chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5668936	5676124	3	gain	-	-1	somatic	0	0.00270294726681366	0.00496348650308975
1	8144004	8151192	3	gain	-	-1	somatic	0	0.00270597493793707	0.0049659834144018
1	16611468	16623448	8	gain	-	-1	germline	1	0.000532153997046974	0.000671047982247819
1	16882216	16942116	3	gain	-	-1	germline	1	1.00190567530498e-08	9.67726676570635e-10
1	26133172	26140360	1	loss	A	-1	somatic	0	0.00293642446950046	0.00575362021194237
1	31430728	31433124	7	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
1	55661476	55668664	1	loss	A	-1	somatic	0	0.00270963256626305	0.00497467482144132
1	93822568	93827360	1	loss	A	-1	somatic	0	0.0143591728348139	0.0367913188703372
1	124941816	124975360	3	gain	-	-1	germline	1	4.34249824599525e-08	4.14135692405893e-09
1	125068804	125073596	3	gain	-	-1	somatic	0	0.0146720134216055	0.0377268822092783
1	125080784	125083180	8	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
1	125083180	125085576	5	gain	-	-1	germline	1	0.0832745044401782	0.270054264856179
1	125085576	125087972	1	loss	A	-1	germline	1	0.0836642101829586	0.270730425501673
1	125150268	125157456	4	gain	-	-1	germline	1	0.00270135855650162	0.00495985668639054
1	125162248	125167040	5	gain	-	-1	germline	1	0.0143082885765469	0.036634961168158
1	150346604	150356188	2	neutral	AA	100	somatic	0	0.0918110736806174	0.329538613129471
1	150770696	150789864	2	neutral	AA	54.5678	somatic	0	0.699601165405837	0.849771422603739
1	151393656	151417616	2	neutral	AA	100	somatic	0	0.0923538067089319	0.0185984894434066
1	151841708	152282572	2	neutral	AA	69.7197	somatic	0	0.595966881570304	0.437477823112718
1	152282572	152352056	2	neutral	AA	54.5678	somatic	0	0.396269880580602	0.0842958951134255
1	153027728	153075648	2	neutral	AA	100	germline	1	0.240145630729908	0.479514929385115
1	158895532	158900324	1	loss	A	-1	somatic	0	0.0153430068605372	0.0397705117550959
1	161023180	161054328	2	neutral	AA	36.3787	somatic	0	0.168629467289399	0.42836215774313
1	166272816	166289588	2	neutral	AA	100	somatic	0	0.0537060771480057	0.141582927443521
1	169258232	169272608	1	loss	A	-1	germline	1	2.22359442708282e-05	1.23939325500366e-05
1	170475400	170484984	2	neutral	AA	100	somatic	0	0.588893914902177	0.782006006012153
1	170820424	170935432	2	neutral	AA	30.9498	somatic	0	0.708760033499777	0.631248419172908
1	172737224	172749204	2	neutral	AA	54.5678	somatic	0	0.438616409169418	0.618569495756374
1	196062284	196122184	2	neutral	AA	100	somatic	0	0.156855896884015	0.05171860956518
1	196771500	196826608	1	loss	A	-1	germline	1	2.21871386823913e-05	1.23718568453279e-05
1	209903976	209913560	1	loss	A	-1	germline	1	0.014316727305226	0.0366612131438728
1	210716220	210725804	2	neutral	AA	100	somatic	0	0.636535443107311	0.429924936458552
1	218697296	218716464	2	neutral	AA	100	somatic	0	0.831027160720599	0.899989229010329
1	224011624	224014020	8	gain	AAAAAAAA	1.7862	germline	1	0.083270979099617	0.270048142153403
1	228068052	228072844	1	loss	A	-1	somatic	0	0.0143232216221273	0.0366804936845396
1	231379324	231403284	2	neutral	AA	100	somatic	0	0.0544288873639479	0.0716231212514877
1	234776852	234781644	9	gain	AAAAAAABB	28.7342	germline	1	0.0143076396253495	0.0366338444277349
1	236097048	236099444	5	gain	AAABB	19.6183	germline	1	0.0832721541997044	0.270050183043069
1	237002736	237007528	2	neutral	AA	100	somatic	0	0.338353513137675	0.576193697112893
1	240656636	240668616	2	neutral	AA	100	germline	1	0.712740996910293	0.731026465532688
1	248263936	248525100	2	neutral	AA	100	somatic	0	0.273835944952415	0.486465849085984
1	248585000	248630524	1	loss	A	-1	germline	1	4.46426009249307e-14	1.11022302462516e-16
1	248791056	248901272	2	neutral	AA	71.4936	somatic	0	0.893232599568249	0.982649985511626
2	3179492	3181888	7	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
2	16129872	16149040	1	loss	A	-1	somatic	0	0.00241308488806866	0.00324472826926081
2	18293460	18298252	1	loss	A	-1	somatic	0	0.0143241495937846	0.0366776988537135
2	66278152	66280548	0	loss	-	-1	somatic	0	0.0832651038006722	0.270037937873968
2	89773328	89790100	5	gain	-	-1	germline	1	2.21036332373386e-05	1.22946071481334e-05
2	89790100	89794892	3	gain	-	-1	germline	1	0.0143152432546907	0.036647805823987
2	89794892	89826040	4	gain	-	-1	germline	1	1.97635534062242e-09	7.56167350957071e-11
2	89826040	89842812	25	gain	-	-1	germline	1	4.5939709910809e-06	1.6634345381128e-06
2	89842812	89850000	4	gain	-	-1	germline	1	0.00270110511785688	0.00495917636671173
2	91409796	91412192	3	gain	-	-1	germline	1	0.0833038869800827	0.270105291319974
2	91412192	91414588	5	gain	-	-1	germline	1	0.0832721541997044	0.270050183043069
2	117039808	117044600	1	loss	A	-1	somatic	0	0.0144012631131304	0.0369181741923931
2	126916120	126920912	1	loss	A	-1	somatic	0	0.0143203452469842	0.0366547882676913
2	132242428	132247220	3	gain	-	-1	germline	1	0.0143186753275082	0.0366620512438328
2	146105684	146120060	1	loss	A	-1	germline	1	2.25772725359311e-05	1.29774820911699e-05
2	161277156	161284344	3	gain	-	-1	germline	1	0.0163181329559913	0.0427435397063561
2	169464288	169469080	1	loss	A	-1	germline	1	0.0143284189465071	0.0366902770597802
2	172039988	172047176	1	loss	A	-1	germline	1	0.00273116131409488	0.00502407530880788
2	172138224	172143016	0	loss	-	-1	germline	1	0.0143103283064932	0.036644175413198
2	176400708	176407896	1	loss	A	-1	germline	1	0.00272406991897561	0.00499187134537704
2	179201632	179213612	1	loss	A	-1	germline	1	0.00010842136060321	9.17395007337118e-05
2	239343628	239348420	2	neutral	AA	54.5681	somatic	0	0.29890170294092	0.716097233936143
2	239561664	239564060	2	neutral	AA	100	somatic	0	0.707605569245584	0.853148386059657
2	239588020	239657504	2	neutral	AA	30.1105	germline	1	0.277705325437369	0.170197172275791
2	239717404	239722196	2	neutral	AA	100	somatic	0	0.0913726452025313	0.227031737704599
2	241090312	241092708	2	neutral	AA	100	somatic	0	0.128900079774041	0.342023968762885
2	241471276	241473672	2	neutral	AA	100	somatic	0	0.122491847274159	0.332649240164815
2	241559928	241562324	2	neutral	AA	100	somatic	0	0.416185987069937	0.652948997808385
2	241579096	241581492	2	neutral	AA	100	somatic	0	0.679741310905445	0.837946287349405
2	241588680	241591076	4	gain	AABB	100	somatic	0	0.0832803802764463	0.270064469585984
3	6608168	6612960	1	loss	A	-1	germline	1	0.0143396545603663	0.0367053758884666
3	18370132	18782244	2	neutral	AA	19.6519	somatic	0	0.00289977315294882	0.0327302731202773
3	25960660	25965452	2	neutral	AA	100	somatic	0	0.110593822457685	0.158862731489862
3	47447988	47452780	1	loss	A	-1	germline	1	0.014313481120932	0.0366444546643948
3	52414896	52419688	2	neutral	AA	54.5678	germline	1	0.493733770035048	0.83901384668662
3	55088832	55177484	2	neutral	AA	62.892	somatic	0	0.19086138020366	0.342701198698006
3	68585500	68590292	1	loss	A	-1	germline	1	0.01436307930048	0.0367389483048267
3	75670472	75864548	2	neutral	AA	0.299289	germline	1	0.000251761566027896	0.00341210269873826
3	84054076	84058868	1	loss	A	-1	germline	1	0.0143690338125863	0.036818790479039
3	89351632	89368404	1	loss	A	-1	germline	1	2.22786995333724e-05	1.23970488259406e-05
3	98691240	98696032	0	loss	-	-1	germline	1	0.014306063709106	0.0366313318706846
3	99180024	99184816	1	loss	A	-1	germline	1	0.0143300898683108	0.0367036979724309
3	99184816	99283052	2	neutral	AA	100	somatic	0	0.168182412146913	0.0378234385951963
3	114706104	114751628	2	neutral	AA	100	somatic	0	0.0950153771870531	0.0534891809534214
3	119811980	120219300	2	neutral	AA	86.5288	somatic	0	0.355535197659572	0.539023712743061
3	136301252	136308440	1	loss	A	-1	germline	1	0.0143135738600435	0.0366517158490764
3	138864972	138886536	2	neutral	AA	100	germline	1	0.000255908044395378	0.000102413818171332
3	139114156	139116552	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
3	162793824	162908832	1	loss	A	-1	somatic	0	1.37319191588539e-26	0
3	162999880	163004672	1	loss	A	-1	somatic	0	0.0143440209022177	0.0367031386819983
3	163045404	163052592	1	loss	A	-1	germline	1	0.0143513627148202	0.0367532247145564
3	172346676	172370636	2	neutral	AA	100	somatic	0	0.717301754483563	0.951525860071583
4	553476	555872	4	gain	-	-1	somatic	0	0.0832815554840007	0.270066510565722
4	10209356	10233316	1	loss	A	-1	germline	1	4.39895851813781e-08	4.24646118268868e-09
4	10389056	10401036	1	loss	A	-1	germline	1	0.000117013610782758	0.00011566701388821
4	12713176	12715572	0	loss	-	-1	somatic	0	0.0832668663550949	0.270040999128249
4	40293532	40295928	4	gain	-	-1	germline	1	0.0832750920086924	0.270055285316493
4	49089248	49091644	9	gain	-	-1	somatic	0	0.0832703915546107	0.270047121712792
4	49146752	49156336	51	gain	-	-1	somatic	0	0.00269995646848194	0.00495770263417872
4	49652308	49657100	9	gain	-	-1	somatic	0	0.0143075469201551	0.0366341236100484
4	68518412	68621440	1	loss	A	-1	germline	1	5.14649009782914e-20	0
4	69265964	69366596	1	loss	A	-1	germline	1	4.89090450167603e-08	8.28801727248418e-09
4	70619704	70624496	1	loss	A	-1	somatic	0	0.0143313895929866	0.036699503475926
4	74558728	74563520	1	loss	A	-1	somatic	0	0.0144541224965682	0.0370747420935019
4	91009664	91014456	1	loss	A	-1	somatic	0	0.0144471083416403	0.0370096228236325
4	114253260	114260448	1	loss	A	-1	somatic	0	0.00272047951545859	0.00498759560748741
4	118204264	118209056	1	loss	A	-1	somatic	0	0.0143604748858961	0.036717962397961
4	137163812	137180584	1	loss	A	-1	germline	1	2.35510756537939e-05	1.35684480293552e-05
4	166186560	166193748	1	loss	A	-1	somatic	0	0.00272378048448664	0.00501198373048617
4	171452968	171460156	1	loss	A	-1	germline	1	0.0146547716267674	0.0376833634321529
4	173482380	173487172	1	loss	A	-1	somatic	0	0.015194180037092	0.0393165563716837
4	185519884	185524676	1	loss	A	-1	somatic	0	0.0143776903437251	0.0368457188395338
4	186171596	186178784	1	loss	A	-1	germline	1	0.014386537785651	0.0368723836545779
4	186430364	186432760	4	gain	-	-1	germline	1	0.0832756795805649	0.270056305779622
5	414508	416904	4	gain	AABB	16.4162	somatic	0	0.0832815554840007	0.270066510565722
5	8139212	8199112	2	neutral	AA	42.9973	somatic	0	0.424462260220505	0.697415762150206
5	9500140	9512120	2	neutral	AA	43.8593	somatic	0	0.533253599389452	0.738865672416686
5	12811412	12820996	1	loss	A	-1	germline	1	0.000535654070570019	0.000675418432580344
5	13309780	13369680	2	neutral	AA	36.5653	somatic	0	0.969787441099629	0.796624576346776
5	13949512	14004620	2	neutral	AA	91.606	somatic	0	0.661609586868589	0.673317486883691
5	18933192	18957152	2	neutral	AA	54.5678	germline	1	0.0675948881239623	0.193644746971902
5	23902496	23904892	0	loss	-	-1	germline	1	0.0832662788335959	0.27003997870734
5	24870480	25174772	2	neutral	AA	100	somatic	0	0.578782300300146	0.345226718118617
5	26796864	26801656	1	loss	A	-1	somatic	0	0.0143635444183505	0.0367983252295522
5	36285024	36308984	2	neutral	AA	54.5876	somatic	0	0.582108570897873	0.890168344017721
5	42960280	42996220	2	neutral	AA	100	somatic	0	0.0100617920045354	0.0342961989155901
5	45370656	45377844	1	loss	A	-1	germline	1	0.00273051284317433	0.00504822346168976
5	46269156	46276344	1	loss	A	-1	somatic	0	0.00302513066351365	0.00596177845465662
5	46405728	46410520	1	loss	A	-1	somatic	0	0.0146881819819657	0.0376593324106271
5	50938960	50943752	1	loss	A	-1	germline	1	0.0143598238473383	0.0367291535761484
5	52908472	52913264	1	loss	A	-1	somatic	0	0.0157441860355024	0.0409868485315943
5	54511396	55867532	2	neutral	AA	15.3337	somatic	0	0.184414993645119	0.409094082473387
5	56282040	56286832	2	neutral	AA	100	germline	1	0.746377490813994	0.943994073357795
5	56833120	56840308	2	neutral	AA	100	somatic	0	0.397364542727398	0.224100848279281
5	58026328	58038308	1	loss	A	-1	germline	1	0.00011062766326567	9.65494823613744e-05
5	60705056	60709848	1	loss	A	-1	somatic	0	0.0150571442340102	0.0388988928499198
5	66388368	66397952	2	neutral	AA	9.1175	somatic	0	0.190987109997577	0.202167701070186
5	67897848	67988896	2	neutral	AA	36.3786	somatic	0	0.892576893217789	0.57969543053419
5	81047096	81102204	2	neutral	AA	54.5898	somatic	0	0.583706807726592	0.783429251490468
5	83594044	83632380	2	neutral	AA	18.5156	somatic	0	0.53712606897776	0.37119257582753
5	86917296	86922088	1	loss	A	-1	germline	1	0.01433250372547	0.0367109694266018
5	88223116	88256660	2	neutral	AA	54.568	germline	1	0.602625569984169	0.311297297854813
5	91203740	91206136	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
5	118537308	118544496	1	loss	A	-1	germline	1	0.00271792972587771	0.00500729183477355
5	120044392	120049184	1	loss	A	-1	somatic	0	0.0143608469196181	0.0367277545157025
5	122109744	122164852	2	neutral	AA	100	somatic	0	0.747347023774676	0.849044639173031
5	128070992	128075784	0	loss	-	-1	germline	1	0.0143066198973539	0.0366321693729493
5	128102140	128126100	2	neutral	AA	46.5057	somatic	0	0.991191829328238	0.828382369115138
5	134044220	134099328	2	neutral	AA	15.5625	somatic	0	0.117821149176903	0.480097688671766
5	134597696	134616864	2	neutral	AA	54.5682	somatic	0	0.947512855876952	0.975885728606922
5	137518420	137520816	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
5	142950152	143010052	2	neutral	AA	26.8043	somatic	0	0.304171213475968	0.628542409214
5	145475536	145489912	2	neutral	AA	100	somatic	0	0.188026602417684	0.350568864985234
5	145739096	145746284	1	loss	A	-1	somatic	0	0.0129892331397118	0.0720823380102289
5	148310004	148365112	1	loss	A	-1	germline	1	9.441428352625e-13	3.5527136788005e-15
5	153320040	153360772	2	neutral	AA	100	somatic	0	0.201627052932114	0.210477506230204
5	155033180	155054744	2	neutral	AA	100	somatic	0	0.339884033519344	0.262516413862006
5	156049084	156061064	1	loss	A	-1	germline	1	0.000108229830296296	9.14464534700343e-05
5	170887512	170918660	2	neutral	AA	100	germline	1	0.222945055173296	0.485720227135903
5	178583464	178585860	4	gain	AAAA	100	germline	1	0.083282730704989	0.270068551556719
5	178679304	178686492	1	loss	A	-1	somatic	0	0.00314671918433795	0.00649937267514278
5	180622460	180663192	2	neutral	AA	10.7663	germline	1	0.156412657243038	0.124033687254255
6	256372	383360	3	gain	AAB	0.443249	germline	1	1.85542345463752e-34	0
6	383360	388152	2	neutral	AA	100	germline	1	0.104167474753331	0.132823129303592
6	12097404	12152512	2	neutral	AA	54.5678	somatic	0	0.175609573182888	0.138492407137629
6	20849992	20864368	2	neutral	AA	54.5679	somatic	0	0.202050396279781	0.63431916770314
6	28196128	28224880	2	neutral	AA	54.5678	somatic	0	0.0891416858719714	0.200558612486737
6	32487364	32525700	0	loss	-	-1	germline	1	4.32148183078209e-08	4.12356404577707e-09
6	32532888	32667064	1	loss	A	-1	germline	1	6.29925178212439e-11	1.783018177548e-13
6	35657272	35662064	1	loss	A	-1	germline	1	0.0143246135995004	0.0366872020387338
6	37209880	37406352	2	neutral	AA	15.7254	somatic	0	0.660941616117344	0.310402504960927
6	48962260	48971844	1	loss	A	-1	germline	1	0.00053705482900321	0.000676901792358464
6	54063344	54070532	0	loss	-	-1	germline	1	0.0143063418008457	0.0366321693729493
6	56536016	56540808	2	neutral	AA	100	somatic	0	0.731604821142582	0.945796124805266
6	60230648	60237836	3	gain	-	-1	germline	1	0.0027061695590204	0.00496848147704765
6	60237836	60240232	4	gain	-	-1	germline	1	0.0832786174903029	0.270061408137487
6	76729504	76743880	1	loss	A	-1	germline	1	0.000534318967776939	0.000674235994112093
6	85534804	85568348	2	neutral	AA	36.3786	somatic	0	0.758972468859219	0.974712038947646
6	100277392	100298956	2	neutral	AA	100	somatic	0	0.688651365741312	0.538868105903727
6	103289164	103315520	1	loss	A	-1	germline	1	4.45237862886126e-08	4.42901348929325e-09
6	104122972	104221208	2	neutral	AA	100	germline	1	0.732449990006969	0.865207474196549
6	115302708	115400944	2	neutral	AA	28.8662	somatic	0	0.0318634009493344	0.013655136069507
6	116452788	116658844	2	neutral	AA	5.60797	germline	1	0.815954184778713	0.952988397580841
6	119780832	119800000	2	neutral	AA	92.4999	somatic	0	0.791253102387389	0.915060811148505
6	120954872	121019564	2	neutral	AA	31.8806	somatic	0	0.102333685275118	0.244199283862615
6	149445708	149560716	2	neutral	AA	54.5678	germline	1	0.778127916560073	0.905095966746705
6	154795976	154803164	1	loss	A	-1	somatic	0	0.00276469661624427	0.00509649038429505
6	154867856	154877440	2	neutral	AA	100	somatic	0	0.459312108550687	0.386396767357122
6	158629576	158648744	2	neutral	AA	100	somatic	0	0.630424788956511	0.90858263892121
6	158840424	158857196	2	neutral	AA	54.5678	somatic	0	0.208231600095591	0.116913545377116
6	170247780	170266948	2	neutral	AA	100	somatic	0	0.157492770581785	0.212014983017612
7	9761304	9766096	1	loss	A	-1	germline	1	0.0143135738600435	0.0366497607909121
7	20277348	20279744	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
7	31274988	31279780	0	loss	-	-1	germline	1	0.0143073615113559	0.036634402794227
7	57487228	57496812	3	gain	-	-1	germline	1	0.000534037254708589	0.000674205173879283
7	61045288	61057268	3	gain	-	-1	germline	1	0.000107764801265928	9.10970117422583e-05
7	61100396	61960560	2	neutral	AA	1.99814	germline	1	1.87397306591628e-05	4.47250425980039e-05
7	61960560	62358296	3	gain	AAB	0.599453	somatic	0	1.48849793282612e-12	1.86295423532101e-13
7	62401424	62406216	4	gain	-	-1	germline	1	0.0143092156947272	0.0366360779383663
7	62437364	62456532	3	gain	AAB	4.9726	germline	1	1.18752095621509e-05	0.000127091661408119
7	62518828	62537996	2	neutral	AA	11.994	germline	1	0.0849582182283859	0.14068758628429
7	62540392	62545184	1	loss	A	-1	germline	1	0.0143597308439552	0.0367899177385418
7	62545184	62571540	2	neutral	AA	35.6941	somatic	0	0.487025672324098	0.207311242437597
7	62815932	62825516	2	neutral	AA	100	somatic	0	0.240826592556739	0.31169215032292
7	64811800	64821384	2	neutral	AA	100	somatic	0	0.0201008594393205	0.0449279467093092
7	65319752	65360484	2	neutral	AA	56.1981	somatic	0	0.0035752002354447	0.0145131549901778
7	69354616	69436080	2	neutral	AA	60.7981	somatic	0	0.270310644532973	0.448021186048372
7	70955144	70962332	1	loss	A	-1	germline	1	0.0143103283064932	0.0366411037729141
7	92600608	92631756	2	neutral	AA	100	somatic	0	0.840816439189499	0.697404850065756
7	94728256	94737840	2	neutral	AA	100	germline	1	0.817320952410098	0.979610559821475
7	97133840	97181760	2	neutral	AA	100	somatic	0	0.0109352714830787	0.0160877757679402
7	97766384	97773572	1	loss	A	-1	germline	1	0.00271181913717752	0.00497683563202744
7	98113804	98506748	2	neutral	AA	24.469	somatic	0	2.47248203434109e-06	0.000231937408230576
7	100950668	100957856	4	gain	AABB	1.7848	germline	1	0.00270127407453915	0.00495991338355872
7	100957856	100960252	14	gain	AAAAAAAAABBBBB	11.1321	germline	1	0.0832680414081675	0.270043039978495
7	100960252	100969836	4	gain	AABB	0.311789	germline	1	0.000532369472639384	0.000671283266844958
7	100969836	100977024	3	gain	AAB	1.87068	germline	1	0.00442398636815127	0.0119983417137222
7	101259752	101283712	2	neutral	AA	28.8872	germline	1	0.234780173082101	0.409532404625176
7	102043244	102064808	2	neutral	AA	7.77494	somatic	0	0.00356509964218493	0.00577790868207018
7	102397852	102414624	2	neutral	AA	56.359	somatic	0	0.89936488166172	0.999946319320819
7	107074844	107125160	2	neutral	AA	100	somatic	0	0.552119237251124	0.573810978763273
7	116292256	116301840	1	loss	A	-1	germline	1	0.000535811732159491	0.000678264221105063
7	121843788	121848580	2	neutral	AA	54.5679	somatic	0	0.589830239390955	0.79160426888024
7	124810036	124819620	2	neutral	AA	54.5679	somatic	0	0.22652601334002	0.327378087132676
7	125164644	125198188	2	neutral	AA	54.5678	somatic	0	0.342181560097937	0.466154061001579
7	125787604	125811564	2	neutral	AA	59.9712	somatic	0	0.962717334366236	0.824146241561825
7	129314516	129340872	2	neutral	AA	54.765	somatic	0	0.479101336365847	0.794624492835627
7	134099328	134113704	1	loss	A	-1	germline	1	2.23825718935993e-05	1.25747741195337e-05
7	138445672	138622976	2	neutral	AA	40.5888	somatic	0	0.00188317536867456	0.0122044915227356
7	141009392	141047728	2	neutral	AA	54.5678	somatic	0	0.275692036984897	0.220869239127311
7	143846256	143851048	4	gain	AABB	19.6377	germline	1	0.014309586556837	0.03663663633464
7	148377092	148379488	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
7	152126832	152399976	2	neutral	AA	98.9168	somatic	0	0.998779445621632	0.991079345677352
7	152399976	152402372	4	gain	AAAB	17.2819	germline	1	0.083282730704989	0.270068551556719
7	152402372	152407164	13	gain	AAAAAAAAAAABB	2.19008	germline	1	0.014306990700116	0.036632727717096
7	152407164	152409560	4	gain	AAAB	8.93347	germline	1	0.0832809678785442	0.270065490074446
7	152414352	152416748	2	neutral	AA	7.05749	germline	1	0.64096917805976	0.815449528341324
7	154599504	154609088	1	loss	A	-1	germline	1	0.000536702674699747	0.000677139000534011
7	158150376	158152772	4	gain	AABB	8.42908	germline	1	0.0832756795805649	0.270056305779622
7	158567280	158593636	2	neutral	AA	15.7315	somatic	0	0.9183789036296	0.989636183729811
7	158593636	158596032	4	gain	AABB	10.7721	somatic	0	0.0832815554840007	0.270066510565722
7	159324416	159331604	1	loss	A	-1	germline	1	0.006428895503852	0.0229393946168407
8	644524	649316	1	loss	A	-1	somatic	0	0.0143662423639882	0.0367560245796247
8	4264880	4267276	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
8	5736024	5748004	1	loss	A	-1	germline	1	0.000109642274391006	9.55531060576886e-05
8	14356832	14366416	1	loss	A	-1	germline	1	0.000537613121592584	0.000681276842489864
8	25114872	25134040	1	loss	A	-1	germline	1	9.75808460889473e-07	2.31899490499288e-07
8	25208316	25210712	1	loss	A	-1	germline	1	0.0832715666479815	0.270049162596842
8	26219428	26233804	2	neutral	AA	36.3789	somatic	0	0.0577954509198835	0.280943232295881
8	32731756	32815616	2	neutral	AA	27.2839	somatic	0	0.752803884404392	0.844296904536337
8	33675780	33682968	2	neutral	AA	57.2202	somatic	0	0.305182547778908	0.413757782092275
8	33682968	33886628	2	neutral	AA	35.5701	somatic	0	0.79598921640146	0.812663029840038
8	38072440	38077232	1	loss	A	-1	somatic	0	0.0143377040206362	0.0366916748711615
8	42332528	42337320	1	loss	A	-1	somatic	0	0.0143716395962257	0.0367585446177247
8	43235820	43238216	5	gain	AAABB	6.9709	germline	1	0.0832721541997044	0.270050183043069
8	43238216	43240612	7	gain	AAAAABB	61.0605	germline	1	0.083270979099617	0.270048142153403
8	43240612	43243008	6	gain	AAAABB	1.79482	germline	1	0.0832715666479815	0.270049162596829
8	43655120	43659912	3	gain	AAA	18.1016	somatic	0	0.0143246135995004	0.0366603750606682
8	46494380	46496776	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
8	50117132	50126716	1	loss	A	-1	germline	1	0.000549864924294467	0.000714125557592316
8	57051156	57055948	1	loss	A	-1	somatic	0	0.0143493178264869	0.0367025793990218
8	85829512	85889412	3	gain	AAB	7.2443	germline	1	1.2175730723929e-16	0
8	86160160	86164952	1	loss	A	-1	somatic	0	0.0234144076879829	0.0650185515898565
8	104544668	104549460	1	loss	A	-1	somatic	0	0.0162228304512297	0.0424381915655198
8	115190096	116287464	2	neutral	AA	11.3546	somatic	0	0.000267306567950453	0.000914494871574245
8	120918932	120921328	1	loss	A	-1	somatic	0	0.0832821430928156	0.270067531059827
8	121350212	121378964	1	loss	A	-1	germline	1	2.03184892856151e-09	8.01643196268742e-11
8	126180548	126182944	0	loss	-	-1	somatic	0	0.0832668663550949	0.270040999128249
8	142588356	142612316	2	neutral	AA	35.5536	somatic	0	0.0278297858101188	0.132107064042589
9	23363396	23377772	1	loss	A	-1	germline	1	2.23714254991235e-05	1.24467270518069e-05
9	29092232	29099420	1	loss	A	-1	germline	1	0.0143221081261379	0.0366796552157285
9	39035632	39038028	7	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
9	40911700	40928472	6	gain	-	-1	germline	1	0.000532163789628793	0.000671068438708455
9	42387636	42390032	6	gain	AAABBB	12.3971	germline	1	0.0832715666479815	0.270049162596829
9	69122204	69129392	1	loss	A	-1	germline	1	0.00286408535930845	0.00538388490116126
9	71805724	71860832	2	neutral	AA	16.2311	somatic	0	0.00593828480005975	0.00139263272446521
9	75387744	75397328	1	loss	A	-1	germline	1	0.000561070228784706	0.000754253009144001
9	86088280	86119428	2	neutral	AA	89.166	somatic	0	0.00239564565628522	0.00568907444419153
9	88156028	88259056	2	neutral	AA	100	somatic	0	0.605468328365449	0.67833190564585
9	98916464	98921256	2	neutral	AA	100	somatic	0	0.713270499480776	0.790676741748924
9	101952196	101954592	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
9	103011228	103016020	1	loss	A	-1	somatic	0	0.0145447336162437	0.0373478620162122
9	105035848	105043036	1	loss	A	-1	germline	1	0.00272521090500425	0.00499809140745533
9	111960288	111969872	2	neutral	AA	37.9747	somatic	0	0.790931615217568	0.334030765700886
9	112985776	113021716	2	neutral	AA	54.6927	somatic	0	0.748429125156559	0.515487567614787
9	113450600	113472164	2	neutral	AA	31.2801	somatic	0	0.908380011688488	0.871138371267733
9	115554288	115585436	2	neutral	AA	100	germline	1	0.86435868807321	0.953094176798463
9	116771456	116936780	2	neutral	AA	21.8271	somatic	0	0.379544118649676	0.241347655297422
9	118309688	118345628	2	neutral	AA	29.6811	somatic	0	0.800809351459811	0.953771867476341
9	126757984	126762776	1	loss	A	-1	somatic	0	0.016717511526616	0.0439556429215978
9	127922440	127967964	2	neutral	AA	54.5682	somatic	0	0.109424285845455	0.358709507701348
9	128648428	128653220	1	loss	A	-1	somatic	0	0.014328604595998	0.0366860839051668
9	129422336	129424732	2	neutral	AA	14.7051	somatic	0	0.795340770172208	0.895701876510224
9	129424732	129443900	3	gain	AAB	0.208002	germline	1	1.08908668555943e-06	3.52005702475289e-07
9	129443900	129446296	2	neutral	AA	10.9136	somatic	0	0.24950372734187	0.492397222869445
9	134712704	134753436	2	neutral	AA	26.0667	somatic	0	0.0394997251257719	0.200989766416588
9	136567208	136603148	2	neutral	AA	100	somatic	0	0.396350951364614	0.520639183693651
9	136768472	136770868	1	loss	A	-1	somatic	0	0.0833003606319445	0.27009916777278
9	137326740	137329136	6	gain	AAAABB	3.04804	germline	1	0.0832721541997044	0.270050183043069
9	137353096	137357888	3	gain	AAB	35.287	germline	1	0.0143208091439925	0.0366603750606682
9	137357888	137362680	1	loss	A	-1	germline	1	0.0143209947065074	0.0366617718753194
9	137362680	137384244	2	neutral	AA	26.4928	somatic	0	0.248483102158862	0.371382980591094
9	137714892	137724476	2	neutral	AA	9.49324	somatic	0	0.335636907117865	0.573120268789977
9	137791564	137825108	2	neutral	AA	16.672	somatic	0	0.791451915987358	0.650087203338165
10	26624352	26629144	3	gain	-	-1	somatic	0	0.0143286974215391	0.0366768604407932
10	26935832	26940624	3	gain	-	-1	germline	1	0.0143185825592408	0.0366617718753157
10	39253668	39265648	1	loss	A	-1	germline	1	0.000669173436448919	0.00350753250919678
10	39330340	39354300	1	loss	A	-1	somatic	0	0.000147266913194027	0.000484992741141776
10	41836556	41838952	2	neutral	AA	13.8485	somatic	0	0.296219193878086	0.54168841298414
10	41858120	41882080	19	gain	AAAAAAAAAAAAABBBBBB	2.56721	germline	1	0.000532078926164575	0.000670996843653793
10	41882080	41884476	80	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8.13405	germline	1	0.0832662788335959	0.270039978707327
10	42298984	42322944	3	gain	AAA	0.855151	germline	1	5.06382412578585e-07	1.95113841305883e-07
10	46515944	46559072	4	gain	AABB	0.574511	germline	1	4.27255368542143e-12	2.54241072639161e-14
10	49829612	50229744	2	neutral	AA	100	germline	1	0.215085318447795	0.119757140313696
10	57089492	57182936	2	neutral	AA	1.9578	somatic	0	0.319570389597812	0.311540659792363
10	99206380	99335764	2	neutral	AA	54.2221	somatic	0	0.836096837	0.450041394177737
10	102412228	102450564	2	neutral	AA	100	somatic	0	0.183203253518008	0.2530741752041
10	115626168	115630960	1	loss	A	-1	germline	1	0.0143351036650486	0.0366771399099061
10	120466088	120470880	1	loss	A	-1	germline	1	0.0144888633712665	0.037179254486194
10	128463936	128466332	4	gain	AAAA	100	germline	1	0.0832750920086924	0.270055285316493
10	133009148	133011544	3	gain	AAB	12.0279	somatic	0	0.0832886070114417	0.27007875668059
10	133315836	133318232	1	loss	A	-1	germline	1	0.083270979099617	0.270048142153417
11	2314536	2379228	2	neutral	AA	32.9791	somatic	0	0.0964003279834496	0.32338268006044
11	13218732	13278632	2	neutral	AA	31.4305	somatic	0	0.171266034597729	0.152314724894879
11	18923608	18940380	3	gain	AAB	11.5393	germline	1	4.60868556425678e-06	1.66992467454108e-06
11	18945172	19151228	2	neutral	AA	9.37041	somatic	0	0.0835102284887967	0.140688697533744
11	24422428	24432012	1	loss	A	-1	germline	1	0.000543307392825514	0.000698172540122055
11	28984412	28991600	1	loss	A	-1	somatic	0	0.0143181187258564	0.036667639005326
11	37741792	37746584	1	loss	A	-1	somatic	0	0.0143999578007424	0.0368235577881052
11	38673836	38860724	2	neutral	AA	100	somatic	0	0.615799690677968	0.938024018215648
11	42945904	42950696	3	gain	AAB	10.56	somatic	0	0.0143260056961996	0.0366746247549905
11	46072684	46214048	2	neutral	AA	50.6574	somatic	0	0.0619718106721664	0.087654662059255
11	50174636	50179428	1	loss	A	-1	germline	1	0.014396322123576	0.0367991660710895
11	50184220	50368712	2	neutral	AA	54.1697	somatic	0	0.0207323644455778	0.0198082431681023
11	50761656	50799992	2	neutral	AA	2.0893	somatic	0	0.0259867412855794	0.0138452164578948
11	55246968	55249364	4	gain	AAAB	14.2082	germline	1	0.0832809678785442	0.270065490074446
11	55666268	55680644	0	loss	-	-1	germline	1	0.00270301489044207	0.00496791363441484
11	62430176	62650608	2	neutral	AA	100	somatic	0	0.0946710414647109	0.0244950748673005
11	62650608	62902188	2	neutral	AA	22.723	somatic	0	5.38795082771733e-14	9.82191772358476e-09
11	62902188	63561088	2	neutral	AA	67.5814	germline	1	0.000388045659694135	0.00501898617954677
11	64344580	64351768	3	gain	-	-1	germline	1	0.00271095448628195	0.00498224142287551
11	66941844	66946636	1	loss	A	-1	germline	1	0.0148561469974925	0.0382861891461012
11	81789856	81806628	1	loss	A	-1	germline	1	4.63927393011738e-06	1.68140845913101e-06
11	82144464	82151652	1	loss	A	-1	germline	1	0.00275759457887514	0.0051418972079722
11	86176932	86188912	1	loss	A	-1	germline	1	0.000109106784773605	9.20667393240482e-05
11	90458584	90463376	1	loss	A	-1	germline	1	0.0145393731258765	0.0373333837917167
11	96561196	96568384	1	loss	A	-1	germline	1	0.0145889063028231	0.0374815200407924
11	97867016	97917332	2	neutral	AA	68.8341	germline	1	0.745116578189987	0.957847583832671
11	102730896	102733292	3	gain	AAB	6.21222	somatic	0	0.0832933082984235	0.270086920982351
11	104043904	104048696	1	loss	A	-1	somatic	0	0.0143955764437195	0.036887267148787
11	104396116	104403304	1	loss	A	-1	germline	1	0.0027850778304152	0.00510591487778755
11	105076580	105651620	2	neutral	AA	26.0407	somatic	0	0.620965759057834	0.60580445317181
11	131264860	131267256	1	loss	A	-1	germline	1	0.0832750920086924	0.270055285316506
11	132053144	132060332	3	gain	AAB	7.14519	germline	1	0.00270507815387983	0.00496899258628525
12	2137232	2149212	1	loss	A	-1	germline	1	0.000108345891005906	9.16713925022128e-05
12	2254636	2257032	6	gain	AAAABB	15.4172	germline	1	0.0832715666479815	0.270049162596829
12	11383396	11390584	3	gain	AAB	8.65081	germline	1	0.00270448608688484	0.00496382692321773
12	18219184	18322212	2	neutral	AA	36.3795	somatic	0	0.0123630002639204	0.0500277021325026
12	18904440	18916420	2	neutral	AA	100	somatic	0	0.195122667318955	0.474940621265781
12	30084176	30091364	1	loss	A	-1	germline	1	0.00272076012569822	0.00500866465568195
12	31897948	31905136	1	loss	A	-1	germline	1	0.00270948007493653	0.00497274219356192
12	33234916	33242104	1	loss	A	-1	germline	1	0.00270986979058011	0.00497058301213815
12	34102268	34114248	1	loss	A	-1	germline	1	0.000538046623683612	0.00067955676920195
12	39711304	39716096	1	loss	A	-1	somatic	0	0.0149948074809958	0.0387104096889047
12	40480420	40506776	2	neutral	AA	6.65124	somatic	0	0.0146952234660535	0.0481202491637364
12	45514416	45516812	0	loss	-	-1	germline	1	0.0832698040129626	0.270046101275009
12	49283324	49297700	3	gain	AAA	68.4909	germline	1	2.2236344738528e-05	1.23608331282776e-05
12	50318396	50447780	2	neutral	AA	40.7981	somatic	0	4.90281235718865e-07	8.326087986954e-06
12	55108000	55151128	2	neutral	AA	100	somatic	0	0.86788736604274	0.79759259547112
12	55790860	55814820	2	neutral	AA	54.568	somatic	0	0.332919796458382	0.149212534601911
12	57523168	57693284	2	neutral	AA	19.7574	somatic	0	0.509552550322866	0.68251842991682
12	59540600	59552580	1	loss	A	-1	germline	1	0.000113274475144741	0.000103929278691739
12	60393576	60403160	2	neutral	AA	36.3786	somatic	0	0.0114563771977038	0.0140051476791551
12	64541052	64802216	2	neutral	AA	31.7817	somatic	0	1.45399887702213e-05	0.000398823297595108
12	64802216	64804612	2	neutral	AA	-1	germline	1	NA	NA
12	64804612	64984312	2	neutral	AA	100	germline	1	0.0249606509746231	0.0420798533470577
12	69869756	69884132	2	neutral	AA	54.5683	somatic	0	0.218694291443691	0.251189348883397
12	70320204	70380104	2	neutral	AA	100	germline	1	0.775782861550042	0.992859708907395
12	71729052	71743428	2	neutral	AA	100	somatic	0	0.385745796231874	0.785700891443262
12	74381424	74455700	2	neutral	AA	54.8594	somatic	0	0.329432272095858	0.223007014356968
12	90091996	90096788	1	loss	A	-1	germline	1	0.0143254488432002	0.0366888792949882
12	96824756	96827152	1	loss	A	-1	germline	1	0.083270979099617	0.270048142153417
12	99400456	99407644	1	loss	A	-1	germline	1	0.00271584052796593	0.00497945250114262
12	101652696	101662280	2	neutral	AA	100	somatic	0	0.0797020123609522	0.253606259070602
12	120926120	120928516	0	loss	-	-1	somatic	0	0.0832680414081675	0.270043039978508
12	127122176	127126968	1	loss	A	-1	somatic	0	0.0143770386168242	0.0368056130812815
12	127922440	127955984	2	neutral	AA	54.5686	germline	1	0.338808528870749	0.539897917422269
12	132786320	132877368	2	neutral	AA	7.32127	somatic	0	0.00327590063064685	0.044213464725112
12	132973208	133078632	2	neutral	AA	17.1343	somatic	0	0.0129701206629275	0.0448185397633464
13	22019240	22024032	0	loss	-	-1	germline	1	0.0143073615113559	0.036634402794227
13	38482156	38486948	1	loss	A	-1	germline	1	0.0143121828290226	0.0366444546643948
13	39359092	39361488	1	loss	A	-1	somatic	0	0.0833132911663002	0.270121621274615
13	45423368	45425764	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
13	63029176	63043552	3	gain	-	-1	germline	1	2.21732890407483e-05	1.23481251514956e-05
13	63057928	63065116	3	gain	-	-1	germline	1	0.00270222041043447	0.00496218175750507
13	63065116	63067512	7	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
13	63067512	63069908	3	gain	-	-1	germline	1	0.0833426847910714	0.270172657027339
13	82592516	82597308	1	loss	A	-1	somatic	0	0.0143581498677291	0.0367400678478779
13	84705788	84708184	1	loss	A	-1	somatic	0	0.0833068256959021	0.270110394353401
13	86754368	86756764	2	neutral	AA	100	somatic	0	0.113756096385524	0.319525970535417
13	87566612	87571404	2	neutral	AA	54.5678	somatic	0	0.534144790675678	0.755313565497188
13	87624116	87628908	1	loss	A	-1	somatic	0	0.0144675980928092	0.0370428747031878
13	89298920	89315692	2	neutral	AA	54.5715	somatic	0	0.484910060318839	0.668863636705723
13	89481016	89485808	2	neutral	AA	36.3915	somatic	0	0.0205174532601857	0.0476551159167024
13	90310032	90314824	2	neutral	AA	32.7033	somatic	0	0.649138429808068	0.919225985552869
13	93110956	93158876	2	neutral	AA	55.8903	somatic	0	0.475203735787162	0.198143815619189
13	93338576	93393684	2	neutral	AA	27.2839	somatic	0	0.240604015794047	0.558065671149667
13	93398476	93432020	2	neutral	AA	35.5635	somatic	0	0.464992543588702	0.682612524731058
13	97229680	97272808	2	neutral	AA	36.3787	somatic	0	0.018777292341515	0.0202470352810694
13	98053904	98063488	2	neutral	AA	54.5678	somatic	0	0.140348741433079	0.351790410243506
13	98602588	98607380	1	loss	A	-1	germline	1	0.0143243351944799	0.0366701537410802
13	99146480	99177628	2	neutral	AA	100	somatic	0	0.853113889317152	0.805873875639556
13	99776628	99802984	2	neutral	AA	100	somatic	0	0.503067342808717	0.540815703845893
13	100406776	100425944	2	neutral	AA	54.5678	somatic	0	0.652398281249525	0.897051508734919
13	104053488	104084636	2	neutral	AA	100	germline	1	0.702602000088983	0.848186813681281
13	104523104	104544668	2	neutral	AA	38.8349	somatic	0	0.662038500474452	0.505700869813955
13	105946328	105960704	2	neutral	AA	54.5678	somatic	0	0.149634045049945	0.0892555977276892
13	106348856	106363232	2	neutral	AA	59.3457	somatic	0	0.919294250375154	0.979397792005543
13	106756176	106818472	2	neutral	AA	32.9754	somatic	0	0.847097794881111	0.548074587943209
13	109216868	109219264	1	loss	A	-1	somatic	0	0.0832715666479815	0.270049162596842
13	109784720	109787116	1	loss	A	-1	somatic	0	0.083270979099617	0.270048142153417
13	110676032	110740724	2	neutral	AA	14.6991	somatic	0	0.000640541611383845	0.00850938323456529
13	112861184	112875560	2	neutral	AA	8.82932	somatic	0	0.378763448918987	0.268146006692041
13	113261316	113263712	3	gain	AAA	13.4214	somatic	0	0.0832891946605591	0.270079777208458
13	113508104	113512896	2	neutral	AA	36.3786	germline	1	0.465143913360326	0.889639106758801
13	113913028	114054392	2	neutral	AA	11.8783	somatic	0	0.0976325263942876	0.138104620592131
14	16091536	16093932	9	gain	-	-1	germline	1	0.0832698040129626	0.270046101274996
14	16093932	16096328	4	gain	-	-1	germline	1	0.0832762671557958	0.270057326245566
14	34346660	34351452	1	loss	A	-1	somatic	0	0.014361870056188	0.0367935607783066
14	49019764	49024556	1	loss	A	-1	germline	1	0.0143367752744524	0.0367215992036075
14	53145676	53217556	2	neutral	AA	100	somatic	0	0.224802993626736	0.370684426629932
14	53466740	53476324	2	neutral	AA	100	somatic	0	0.68249370272447	0.870327412997045
14	54243044	54247836	1	loss	A	-1	germline	1	0.0143093084094598	0.0366397076472573
14	60590048	60592444	0	loss	-	-1	germline	1	0.0832680414081675	0.270043039978508
14	64217592	64409272	2	neutral	AA	33.3323	somatic	0	1.86699584094926e-05	0.000294581161422114
14	65137656	65142448	1	loss	A	-1	somatic	0	0.0145357064256747	0.0372939484441187
14	66539316	66558484	2	neutral	AA	54.5678	somatic	0	0.990926042007319	0.994790703543948
14	71820100	71836872	2	neutral	AA	36.3786	germline	1	0.123698754380013	0.19604329606575
14	72939032	72960596	2	neutral	AA	54.5678	somatic	0	0.0249275483295344	0.135191093030222
14	79640644	79647832	1	loss	A	-1	germline	1	0.00270936147599271	0.00496848147704843
14	84830380	84832776	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
14	85441360	85462924	2	neutral	AA	36.6704	somatic	0	0.626817835385777	0.512443353544773
14	86411740	86452472	2	neutral	AA	15.4851	somatic	0	0.244133789957776	0.161875748769122
14	86986780	86996364	1	loss	A	-1	germline	1	0.0005377779129266	0.000677004916774693
14	89191100	89193496	1	loss	A	-1	somatic	0	0.0854122061265468	0.273747199419287
14	99927576	99929972	7	gain	AAAABBB	22.2373	germline	1	0.083270979099617	0.270048142153403
14	100044980	100071336	2	neutral	AA	100	somatic	0	0.72962875179398	0.739999424549039
14	101710200	101726972	1	loss	A	-1	somatic	0	3.04538095901855e-05	9.02941400467983e-05
14	102086372	102129500	2	neutral	AA	85.4865	somatic	0	0.732532699254708	0.951415394704743
14	103075920	103085504	2	neutral	AA	27.2839	somatic	0	0.722189666062073	0.793226635270652
15	0	17081084	7	gain	AAAAABB	-1	germline	1	NA	NA
15	17081084	17083480	13	gain	-	-1	germline	1	0.0832680414081675	0.270043039978495
15	17083480	20339644	7	gain	AAAAABB	-1	somatic	0	0.0647815818159812	0.25139449058915
15	20339644	20342040	13	gain	AAAAAAAAAAAAA	100	germline	1	0.0832680414081675	0.270043039978495
15	20342040	20651124	7	gain	AAAAABB	2.90458	germline	1	9.13780549615565e-11	1.38433708940511e-12
15	20651124	20672688	7	gain	AAAABBB	7.11326	germline	1	9.63931978648215e-07	2.25180152746418e-07
15	20672688	22225296	7	gain	AAAAABB	-1	germline	1	NA	NA
15	22225296	22299572	4	gain	AABB	10.1802	germline	1	9.64533077167223e-07	2.25303743661698e-07
15	23425692	23428088	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
15	23437672	23507156	2	neutral	AA	3.34555	germline	1	0.689599309798451	0.875201127470254
15	25526984	25529380	4	gain	AAAA	4.4369	germline	1	0.0832815554840007	0.270066510565722
15	38951772	39006880	2	neutral	AA	50.0015	somatic	0	0.18812920546615	0.333250059550837
15	44936980	44941772	1	loss	A	-1	germline	1	0.0143317609619925	0.0366771399099061
15	48346488	48365656	2	neutral	AA	54.5678	somatic	0	0.837023656879247	0.592045228895236
15	60817668	60824856	2	neutral	AA	100	somatic	0	0.148417026991845	0.200893972967653
15	61414272	61438232	2	neutral	AA	100	somatic	0	0.427995984072381	0.668479283216866
15	63405348	63426912	2	neutral	AA	54.5678	somatic	0	0.492569686348693	0.666061248519564
15	76592932	76602516	1	loss	A	-1	germline	1	0.000535590032897428	0.000675140642092731
15	77038588	77040984	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
15	80905732	80915316	2	neutral	AA	100	germline	1	0.0210516751390371	0.0609970880433764
15	85877432	85954104	2	neutral	AA	9.47448	somatic	0	0.146237687697213	0.16312300807777
15	88953896	88965876	2	neutral	AA	54.5679	somatic	0	0.837418338552628	0.978610508101756
15	95684260	95696240	3	gain	AAB	7.83452	germline	1	0.000107875817836364	9.10970117422583e-05
16	845788	848184	4	gain	AAAA	22.1913	germline	1	0.0832786174903029	0.270061408137487
16	1298632	1435204	2	neutral	AA	15.4958	somatic	0	0.107340184923436	0.345317985300652
16	5644976	5666540	2	neutral	AA	6.25045	germline	1	0.150288285944308	0.393547644077089
16	19484272	19501044	2	neutral	AA	54.5678	germline	1	0.250170554663936	0.221984978219056
16	21523268	21583168	4	gain	AABB	3.86731	germline	1	9.23354127769551e-09	5.58982082843329e-10
16	22613448	22632616	4	gain	AABB	8.31826	germline	1	9.6473925114541e-07	2.25475506598904e-07
16	22632616	22663764	4	gain	AAAB	4.34017	germline	1	1.97683076268868e-09	7.56167350957071e-11
16	22663764	22699704	4	gain	AABB	29.7891	germline	1	1.97529063931726e-11	1.87627691161651e-13
16	23921664	23931248	1	loss	A	-1	germline	1	0.000551679904594645	0.000724198933039877
16	24154076	24163660	2	neutral	AA	45.8399	somatic	0	0.113936720468068	0.456543016289031
16	25019032	25040596	2	neutral	AA	100	somatic	0	0.00652451731453085	0.0230098460834192
16	27115532	27139492	2	neutral	AA	11.08	somatic	0	0.0306558029888316	0.0154162220412323
16	28107476	28141020	2	neutral	AA	100	somatic	0	0.386914162345709	0.314290294643879
16	28141020	28234464	2	neutral	AA	61.7714	somatic	0	0.000130843990267376	0.000377182029778433
16	28883780	28888572	2	neutral	AA	100	somatic	0	0.172471097254352	0.245940645387407
16	30884440	30901212	2	neutral	AA	36.3786	somatic	0	0.0428850280616386	0.0483647362055118
16	34049556	34051952	2	neutral	AA	100	germline	1	0.48466302634648	0.708349135770372
16	34061536	34066328	15	gain	AAAAAAAAAABBBBB	5.36792	germline	1	0.014306990700116	0.036632727717096
16	34068724	34083100	2	neutral	AA	18.907	germline	1	0.0137291370195628	0.0562810598920407
16	34083100	34085496	12	gain	AAAAAAAAAAAA	85.4776	germline	1	0.0832680414081675	0.270043039978495
16	34095080	34099872	7	gain	AAAAABB	10.3798	germline	1	0.0143079177441119	0.0366341236100484
16	34099872	34159772	2	neutral	AA	7.60872	germline	1	0.00195773524323123	0.013697433240663
16	34159772	34193316	2	neutral	AA	-1	germline	1	0.0143132029067775	0.0366475265504463
16	34193316	34210088	2	neutral	AA	3.49978	germline	1	0.0058035301426447	0.0482912001132605
16	34210088	34212484	4	gain	AAAB	2.12885	germline	1	0.0832803802764463	0.270064469585984
16	34212484	34219672	2	neutral	AA	-1	germline	1	NA	NA
16	34219672	34720436	2	neutral	AA	100	germline	1	3.27905433747282e-12	2.6199789004977e-09
16	34720436	34725228	1	loss	A	-1	germline	1	0.0143733149629372	0.0367507049955259
16	34725228	34957640	2	neutral	AA	1.16293	germline	1	1.99786356723127e-13	4.66515714947491e-13
16	36122096	36126888	4	gain	-	-1	germline	1	0.0143097719910714	0.0366388699942005
16	48475872	48478268	1	loss	A	-1	somatic	0	0.0832698040129626	0.270046101275009
16	52620952	52625744	2	neutral	AA	100	somatic	0	0.567680708302819	0.616546451568211
16	55987332	56004104	2	neutral	AA	41.6819	somatic	0	0.333922046518373	0.819281683915162
16	56660608	56665400	2	neutral	AA	100	somatic	0	0.491855266847499	0.753272121614799
16	64205612	64663248	2	neutral	AA	32.4512	somatic	0	0.0697441832385848	0.109283961332665
16	70150088	70162068	4	gain	AAAB	3.25002	germline	1	0.000107588702369095	9.08526384260089e-05
16	74371840	74374236	4	gain	AAAB	86.1779	germline	1	0.0832809678785442	0.270065490074446
16	75279924	75459624	2	neutral	AA	100	somatic	0	0.00456467161218555	0.00180682172831537
16	78337220	78351596	1	loss	A	-1	germline	1	2.22923442106041e-05	1.24234255488576e-05
16	78497752	78528900	2	neutral	AA	100	somatic	0	0.0321373914753051	0.0585130201692639
16	84181064	84262528	2	neutral	AA	100	somatic	0	0.711070664502062	0.713533796747631
16	89888336	90036888	2	neutral	AA	5.48279	somatic	0	0.028335360784018	0.106255998797035
17	5019620	5309536	2	neutral	AA	6.65623	somatic	0	3.09250131882548e-08	1.38699030727274e-06
17	12154908	12195640	2	neutral	AA	100	somatic	0	0.549479029884917	0.286414076332418
17	21290856	21302836	4	gain	AABB	0.262791	germline	1	0.000107590657530958	9.08491766214992e-05
17	21853916	21858708	5	gain	-	-1	germline	1	0.0143089375537091	0.03663663633464
17	21885064	21968924	0	loss	-	-1	germline	1	1.26293658208817e-24	0
17	21968924	21976112	7	gain	AAAAABB	-1	germline	1	NA	NA
17	21976112	21978508	20	gain	-	-1	germline	1	0.0832680414081675	0.270043039978495
17	21978508	22158208	7	gain	AAAAABB	0.287391	germline	1	4.26792303395378e-12	2.53130849614536e-14
17	22158208	22160604	4	gain	AABB	17.2422	germline	1	0.0832821430928156	0.270067531059813
17	26782488	26792072	3	gain	-	-1	germline	1	0.000532650365853814	0.000671805260772151
17	26808844	26811240	5	gain	-	-1	germline	1	0.0832745044401782	0.270054264856179
17	26813636	26823220	3	gain	-	-1	germline	1	0.000532915054352799	0.000672594090275758
17	26823220	26825616	6	gain	-	-1	germline	1	0.0832715666479815	0.270049162596829
17	26825616	26878328	3	gain	-	-1	germline	1	2.36412851874365e-13	7.67275132318446e-13
17	26935832	26940624	14	gain	AAAAAAAAABBBBB	4.7431	germline	1	0.0143070834021312	0.0366330068919636
17	39958092	39979656	2	neutral	AA	100	germline	1	0.50342827013816	0.434881241475785
17	41719152	41738320	2	neutral	AA	27.3707	somatic	0	0.0388231693159819	0.239508736526349
17	41992296	42025840	2	neutral	AA	54.5678	somatic	0	0.946391213941496	0.984008926891312
17	52062684	52649704	2	neutral	AA	100	somatic	0	0.0166671058790726	0.087971368988235
17	62791972	62806348	2	neutral	AA	18.1893	somatic	0	0.954972003534257	0.802478110220906
17	65108904	65144844	2	neutral	AA	20.267	somatic	0	0.20567818875668	0.595103837143252
17	65410800	65429968	2	neutral	AA	54.5681	somatic	0	0.838343176763322	0.749393563476376
17	69232420	69237212	2	neutral	AA	100	somatic	0	0.956502995609331	0.991028153843939
17	69745164	69769124	2	neutral	AA	100	germline	1	0.0729190699193511	0.0263408387559705
17	71959068	71968652	2	neutral	AA	100	somatic	0	0.120512998089378	0.498769853535821
17	77134428	77218288	2	neutral	AA	11.0173	somatic	0	0.565914530277165	0.365459972491283
17	82585328	82587724	4	gain	AABB	31.086	somatic	0	0.083282730704989	0.270068551556719
18	5304744	5309536	1	loss	A	-1	germline	1	0.0154073583379619	0.0399108062186977
18	5323912	5326308	1	loss	A	-1	germline	1	0.0832715666479815	0.270049162596842
18	11507988	11512780	1	loss	A	-1	germline	1	0.0143987458183877	0.0368518923480461
18	29592996	29597788	1	loss	A	-1	germline	1	0.0148803139196895	0.0383329297092712
18	29636124	29643312	1	loss	A	-1	germline	1	0.00278997264321613	0.00524503285545463
18	30489100	30493892	1	loss	A	-1	somatic	0	0.0149945659341406	0.0385662128613684
18	30757452	30759848	1	loss	A	-1	somatic	0	0.0835651724878673	0.270558715037313
18	40870968	40873364	1	loss	A	-1	somatic	0	0.08346063761574	0.27037789176331
18	41347772	41350168	1	loss	A	-1	somatic	0	0.0833156423472186	0.270125703875866
18	47031084	47074212	2	neutral	AA	100	somatic	0	0.0667546339535173	0.0779734225931832
18	49439064	49441460	1	loss	A	-1	somatic	0	0.0833991440974348	0.270270665399776
18	50167448	50172240	1	loss	A	-1	germline	1	0.0158115338717317	0.0411018495422496
18	51449308	51451704	1	loss	A	-1	somatic	0	0.0834032621333684	0.270277812858418
18	56610292	56689360	2	neutral	AA	21.9543	somatic	0	0.480288193268581	0.394706111997111
18	56842704	56890624	2	neutral	AA	37.003	somatic	0	0.598220707217798	0.388688643674352
18	66055324	66064908	1	loss	A	-1	germline	1	0.000537031784291274	0.000680644293610366
18	66239816	66244608	1	loss	A	-1	germline	1	0.0143439279891183	0.0367347502841897
18	70209988	70236344	2	neutral	AA	54.5704	somatic	0	0.633338196952734	0.835367934696097
18	74613836	74618628	3	gain	-	-1	germline	1	0.0228634716717097	0.0632940944740746
18	76966708	76969104	3	gain	AAA	44.1526	germline	1	0.0833109400391281	0.270117538718389
18	77553728	77556124	1	loss	A	-1	germline	1	0.0834132637634539	0.270295171546543
18	78902676	78907468	1	loss	A	-1	germline	1	0.014483802173729	0.0370990112164398
18	79199780	79202176	3	gain	AAB	16.3492	germline	1	0.083317405768179	0.270128765856347
18	79518448	79523240	1	loss	A	-1	germline	1	0.0212207187664147	0.0579949345226582
18	79863472	79868264	1	loss	A	-1	somatic	0	0.0150490973569463	0.0387884069842716
19	534308	555872	2	neutral	AA	29.9281	somatic	0	0.0181552211942259	0.150080970602231
19	7216752	7231128	2	neutral	AA	100	somatic	0	0.0190783726598522	0.0680048973484916
19	7329364	7449164	2	neutral	AA	20.654	somatic	0	0.000300028971537624	0.000213477982488719
19	7449164	7451560	13	gain	AAAAAAAAABBBB	24.805	germline	1	0.0832680414081675	0.270043039978495
19	8886764	8917912	2	neutral	AA	5.98993	somatic	0	0.0974621580820266	0.126301988591003
19	9195848	9246164	2	neutral	AA	100	somatic	0	0.0797226935297413	0.0411711053779255
19	11450484	11551116	2	neutral	AA	67.2132	somatic	0	3.29753807216929e-05	0.000120782525266705
19	14145984	14172340	2	neutral	AA	36.3789	somatic	0	0.93541657303933	0.601581129260256
19	20040144	20054520	2	neutral	AA	100	somatic	0	0.370913212258336	0.136159434484432
19	22956076	22960868	1	loss	A	-1	somatic	0	0.0144777120592769	0.0371433523109636
19	23114212	23176508	2	neutral	AA	42.2106	somatic	0	0.430649237348292	0.637858779620611
19	23811448	23816240	2	neutral	AA	36.3787	somatic	0	0.0591676083630085	0.153796931336324
19	24328984	24331380	2	neutral	AA	54.9804	somatic	0	0.09882776063797	0.296098784753484
19	24331380	24352944	3	gain	AAB	0.626258	germline	1	2.04257142918993e-07	3.05839912284611e-08
19	24352944	24405656	4	gain	AABB	3.89914	germline	1	4.37137489114727e-14	1.11022302462516e-16
19	24415240	24420032	3	gain	AAB	4.51981	germline	1	0.0145762734823765	0.0374388178639374
19	27338360	27340756	5	gain	AAABB	1.57348	germline	1	0.0832727417547854	0.270051203492125
19	27345548	27379092	6	gain	AAAABB	0.158429	germline	1	1.9751730665213e-09	7.55648876804571e-11
19	27379092	27383884	4	gain	AAAB	8.88713	germline	1	0.014310421027585	0.0366391492100232
19	27383884	27398260	6	gain	AAAABB	0.266627	germline	1	2.21019077858301e-05	1.22940449847064e-05
19	27398260	27400656	4	gain	AAAB	60.5809	germline	1	0.0832815554840007	0.270066510565722
19	28572300	28811900	2	neutral	AA	100	somatic	0	0.83309713140737	0.990172811223585
19	29511532	29513928	1	loss	A	-1	somatic	0	0.0832698040129626	0.270046101275009
19	32537680	32707796	2	neutral	AA	15.9913	somatic	0	6.71515030591621e-06	0.000145866255897853
19	35362564	35369752	1	loss	A	-1	somatic	0	0.00271007314081275	0.0049808183247787
19	44781240	44788428	2	neutral	AA	54.5678	somatic	0	0.00662258816442377	0.0125781459091406
19	50574768	50579560	1	loss	A	-1	somatic	0	0.0143346393596145	0.0366763015081679
19	50809576	50831140	2	neutral	AA	7.19998	somatic	0	0.471523797751499	0.929597431793949
19	50903020	50905416	0	loss	-	-1	somatic	0	0.0832674538799521	0.270042019551971
19	52426876	52501152	2	neutral	AA	28.4495	germline	1	0.00540736581877347	0.0143642063565165
19	57166164	57937676	2	neutral	AA	100	somatic	0	0.001486586863231	0.000344337017495033
20	59900	67088	6	gain	-	-1	germline	1	0.0143081031592696	0.0366346819802599
20	2539760	2570908	2	neutral	AA	100	germline	1	0.996729135998246	0.889059541119706
20	4645844	4660220	2	neutral	AA	100	somatic	0	0.930083832068608	0.907374846705939
20	6943608	6953192	2	neutral	AA	100	somatic	0	0.776304607813502	0.349958608675742
20	7044240	7084972	2	neutral	AA	100	somatic	0	0.52273136078008	0.174755447135391
20	7418016	7422808	1	loss	A	-1	somatic	0	0.0143649398516728	0.0367445463185493
20	8831656	8901140	2	neutral	AA	100	somatic	0	0.981354900836351	0.985653526378952
20	14565284	14579660	2	neutral	AA	54.5785	somatic	0	0.294149700873984	0.147156611828881
20	17601016	17608204	2	neutral	AA	100	somatic	0	0.715258276578798	0.735771376529315
20	20933852	20943436	2	neutral	AA	54.5678	somatic	0	0.255852923997791	0.732902540379228
20	21080008	21501704	2	neutral	AA	44.126	somatic	0	0.59019005722199	0.315296708299736
20	23571848	23579036	2	neutral	AA	100	somatic	0	0.415477814806661	0.698073835294375
20	25864820	25869612	2	neutral	AA	4.96071	somatic	0	0.618868806993165	0.935836610225642
20	25972640	26214636	2	neutral	AA	9.09654	somatic	0	0.229266210237352	0.575728995812331
20	26214636	26281724	2	neutral	AA	-1	somatic	0	0.655651089921613	0.910993042253831
20	26281724	26308080	2	neutral	AA	6.7571	germline	1	0.5252503000005	0.353967858298893
20	26308080	26315268	2	neutral	AA	-1	germline	1	NA	NA
20	26315268	26322456	1	loss	A	-1	germline	1	0.0143479237317984	0.0367565845750293
20	26322456	26379960	2	neutral	AA	3.38334	germline	1	0.00517641784766423	0.0638115976358004
20	28557924	28560320	6	gain	-	-1	germline	1	0.0832715666479815	0.270049162596829
20	28773564	28787940	7	gain	-	-1	germline	1	0.00270037871415247	0.00495821272692598
20	28802316	28804712	4	gain	-	-1	germline	1	0.0832750920086924	0.270055285316493
20	28804712	28823880	11	gain	-	-1	germline	1	4.59460147478558e-06	1.66365640030808e-06
20	28869404	28871800	7	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
20	28953264	28955660	5	gain	-	-1	germline	1	0.0832721541997044	0.270050183043069
20	29255160	29259952	3	gain	-	-1	germline	1	0.0144182416729885	0.0369538859499734
20	29262348	29264744	8	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
20	29264744	29269536	4	gain	-	-1	germline	1	0.0143103283064932	0.0366388699942005
20	29271932	29389336	3	gain	-	-1	germline	1	1.95171808752132e-12	3.08086889333481e-13
20	29408504	29410900	5	gain	-	-1	germline	1	0.0832733293132247	0.270052223943994
20	29885308	29894892	5	gain	-	-1	germline	1	0.00270048006209167	0.00495838276853244
20	30812560	30814956	7	gain	-	-1	germline	1	0.083270979099617	0.270048142153403
20	30939548	30941944	5	gain	-	-1	germline	1	0.0832739168750223	0.270053244398679
20	31066536	31068932	59	gain	-	-1	germline	1	0.0832662788335959	0.270039978707327
20	31164772	31167168	4	gain	-	-1	germline	1	0.0832762671557958	0.270057326245566
20	31183940	31188732	17	gain	-	-1	germline	1	0.0143068979986307	0.036632727717096
20	31188732	31191128	4	gain	-	-1	germline	1	0.0832792050823255	0.270062428617505
20	31191128	31234256	3	gain	AAA	5.19218	germline	1	0.000160470707009913	0.000306035221031009
20	31234256	31236652	4	gain	AABB	18.4648	germline	1	0.0832762671557958	0.270057326245566
20	31236652	31241444	3	gain	AAB	9.06527	germline	1	0.0143775972382868	0.0367582646060237
20	31241444	31243840	49	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	69.7669	germline	1	0.0832662788335959	0.270039978707327
20	31243840	31251028	2	neutral	AA	3.86325	somatic	0	0.0201463310412629	0.0968405109388486
20	32937812	32942604	1	loss	A	-1	somatic	0	0.0146339064589046	0.0375933161560883
20	33460140	33517644	2	neutral	AA	54.5678	somatic	0	0.00058641968200041	0.000524183719678106
20	35393712	35420068	2	neutral	AA	37.4024	somatic	0	0.00389174691409027	0.00831070060668382
20	39450140	39454932	2	neutral	AA	100	somatic	0	0.743956238780855	0.951694275257901
20	39991636	40029972	2	neutral	AA	54.5686	somatic	0	0.0820660063302884	0.215901668819923
20	40777524	40782316	2	neutral	AA	100	somatic	0	0.74957079581225	0.767102846810057
20	41160884	41165676	2	neutral	AA	54.5678	somatic	0	0.892940922605573	0.985046908850731
20	48595672	48600464	2	neutral	AA	10.9144	somatic	0	0.121048214160514	0.161011498686788
20	48950280	49026952	2	neutral	AA	100	somatic	0	0.740087751741129	0.507710168265329
20	49961392	49968580	2	neutral	AA	36.3786	somatic	0	0.155596653870974	0.301102677087057
20	51233668	51240856	2	neutral	AA	21.8275	somatic	0	0.931458913960767	0.852884289540698
20	51986012	52012368	2	neutral	AA	27.2889	somatic	0	0.0335867598179661	0.126210993053624
20	58888888	58893680	1	loss	A	-1	somatic	0	0.0143837433380028	0.0367484653721484
20	61543656	61591576	2	neutral	AA	16.3378	germline	1	0.662840243491891	0.458612207454615
20	62063588	62065984	1	loss	A	-1	somatic	0	0.0832880193656828	0.27007773615555
20	64088208	64090604	4	gain	AAAA	16.7453	germline	1	0.083276854734385	0.270058346714324
21	0	10271652	6	gain	AAAABB	-1	germline	1	9.13614966633838e-11	1.38422606710265e-12
21	10271652	10690952	6	gain	AAAABB	2.65764	germline	1	9.2514543949728e-13	3.44169137633799e-15
21	10690952	10693348	53	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBB	83.7466	germline	1	0.0832662788335959	0.270039978707327
21	10693348	10765228	6	gain	AAAABB	0.567664	somatic	0	2.07119662253037e-15	0
21	14526948	14536532	2	neutral	AA	100	somatic	0	0.225821876731584	0.528557620828592
21	15854332	15861520	2	neutral	AA	36.3786	somatic	0	0.296713211417425	0.532092607606384
21	16089140	16096328	2	neutral	AA	100	somatic	0	0.778203277481173	0.841263552376629
21	18156888	18159284	2	neutral	AA	100	somatic	0	0.379924721255335	0.621357093990074
21	18202412	18226372	2	neutral	AA	100	somatic	0	0.321178069695294	0.206930089973835
21	18772660	18779848	2	neutral	AA	100	somatic	0	0.773460451468045	0.982208277759608
21	19465104	19469896	1	loss	A	-1	germline	1	0.0143277691899979	0.0366715508816983
21	19714288	19834088	2	neutral	AA	27.5394	somatic	0	0.0091480920386636	0.116619263335333
21	23272348	23289120	2	neutral	AA	61.9967	somatic	0	0.0600814965974832	0.167101691008062
21	26456632	26466216	2	neutral	AA	100	somatic	0	0.312999628968786	0.541298816466229
21	29207240	29214428	2	neutral	AA	54.5678	somatic	0	0.376112944283842	0.293569659699599
21	30903608	30906004	2	neutral	AA	100	somatic	0	0.218226484752667	0.457111720469276
21	31461876	31464272	2	neutral	AA	100	somatic	0	0.641537281873143	0.815798842536994
21	31941076	31948264	2	neutral	AA	27.2839	somatic	0	0.18154914573382	0.313280897560519
21	32391524	32439444	2	neutral	AA	21.8271	somatic	0	0.179379903218862	0.30707058003388
21	36150848	36153244	2	neutral	AA	100	somatic	0	0.237711526759648	0.479345705462338
21	36301796	36311380	2	neutral	AA	26.2823	somatic	0	0.0958268187834814	0.15127202018447
21	36555772	36565356	2	neutral	AA	54.6578	somatic	0	0.169764165280667	0.367507212234414
21	36929548	36931944	2	neutral	AA	100	somatic	0	0.495871086915008	0.716922880039692
21	39565148	39567544	2	neutral	AA	100	somatic	0	0.674990355277606	0.835292238613197
21	41019520	41065044	2	neutral	AA	18.0216	somatic	0	0.714250427524972	0.627599222220084
21	43262176	43264572	4	gain	AAAB	82.4381	germline	1	0.0832762671557958	0.270057326245566
21	45329924	45928924	2	neutral	AA	6.20209	somatic	0	0.220088248399969	0.014125442476426
21	46247592	46252384	2	neutral	AA	100	somatic	0	0.0798036475942614	0.128553357625696
22	11620600	11630184	3	gain	AAB	7.72486	germline	1	0.0143246135995004	0.0366620512438328
22	12691612	12694008	11	gain	AAAAAAAAAAA	48.6694	germline	1	0.083268628939741	0.270044060407847
22	16261652	16268840	3	gain	-	-1	somatic	0	0.0027076677231887	0.00497160567514021
22	17876556	17878952	3	gain	AAB	8.30002	somatic	0	0.0832833183205208	0.27006957205644
22	18063444	18108968	2	neutral	AA	10.2991	germline	1	0.114367672547378	0.0384275253504384
22	23713212	23737172	2	neutral	AA	100	somatic	0	0.000269486878322958	0.000466682143477115
22	26931040	26940624	2	neutral	AA	36.379	somatic	0	0.341178831127195	0.396371184468581
22	29118588	29120984	3	gain	AAB	100	germline	1	0.0832844935616601	0.270071613064325
22	32144736	32147132	1	loss	A	-1	somatic	0	0.0832874317232826	0.270076715633311
22	35602164	35954376	2	neutral	AA	20.5918	somatic	0	0.309402513101744	0.46095187267752
22	36745056	36747452	2	neutral	AA	100	somatic	0	0.126530007014806	0.33857662524699
22	36749848	36752244	0	loss	-	-1	germline	1	0.0832668663550949	0.270040999128249
22	38860724	38867912	2	neutral	AA	36.6873	somatic	0	0.118181373945534	0.283789231890462
22	39536396	39589108	2	neutral	AA	11.4054	somatic	0	0.267029623183326	0.549592440288639
22	44167864	44258912	2	neutral	AA	10.2021	somatic	0	0.58539429769637	0.844068353988393
22	46070288	46072684	1	loss	A	-1	somatic	0	0.0833097644956968	0.270115497457185
22	49755336	49767316	2	neutral	AA	54.5678	somatic	0	0.807289411120467	0.730363427090557
22	49980560	50016500	2	neutral	AA	36.3789	germline	1	0.347284078777957	0.349140509461985
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X	48938300	49776900	2	neutral	AA	1.98208	germline	1	0.0177086023592041	0.0203905060538742
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X	58488756	58498340	1	loss	A	-1	germline	1	0.00271356616129657	0.00497973701942001
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X	126777152	126779548	0	loss	-	-1	germline	1	0.0832651038006722	0.270037937873968
X	138040748	138287536	2	neutral	AA	80.696	somatic	0	0.284070113161531	0.496643121055817
X	141337644	141356812	2	neutral	AA	100	somatic	0	0.256030833346642	0.453989635675474
X	141788092	141792884	1	loss	A	-1	somatic	0	0.0143981864722608	0.0369007510743179
X	151125304	151127700	1	loss	A	-1	germline	1	0.083270979099617	0.270048142153417
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