chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	1166910	1720290	2	neutral	AA	73.6568	somatic	0	0.634707443361524	0.747231336099089
1	11902482	11984286	2	neutral	AA	73.1256	somatic	0	7.53386370363237e-07	3.00388542873176e-06
1	16613430	16635084	6	gain	AAAABB	20.7423	germline	1	0.000532386056121458	0.000671232316246662
1	16721700	16724106	4	gain	AAAB	17.6528	germline	1	0.0832880351590149	0.270077763054432
1	20467842	20518368	2	neutral	AA	36.3786	somatic	0	0.0295190951641117	0.0591886645496463
1	46132644	46187982	2	neutral	AA	27.2876	somatic	0	0.00517459081867464	0.000476753283385145
1	54815898	54844770	2	neutral	AA	37.5957	somatic	0	0.531561689684389	0.926801739328101
1	55662810	55667622	0	loss	-	-1	germline	1	0.0143157136006185	0.0366539655964917
1	75567648	75582084	2	neutral	AA	100	somatic	0	0.204390917948943	0.215435178672594
1	76272606	76287042	2	neutral	AA	54.6042	germline	1	0.537459359821283	0.768137307544231
1	88937790	88985910	2	neutral	AA	9.92144	germline	1	0.568175865176741	0.457187971135152
1	94211742	94384974	2	neutral	AA	100	somatic	0	0.222476489093637	0.2486340202562
1	94767528	94820460	2	neutral	AA	45.7515	somatic	0	0.811209850359826	0.857870106384392
1	104964156	105079644	2	neutral	AA	23.8462	somatic	0	0.51783110738338	0.447522168823208
1	125080722	125083128	10	gain	-	-1	germline	1	0.0832739232564029	0.270053254953251
1	125083128	125085534	5	gain	-	-1	germline	1	0.083281566963201	0.2700665299732
1	125085534	125087940	1	loss	A	-1	somatic	0	0.124053714278672	0.334947421246342
1	125150496	125157714	4	gain	-	-1	somatic	0	0.00270274638293792	0.00496332018143231
1	125162526	125164932	6	gain	-	-1	germline	1	0.083281566963201	0.2700665299732
1	143544366	143736846	1	loss	A	-1	germline	1	1.94795202735514e-35	0
1	152583708	152614986	1	loss	A	-1	germline	1	3.42744437241248e-09	1.23455357048385e-10
1	153002352	153137088	2	neutral	AA	100	germline	1	0.0486570466488382	0.0539128789325169
1	153447462	153500394	2	neutral	AA	22.4357	somatic	0	0.433527788192144	0.651026404033146
1	157229694	157239318	2	neutral	AA	100	somatic	0	0.32514268333719	0.403519415112005
1	177370320	177396786	2	neutral	AA	36.3786	somatic	0	0.0372512443026457	0.0734812290920798
1	187302288	187376874	2	neutral	AA	54.568	somatic	0	0.711494506476601	0.512622743529831
1	187809954	187879728	2	neutral	AA	33.3778	somatic	0	0.197048900949012	0.308557780174666
1	189737160	189754002	2	neutral	AA	54.5678	somatic	0	0.571499398318616	0.63311211683816
1	196485990	196519674	2	neutral	AA	36.4304	somatic	0	0.672992442310832	0.692517300086555
1	199914540	199977096	2	neutral	AA	63.5407	germline	1	5.53796670003063e-05	0.000199709915795654
1	200910624	200944308	2	neutral	AA	56.1616	somatic	0	0.0207089776128763	0.0320752045787496
1	202938882	202967754	2	neutral	AA	27.284	somatic	0	0.957158782443048	0.73661899088182
1	209764704	209808012	2	neutral	AA	30.2963	somatic	0	0.139412734771202	0.198305837845908
1	221075310	221111400	2	neutral	AA	54.5874	somatic	0	0.402222737563795	0.574388105135314
1	224013036	224015442	7	gain	AAAAAAA	1.26095	germline	1	0.0832798029804198	0.270063466464781
1	234640338	234731766	2	neutral	AA	27.3314	somatic	0	0.00339204198705112	0.0634067526856267
1	234775074	234777480	4	gain	AAAB	100	germline	1	0.0832886231969944	0.270078784260546
1	234777480	234782292	6	gain	AAAABB	3.83731	germline	1	0.0143110735891773	0.0366388752110796
1	237055962	237072804	2	neutral	AA	83.8907	somatic	0	0.336655604174703	0.230563967426853
1	245099220	245120874	2	neutral	AA	100	somatic	0	0.519139485988341	0.438246299718704
2	3178326	3183138	4	gain	-	-1	germline	1	0.0143124654532925	0.0366425075847741
2	13059768	13139166	3	gain	-	-1	germline	1	2.56962472976217e-23	0
2	16129824	16149072	1	loss	A	-1	somatic	0	0.0411279210254602	0.0485187451680723
2	23220306	23256396	2	neutral	AA	76.5419	somatic	0	0.029707648764733	0.0319477254964354
2	25756230	25773072	2	neutral	AA	51.2686	somatic	0	0.00978836240460574	0.0119146271157612
2	26040138	26095476	2	neutral	AA	36.5474	germline	1	0.00121611959887574	0.00116304477196216
2	26504496	26516526	2	neutral	AA	54.574	somatic	0	0.00748449842323948	0.00947788460279864
2	30245826	30253044	2	neutral	AA	33.6016	somatic	0	0.373586482229949	0.329317203849592
2	32914080	32916486	4	gain	AAAB	100	germline	1	0.0832827429685365	0.270068572326239
2	33837984	33987156	2	neutral	AA	34.2119	somatic	0	0.0103548922371899	0.00764220581539776
2	34215726	34225350	2	neutral	AA	100	somatic	0	0.19553458119431	0.280062265734244
2	35750754	35767596	1	loss	A	-1	germline	1	1.35484742275967e-05	6.94460537531416e-06
2	52522980	52559070	1	loss	A	-1	germline	1	1.13570381490618e-09	3.87428977788318e-11
2	55378902	55390932	2	neutral	AA	54.5678	somatic	0	0.00275868769674559	0.00302737019101784
2	55665216	55670028	2	neutral	AA	100	somatic	0	0.276836105563662	0.328428958022074
2	56483256	56584308	2	neutral	AA	100	somatic	0	0.0039461587195756	0.00915057690655097
2	60648042	60674508	2	neutral	AA	100	somatic	0	0.0353525658002617	0.0484543956309477
2	65089518	65120796	2	neutral	AA	29.45	somatic	0	4.39310831042483e-05	0.000268523115215524
2	65385456	65390268	2	neutral	AA	100	germline	1	0.321942624974527	0.33049754024933
2	80622654	80680398	2	neutral	AA	18.7002	somatic	0	0.101846866313562	0.13397089829673
2	89772672	89789514	5	gain	-	-1	germline	1	2.2115599082784e-05	1.22988311010985e-05
2	89789514	89796732	3	gain	AAA	72.2742	germline	1	0.00517007284193485	0.0157895372884979
2	89796732	89806356	4	gain	AABB	7.07185	germline	1	0.000532438341254933	0.000671293744151535
2	89806356	89825604	4	gain	AAAA	1.7433	germline	1	4.60077896147474e-06	1.66694589431859e-06
2	89825604	89842446	24	gain	AAAAAAAAAAAAAAAABBBBBBBB	8.41044	germline	1	4.59391692813038e-06	1.66356799258249e-06
2	89842446	89852070	4	gain	AABB	10.0138	germline	1	0.000532484094671682	0.000671344938098062
2	91411158	91415970	4	gain	-	-1	germline	1	0.014311537530615	0.0366397134231993
2	103494090	103619202	2	neutral	AA	55.5789	somatic	0	0.744703669688521	0.234994517125966
2	109068792	109174656	2	neutral	AA	100	somatic	0	0.922742309602351	0.655878491278013
2	121803750	121830216	2	neutral	AA	100	germline	1	0.442632436151287	0.252843820532201
2	123651558	123673212	2	neutral	AA	100	somatic	0	0.00551858062914438	0.00717548031742643
2	146051418	146265552	2	neutral	AA	38.523	somatic	0	0.248255874053621	0.413434346237848
2	164996262	165008292	1	loss	A	-1	germline	1	0.000274836735729081	0.000246583668947808
2	165289794	165395658	2	neutral	AA	100	somatic	0	0.00699419546524162	0.00428591711567483
2	169464204	169469016	1	loss	A	-1	germline	1	0.0161397137857029	0.0421765391698625
2	179203692	179213316	1	loss	A	-1	germline	1	0.00104430439243419	0.00138006089960574
2	194902842	194960586	2	neutral	AA	37.7415	somatic	0	0.506032971922238	0.295235213090503
2	196618320	196639974	2	neutral	AA	100	somatic	0	0.876777717276147	0.412101034538868
2	201425508	201461598	2	neutral	AA	100	somatic	0	0.439476534978879	0.170846981837969
2	207486222	207495846	1	loss	A	-1	somatic	0	0.00145114636061353	0.00161254535098743
2	222494850	222504474	2	neutral	AA	100	somatic	0	0.913887076256875	0.914541505453784
2	229354356	229390446	2	neutral	AA	100	germline	1	0.119237887505151	0.0854809434537624
2	238242120	238304676	2	neutral	AA	23.7918	germline	1	0.0562864104340454	0.167083342091335
3	11315418	11361132	2	neutral	AA	100	somatic	0	0.147880518162052	0.18831741896344
3	28768542	28775760	1	loss	A	-1	germline	1	0.00518941277094126	0.00850300223012734
3	32059950	32067168	1	loss	A	-1	germline	1	0.0143316853760488	0.0367006684286768
3	47179254	47234592	2	neutral	AA	43.424	somatic	0	2.30897088410253e-08	7.79842901366123e-09
3	47448726	47453538	1	loss	A	-1	germline	1	0.0208373966948494	0.0568589260621001
3	49741644	49760892	2	neutral	AA	100	somatic	0	0.0334321135827758	0.0791250055225459
3	51870954	51916668	2	neutral	AA	100	somatic	0	0.666190516454185	0.584779574999398
3	68691300	68698518	1	loss	A	-1	germline	1	0.00604888223793603	0.00946261792418113
3	74862690	75146598	2	neutral	AA	4.76302	somatic	0	0.00105236174255027	0.000529603079193808
3	75724038	75856368	2	neutral	AA	1.0283	germline	1	0.00348225101856403	0.00839919843268355
3	80011530	80016342	1	loss	A	-1	germline	1	0.0158104054215995	0.0409369254648401
3	90366954	90646050	2	neutral	AA	2.9554	somatic	0	1.27645011798649e-06	3.69868212390934e-07
3	90648456	90658080	3	gain	-	-1	somatic	0	0.000533717547341332	0.000672728558961611
3	90670110	90713418	1	loss	A	-1	germline	1	1.16841416507848e-11	2.21267448807794e-13
3	94579860	94642416	2	neutral	AA	33.3923	germline	1	0.253114689844552	0.429371669151204
3	95741958	95749176	1	loss	A	-1	germline	1	0.0421122643393283	0.12734917365042
3	112218246	112295238	2	neutral	AA	54.6522	germline	1	0.054653403914181	0.102658642132982
3	128684910	128694534	3	gain	AAB	9.70383	germline	1	0.000533638945876317	0.000672297812923994
3	132269850	132274662	1	loss	A	-1	somatic	0	0.0246669744958873	0.0531662552966846
3	135383214	135395244	2	neutral	AA	100	somatic	0	0.174977342404989	0.499225363303672
3	145346460	145368114	2	neutral	AA	100	germline	1	0.204189541533036	0.780745380216511
3	148953054	148981926	2	neutral	AA	100	germline	1	0.000446554947529066	0.00139375068121073
3	148981926	149109444	2	neutral	AA	54.5678	germline	1	0.191386115700721	0.0949451902265706
3	151378302	151436046	2	neutral	AA	54.5678	germline	1	0.905079191492533	0.388250144147372
3	157268190	157277814	2	neutral	AA	54.5679	somatic	0	0.528138565457214	0.765198938327015
3	193156086	193168116	1	loss	A	-1	germline	1	0.000363898626381618	0.000280981711023309
3	196404186	196490802	2	neutral	AA	52.9977	somatic	0	1.43443582141568e-10	8.1185891342983e-10
3	197708238	197749140	2	neutral	AA	54.5678	germline	1	0.0905672044094926	0.349620040041385
4	820446	943152	2	neutral	AA	15.1013	somatic	0	0.00217677007455147	0.00742845385282609
4	10208658	10232718	1	loss	A	-1	germline	1	5.00487986030812e-07	3.83601723719096e-08
4	10391514	10401138	1	loss	A	-1	germline	1	0.00139822988342256	0.00156410411495134
4	13076610	13117512	2	neutral	AA	54.6058	somatic	0	0.453863285492316	0.354619810972314
4	21319566	21521670	2	neutral	AA	16.1865	somatic	0	0.958314627440349	0.367590347420133
4	24570072	24608568	2	neutral	AA	58.553	somatic	0	0.310261484457515	0.290357098521145
4	31814538	31819350	0	loss	-	-1	germline	1	0.01430745530126	0.0366349637763559
4	32885208	33135432	2	neutral	AA	34.1796	somatic	0	0.398946374380947	0.477146797143299
4	38613894	38825622	2	neutral	AA	8.75328	somatic	0	0.533383012682046	0.202316861816735
4	40293282	40295688	6	gain	AAAABB	10.3586	germline	1	0.0832809789655777	0.270065508800909
4	43315218	43368150	2	neutral	AA	42.9365	somatic	0	0.383817530916542	0.330058242343147
4	44679420	44756412	2	neutral	AA	100	somatic	0	0.0318242107145372	0.071632949351092
4	51815616	51818022	2	neutral	AA	13.642	somatic	0	0.162693597828407	0.388594159282586
4	56841750	57024606	2	neutral	AA	100	somatic	0	6.3722489314809e-12	3.51729756431496e-12
4	59459478	59464290	3	gain	AAB	7.03806	somatic	0	0.014319983583152	0.0366559221556514
4	60128346	60150000	2	neutral	AA	89.3981	somatic	0	0.232092339973302	0.247089178459505
4	61463676	61492548	2	neutral	AA	27.8787	somatic	0	0.883998424808337	0.77884033262456
4	63828774	63850428	1	loss	A	-1	germline	1	1.00614119763302e-05	6.12687779055765e-06
4	67117776	67134618	2	neutral	AA	100	somatic	0	0.830284211404462	0.428807290514961
4	68518068	68621526	1	loss	A	-1	germline	1	5.97275364571881e-18	0
4	70618506	70623318	1	loss	A	-1	germline	1	0.0207073325317194	0.0564486882160581
4	70671438	70681062	2	neutral	AA	54.5964	somatic	0	0.019745928102868	0.0273912002713994
4	72074136	72081354	2	neutral	AA	100	somatic	0	0.308819952947584	0.602636468511919
4	74559534	74564346	1	loss	A	-1	germline	1	0.0206435259059939	0.0545178597557118
4	81609114	81625956	2	neutral	AA	100	somatic	0	0.982950761056391	0.998948754835802
4	82107156	82123998	2	neutral	AA	100	somatic	0	0.399941556279054	0.414507442383057
4	87852684	87929676	2	neutral	AA	27.2901	somatic	0	0.240734118234817	0.178790023848004
4	106135878	106143096	1	loss	A	-1	germline	1	0.00536903902731686	0.00958634917507339
4	122867202	122939382	2	neutral	AA	54.5678	somatic	0	0.279916167750511	0.102091506617791
4	134509836	134514648	1	loss	A	-1	germline	1	0.0223190471268265	0.0615813217770635
4	137168466	137180496	1	loss	A	-1	germline	1	0.000396440051996938	0.00027515160713798
4	140541678	140551302	2	neutral	AA	100	somatic	0	0.256903306136751	0.471887135713345
4	162347256	162361692	2	neutral	AA	18.357	somatic	0	0.951315800925765	0.999978534689486
4	164736414	164750850	2	neutral	AA	100	somatic	0	0.199771811782924	0.377684909657584
4	164753256	164770098	2	neutral	AA	54.5678	somatic	0	0.0158693942438726	0.141586239619111
4	165080472	165085284	1	loss	A	-1	germline	1	0.0148543148547584	0.0382672847684766
4	165412500	165443778	2	neutral	AA	100	somatic	0	0.231523211281438	0.35372276866754
4	166276254	166391742	2	neutral	AA	36.278	somatic	0	0.0507950085633693	0.012852618803543
4	169851570	170058486	2	neutral	AA	24.0772	somatic	0	0.973647475041569	0.798115600257183
4	171451560	171458778	1	loss	A	-1	germline	1	0.0203535833895133	0.0553218424613265
4	176340552	176398296	2	neutral	AA	36.52	somatic	0	0.0748113327260324	0.0809452322476159
4	183936294	183960354	2	neutral	AA	36.3786	somatic	0	0.621355742355981	0.474346861618138
4	185519442	185524254	1	loss	A	-1	germline	1	0.0189115148918713	0.0499585073590222
4	186532368	186541992	2	neutral	AA	36.541	somatic	0	0.945108016917523	0.862204930015683
4	187882134	187894164	2	neutral	AA	38.7334	somatic	0	0.201023921554074	0.139619752205911
4	189183780	189270396	2	neutral	AA	10.2026	somatic	0	0.962822045468431	0.887394651698471
4	189275208	189280020	1	loss	A	-1	germline	1	0.0197236979467257	0.0533421766653202
5	413832	416238	4	gain	-	-1	germline	1	0.0832827429685365	0.270068572326239
5	757890	765108	3	gain	-	-1	germline	1	0.00270355845500089	0.00496309310211673
5	4188846	4191252	1	loss	A	-1	somatic	0	0.0834616522580951	0.270379141090674
5	45001824	45013854	1	loss	A	-1	germline	1	0.000658128701312591	0.00117019174777999
5	113815830	113835078	1	loss	A	-1	germline	1	0.000528965559307721	0.00132614347182669
5	141174456	141176862	4	gain	AAAB	26.4615	somatic	0	0.0832850950195633	0.27007265706614
5	141508890	141715806	2	neutral	AA	36.3786	somatic	0	0.210088152392642	0.13038185480713
5	142298058	142326930	2	neutral	AA	100	somatic	0	0.183923372163109	0.334051085487061
5	144299850	144314286	2	neutral	AA	36.3786	somatic	0	0.526532888627563	0.204610709905386
5	145404204	145406610	2	neutral	AA	100	somatic	0	0.946286905271017	0.950137208129066
5	147564792	147567198	2	neutral	AA	100	somatic	0	0.995939801494809	0.963007976662067
5	148753356	148765386	2	neutral	AA	100	somatic	0	0.249402663285552	0.188732670348141
5	150824922	150844170	1	loss	A	-1	germline	1	5.04647725803818e-06	1.24197467998854e-06
5	153274230	153276636	2	neutral	AA	54.5678	somatic	0	0.755036253889143	0.877215096060422
5	153541296	153577386	2	neutral	AA	100	germline	1	0.0439964478715903	0.0764892454920363
5	154869408	154871814	2	neutral	AA	100	somatic	0	0.296649100991347	0.542087889681735
5	157431798	157434204	2	neutral	AA	100	somatic	0	0.627865497593888	0.807445431672644
5	158307582	158317206	2	neutral	AA	54.5686	somatic	0	0.12858639400921	0.246467507781622
5	160906062	160908468	2	neutral	AA	100	somatic	0	0.145159580469629	0.364999556894235
5	161642298	161644704	2	neutral	AA	100	somatic	0	0.106118779693028	0.307722325525175
5	167515344	167556246	2	neutral	AA	51.0184	somatic	0	0.00129521861077248	0.0150583040627288
5	167914740	167919552	2	neutral	AA	54.5678	somatic	0	0.969596321108764	0.956984819651388
5	169500294	169632624	2	neutral	AA	100	somatic	0	0.595365089395914	0.147987401920229
5	172086744	172089150	2	neutral	AA	100	somatic	0	0.599672253854347	0.789714103887804
5	172765236	172767642	2	neutral	AA	100	somatic	0	0.957551133471536	0.953262966800231
5	173886432	173893650	2	neutral	AA	100	somatic	0	0.237115313447592	0.369828565771301
5	174117408	174122220	2	neutral	AA	19.2807	somatic	0	0.943952586776933	0.738018704332339
5	175204920	175233792	2	neutral	AA	40.4105	germline	1	0.194924861401394	0.285116698270802
5	176150478	176155290	2	neutral	AA	100	somatic	0	0.576382499714281	0.791794631163902
5	176521002	176528220	2	neutral	AA	100	somatic	0	0.0867365131729291	0.162826858046381
5	178125804	178133022	2	neutral	AA	54.5678	somatic	0	0.0240782517286869	0.0335465864120551
5	178585350	178587756	7	gain	AAAAABB	22.8781	germline	1	0.0832798029804198	0.270063466464781
5	179408202	179410608	2	neutral	AA	100	somatic	0	0.457461537341465	0.687051889887992
5	179410608	179415420	1	loss	A	-1	somatic	0	0.0593633269809146	0.147071807470553
5	179417826	179420232	2	neutral	AA	100	somatic	0	0.35833717709358	0.601721099892869
5	180351354	180360978	2	neutral	AA	36.8954	somatic	0	0.71740328351302	0.9726696074805
5	180733908	180741126	2	neutral	AA	100	somatic	0	0.834084059551834	0.98562070474333
5	180950448	181003380	1	loss	A	-1	germline	1	3.29673141136789e-14	0
6	255036	257442	2	neutral	AA	17.0785	germline	1	0.254362604540774	0.497744513057236
6	257442	382554	3	gain	AAB	0.420947	germline	1	8.090876545664e-34	0
6	382554	442704	2	neutral	AA	54.9025	somatic	0	0.0136649392516298	0.0339677592506568
6	666462	668868	1	loss	A	-1	somatic	0	0.0844827474642775	0.272146349142142
6	7047174	7066422	2	neutral	AA	100	somatic	0	0.368210612195238	0.775938219172503
6	17963196	18025752	2	neutral	AA	36.3786	somatic	0	0.000108700253926971	0.00118120128499333
6	27341784	27541482	2	neutral	AA	28.4464	somatic	0	0.948223255834778	0.727699846452241
6	32488218	32562804	0	loss	-	-1	germline	1	4.24409390096282e-10	1.02529096324133e-11
6	32562804	32666262	1	loss	A	-1	somatic	0	1.26086784574484e-06	1.10596056757117e-08
6	34210914	34278282	2	neutral	AA	21.8271	somatic	0	2.74945019451432e-05	0.000400843368155268
6	47099856	47143164	2	neutral	AA	21.9896	somatic	0	0.989373945851578	0.865464144294942
6	47338050	47412636	2	neutral	AA	100	somatic	0	0.589552439422325	0.369989454824446
6	60236616	60241428	4	gain	-	-1	germline	1	0.014314414263666	0.0366453019327815
6	65344554	65358990	2	neutral	AA	100	somatic	0	0.0566638894577637	0.109242004087115
6	78007332	78014550	2	neutral	AA	100	germline	1	0.680653215462186	0.911229918543569
6	78257556	78327330	1	loss	A	-1	germline	1	3.2859655948614e-18	0
6	90994920	91055070	2	neutral	AA	100	somatic	0	0.0225460651016708	0.0234175370228732
6	116368596	116496114	2	neutral	AA	9.92579	somatic	0	0.109633085082004	0.210665448020464
6	135306222	135339906	2	neutral	AA	54.5678	somatic	0	0.194437588093214	0.454342227357573
6	153420996	153574980	2	neutral	AA	0.476301	somatic	0	0.434235437964635	0.387538167269546
6	156717216	156746088	2	neutral	AA	27.663	somatic	0	0.11740028885005	0.410623533727726
6	157309092	157311498	10	gain	AAAAAAABBB	19.4148	germline	1	0.0832715714609547	0.270049170427557
6	157313904	157316310	4	gain	AAAB	35.7968	germline	1	0.0832827429685365	0.270068572326239
6	159260358	159294042	2	neutral	AA	25.4749	somatic	0	0.820578307441015	0.935115324584176
6	165311448	165318666	1	loss	A	-1	germline	1	0.00548668946686674	0.00894077572023044
6	165941820	166139112	2	neutral	AA	27.7893	somatic	0	0.00119787339668584	0.0123886891392436
7	904656	907062	5	gain	AAAAA	10.0626	germline	1	0.0832821549641874	0.270067551148311
7	16132230	16134636	0	loss	-	-1	germline	1	0.0832674559483847	0.270042022616105
7	18215826	18244698	2	neutral	AA	100	somatic	0	0.377172356923778	0.558934414099364
7	19474164	19553562	2	neutral	AA	12.0775	somatic	0	0.000335059842418528	0.0034262988811099
7	31790478	31848222	2	neutral	AA	54.5678	somatic	0	0.000432000766222691	0.00663732539929895
7	54741312	54832740	2	neutral	AA	36.3845	germline	1	0.34615939013297	0.0818481029965319
7	57409566	57931668	2	neutral	AA	0.560568	somatic	0	0.891326345637354	0.867705351034512
7	57931668	57936480	4	gain	AAAA	2.92463	germline	1	0.0143134862295354	0.0366425075847741
7	57936480	58032720	2	neutral	AA	1.75688	germline	1	0.26024291860129	0.255875844378259
7	58032720	61045032	2	neutral	AA	8.75906	somatic	0	2.49254978388723e-15	5.52780043960865e-13
7	61045032	61057062	3	gain	-	-1	germline	1	0.000107768237133705	9.11249986482732e-05
7	61057062	61964124	2	neutral	AA	1.57443	germline	1	0.967983036382132	0.519449805443414
7	62296152	62358708	3	gain	AAB	0.364788	germline	1	1.13739911058942e-11	4.39507319427435e-11
7	62402016	62406828	5	gain	-	-1	germline	1	0.0143114447412661	0.0366394340172952
7	62438106	62454948	3	gain	AAB	3.03212	somatic	0	1.7794531906384e-05	8.94709784394765e-05
7	62519910	62748480	2	neutral	AA	3.33788	germline	1	1.05484661862894e-06	2.23526237541627e-06
7	64882602	64928316	2	neutral	AA	46.3339	somatic	0	0.480614046933909	0.405913259045533
7	77242224	77304780	2	neutral	AA	100	somatic	0	0.567045822626	0.465861262729664
7	83428050	83505042	2	neutral	AA	36.3786	somatic	0	0.972958517465718	0.683860753554486
7	89599440	89625906	3	gain	AAB	100	germline	1	4.36034991785667e-08	4.2312009451706e-09
7	96807816	96937740	2	neutral	AA	91.344	somatic	0	0.135191195383059	0.126413102543141
7	100729596	100739220	1	loss	A	-1	germline	1	0.000759823048480666	0.00114161722533601
7	100948542	100955760	3	gain	AAB	0.692657	germline	1	0.0027037615078499	0.00496258220847601
7	100955760	100960572	9	gain	AAAAAABBB	6.65446	germline	1	0.0143092179560928	0.0366383164123208
7	100960572	100975008	3	gain	AAB	1.32749	germline	1	2.21830715655526e-05	1.23931529083521e-05
7	101266134	101400870	2	neutral	AA	2.51735	somatic	0	1.61523832509217e-12	2.00668370808899e-11
7	108823380	108842628	2	neutral	AA	100	somatic	0	0.352251210410319	0.390884118561676
7	114602592	114929808	2	neutral	AA	60.4969	somatic	0	0.000906621911345961	0.0115293199979289
7	120189324	120357744	2	neutral	AA	100	somatic	0	0.990798939056417	0.379737353451613
7	134100816	134112846	1	loss	A	-1	germline	1	0.0001423221507989	0.00013409744047943
7	137897484	137938386	2	neutral	AA	100	germline	1	0.271970064934457	0.0363946624640809
7	143847522	143849928	4	gain	-	-1	germline	1	0.0832850950195633	0.27007265706614
7	152400852	152408070	10	gain	AAAAAAABBB	13.2197	germline	1	0.00270063265782015	0.00495895057707962
7	152412882	152417694	2	neutral	AA	7.12063	germline	1	0.0834289427608	0.184906000127131
7	158593896	158596302	4	gain	AABB	11.3199	germline	1	0.0832827429685365	0.270068572326239
8	6111240	6116052	1	loss	A	-1	germline	1	0.0143526024153979	0.0367527460320839
8	39376596	39528174	1	loss	A	-1	germline	1	1.19399744473607e-35	0
8	43235820	43238226	5	gain	-	-1	germline	1	0.083281566963201	0.2700665299732
8	43238226	43243038	8	gain	-	-1	germline	1	0.0143098674035278	0.0366385958107681
8	50119386	50126604	1	loss	A	-1	germline	1	0.0045385447235349	0.00968676395658663
8	54423720	54483870	2	neutral	AA	36.379	somatic	0	0.958414885342451	0.226457138112781
8	66886800	66937326	2	neutral	AA	100	somatic	0	0.00101358750132378	0.000831280240589094
8	72336390	72454284	2	neutral	AA	100	germline	1	0.0398068265466501	0.0201617073779035
8	88803054	88819896	2	neutral	AA	27.3232	germline	1	0.140274577369658	0.287875774538442
8	93458664	93588588	2	neutral	AA	100	germline	1	0.00148515180814712	0.0142627862981214
8	93607836	93809940	2	neutral	AA	45.503	somatic	0	0.0141111479120402	0.0163072710941569
8	93834000	93908586	2	neutral	AA	36.3786	somatic	0	0.00437617201173429	0.00285652657876723
8	93971142	93975954	2	neutral	AA	100	germline	1	0.522986891119102	0.628616071102101
8	107420682	107492862	2	neutral	AA	48.9	somatic	0	0.0810827012865205	0.1287946680735
8	114621840	114631464	1	loss	A	-1	germline	1	0.00101776079694263	0.00120114473644961
8	116103936	116176116	2	neutral	AA	29.6829	somatic	0	0.000341806828042221	0.0016007795518358
8	124099074	124103886	2	neutral	AA	100	somatic	0	0.719217433755421	0.653012226480797
8	128992878	129021750	2	neutral	AA	81.4619	somatic	0	0.185897696713093	0.334348322749732
8	129589566	129599190	2	neutral	AA	100	germline	1	0.158641273359469	0.245972831295052
8	130323396	130364298	2	neutral	AA	100	somatic	0	0.00147471050492996	0.000779421571904138
8	135130584	135135396	2	neutral	AA	100	somatic	0	0.22836946490282	0.375582317534415
8	138205452	138210264	3	gain	AAB	6.13509	somatic	0	0.0197455346370542	0.0533820701909211
8	141954000	141963624	2	neutral	AA	100	somatic	0	0.506128143736868	0.685482903228498
8	143241210	143270082	2	neutral	AA	50.2797	somatic	0	0.509938061117483	0.710081653446693
8	143618952	143630982	1	loss	A	-1	germline	1	0.000219442578739195	0.000179375878528232
8	144124212	144126618	6	gain	AAAAAB	16.716	germline	1	0.083281566963201	0.2700665299732
9	2831862	2846298	2	neutral	AA	54.5678	somatic	0	0.575648749177456	0.645920691990828
9	4766286	4795158	2	neutral	AA	100	somatic	0	0.0591461596646787	0.0727762717215724
9	5834550	5839362	2	neutral	AA	100	somatic	0	0.786704963919944	0.958806836877777
9	6984618	7011084	2	neutral	AA	73.2358	somatic	0	0.651239143887195	0.888961171680668
9	12010752	12087744	2	neutral	AA	13.1131	somatic	0	0.321132217373755	0.127361605503323
9	20864832	20872050	2	neutral	AA	54.5681	somatic	0	0.492629009284012	0.40457450069755
9	21355656	21367686	2	neutral	AA	27.2842	somatic	0	0.497398996596124	0.434042822406062
9	24413682	24428118	2	neutral	AA	54.5874	somatic	0	0.878908666351393	0.958210778838722
9	33258138	33337536	2	neutral	AA	56.4875	somatic	0	0.588316782143836	0.39680222648523
9	33794676	33816330	2	neutral	AA	1.14255	somatic	0	0.196742874125191	0.197759453811669
9	34408206	34417830	2	neutral	AA	100	somatic	0	0.656856514324907	0.842636718795926
9	40868316	40870722	4	gain	AABB	5.32809	germline	1	0.083289211238337	0.270079805469479
9	40911624	40928466	6	gain	AAAABB	0.965537	somatic	0	0.000532382788459475	0.000671232316246662
9	42386502	42388908	6	gain	AAABBB	68.8194	germline	1	0.0832803909713173	0.270064487631435
9	71010684	71015496	2	neutral	AA	100	somatic	0	0.962229010809572	0.975350332585826
9	71133390	71152638	2	neutral	AA	100	somatic	0	0.431054729087257	0.7042816125136
9	75149004	75228402	2	neutral	AA	100	somatic	0	0.954046769867234	0.155098022962527
9	77155608	77162826	3	gain	AAA	38.4948	germline	1	0.00270599600908643	0.0049646828573352
9	82759182	82768806	1	loss	A	-1	germline	1	0.000923957214336049	0.00115234715790313
9	83738424	84036768	2	neutral	AA	19.9199	somatic	0	2.73668950786992e-11	5.59902235686138e-10
9	86539008	86541414	1	loss	A	-1	somatic	0	0.0834380937927936	0.270338261896166
9	87349830	87364266	3	gain	AAB	4.89544	germline	1	2.2184670918493e-05	1.23309471733446e-05
9	89623500	89674026	2	neutral	AA	100	somatic	0	0.000808643152853403	0.00323143004719006
9	97375632	97380444	2	neutral	AA	100	somatic	0	0.368976557974756	0.79989591671754
9	98893818	98908254	2	neutral	AA	100	somatic	0	0.218916586727944	0.204743586770631
9	103012890	103015296	0	loss	-	-1	germline	1	0.0832709835204995	0.27004814930318
9	104456490	104473332	2	neutral	AA	100	somatic	0	0.0341708771984799	0.0495295590729805
9	108402330	108428796	2	neutral	AA	100	somatic	0	0.0301572724200123	0.115174932482136
9	110262168	110266980	1	loss	A	-1	germline	1	0.0170692635885562	0.0429483993693571
9	110837202	110849232	2	neutral	AA	36.3786	somatic	0	0.337320829945825	0.463687797126679
9	122900886	122944194	2	neutral	AA	36.3786	somatic	0	0.0245910227944046	0.0256681910045322
9	124804032	125032602	2	neutral	AA	54.9194	somatic	0	8.21226368893143e-11	3.75482311909536e-10
9	128973630	128978442	2	neutral	AA	100	germline	1	0.272315474491731	0.639306251122103
9	129062652	129072276	2	neutral	AA	36.3786	somatic	0	0.645913378942349	0.892895199962602
9	129423552	129445206	3	gain	AAB	0.273743	germline	1	8.51008653754685e-07	2.58920927376227e-06
9	130268058	130272870	1	loss	A	-1	germline	1	0.0221602676263958	0.0554966760499772
9	132363684	132486390	2	neutral	AA	100	somatic	0	0.00184272172936562	0.0132971207257536
9	132486390	133482474	2	neutral	AA	32.4882	somatic	0	0.00252184878692062	0.00075474917722651
9	134728782	134760060	2	neutral	AA	100	somatic	0	0.00148517027209368	0.00957964585293181
9	136148322	136162758	2	neutral	AA	27.3732	somatic	0	0.978787510184006	0.991309334528811
9	136165164	136167570	0	loss	-	-1	germline	1	0.083270395583407	0.270047128181621
9	136562154	136600650	2	neutral	AA	24.613	somatic	0	0.00541873183999088	0.0106258483010792
9	136600650	136603056	2	neutral	AA	54.5705	somatic	0	0.566128220595436	0.767417358448732
9	137714628	137726658	2	neutral	AA	9.25433	somatic	0	0.815900113877303	0.877817301504912
10	3544038	3582534	2	neutral	AA	54.5678	somatic	0	0.00810411384197757	0.0213962314866757
10	3888096	3900126	2	neutral	AA	100	somatic	0	0.657881268526841	0.749050583607047
10	7205970	7576494	2	neutral	AA	5.0043	somatic	0	0.47684415775481	0.421820914637733
10	15703962	15744864	2	neutral	AA	93.3619	somatic	0	0.49996921813046	0.34918841910563
10	38483970	38524872	2	neutral	AA	0.396479	somatic	0	4.81404981052094e-11	3.48580497799844e-10
10	38524872	38529684	11	gain	AAAAAAAAAAA	1.04617	germline	1	0.0143092179560928	0.0366394340172952
10	38575398	38582616	3	gain	AAA	31.8262	germline	1	0.00476819389059109	0.013724078928479
10	38582616	38825622	2	neutral	AA	0.49591	somatic	0	6.16854782519557e-07	7.8579044998639e-06
10	41821092	41842746	2	neutral	AA	3.25565	germline	1	0.27434313091077	0.224841951330918
10	41857182	41914926	23	gain	AAAAAAAAAAAAAAABBBBBBBB	43.5661	germline	1	9.63611718559034e-07	2.25152751998081e-07
10	42299886	42321540	2	neutral	AA	1.33664	somatic	0	5.72578595741713e-07	4.57482620452865e-07
10	46086930	46219260	2	neutral	AA	26.5012	somatic	0	0.946599551133688	0.981549499251547
10	46515198	46560912	4	gain	AABB	0.557498	germline	1	9.27035299978524e-13	3.44169137633799e-15
10	48293232	48355788	2	neutral	AA	65.9873	somatic	0	0.248970441301985	0.31792677027156
10	56750322	56767164	1	loss	A	-1	germline	1	2.82646633889146e-05	9.59239336084661e-06
10	65546658	65556282	0	loss	-	-1	germline	1	0.0143130222323731	0.036644743048265
10	69521370	69530994	1	loss	A	-1	germline	1	0.00113080216888657	0.00134637771667045
10	97183152	97197588	2	neutral	AA	36.3839	somatic	0	0.643421636641557	0.816636248334417
10	98564196	98585850	2	neutral	AA	54.5693	somatic	0	0.642714612129483	0.409135804941475
10	99050208	99314868	2	neutral	AA	100	somatic	0	0.0946151805681832	0.0580651125063174
10	106713318	106739784	2	neutral	AA	27.2936	somatic	0	0.0525454881554592	0.0618153591052708
10	114590562	114604998	2	neutral	AA	36.3786	somatic	0	0.804367400509502	0.93250391180573
10	128444310	128463558	2	neutral	AA	100	somatic	0	0.122216130249624	0.0542913507847514
10	128463558	128465964	6	gain	AAAABB	43.8951	germline	1	0.083281566963201	0.2700665299732
10	132248196	132445488	2	neutral	AA	3.64057	somatic	0	0.000625834512826218	0.00627951466692556
10	132811200	133051800	2	neutral	AA	17.9167	somatic	0	6.05824220018423e-12	3.68835817443625e-09
11	4946736	4953954	1	loss	A	-1	germline	1	0.0050085170950283	0.00871175547995917
11	5738310	5740716	0	loss	-	-1	germline	1	0.0832733353024967	0.2700522338176
11	18923190	18942438	3	gain	-	-1	germline	1	9.66409429439851e-07	2.25785477203644e-07
11	28985082	28992300	1	loss	A	-1	germline	1	0.0143207263034818	0.0366685022179455
11	48533832	48541050	3	gain	-	-1	germline	1	0.00270506476191964	0.00496405825498258
11	54755748	54758154	0	loss	-	-1	germline	1	0.0832762751056556	0.270057339524042
11	55116648	55123866	1	loss	A	-1	somatic	0	0.00514987098833573	0.00952599860452097
11	55239354	55311534	2	neutral	AA	5.30975	germline	1	0.880913853539716	0.999122050484126
11	55597848	55684464	1	loss	A	-1	germline	1	7.38402364957421e-21	0
11	61434804	61480518	2	neutral	AA	100	somatic	0	0.0715201816593373	0.0368750688968209
11	63424566	63431784	3	gain	AAB	10.0376	germline	1	0.00270360921690678	0.00496332018143231
11	64175238	64365312	2	neutral	AA	15.9493	somatic	0	0.000194359454846473	0.000641147446066026
11	66942138	66946950	1	loss	A	-1	somatic	0	0.0180600831484788	0.0459556934359081
11	69595956	69617610	2	neutral	AA	100	germline	1	0.0599985320431615	0.127766513318258
11	72473532	72490374	2	neutral	AA	54.5681	somatic	0	0.868204177975939	0.759990770328826
11	73318038	73354128	2	neutral	AA	36.379	somatic	0	0.687053998515801	0.717415665248816
11	77162826	77203728	2	neutral	AA	12.204	somatic	0	0.000463193444021142	0.0039262758420574
11	80884908	80904156	2	neutral	AA	54.5678	somatic	0	0.240974338637228	0.690296563481055
11	81787158	81806406	1	loss	A	-1	germline	1	3.4426616206403e-05	3.73629097515371e-05
11	87754038	87816594	2	neutral	AA	54.8553	somatic	0	0.266142388320137	0.387212121374405
11	94895046	94919106	2	neutral	AA	100	somatic	0	0.815424176350824	0.592862553670962
11	121897584	121914426	2	neutral	AA	100	somatic	0	0.272876882905615	0.566774699791442
11	122248860	122289762	2	neutral	AA	48.113	germline	1	0.284262258361471	0.286844286157017
11	123740580	123798324	2	neutral	AA	27.676	somatic	0	0.254837500196049	0.294536279922302
11	125518614	125535456	3	gain	AAB	11.0463	germline	1	5.33745667759626e-06	2.38950728026488e-06
11	130063548	130077984	2	neutral	AA	21.8277	somatic	0	0.476325707935523	0.613749802305535
12	757890	767514	1	loss	A	-1	germline	1	0.000887960934046963	0.00161921883381888
12	2254422	2256828	7	gain	-	-1	germline	1	0.0832803909713173	0.270064487631435
12	29100570	29134254	3	gain	-	-1	germline	1	9.1964749326146e-11	1.39754874339815e-12
12	33234078	33241296	1	loss	A	-1	germline	1	0.00480983204656329	0.00838534617486097
12	37644276	37754952	2	neutral	AA	0.623479	germline	1	0.00908664287251584	0.0032315365440565
12	45442122	45507084	2	neutral	AA	100	somatic	0	0.51897821058807	0.968001537008277
12	45514302	45516708	0	loss	-	-1	germline	1	0.0832897992830427	0.270080826681231
12	48314886	48317292	0	loss	-	-1	germline	1	0.0832680438686638	0.270043043723571
12	51685692	51697722	2	neutral	AA	100	somatic	0	0.30456286957605	0.5681019339512
12	58145802	58150614	2	neutral	AA	13.7002	somatic	0	0.815712209734103	0.935828677972368
12	59541282	59553312	1	loss	A	-1	germline	1	0.000417327825689704	0.000267415898188572
12	64786362	64791174	2	neutral	AA	100	somatic	0	0.0839229013214595	0.177341747405736
12	70772490	70784520	2	neutral	AA	100	somatic	0	0.550981673887487	0.871656917747502
12	72988416	73229016	2	neutral	AA	13.568	somatic	0	0.510960651771911	0.440798254064782
12	79761306	79768524	3	gain	AAB	19.1614	germline	1	0.00270460771139196	0.00496473964293931
12	85913448	86202168	2	neutral	AA	100	somatic	0	0.0149919492774177	0.0049500676228893
12	90090264	90097482	1	loss	A	-1	germline	1	0.00418281439842752	0.00954762317250868
12	92529948	92549196	2	neutral	AA	5.45743	somatic	0	0.645981355942938	0.935619706014852
12	95371434	95390682	2	neutral	AA	36.976	somatic	0	0.496030101226811	0.87940169028217
12	126223572	126461766	2	neutral	AA	100	somatic	0	0.111264368987458	0.244545132772161
13	18232668	18237480	1	loss	A	-1	germline	1	0.0235734588975054	0.0493658864750922
13	22019712	22024524	0	loss	-	-1	germline	1	0.0151166622912892	0.0390818809093945
13	23059104	23063916	1	loss	A	-1	germline	1	0.0205740852577986	0.0559634759884731
13	29179968	29232900	2	neutral	AA	54.5678	somatic	0	0.163997278908905	0.0823430015884535
13	38481564	38486376	1	loss	A	-1	germline	1	0.0200084790574192	0.0542383614674958
13	55756644	55840854	2	neutral	AA	59.9876	somatic	0	0.350530448291645	0.183976243367719
13	63027576	63063666	3	gain	AAB	0.336186	germline	1	6.45366296125784e-08	4.18823282721803e-08
13	63063666	63068478	5	gain	AAABB	0.572647	germline	1	0.0143114447412661	0.0366394340172952
13	73416684	73476834	2	neutral	AA	100	somatic	0	0.235783962159957	0.771086374073347
13	80504760	80536038	2	neutral	AA	54.5681	somatic	0	0.953315890470987	0.561086472191008
13	81231372	81238590	1	loss	A	-1	germline	1	0.00361155479326591	0.00735106501373628
13	84705636	84708042	1	loss	A	-1	somatic	0	0.0834651864924982	0.270385273358871
13	90210564	90212970	0	loss	-	-1	germline	1	0.0832739232564029	0.270053254953252
13	98600286	98607504	1	loss	A	-1	germline	1	0.00577281568402173	0.0101123489218277
13	101242074	101244480	0	loss	-	-1	somatic	0	0.0832721594047726	0.270050191554753
13	109783374	109788186	1	loss	A	-1	somatic	0	0.0257736602316091	0.0566946877076754
14	16093734	16096140	4	gain	-	-1	germline	1	0.0832880351590149	0.270077763054432
14	22339710	22399860	2	neutral	AA	100	somatic	0	6.98986231406439e-11	2.33453256726079e-11
14	25308714	25356834	2	neutral	AA	100	somatic	0	0.0297693725724107	0.0595262975801212
14	26964042	26978478	2	neutral	AA	100	somatic	0	0.0794041624890188	0.245110162257468
14	27105996	27185394	2	neutral	AA	43.7854	somatic	0	0.00483908115268945	0.0141285065011004
14	27534264	27541482	2	neutral	AA	65.1446	somatic	0	0.18025386123038	0.46021456055254
14	31744764	31747170	2	neutral	AA	100	somatic	0	0.170745151456138	0.399092004331545
14	32764908	32779344	2	neutral	AA	100	somatic	0	0.610098243517326	0.762992985059753
14	34348056	34350462	0	loss	-	-1	germline	1	0.0832733353024967	0.2700522338176
14	35137224	35146848	1	loss	A	-1	germline	1	0.00119882190594872	0.00159821597142495
14	35707446	35757972	2	neutral	AA	54.6208	somatic	0	0.00429024872540227	0.000502091277357009
14	35856618	35907144	2	neutral	AA	18.1912	somatic	0	0.00685690555802209	0.0111925726789767
14	37300218	37302624	0	loss	-	-1	germline	1	0.0832856830407275	0.270073678258162
14	41140194	41200344	1	loss	A	-1	germline	1	1.0626272729524e-14	0
14	43060182	43144392	2	neutral	AA	36.3819	somatic	0	0.442971547157617	0.0838449240684819
14	43719426	43916718	2	neutral	AA	54.5678	somatic	0	0.0359316434499821	0.0374989671659769
14	44874306	44879118	2	neutral	AA	100	somatic	0	0.884902385855173	0.94071293582195
14	44879118	44881524	1	loss	A	-1	somatic	0	0.124620738671927	0.335780930167359
14	46414146	46416552	2	neutral	AA	100	somatic	0	0.167572170725987	0.394998145100437
14	49900440	49905252	2	neutral	AA	100	somatic	0	0.0834766286138081	0.122396555633228
14	50886900	50922990	2	neutral	AA	54.5678	somatic	0	0.692274839438728	0.526251550009939
14	52845384	52879068	2	neutral	AA	42.5758	somatic	0	0.185860115725655	0.436550039219689
14	53025834	53035458	2	neutral	AA	100	somatic	0	0.450891041930292	0.412048818519153
14	53076360	53078766	2	neutral	AA	100	somatic	0	0.759129092752304	0.879163237990335
14	53143728	53150946	2	neutral	AA	62.1483	germline	1	0.921796160655349	0.97134178385176
14	54079662	54082068	2	neutral	AA	100	somatic	0	0.107619577592369	0.31006462222006
14	55109430	55123866	2	neutral	AA	37.5523	somatic	0	0.400826506747599	0.505525757240306
14	60166842	60169248	2	neutral	AA	100	somatic	0	0.374113231316203	0.616187570784028
14	65601996	65611620	1	loss	A	-1	germline	1	0.000862803930229373	0.00107334275466164
14	67740930	67745742	2	neutral	AA	100	somatic	0	0.545273713828681	0.752543426375719
14	71087676	71123766	2	neutral	AA	100	somatic	0	0.395949977871415	0.916288568344235
14	72798342	72805560	2	neutral	AA	14.3489	somatic	0	0.691874177164099	0.66919917075269
14	73873824	73878636	2	neutral	AA	54.5722	somatic	0	0.155462564236296	0.222985997043717
14	75512310	75519528	2	neutral	AA	54.5678	somatic	0	0.938094758542265	0.98048013752333
14	76631100	76703280	2	neutral	AA	44.7164	germline	1	0.0188281381545384	0.0721355268352232
14	79585668	79588074	2	neutral	AA	100	somatic	0	0.236379487184671	0.477871796439386
14	79638600	79648224	1	loss	A	-1	germline	1	0.00150701276757401	0.00167250576447109
14	79857546	79896042	2	neutral	AA	35.7786	somatic	0	0.476940030297145	0.915908781457462
14	80562504	80663556	2	neutral	AA	54.568	somatic	0	0.407391273702624	0.601001021938302
14	80928216	81000396	2	neutral	AA	36.7399	somatic	0	0.768119787164193	0.926249282721054
14	81630768	81637986	2	neutral	AA	54.5678	somatic	0	0.354703336244239	0.70569618444324
14	82034976	82037382	0	loss	-	-1	germline	1	0.0832739232564029	0.270053254953252
14	82699032	82720686	2	neutral	AA	100	somatic	0	0.386084753392642	0.855873719871625
14	84104136	84106542	2	neutral	AA	100	somatic	0	0.124208010322981	0.33518389639997
14	84272556	84277368	2	neutral	AA	22.8682	somatic	0	0.60007698460776	0.459950236814544
14	85639164	85643976	2	neutral	AA	36.3812	somatic	0	0.298301589098024	0.318862814924687
14	87530280	87542310	2	neutral	AA	18.2029	somatic	0	0.586717353035501	0.876377354063756
14	87705918	87715542	2	neutral	AA	100	somatic	0	0.0449212493654892	0.221154660674287
14	95337750	95383464	2	neutral	AA	24.992	somatic	0	0.613554439053728	0.986285393738981
14	97693224	97760592	2	neutral	AA	100	somatic	0	0.00333595832580676	0.00792847166188271
14	99925992	99928398	6	gain	AAAABB	8.7	germline	1	0.0832809789655777	0.270065508800909
14	101711244	101725680	2	neutral	AA	100	somatic	0	0.00108907599588837	0.00844139820427248
14	103236648	103241460	3	gain	AAB	14.2313	germline	1	0.0143306634550189	0.0366869598087141
14	104203860	104225514	2	neutral	AA	4.98364	germline	1	0.498917859191687	0.752965717410593
14	105349116	105353928	2	neutral	AA	18.8922	somatic	0	0.924384966429544	0.956721363281853
14	105438138	105519942	2	neutral	AA	99.9224	somatic	0	0.901318575385566	0.818422366606698
15	0	20340324	8	gain	AAAAAABB	-1	somatic	0	0.181711046992323	0.57147678526132
15	20340324	20342730	21	gain	AAAAAAAAAAAAABBBBBBBB	30.6965	germline	1	0.0832668680314683	0.270041001511456
15	20342730	20672352	8	gain	AAAAAABB	19.2285	germline	1	2.07381123021844e-15	0
15	22224222	22231440	5	gain	AAAAB	100	germline	1	0.00270130888545603	0.00495923421053035
15	22243470	22250688	5	gain	AAABB	5.27558	germline	1	0.00270134270089894	0.00495929093900505
15	23595642	23605266	2	neutral	AA	100	somatic	0	0.832675172036313	0.952000541906195
15	26494872	26632014	2	neutral	AA	51.1219	somatic	0	0.000342470359793174	0.000430603674642649
15	33056034	33089718	2	neutral	AA	15.6049	somatic	0	0.0765721153135866	0.13028640709327
15	36412404	36465336	2	neutral	AA	54.5679	somatic	0	0.0237412760230832	0.0772928489882816
15	40021404	40079148	2	neutral	AA	100	somatic	0	0.964134123066115	0.840830338151712
15	44068296	44101980	2	neutral	AA	36.3922	somatic	0	0.0161277299992759	0.0301904989672303
15	45928134	45971442	2	neutral	AA	100	somatic	0	0.233269897725939	0.44236968705165
15	47987670	48004512	2	neutral	AA	100	germline	1	0.0403234508806696	0.0266906397242969
15	48307668	48454434	2	neutral	AA	100	somatic	0	0.00356658097854513	0.0173433609797907
15	50713668	50742540	2	neutral	AA	55.3105	somatic	0	0.00806317166757435	0.0539054028422372
15	52227042	52234260	2	neutral	AA	54.5678	somatic	0	0.120572185684788	0.230039967398215
15	55097400	55107024	2	neutral	AA	100	germline	1	0.222854546426276	0.665836819364036
15	60977664	60992100	2	neutral	AA	54.5679	germline	1	0.923422685779961	0.995997647806879
15	64945158	64983654	2	neutral	AA	81.0784	germline	1	0.000355627601230195	0.000191464980782374
15	66966198	67007100	2	neutral	AA	100	somatic	0	0.531706738492537	0.727102747429536
15	71475042	71511132	2	neutral	AA	54.5678	germline	1	0.878041852670971	0.676986708721838
15	71715642	71737296	2	neutral	AA	36.3788	somatic	0	0.661353203589163	0.722129410453327
15	81096636	81130320	2	neutral	AA	36.3877	somatic	0	0.390122432677449	0.899078075794795
15	88954632	88971474	2	neutral	AA	54.8601	germline	1	0.0327212032454484	0.0916059073262736
15	97272174	97289016	1	loss	A	-1	germline	1	1.29969868787417e-05	6.23429351820359e-06
15	100380726	100392756	2	neutral	AA	100	germline	1	0.21112604713738	0.282726472938608
16	844506	849318	3	gain	AAB	4.8859	somatic	0	0.0143189623981793	0.036654804110657
16	1727508	1741944	2	neutral	AA	49.9627	somatic	0	0.71149600317352	0.995668281994265
16	3734112	3748548	2	neutral	AA	100	somatic	0	0.113073283064033	0.03919602031412
16	8767464	8777088	2	neutral	AA	27.284	somatic	0	0.788654985644368	0.948159003004837
16	10843842	10860684	2	neutral	AA	15.5908	germline	1	0.910519592217163	0.851923037464301
16	13745478	14005326	2	neutral	AA	49.4067	somatic	0	0.647070413849121	0.506785148968417
16	21557760	21581820	3	gain	AAB	3.09797	germline	1	5.22284292711244e-08	7.65907726130166e-09
16	22613994	22695798	3	gain	AAB	0.87877	germline	1	3.21749333299513e-23	0
16	22695798	22698204	3	gain	AAB	22.5304	germline	1	0.0833445021426154	0.270175811694125
16	23186622	23234742	2	neutral	AA	36.3793	somatic	0	0.237913505811688	0.361663178035548
16	27115620	27139680	2	neutral	AA	6.51514	germline	1	0.693563078526115	0.844885936964241
16	28530348	28578468	2	neutral	AA	37.7206	somatic	0	3.81415444062217e-05	0.000229873958886517
16	29863272	29882520	2	neutral	AA	36.3786	somatic	0	0.00332843218751085	0.0035955317777886
16	31821756	31853034	2	neutral	AA	100	germline	1	0.455034746581927	0.511322079290147
16	34061742	34064148	20	gain	AAAAAAAAAAAAABBBBBBB	36.2015	germline	1	0.0832668680314683	0.270041001511456
16	34064148	34066554	6	gain	AAAABB	8.84199	germline	1	0.0832803909713173	0.270064487631435
16	34068960	34083396	2	neutral	AA	15.4998	somatic	0	0.0375021589858405	0.100884590079297
16	34083396	34085802	11	gain	AAAAAAAAAAA	33.5458	germline	1	0.0832698076496772	0.270046107062881
16	34085802	34095426	2	neutral	AA	27.6424	somatic	0	0.0142574048789291	0.0377456776790998
16	34095426	34100238	7	gain	AAAABBB	100	germline	1	0.014310888016317	0.0366388752110796
16	34100238	34160388	2	neutral	AA	2.83204	germline	1	0.54544089963192	0.561474244303099
16	34160388	34206102	3	gain	AAB	0.949455	germline	1	0.000164667236472969	0.00033353944197434
16	34206102	34210914	2	neutral	AA	5.0595	germline	1	0.0866635760718621	0.141556986752619
16	34210914	34213320	4	gain	AAAB	17.4468	germline	1	0.0832827429685365	0.270068572326239
16	34213320	34218132	2	neutral	AA	-1	germline	1	NA	NA
16	34218132	34256628	2	neutral	AA	75.4147	germline	1	0.026957715751196	0.0246548204114996
16	34256628	34595874	2	neutral	AA	-1	germline	1	NA	NA
16	34595874	34959180	2	neutral	AA	0.64143	germline	1	1.6454705129315e-21	2.22044604925031e-16
16	35231058	35522184	3	gain	AAB	2.34742	somatic	0	2.50041196616021e-76	0
16	35988948	36090000	2	neutral	AA	7.45723	somatic	0	0.00267501108365279	0.00072612582826681
16	36121278	36123684	4	gain	-	-1	germline	1	0.0832886231969944	0.270078784260546
16	36123684	36126090	6	gain	-	-1	germline	1	0.0832809789655777	0.270065508800909
16	48454434	48644508	2	neutral	AA	100	somatic	0	0.000113973035900503	0.000189459765481903
16	48964506	48969318	2	neutral	AA	36.3786	somatic	0	0.861760780208237	0.812735065388821
16	57318138	57337386	2	neutral	AA	100	somatic	0	0.00141151780650625	0.00132612028999057
16	57712722	57857082	2	neutral	AA	100	somatic	0	0.447768127187171	0.66556153139538
16	58222794	58427304	2	neutral	AA	100	somatic	0	0.000866262611270147	0.000495299660104087
16	63609828	63624264	2	neutral	AA	100	somatic	0	0.427212049472181	0.638737230617808
16	64591476	64617942	2	neutral	AA	70.038	germline	1	0.00660841375294732	0.0259206984871732
16	67647096	67680780	2	neutral	AA	54.568	somatic	0	0.624531337617493	0.877596653226353
16	68924682	68929494	2	neutral	AA	100	somatic	0	0.71097220735792	0.718292360287409
16	69725880	69812496	2	neutral	AA	20.1519	somatic	0	2.20793347517019e-07	3.47815534040841e-07
16	70149336	70163772	3	gain	AAB	2.66694	germline	1	2.25060138388489e-05	1.3035843979381e-05
16	78033798	78077106	2	neutral	AA	100	somatic	0	0.0692314942416592	0.0604647250612806
16	78281616	78286428	2	neutral	AA	54.5712	somatic	0	0.876223986043632	0.964119089266566
16	78336954	78351390	1	loss	A	-1	germline	1	6.74142401845956e-05	4.43634915752167e-05
16	87171786	87224718	2	neutral	AA	9.6186	somatic	0	0.348525913386009	0.484507762495545
16	87390732	87503814	2	neutral	AA	25.6286	somatic	0	0.360609594761901	0.111734910301579
16	88499898	88502304	4	gain	AABB	5.69286	germline	1	0.0832827429685365	0.270068572326239
16	89998836	90083046	2	neutral	AA	21.4	somatic	0	0.953894093002273	0.723292410710584
17	3825540	3868848	2	neutral	AA	16.2647	somatic	0	0.0881567829653037	0.142775851490742
17	11719626	11731656	2	neutral	AA	54.5678	somatic	0	0.486444957613704	0.52588522297309
17	12301878	12313908	2	neutral	AA	71.9242	germline	1	0.861372653997191	0.905010845099933
17	21290694	21305130	4	gain	AABB	0.247375	germline	1	2.21217127799135e-05	1.23008008284797e-05
17	21853698	21858510	5	gain	-	-1	germline	1	0.0143119086933176	0.036640831065458
17	21858510	21923472	3	gain	-	-1	somatic	0	1.15864969112633e-15	4.51860771022439e-14
17	21966780	21969186	4	gain	-	-1	somatic	0	0.0832862710652548	0.270074699453001
17	21969186	21976404	6	gain	AAAABB	-1	germline	1	NA	NA
17	21976404	21981216	19	gain	-	-1	germline	1	0.0143069914765605	0.0366332875590329
17	21981216	21988434	6	gain	AAAABB	-1	germline	1	NA	NA
17	21988434	22159260	6	gain	AAAABB	0.231837	somatic	0	9.14984757609438e-11	1.3855583347322e-12
17	26773968	26805246	3	gain	-	-1	germline	1	6.79866952512359e-08	2.4532703868374e-08
17	26807652	26814870	4	gain	-	-1	germline	1	0.0143119086933176	0.036640831065458
17	26814870	26822088	3	gain	-	-1	germline	1	0.00291502871500769	0.00569228916688036
17	26822088	26826900	5	gain	-	-1	germline	1	0.0143114447412661	0.0366394340172952
17	26826900	26865396	3	gain	-	-1	germline	1	4.42954934340767e-09	1.31346338250182e-08
17	26865396	26867802	7	gain	-	-1	germline	1	0.0832792149928853	0.270062445300944
17	26867802	26877426	3	gain	-	-1	somatic	0	0.000617994083875311	0.000944533609962939
17	26877426	26879832	5	gain	-	-1	germline	1	0.0832821549641874	0.270067551148311
17	26937576	26939982	19	gain	AAAAAAAAAAAAABBBBBB	100	germline	1	0.0832668680314683	0.270041001511456
17	41137788	41149818	2	neutral	AA	8.40107	somatic	0	0.125559492967816	0.214215170554697
17	54079662	54089286	1	loss	A	-1	germline	1	0.00198582275890672	0.001816394053892
17	57864300	57888360	2	neutral	AA	100	somatic	0	0.986312174325248	0.951716595439781
17	59625492	59673612	2	neutral	AA	100	somatic	0	0.00616536864249246	0.00307992522815936
17	61636908	61802922	2	neutral	AA	55.9326	somatic	0	0.00560608624817804	0.00575805050762346
17	61802922	61896756	2	neutral	AA	53.0631	somatic	0	1.99365062160167e-06	1.18036248220044e-07
17	65402298	65443200	1	loss	A	-1	germline	1	1.13266763989548e-11	1.36335387423969e-13
17	65941242	65967708	2	neutral	AA	54.5678	somatic	0	0.316979804730096	0.497704309176558
17	70002570	70098810	2	neutral	AA	23.4401	somatic	0	0.777975400894304	0.731143236480718
17	72940296	72945108	2	neutral	AA	54.5678	somatic	0	0.0806818517408123	0.133018777068442
17	74939682	75040734	2	neutral	AA	36.3851	somatic	0	0.0670242168282443	0.0884909460735955
17	79631382	79657848	2	neutral	AA	100	somatic	0	0.614699384602587	0.513360776536615
17	80420550	80742954	2	neutral	AA	8.23123	germline	1	0.141993164774255	0.114717313506266
17	80742954	80745360	5	gain	AAAAB	68.5585	germline	1	0.0832821549641874	0.270067551148311
17	82585950	82588356	4	gain	AAAB	24.7068	germline	1	0.083289211238337	0.270079805469479
18	5324478	5326884	1	loss	A	-1	germline	1	0.0833033252395232	0.270104315329426
18	29593800	29598612	1	loss	A	-1	germline	1	0.0210193306912289	0.0573157803094841
18	32144160	32148972	3	gain	AAA	74.5438	somatic	0	0.01432453327853	0.0366640288742132
18	36294510	36337818	2	neutral	AA	100	somatic	0	0.600989823967631	0.950873190355386
18	40678242	40687866	1	loss	A	-1	germline	1	0.0201554999082361	0.0544705337028437
18	41284554	41289366	1	loss	A	-1	germline	1	0.0261533122443854	0.0547387871548468
18	44395512	44402730	1	loss	A	-1	germline	1	0.00698280566801249	0.00958614225931409
18	53692296	54248082	2	neutral	AA	38.1018	somatic	0	0.0692928792840105	0.11771752964673
18	54815898	54844770	2	neutral	AA	54.5678	somatic	0	0.634891417004758	0.641395405134369
18	57279642	57282048	1	loss	A	-1	germline	1	0.083298032262057	0.270095123941693
18	64336440	64382154	2	neutral	AA	54.5678	germline	1	0.154195280974553	0.178887893633211
18	66056730	66063948	1	loss	A	-1	germline	1	0.00508536397389138	0.00919654688290272
18	66239586	66244398	1	loss	A	-1	germline	1	0.0207937699268096	0.0521246108987099
18	74614872	74617278	3	gain	-	-1	somatic	0	0.0832950918367365	0.270090017713824
18	79520706	79523112	1	loss	A	-1	germline	1	0.0891627156523054	0.280134107053987
19	7448976	7451382	7	gain	AAAAABB	38.4514	germline	1	0.0832792149928853	0.270062445300944
19	8870922	8911824	2	neutral	AA	1.12356	germline	1	0.803781402018427	0.995409980796742
19	10627302	10641738	2	neutral	AA	54.5678	somatic	0	0.00455746419476012	0.00896238964759521
19	12458268	12479922	2	neutral	AA	100	germline	1	0.00952119800812034	0.0048913050341195
19	12583380	12588192	0	loss	-	-1	germline	1	0.0143071770048486	0.0366346844021421
19	12975558	13006836	2	neutral	AA	26.4771	somatic	0	0.0423813269760603	0.0254608225971032
19	14101566	14156904	2	neutral	AA	100	somatic	0	0.0154241881681926	0.0302810257255574
19	14741562	14845020	2	neutral	AA	100	somatic	0	7.62042855580841e-05	4.7415153270336e-07
19	14934042	14938854	1	loss	A	-1	germline	1	0.0162466819225068	0.0425310244762845
19	16052832	16057644	2	neutral	AA	21.8272	somatic	0	0.130031174207515	0.274884486957342
19	17424252	17455530	2	neutral	AA	27.5551	germline	1	3.98478370177598e-05	6.95676963681224e-05
19	21115056	21129492	2	neutral	AA	100	germline	1	0.0831992909483212	0.08745014543232
19	21259416	21307536	2	neutral	AA	64.898	somatic	0	5.01873502795193e-05	0.000559013039919787
19	21370092	21386934	2	neutral	AA	21.8272	somatic	0	0.267606123654353	0.396215714029347
19	21516858	21586632	2	neutral	AA	0.322637	germline	1	0.565456490544581	0.46392358767171
19	23650980	23653386	1	loss	A	-1	somatic	0	0.125869426066484	0.337610948782565
19	24329472	24404058	4	gain	AABB	0.216551	somatic	0	1.09426214936765e-20	0
19	27336972	27346596	3	gain	AAB	1.17716	germline	1	0.0287848621908583	0.022239956716204
19	27346596	27380280	5	gain	AAABB	0.203304	germline	1	1.97755285322588e-09	7.56237295007622e-11
19	27380280	27382686	2	neutral	AA	14.9089	germline	1	0.196468154502926	0.431293354745337
19	27382686	27399528	5	gain	AAABB	0.300428	germline	1	4.5988840598769e-06	1.6647228470168e-06
19	28944180	28951398	2	neutral	AA	54.5678	somatic	0	0.356310472165777	0.744858520262619
19	29511996	29514402	0	loss	-	-1	somatic	0	0.0832721594047726	0.270050191554753
19	29574552	29615454	2	neutral	AA	54.5678	somatic	0	0.718484471465006	0.539568891561567
19	30394998	30409434	2	neutral	AA	100	somatic	0	0.134681206442237	0.399720677373534
19	30606726	30623568	2	neutral	AA	54.5678	somatic	0	0.986762204897747	0.729240869608079
19	34391364	34393770	5	gain	AAABB	3.73557	germline	1	0.0832821549641874	0.270067551148311
19	35360982	35370606	1	loss	A	-1	germline	1	0.0011721409630191	0.00130680493988333
19	35524590	35529402	2	neutral	AA	27.2839	somatic	0	0.408507820243788	0.749913580041413
19	37312248	37317060	2	neutral	AA	36.3786	somatic	0	0.506445932516044	0.593364649257376
19	44864682	44871900	2	neutral	AA	100	somatic	0	0.021384876220181	0.0296569758859286
19	45485430	45523926	2	neutral	AA	100	somatic	0	0.00190032358733864	0.00972778133623442
19	46238508	46248132	2	neutral	AA	100	germline	1	0.0558108591491647	0.0582572783543001
19	46284222	46291440	2	neutral	AA	54.5915	somatic	0	0.949356135958605	0.93142265588334
19	47027676	47032488	2	neutral	AA	100	somatic	0	0.754979310113897	0.961543150093737
19	51630354	51644790	3	gain	AAB	3.89729	germline	1	2.22000036175464e-05	1.23526850668298e-05
19	52847790	52915158	2	neutral	AA	11.6732	somatic	0	0.00180238957058294	0.00824620828513467
20	60150	67368	6	gain	-	-1	germline	1	0.0143109808024818	0.0366388752110796
20	21305130	21307536	0	loss	-	-1	germline	1	0.0832662801179145	0.270039980409627
20	28773354	28787790	7	gain	-	-1	germline	1	0.00270107218818576	0.00495917748265073
20	28804632	28823880	10	gain	-	-1	germline	1	4.5960842703981e-06	1.6643230023039e-06
20	28835910	28838316	4	gain	-	-1	germline	1	0.0832886231969944	0.270078784260546
20	29206434	29256960	1	loss	A	-1	germline	1	0.000269072725580674	0.000269149826785053
20	29408538	29410944	4	gain	-	-1	germline	1	0.0832886231969944	0.270078784260546
20	29447034	29449440	1	loss	A	-1	somatic	0	0.118180009009946	0.326218449669052
20	29889738	29894550	4	gain	-	-1	germline	1	0.0143123726586366	0.0366422281602273
20	30156804	30168834	1	loss	A	-1	germline	1	0.000283049148488657	0.000241548258858693
20	30938754	30943566	5	gain	-	-1	germline	1	0.0143114447412661	0.0366394340172952
20	31066272	31068678	39	gain	-	-1	germline	1	0.0832662801179145	0.270039980409627
20	31164918	31167324	5	gain	-	-1	germline	1	0.083281566963201	0.2700665299732
20	31184166	31188978	18	gain	-	-1	germline	1	0.0143070842404393	0.0366335669239267
20	31188978	31191384	4	gain	-	-1	germline	1	0.0832827429685365	0.270068572326239
20	31191384	31239504	3	gain	-	-1	germline	1	2.24275431360615e-05	8.1547698568607e-05
20	31239504	31241910	64	gain	-	-1	germline	1	0.0832662801179145	0.270039980409627
20	31241910	31244316	4	gain	-	-1	germline	1	0.0832903873311116	0.2700818478958
20	38582616	38611488	2	neutral	AA	54.5678	somatic	0	0.0170617176189909	0.0189380228950065
20	39326070	39400656	2	neutral	AA	100	somatic	0	0.00136633244066991	0.0117461038467126
20	43613562	43615968	2	neutral	AA	100	germline	1	0.328054072357948	0.573139484106246
20	43625592	43642434	2	neutral	AA	100	somatic	0	0.021957594136635	0.0364436707678172
20	43642434	43647246	1	loss	A	-1	germline	1	0.014410659940442	0.0369366526187819
20	44503782	44513406	2	neutral	AA	100	somatic	0	0.0388725387503161	0.0519825989566934
20	45526332	45528738	2	neutral	AA	100	germline	1	0.174872785744992	0.404369017614795
20	45538362	45562422	2	neutral	AA	100	somatic	0	0.412910514132185	0.59038973828075
20	46897752	46912188	2	neutral	AA	100	somatic	0	0.208940633477127	0.341160566702072
20	47999700	48035790	2	neutral	AA	15.3564	somatic	0	0.815773195572893	0.903163600700191
20	49801794	49811418	2	neutral	AA	100	somatic	0	0.0570504800644394	0.100265265202092
20	52539822	52583130	2	neutral	AA	100	somatic	0	0.934451864419985	0.860636271306447
20	52703430	52710648	2	neutral	AA	28.559	somatic	0	0.0205135467770361	0.0278033582767161
20	54736500	54777402	2	neutral	AA	100	germline	1	0.885478419764195	0.92666547291298
20	55289880	55297098	2	neutral	AA	54.5678	somatic	0	0.273838377138249	0.269159642615792
20	60313608	60318420	2	neutral	AA	12.9633	somatic	0	0.130274467057225	0.405591757642453
20	62103672	62154198	2	neutral	AA	18.8114	germline	1	0.76081510766485	0.836913736149345
20	63600204	63619452	2	neutral	AA	100	somatic	0	0.712679718501384	0.96208941429246
21	10271214	10273620	34	gain	-	-1	germline	1	0.0832668680314683	0.270041001511456
21	10653768	10656174	6	gain	AAAABB	7.35944	germline	1	0.083281566963201	0.2700665299732
21	10656174	10658580	4	gain	AAAA	12.8211	germline	1	0.0832850950195633	0.27007265706614
21	10658580	10660986	6	gain	AAAABB	12.214	germline	1	0.0832809789655777	0.270065508800909
21	10660986	10692264	3	gain	AAB	0.575617	germline	1	1.98052690498113e-09	7.58281215595957e-11
21	10692264	10694670	58	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBB	100	germline	1	0.0832662801179145	0.270039980409627
21	10694670	10704294	3	gain	AAB	1.64496	germline	1	0.000532856794606602	0.000671846832503986
21	10704294	10709106	6	gain	AAAABB	4.7651	germline	1	0.0143110735891773	0.0366391546132554
21	10709106	10716324	4	gain	AAAB	1.97225	germline	1	0.00270227277717082	0.00496150381354121
21	10716324	10721136	5	gain	AAABB	1.44357	germline	1	0.0143113519524479	0.0366394340172952
21	10721136	10730760	3	gain	AAB	1.39444	germline	1	0.000532680222242389	0.000671621448662063
21	10730760	10733166	5	gain	AAAAB	12.1862	germline	1	0.0832821549641874	0.270067551148311
21	10733166	10737978	3	gain	AAB	8.22451	germline	1	0.0143197050717885	0.0366581583351517
21	10752414	10754820	13	gain	AAAAAAAAAABBB	3.8863	germline	1	0.0832698076496772	0.270046107062881
21	16182756	16218846	2	neutral	AA	36.3788	somatic	0	0.654931380071294	0.862358886548316
21	16969518	16974330	1	loss	A	-1	germline	1	0.0254824732602993	0.0518141738895921
21	17953572	17958384	1	loss	A	-1	germline	1	0.0206019775381393	0.0560777715068286
21	18247104	18251916	1	loss	A	-1	germline	1	0.0212312151578038	0.0564531601228806
21	20287392	20289798	1	loss	A	-1	germline	1	0.0865837718631921	0.275754687813965
21	20585736	20590548	1	loss	A	-1	somatic	0	0.0212630986812865	0.0570289043482672
21	28130952	28150200	2	neutral	AA	27.3364	somatic	0	0.197624511471759	0.256520624089796
21	28852752	28867188	2	neutral	AA	100	germline	1	0.654051225809008	0.469442409886996
21	32115288	32136942	2	neutral	AA	100	somatic	0	0.807876383799509	0.572590533802609
21	36645786	36650598	2	neutral	AA	100	germline	1	0.365783907190324	0.641390669547171
21	41472222	41477034	1	loss	A	-1	somatic	0	0.0292803146807679	0.0566355476450251
21	41804250	41806656	3	gain	AAA	57.3405	germline	1	0.0832956799150741	0.270091038953761
21	43262286	43264692	6	gain	AAAABB	8.2406	germline	1	0.083281566963201	0.2700665299732
21	43279128	43281534	1	loss	A	-1	germline	1	0.0875725041380946	0.277440061850399
21	45552798	45555204	1	loss	A	-1	somatic	0	0.0840138677891575	0.271335977422228
21	45795804	45798210	4	gain	AAAA	8.24672	germline	1	0.0832886231969944	0.270078784260546
21	45966630	45978660	1	loss	A	-1	germline	1	0.00391916121426682	0.0076697623156029
22	11620980	11630604	4	gain	AAAB	38.6248	germline	1	0.00270173160629486	0.00495991499148618
22	12691650	12694056	12	gain	AAAAAAAABBBB	100	germline	1	0.0832698076496772	0.270046107062881
22	17876580	17878986	3	gain	AAB	24.1991	germline	1	0.083298032262057	0.270095123941693
22	23703912	23737596	2	neutral	AA	54.5678	germline	1	0.00758933178251053	0.0192257876739599
22	29119818	29122224	3	gain	AAB	20.0877	somatic	0	0.0833056777614009	0.270108400463922
22	35161284	35194968	2	neutral	AA	74.3919	somatic	0	0.782477276315009	0.607529404713876
22	35194968	35197374	1	loss	A	-1	somatic	0	0.125910671668302	0.337671865191373
22	36746838	36751650	1	loss	A	-1	germline	1	0.0166200641079594	0.0426065024167744
22	37078866	37098114	2	neutral	AA	15.1359	somatic	0	0.24564400202674	0.37636299634726
22	38541714	38666826	2	neutral	AA	100	somatic	0	4.96736730241935e-06	4.13093661600916e-05
22	42884544	42956724	2	neutral	AA	57.5948	somatic	0	0.168473319934161	0.0803807559700439
22	42988002	43007250	2	neutral	AA	100	somatic	0	0.498139593174046	0.839645196788118
22	45006636	45011448	1	loss	A	-1	somatic	0	0.0301291814886243	0.0577654170433878
22	49431270	49450518	2	neutral	AA	38.2503	somatic	0	0.163676889685104	0.340758077000522
22	49823448	49830666	2	neutral	AA	100	somatic	0	0.499231235728489	0.94115991111971
22	50641488	50646300	3	gain	AAB	12.4601	germline	1	0.014328062491522	0.0366858409355023
X	3522384	3524790	2	gain	-	-1	somatic	0	0.680984398805021	0.838632857691247
X	5240268	5247486	0	loss	-	-1	germline	1	0.0143135790305601	0.0366469786310777
X	38724570	38729382	0	loss	-	-1	germline	1	0.0143064349044298	0.0366324494755357
X	49140144	49142550	2	gain	AB	1.33555	somatic	0	0.245434223708411	0.487932451573608
X	78267180	78271992	2	gain	-	-1	somatic	0	0.458282360643569	0.87867141131774
X	119739402	119744214	0	loss	-	-1	germline	1	0.0143113519524479	0.0366461402735396
X	126776952	126781764	0	loss	-	-1	germline	1	0.0146087384412785	0.0375442719911453
X	131870454	131875266	0	loss	-	-1	germline	1	0.0143080119084086	0.0366346844021421
X	155559930	155562336	0	loss	-	-1	germline	1	0.0832674559483847	0.270042022616105
Y	10656174	10658580	8	gain	-	-1	germline	1	0.0832792149928853	0.270062445300944
Y	10754820	10757226	4	gain	-	-1	germline	1	0.0832850950195633	0.27007265706614
Y	10757226	10759632	2	gain	-	-1	germline	1	0.365577854540681	0.608372563104127
Y	10759632	10762038	7	gain	-	-1	germline	1	0.0832798029804198	0.270063466464781
Y	10762038	10764444	4	gain	-	-1	germline	1	0.0832886231969944	0.270078784260546
Y	10764444	10774068	3	gain	-	-1	germline	1	0.000571963651324004	0.000797910574738547
Y	10774068	10776474	4	gain	-	-1	germline	1	0.0832845070017621	0.270071635876937
Y	10776474	10788504	2	gain	-	-1	germline	1	0.25084748704881	0.0570856308164792
Y	10788504	10790910	4	gain	-	-1	germline	1	0.0832886231969944	0.270078784260546
Y	10790910	10795722	2	gain	-	-1	germline	1	0.880499680724219	0.864612700595938
Y	10795722	10798128	7	gain	-	-1	germline	1	0.0832792149928853	0.270062445300944
Y	10798128	10802940	3	gain	-	-1	germline	1	0.0143170130416086	0.0366542450993486
Y	10802940	10824594	2	gain	-	-1	germline	1	0.147008303515664	0.0180093935352077
Y	10824594	10827000	3	gain	-	-1	germline	1	0.0832909753825436	0.270082869113188
Y	10843842	10846248	4	gain	-	-1	germline	1	0.0832886231969944	0.270078784260546
Y	10846248	10887150	2	gain	-	-1	germline	1	7.64621432568137e-05	0.000292781218713234
Y	10887150	10896774	3	gain	-	-1	germline	1	0.00342847708817098	0.00760013899829082
Y	10923240	10928052	3	gain	-	-1	germline	1	0.01431756997674	0.0366542450993486
Y	10928052	10935270	2	gain	-	-1	germline	1	0.0445155235665955	0.184803255660292
Y	10935270	10937676	4	gain	-	-1	germline	1	0.0832874471243985	0.270076741851137
Y	10937676	10985796	2	gain	-	-1	germline	1	0.102780109764371	0.00195701012019933
Y	10985796	10988202	12	gain	-	-1	germline	1	0.0832698076496772	0.270046107062881
Y	10988202	10990608	3	gain	-	-1	germline	1	0.0833050896258863	0.27010737917607
Y	10990608	10997826	2	gain	-	-1	germline	1	0.832421381523525	0.702812400169291
Y	10997826	11000232	8	gain	-	-1	germline	1	0.0832774510504589	0.270059381826347
Y	11024292	11036322	2	gain	-	-1	germline	1	0.460899044316986	0.605966788427886
Y	11291358	11305794	29	gain	AAAAAAAAAAAAAAAAAAABBBBBBBBBB	3.8501	germline	1	2.20940810386293e-05	1.22901116555996e-05
Y	11305794	11315418	10	gain	AAAAAAABBB	100	germline	1	0.0143091251800103	0.0366385958107681
Y	11315418	11317824	4	gain	AAAB	3.26202	germline	1	0.0832856830407275	0.270073678258161
Y	11320230	11325042	10	gain	AAAAAABBBB	70.3634	germline	1	0.0143091251800103	0.0366385958107681
Y	11329854	11334666	14	gain	AAAAAAAAABBBBB	3.22791	germline	1	0.0143077336024467	0.0366355225303756
Y	11685942	11688348	3	gain	AAA	100	germline	1	0.0833021489987649	0.270102272779088
Y	11688348	11690754	7	gain	AAAAABB	47.7703	germline	1	0.0832798029804198	0.270063466464781
Y	11717220	11719626	4	gain	AAAA	4.75015	germline	1	0.0832850950195633	0.27007265706614
Y	11719626	11724438	22	gain	AAAAAAAAAAAAAAABBBBBBB	32.8457	germline	1	0.0143066204263511	0.0366321701180976
Y	11729250	11731656	3	gain	AAB	10.258	germline	1	0.0832933276219032	0.270086954010926
Y	11731656	11743686	2	gain	AA	14.1034	germline	1	0.101569549759641	0.108583878704422
Y	11743686	11746092	3	gain	AAB	9.33794	germline	1	0.0832945037617622	0.270088996476706
Y	11746092	11748498	13	gain	AAAAAAAAABBBB	6.30646	germline	1	0.0832698076496772	0.270046107062881
Y	26636826	26641638	4	gain	AABB	6.2792	germline	1	0.0143129294345329	0.0366425075847741
Y	26653668	26656074	2	gain	AA	10.7863	germline	1	0.65088715620281	0.821332433424059
Y	56824908	56832126	18	gain	AAAAAAAAAAAABBBBBB	29.3137	germline	1	0.00270005798595422	0.0049579296197757
Y	56832126	56834532	48	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBB	100	germline	1	0.0832662801179145	0.270039980409627
Y	56834532	56851374	12	gain	AAAAAAAABBBB	1.58372	germline	1	0.000107552892099077	9.08370861213426e-05
