	100	germline	1	0.201471231682598	0.0460428205144857
16	70149957	70162296	3	gain	AAB	2.54352	germline	1	2.04899122229675e-07	3.07552544542844e-08
16	78459588	78496605	2	neutral	AA	36.517	somatic	0	0.243389603511276	0.212439567526109
16	78914760	78929841	2	neutral	AA	27.2839	somatic	0	0.822278320522505	0.180381876241929
16	83763987	83859957	2	neutral	AA	49.3863	somatic	0	0.339748663476845	0.203365561032953
16	84870384	84921111	2	neutral	AA	95.3597	somatic	0	0.275334677004086	0.452172590853178
16	87187374	87223020	2	neutral	AA	7.37794	somatic	0	0.974404572377719	0.971974791060006
16	88492566	88503534	2	neutral	AA	7.74133	germline	1	0.131379476094419	0.362471588821619
16	89289117	89301456	2	neutral	AA	33.0709	somatic	0	0.961323839068899	0.743673847698667
16	89884131	89910180	2	neutral	AA	17.3011	somatic	0	0.631267333221035	0.919712331287389
17	4761483	4784790	2	neutral	AA	100	germline	1	0.0460338876007185	0.10392157515713
17	9171990	9195297	2	neutral	AA	54.5678	germline	1	0.479541539595147	0.559708364673916
17	11927700	11938668	2	neutral	AA	36.4135	somatic	0	0.240631992721743	0.225562801070851
17	13574271	13620885	2	neutral	AA	54.5789	somatic	0	0.00480110488471357	0.0043811485690306
17	21290259	21303969	4	gain	AABB	0.222475	germline	1	4.33848396881792e-08	4.14057921283018e-09
17	21675510	21856482	4	gain	-	-1	germline	1	9.91818406635179e-10	1.94809501863347e-10
17	21856482	21857853	6	gain	-	-1	germline	1	0.0832889215187194	0.270079522870456
17	21857853	21883902	3	gain	-	-1	somatic	0	1.22715835196067e-13	9.43689570931383e-15
17	21883902	21968904	1	loss	A	-1	germline	1	1.557714321069e-20	0
17	21968904	21977130	6	gain	AAAABB	-1	germline	1	0.0143077771078526	0.0366345472672993
17	21977130	21982614	8	gain	-	-1	germline	1	0.000532402049888914	0.000671344313494027
17	21982614	21985356	6	gain	AAAABB	-1	germline	1	NA	NA
17	21985356	21986727	3	gain	-	-1	germline	1	0.0833320628164677	0.270154435143797
17	21986727	21988098	6	gain	AAAABB	-1	germline	1	NA	NA
17	21988098	22158102	6	gain	AAAABB	0.158828	germline	1	2.27350074089958e-19	0
17	26782485	26783856	4	gain	-	-1	somatic	0	0.0832949401483556	0.270089974835463
17	26783856	26808534	3	gain	-	-1	somatic	0	7.71372300754543e-11	1.04767305941778e-11
17	26808534	26829099	4	gain	-	-1	germline	1	1.5605877070031e-09	4.82552220404386e-10
17	26829099	26866116	3	gain	-	-1	somatic	0	2.22219989548644e-12	6.66133814775094e-15
17	26866116	26867487	7	gain	-	-1	germline	1	0.0832855779878111	0.270073716350803
17	26867487	26878455	3	gain	-	-1	somatic	0	2.96873298953019e-06	1.08216087602031e-05
17	44624679	44650728	2	neutral	AA	27.2882	germline	1	0.113300339029547	0.017275006018229
17	62664297	62775348	2	neutral	AA	40.0425	germline	1	0.17093865861792	0.0728215869263141
17	63820050	63865293	2	neutral	AA	36.3786	somatic	0	0.616117109541155	0.659405568480502
17	69077835	69212193	2	neutral	AA	76.1003	somatic	0	0.956996812309114	0.856307270067596
17	79650987	79655100	1	loss	A	-1	somatic	0	0.0517121127455181	0.224331115372909
17	82129755	82164030	2	neutral	AA	12.6386	somatic	0	0.00161166651043399	0.0113485519792756
17	82358712	82360083	6	gain	AAABBB	9.2677	germline	1	0.0832882528038394	0.270078361559235
17	82584927	82587669	6	gain	AAABBB	11.4658	germline	1	0.0143135803898492	0.0366426494151257
18	5305770	5308512	1	loss	A	-1	germline	1	0.0151721837568377	0.0392422586791334
18	29595777	29597148	0	loss	-	-1	germline	1	0.0832701991460094	0.270056297338573
18	40680312	40687167	1	loss	A	-1	germline	1	0.00021884016524433	0.00026910218805587
18	41283552	41289036	1	loss	A	-1	germline	1	0.0205893845826869	0.0555790702946046
18	43785627	43802079	2	neutral	AA	100	somatic	0	0.648951200296217	0.896011500712749
18	44543790	44545161	0	loss	-	-1	somatic	0	0.0832701991460094	0.270056297338573
18	53427870	53429241	0	loss	-	-1	germline	1	0.0832701991460094	0.270056297338573
18	57453126	57469578	2	neutral	AA	100	germline	1	0.766482666849527	0.893836218119536
18	58798077	58840578	2	neutral	AA	54.5681	somatic	0	0.121566394234622	0.11084061155104
18	59606967	59646726	2	neutral	AA	100	germline	1	0.708925028553241	0.693668656215116
18	67305132	67395618	2	neutral	AA	16.6366	somatic	0	0.0769245238836654	0.154552426371008
18	74616675	74618046	4	gain	-	-1	germline	1	0.0832966120524428	0.270092878211473
18	75011523	75056766	2	neutral	AA	27.284	somatic	0	0.0297301301601462	0.115414964364952
18	79199928	79201299	4	gain	AAAB	100	germline	1	0.0832946057708002	0.270089394162995
18	79519371	79522113	1	loss	A	-1	somatic	0	0.0234052080212143	0.065031965515866
19	567594	568965	1	loss	A	-1	somatic	0	0.128704282672376	0.341738502166935
19	7450014	7451385	15	gain	AAAAAAAAAABBBBB	24.9897	germline	1	0.0832728735619363	0.270051652407166
19	8881338	8993760	2	neutral	AA	1.31168	somatic	0	0.00261984673184656	0.00118919850884858
19	12440454	12459648	2	neutral	AA	54.5678	somatic	0	0.0234144529411446	0.0912497556115224
19	13575642	13596207	2	neutral	AA	100	somatic	0	0.328503159928537	0.198245248134829
19	15553995	15615690	2	neutral	AA	20.7538	somatic	0	6.11193897019541e-06	1.08868881665281e-06
19	17332182	17339037	3	gain	AAB	27.6077	germline	1	0.000108091831893715	9.12354250283132e-05
19	24331137	24405171	4	gain	AABB	0.317427	germline	1	7.99583176755647e-34	0
19	24414768	24420252	2	neutral	AA	4.37463	somatic	0	0.000949942330161837	0.00250168802736495
19	27243141	27324030	2	neutral	AA	2.28324	germline	1	0.0632922299127389	0.239309514642878
19	27330885	27337740	2	neutral	AA	55.9469	germline	1	0.628743504519473	0.614190133377489
19	27337740	27339111	3	gain	AAB	4.26085	germline	1	0.0833150047916028	0.270124816851144
19	27339111	27340482	6	gain	AAAABB	2.74001	germline	1	0.0832889215187194	0.270079522870456
19	27340482	27345966	2	neutral	AA	29.8246	somatic	0	0.0585924051634527	0.238676627966481
19	27347337	27380241	6	gain	AAAABB	0.135134	germline	1	9.53487299483065e-15	0
19	27380241	27382983	3	gain	AAB	15.6021	germline	1	0.0207902486759576	0.0566553513199572
19	27382983	27399435	6	gain	AAAABB	0.199114	germline	1	1.97948504001761e-09	7.56974483095973e-11
19	27399435	27400806	2	neutral	AA	23.4134	somatic	0	0.439252183367633	0.67226107356085
19	27724362	27728475	6	gain	-	-1	germline	1	0.00270191550691856	0.00495997159525963
19	28450992	28498977	2	neutral	AA	27.2888	somatic	0	0.577406509443148	0.220502387446914
19	29512146	29514888	0	loss	-	-1	somatic	0	0.0143148468363643	0.0366459860492983
19	34391535	34392906	6	gain	AAAABB	8.10217	germline	1	0.0832872497396741	0.270076619599239
19	35360832	35370429	1	loss	A	-1	germline	1	1.97383308683782e-05	7.31836464773483e-06
19	51630489	51645570	3	gain	AAB	4.38757	germline	1	9.6019957421557e-09	6.74848399384587e-10
19	53015199	53048103	3	gain	AAB	2.29013	germline	1	4.6189056077301e-16	0
20	60324	65808	8	gain	-	-1	germline	1	0.00270146360823013	0.00495997159525963
20	65808	67179	4	gain	-	-1	germline	1	0.0833002903371224	0.270099265718884
20	1582134	1612296	1	loss	A	-1	germline	1	3.11325351679354e-11	1.36890498936282e-13
20	2766678	2850309	2	neutral	AA	100	somatic	0	0.500160263225504	0.653115698028487
20	4579140	4605189	2	neutral	AA	54.6331	somatic	0	0.0361748895578222	0.0228884941342934
20	4605189	4610673	2	neutral	AA	54.5681	somatic	0	0.365089932054272	0.598233710450712
20	4919148	4976730	2	neutral	AA	100	somatic	0	0.0782061044714738	0.102332478335526
20	5729409	5806185	2	neutral	AA	61.3341	somatic	0	0.0549293158047397	0.00470528659884084
20	19534008	19580622	2	neutral	AA	54.5679	somatic	0	0.0038179087491308	0.00989989095468835
20	20268864	20275719	2	neutral	AA	36.5225	somatic	0	0.481844979534101	0.382135711087002
20	21305340	21306711	0	loss	-	-1	somatic	0	0.0832755480474432	0.270056297338573
20	21554862	21635751	2	neutral	AA	32.3115	somatic	0	0.00570272767811087	0.0332000445814028
20	24429849	24432591	1	loss	A	-1	somatic	0	0.0228215360860663	0.0618921904931601
20	28774548	28775919	4	gain	-	-1	germline	1	0.0832976152079434	0.270094620248014
20	28781403	28786887	9	gain	-	-1	germline	1	0.00270117519837009	0.00495929418036789
20	28803339	28804710	5	gain	-	-1	germline	1	0.083293602644658	0.270087652151058
20	28804710	28818420	8	gain	-	-1	germline	1	4.32819388759798e-08	4.12874723298984e-09
20	28818420	28819791	4	gain	-	-1	germline	1	0.0833032999406335	0.270104491943324
20	28821162	28832130	8	gain	-	-1	germline	1	0.000532416914411107	0.000671350135467486
20	28836243	28838985	3	gain	-	-1	germline	1	0.0143210749695394	0.0366585405304255
20	28870518	28873260	7	gain	-	-1	germline	1	0.0143123140421707	0.0366431260608764
20	28897938	28899309	10	gain	-	-1	somatic	0	0.0832782226025312	0.270060942328321
20	29122782	29124153	11	gain	-	-1	somatic	0	0.0832782226025312	0.270060942328321
20	29262624	29263995	12	gain	-	-1	germline	1	0.0832768853162894	0.270058619826163
20	29263995	29273592	4	gain	-	-1	germline	1	2.21514120666165e-05	1.23202754225282e-05
20	29276334	29280447	4	gain	-	-1	germline	1	0.00270404131839445	0.00496487731814632
20	29283189	29325690	3	gain	-	-1	germline	1	5.93243800686412e-14	4.44089209850063e-16
20	29333916	29335287	8	gain	-	-1	germline	1	0.0832822345656306	0.270067909922273
20	29407950	29410692	5	gain	-	-1	germline	1	0.0143152162352164	0.0366453504794406
20	29859009	29863122	3	gain	-	-1	somatic	0	0.0143369199711225	0.0367017948728331
20	29876832	29879574	7	gain	-	-1	germline	1	0.0143120502321775	0.0366415372628033
20	29886429	29890542	3	gain	-	-1	germline	1	0.0174702717643408	0.0462366840171913
20	29890542	29893284	6	gain	-	-1	germline	1	0.014313474857101	0.0366426494151257
20	30939357	30943470	5	gain	-	-1	germline	1	0.00270202128041584	0.00496022968038579
20	30976374	30977745	5	gain	-	-1	germline	1	0.0832932682714519	0.270087071482235
20	31161459	31165572	3	gain	-	-1	germline	1	0.00303697445870481	0.00604165045746341
20	31165572	31166943	6	gain	-	-1	germline	1	0.0832889215187194	0.270079522870456
20	31184766	31187508	22	gain	-	-1	germline	1	0.0143076716128489	0.0366337530234556
20	31187508	31190250	4	gain	-	-1	germline	1	0.0143344365664414	0.0367038632935307
20	31225896	31227267	5	gain	AAABB	41.0353	somatic	0	0.083293602644658	0.270087652151058
20	31228638	31231380	4	gain	AAAA	10.4302	somatic	0	0.0143178550429942	0.0366493229493039
20	31231380	31245090	3	gain	AAA	5.29837	somatic	0	2.20746949966526e-07	3.89666228173269e-08
20	34653396	34656138	1	loss	A	-1	somatic	0	0.0200534846906528	0.0530826415891981
20	35666565	35681646	2	neutral	AA	100	somatic	0	0.461468004656061	0.814511113380769
20	42568179	42573663	2	neutral	AA	54.5873	somatic	0	0.280436938907303	0.248415807651304
20	44133861	44135232	19	gain	AAAAAAAAAAAAABBBBBB	71.2077	somatic	0	0.0832708677434682	0.270048168746874
20	44676777	44680890	1	loss	A	-1	somatic	0	0.00591005329434336	0.00949682192863388
20	46788117	46789488	4	gain	AAAA	11.3747	somatic	0	0.0832946057708002	0.270089394162995
20	47894514	47895885	7	gain	AAAAAAA	19.3224	germline	1	0.083286915387127	0.270076038947729
20	49959240	49998999	2	neutral	AA	27.2839	somatic	0	0.000444645478428944	0.00186598792526627
20	50987490	51012168	2	neutral	AA	100	somatic	0	0.760408525057878	0.927797229464657
20	51400161	51409758	2	neutral	AA	54.5686	somatic	0	0.975226125781994	0.784665051610755
20	52550430	52562769	2	neutral	AA	100	somatic	0	0.171196342541687	0.414371225219372
20	53669166	53676021	1	loss	A	-1	somatic	0	0.000234299198797636	0.000277190856809439
20	55206057	55234848	2	neutral	AA	36.3827	somatic	0	0.182824188009295	0.0741065693885733
20	58429278	58458069	2	neutral	AA	36.3786	somatic	0	0.612567518226124	0.671761265866132
20	58888563	58892676	1	loss	A	-1	somatic	0	0.00624443552738505	0.0115720350820269
20	60674976	60735300	2	neutral	AA	100	somatic	0	0.947864228597438	0.474778921069751
20	61045146	61046517	8	gain	AAAAABBB	18.2539	germline	1	0.0832822345656306	0.270067909922273
20	62497035	62499777	1	loss	A	-1	somatic	0	0.0209168980969626	0.0570796504949909
20	62509374	62510745	0	loss	-	-1	somatic	0	0.083286915387127	0.270076038947717
21	7258074	7259445	24	gain	-	-1	germline	1	0.083269864848911	0.270046426929029
21	8989647	9008841	9	gain	AAAAAABBB	1.9302	germline	1	2.21142844041171e-05	1.23008994920015e-05
21	9735471	9739584	5	gain	AAABB	5.72768	germline	1	0.00270225207208888	0.00496035872756495
21	10654041	10662267	6	gain	AAAAAA	7.43584	germline	1	2.21235796595336e-05	1.23037800117132e-05
21	10662267	10691058	5	gain	AAAAA	3.32517	germline	1	9.5443612538452e-15	0
21	10691058	10692429	10	gain	AAAAAAAABB	62.2938	germline	1	0.0832788912521754	0.270062103584867
21	10693800	10704768	4	gain	AAAA	1.96912	germline	1	9.65786077091199e-07	2.25484521276798e-07
21	10704768	10707510	7	gain	AAAAAAA	2.11341	germline	1	0.0143124195673691	0.0366426494151257
21	10707510	10715736	5	gain	AAAAA	1.63401	germline	1	2.21309126868148e-05	1.2303940059577e-05
21	10715736	10722591	6	gain	AAAABB	1.36981	germline	1	0.000107638717895119	9.087617457193e-05
21	10722591	10739043	5	gain	AAAAA	1.28765	germline	1	1.98029787292068e-09	7.57072182722140e-11
21	10752753	10755495	11	gain	AAAAAAABBBB	5.58978	germline	1	0.0143100454164042	0.0366382009830362
21	14087025	14088396	1	loss	A	-1	somatic	0	0.126472252158837	0.33849197606925
21	14088396	14089767	0	loss	-	-1	somatic	0	0.0832802285645106	0.270064426108883
21	14089767	14099364	2	neutral	AA	100	somatic	0	0.396799664169915	0.399410611780364
21	19401021	19502475	2	neutral	AA	100	germline	1	0.485769400209476	0.109543808640055
21	20389512	20403222	2	neutral	AA	100	somatic	0	0.548946298230995	0.43562694220799
21	20585565	20589678	1	loss	A	-1	somatic	0	0.00563742805982785	0.00983582182850307
21	21212112	21227193	2	neutral	AA	100	germline	1	0.455655208513608	0.748146062241893
21	23296032	23307000	2	neutral	AA	100	somatic	0	0.346353924635352	0.547112549359435
21	26497317	26500059	2	neutral	AA	100	somatic	0	0.0305846042349497	0.0636983418128203
21	29704086	29706828	2	neutral	AA	100	somatic	0	0.65509807316605	0.652886220581689
21	36489165	36497391	2	neutral	AA	21.8295	somatic	0	0.549553329566375	0.978874885902799
21	37664112	37713468	2	neutral	AA	90.1423	somatic	0	0.207041343647922	0.434608989138218
21	41474121	41475492	0	loss	-	-1	somatic	0	0.0832859123360092	0.270074296998656
21	41805903	41807274	4	gain	AAAA	5.8089	somatic	0	0.0832989527638339	0.270096942976159
21	42564066	42598341	2	neutral	AA	30.6	somatic	0	0.0946298819066246	0.15990560675784
21	43190613	43276986	2	neutral	AA	36.3786	somatic	0	0.281134489893188	0.0990210963438211
21	43279728	43281099	0	loss	-	-1	somatic	0	0.0832875840933086	0.270077200251648
21	43335939	43337310	4	gain	AAAA	4.82767	germline	1	0.0832946057708002	0.270089394162995
21	45436311	45443166	2	neutral	AA	57.497	somatic	0	0.803562387910986	0.487331490282585
21	45552846	45555588	1	loss	A	-1	somatic	0	0.019951421547861	0.0538334438828874
21	45895596	45896967	4	gain	AAAA	24.2941	somatic	0	0.0833046375704663	0.270106814733434
21	46675695	46679808	3	gain	-	-1	somatic	0	0.00284318895280044	0.00537639536186996
22	11627451	11630193	4	gain	-	-1	germline	1	0.0143184356382849	0.0366536136399374
22	12692718	12694089	9	gain	AAAAAAAAA	83.3779	germline	1	0.0832795599061685	0.270063264845059
22	15935133	15937875	3	gain	-	-1	germline	1	0.0143225003868512	0.0366569511476083
22	16055781	16057152	4	gain	-	-1	germline	1	0.0832989527638339	0.270096942976159
22	16558938	16567164	2	neutral	AA	8.02496	germline	1	0.363881147315508	0.464048893544867
22	17300649	17303391	2	neutral	AA	54.568	somatic	0	0.218971600117326	0.480123425803705
22	17809290	17816145	2	neutral	AA	27.2839	somatic	0	0.903749988773272	0.772382189207979
22	18730602	18731973	13	gain	AAAAAAAAAAAAB	30.274	germline	1	0.0832762166796919	0.270057458580551
22	19314648	19316019	2	neutral	AA	100	somatic	0	0.712955596164853	0.856037151831047
22	19542234	19543605	2	neutral	AA	100	somatic	0	0.475383099544233	0.701225554775722
22	19725948	19728690	2	neutral	AA	19.5485	somatic	0	0.98276215022827	0.844569120181223
22	19908291	19911033	2	neutral	AA	100	somatic	0	0.123651333529979	0.173885966138448
22	19972728	20113941	2	neutral	AA	17.072	somatic	0	0.181745440649375	0.139115271736473
22	20596533	20599275	1	loss	A	-1	somatic	0	0.0150750577902058	0.0379800066313307
22	22348671	22352784	2	neutral	AA	1.12676	somatic	0	0.467890999676481	0.7628049576847
22	27607827	27618795	2	neutral	AA	100	somatic	0	0.63420577820225	0.687271154854563
22	27625650	27632505	2	neutral	AA	100	somatic	0	0.10558411925163	0.267169916979455
22	27908076	27909447	2	neutral	AA	100	somatic	0	0.132303134950753	0.346923904049429
22	28722450	28723821	2	neutral	AA	100	somatic	0	0.328305847260704	0.573382732245448
22	28848582	28849953	1	loss	A	63.9118	somatic	0	0.129828030968103	0.343364365095653
22	29120040	29121411	5	gain	AAABB	10.4042	germline	1	0.0832899245991941	0.270081264844121
22	29576583	29769894	2	neutral	AA	100	somatic	0	0.0493484932337124	0.183053495550042
22	31504209	31515177	2	neutral	AA	36.3786	somatic	0	0.298236691258804	0.435239260723209
22	32306244	32307615	2	neutral	AA	100	somatic	0	0.736112211744914	0.86786509770049
22	32563992	32565363	2	neutral	AA	100	somatic	0	0.375242695099196	0.617132021201492
22	32691495	32692866	2	neutral	AA	100	somatic	0	0.241955331616455	0.484075798317739
22	33943218	33944589	2	neutral	AA	100	somatic	0	0.214723440728817	0.453027879203044
22	34065237	34089915	2	neutral	AA	54.5678	somatic	0	0.346907345495722	0.259789617589343
22	34466940	34469682	1	loss	A	-1	germline	1	0.0199100396334935	0.0539131573691299
22	34795980	34797351	2	neutral	AA	100	somatic	0	0.326411301088012	0.571609959118171
22	35248410	35251152	1	loss	A	-1	germline	1	0.0207696139243106	0.0558565561954285
22	35462286	35465028	2	neutral	AA	20.8951	somatic	0	0.444105002920443	0.359122508189278
22	36384969	36386340	2	neutral	AA	100	somatic	0	0.208597982453773	0.445806977411991
22	36727719	36746913	2	neutral	AA	100	somatic	0	0.171661141572391	0.140510075227683
22	36746913	36752397	1	loss	A	-1	germline	1	0.000773704698059794	0.000993209017281727
22	37078695	37099260	2	neutral	AA	21.8564	somatic	0	0.21799813283184	0.3490949738047
22	37568142	37569513	2	neutral	AA	54.5678	somatic	0	0.259847236217917	0.503638798310096
22	38187834	38196060	2	neutral	AA	20.7202	somatic	0	0.588728394616395	0.806976322422789
22	38963820	38989869	1	loss	A	-1	germline	1	7.74730662784271e-11	3.62354590777159e-12
22	39113259	39116001	2	neutral	AA	28.5523	somatic	0	0.253173056258798	0.413240807200587
22	39294231	39295602	2	neutral	AA	100	somatic	0	0.687126151457218	0.842043620100346
22	40334820	40341675	2	neutral	AA	54.5678	somatic	0	0.53198987817105	0.51086703323925
22	40619988	40621359	2	neutral	AA	54.5678	somatic	0	0.258125258335519	0.501789915669152
22	42448902	42459870	2	neutral	AA	100	somatic	0	0.0007253656776294	0.000753095269203086
22	42766974	42775200	2	neutral	AA	54.5683	somatic	0	0.183596716377781	0.399846188615634
22	43829499	43836354	2	neutral	AA	21.8282	somatic	0	0.974684659841899	0.781865216587046
22	44701455	44717907	2	neutral	AA	54.5678	somatic	0	0.0385133921956187	0.0561070209504686
22	44946864	44950977	2	neutral	AA	100	germline	1	0.0620075038805485	0.108544163800754
22	45227919	45232032	2	neutral	AA	27.128	somatic	0	0.856492799657585	0.998989565753032
22	45345825	45349938	2	neutral	AA	13.643	germline	1	0.746186035749419	0.959663726310691
22	45648816	45742044	2	neutral	AA	36.5675	somatic	0	0.772936067222108	0.408092617390994
22	46301412	46312380	2	neutral	AA	27.2839	somatic	0	0.627074107368468	0.427114498470219
22	46877232	46897797	2	neutral	AA	100	germline	1	0.488608335426102	0.541543580151082
22	47021187	47023929	2	neutral	AA	54.5684	somatic	0	0.543969791467592	0.910451809550237
22	47219982	47221353	2	neutral	AA	100	somatic	0	0.888620555062294	0.932105752411917
22	48198876	48208473	2	neutral	AA	19.9169	somatic	0	0.493023874503127	0.901884921420784
22	49488987	49508181	2	neutral	AA	15.0725	somatic	0	0.156501520077176	0.151158280460075
22	50406186	50419896	2	neutral	AA	36.3791	germline	1	0.653343460245059	0.703787918991118
X	4688820	4690191	8	gain	-	-1	somatic	0	0.0832808972272016	0.270065587376376
X	32968437	32971179	0	loss	-	-1	somatic	0	0.0143119447093813	0.0366439204825126
X	49139382	49143495	2	gain	AB	4.22594	somatic	0	0.0118324930272642	0.015574849402423
X	63251085	63255198	3	gain	AAB	77.2415	germline	1	0.00270515774045427	0.00496423157428505
X	63257940	63285360	2	gain	-	-1	germline	1	0.118640585717222	0.292335235785478
X	70914975	70920459	0	loss	-	-1	germline	1	0.00270424339806978	0.0049672349367037
X	78269019	78270390	5	gain	-	-1	germline	1	0.0832899245991941	0.270081264844121
X	108772398	108776511	0	loss	-	-1	somatic	0	0.0143210221787089	0.0366739606729294
X	127463241	127468725	0	loss	-	-1	germline	1	0.0143106784893574	0.0366391541787018
Y	10122093	10128948	2	gain	AB	2.57541	germline	1	0.278388315226596	0.136995132875067
Y	10623879	10656783	2	gain	AB	4.24413	germline	1	0.671380993875804	0.930194446210778
Y	10656783	10658154	6	gain	-	-1	germline	1	0.0832889215187194	0.270079522870456
Y	10660896	10759608	3	gain	-	-1	somatic	0	6.46905271242763e-08	5.40245559399466e-09
Y	10759608	10760979	12	gain	-	-1	germline	1	0.0832768853162894	0.270058619826163
Y	10760979	10765092	3	gain	-	-1	germline	1	0.00270599533338088	0.0049681718096779
Y	10765092	10767834	2	gain	-	-1	germline	1	0.478486574173888	0.908490248499719
Y	10767834	10770576	4	gain	-	-1	germline	1	0.0143183300739601	0.0366537725628451
Y	10770576	10774689	2	gain	-	-1	germline	1	0.906790389183331	0.892948497012549
Y	10774689	10777431	4	gain	-	-1	germline	1	0.0143167994683976	0.0366502763981323
Y	10777431	10784286	2	gain	-	-1	germline	1	0.681390282685716	0.401246230293828
Y	10784286	10785657	5	gain	-	-1	germline	1	0.0832912620550494	0.270083587488431
Y	10785657	10795254	2	gain	-	-1	germline	1	0.018887256664346	0.0388741248086617
Y	10795254	10797996	6	gain	-	-1	germline	1	0.0143135276233893	0.0366431260608764
Y	10797996	10800738	3	gain	-	-1	germline	1	0.0143424165134797	0.0366971810710716
Y	10800738	10802109	6	gain	-	-1	germline	1	0.0832889215187194	0.270079522870456
Y	10802109	10806222	2	gain	-	-1	germline	1	0.589411312418138	0.494072732724035
Y	10806222	10810335	3	gain	-	-1	germline	1	0.0143274639271723	0.0366747556794175
Y	10810335	10821303	2	gain	-	-1	somatic	0	0.00157894915835069	0.0127037845647289
Y	10821303	10826787	3	gain	-	-1	germline	1	0.0370534344063014	0.0222593995993345
Y	10826787	10887111	2	gain	-	-1	somatic	0	0.00542281074518584	3.67220405917967e-05
Y	10887111	10888482	4	gain	-	-1	germline	1	0.0833032999406335	0.270104491943324
Y	10888482	10900821	2	gain	-	-1	somatic	0	0.18396344369887	0.485658615411216
Y	10920015	10928241	3	gain	-	-1	germline	1	0.000580516033912816	0.000829771307371607
Y	10928241	10935096	2	gain	-	-1	germline	1	0.0577705764555845	0.0178045297360807
Y	10935096	10937838	3	gain	-	-1	germline	1	0.014324506741749	0.0366672832137054
Y	10937838	10974855	2	gain	-	-1	somatic	0	0.0103530688836702	2.2599078851937e-05
Y	10981710	10985823	3	gain	-	-1	germline	1	0.051554863373237	0.139299222071875
Y	10985823	10989936	5	gain	-	-1	germline	1	0.00270200204858945	0.00496071362317629
Y	10989936	10999533	2	gain	-	-1	germline	1	0.331365595031426	0.438316723979281
Y	10999533	11000904	13	gain	-	-1	germline	1	0.0832762166796919	0.270057458580551
Y	11000904	11011872	2	gain	-	-1	germline	1	0.0143841632765057	0.0035380416505153
Y	11013243	11014614	12	gain	-	-1	germline	1	0.083276550997447	0.270058039202901
Y	11014614	11040663	2	gain	AA	4.80253	germline	1	0.996043742056322	0.187267853325136
Y	11290185	11306637	18	gain	AAAAAAAAAAAABBBBBB	3.19594	germline	1	1.97553784773029e-09	7.5654149611637e-11
Y	11306637	11308008	3	gain	AAB	2.10719	germline	1	0.0833303903360193	0.27015153128482
Y	11314863	11317605	4	gain	AAAB	4.7886	germline	1	0.0143176967024283	0.0366496407631687
Y	11320347	11334057	8	gain	AAAAABBB	1.7598	germline	1	4.59861399046181e-06	1.66509043519891e-06
Y	11530110	11531481	4	gain	AAAA	5.85492	germline	1	0.0832976152079434	0.270094620248014
Y	11531481	11532852	21	gain	AAAAAAAAAAAAAAAAAAAAB	2.34659	germline	1	0.0832701991460096	0.270047007534066
Y	11687775	11690517	6	gain	AAAAAA	8.45974	germline	1	0.0143131054978877	0.036644556030677
Y	11716566	11717937	6	gain	AAAAAA	10.9136	germline	1	0.0832889215187194	0.270079522870456
Y	11720679	11723421	25	gain	AAAAAAAAAAAAAAABBBBBBBBBB	100	germline	1	0.0143075661185314	0.0366337530234556
Y	11727534	11734389	2	gain	AA	7.11115	somatic	0	0.450158986558401	0.137506148194961
Y	11734389	11735760	4	gain	AAAB	28.5904	somatic	0	0.0833032999406335	0.270104491943324
Y	11735760	11746728	2	gain	AB	10.4237	somatic	0	0.273664777710999	0.476115824904699
Y	11746728	11749470	10	gain	AAAAAABBBB	18.5433	germline	1	0.0143112588279344	0.0366434438277239
Y	26637159	26641272	3	gain	AAB	11.8063	germline	1	0.00270615902863801	0.0049671057255557
Y	26641272	26656353	2	gain	AA	7.40149	germline	1	0.549518040928055	0.89097295283319
Y	56822466	56851257	13	gain	AAAAAAAAABBBB	42.3954	germline	1	4.26969857624658e-12	2.54241072639161e-14
