chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	2009984	2028352	2	neutral	AA	54.5679	somatic	0	0.9383216307587	0.894831483601326
1	2398336	2419328	2	neutral	AA	21.8865	somatic	0	0.770076589242004	0.668930830681172
1	5667840	5673088	3	gain	AAB	1.28205	germline	1	0.014325102050342	0.0366807201011902
1	8304960	8310208	2	neutral	AA	100	somatic	0	0.102382218436678	0.147407359043128
1	11327808	11375040	2	neutral	AA	21.8928	somatic	0	0.0176805387710053	0.0153671136904111
1	16612544	16636160	7	gain	AAAABBB	45.2623	germline	1	0.00270050536641137	0.00495852442751266
1	16720128	16725376	4	gain	AAAB	5.06103	germline	1	0.0143109349843898	0.0366392757529903
1	16882816	16943168	3	gain	AAB	0.761284	germline	1	4.59903877692788e-08	5.99689020663874e-09
1	18042624	18050496	2	neutral	AA	10.8704	somatic	0	0.934618367279962	0.998730972381896
1	20461952	20643008	2	neutral	AA	17.7548	somatic	0	7.87642534292675e-05	0.000211823380246723
1	26413184	27355200	2	neutral	AA	7.90525	somatic	0	9.7986891083614e-45	0
1	31430272	31432896	8	gain	AAAAAAAA	6.36688	germline	1	0.0832709253846265	0.270048002521887
1	31432896	31508992	2	neutral	AA	100	somatic	0	0.145689962728814	0.177471151287675
1	42235904	42834176	2	neutral	AA	16.2245	somatic	0	0.00069457983443029	0.000976053467465543
1	53621440	53645056	2	neutral	AA	100	somatic	0	0.396597827120871	0.657738449044184
1	55660288	55668160	1	loss	A	-1	somatic	0	0.00389775609991082	0.00954076395316317
1	55899072	55935808	2	neutral	AA	54.5678	somatic	0	0.0159124291024766	0.0595582071405677
1	56229696	56269056	2	neutral	AA	54.5728	somatic	0	0.179908483185465	0.198295231860518
1	67093056	67124544	2	neutral	AA	100	somatic	0	0.601796382047858	0.844921492587256
1	72301696	72346304	1	loss	A	-1	germline	1	6.81046790753389e-12	1.27231558622043e-13
1	76337408	76374144	2	neutral	AA	100	somatic	0	0.0721379924475661	0.118718730659556
1	80892672	80987136	2	neutral	AA	100	somatic	0	0.00639438275599964	0.0446652702703926
1	86109184	86117056	2	neutral	AA	100	somatic	0	0.0507267487221463	0.0571636963796168
1	94576832	94605696	2	neutral	AA	54.568	somatic	0	0.0100493880867186	0.0295035594055864
1	100218432	100284032	2	neutral	AA	22.4754	somatic	0	0.330051071472169	0.353529714891967
1	109643840	109649088	0	loss	-	-1	somatic	0	0.0143084064521507	0.0366356208664947
1	125080832	125083456	8	gain	-	-1	germline	1	0.0832696435315297	0.270045776211604
1	125151680	125164800	3	gain	-	-1	germline	1	0.110708297212639	0.0547182598238699
1	159478848	159499840	2	neutral	AA	100	somatic	0	0.26158712840086	0.537554976636969
1	169258496	169271616	1	loss	A	-1	germline	1	0.000280358446869221	0.000242504788594
1	178668160	178678656	2	neutral	AA	100	somatic	0	0.344795633563821	0.612656066554868
1	197201472	197256576	2	neutral	AA	54.5678	somatic	0	0.152464467947329	0.504534727313126
1	209904256	209912128	1	loss	A	-1	somatic	0	0.00520726027395702	0.00881366305423892
1	224582912	224829568	2	neutral	AA	100	somatic	0	0.00845586971984089	0.0363703797575365
1	228067584	228072832	1	loss	A	-1	somatic	0	0.0144627574837994	0.0370992720904164
1	228172544	228193536	2	neutral	AA	12.1314	somatic	0	0.0481142787743346	0.0567609220459224
1	230969728	231011712	2	neutral	AA	2.16245	somatic	0	0.793467664802245	0.894899460025974
1	234774528	234777152	3	gain	AAB	12.8175	somatic	0	0.083295924715147	0.27009141825032
1	234777152	234782400	6	gain	AAAABB	4.43369	somatic	0	0.0143089121270687	0.0366359254281863
1	236097024	236099648	5	gain	AAAAA	80.8255	somatic	0	0.0832779758623916	0.270060247467932
2	3180288	3182912	6	gain	-	-1	germline	1	0.0832741300873025	0.270053568356211
2	34471488	34505600	1	loss	A	-1	germline	1	1.31859148632301e-08	7.50477346933565e-10
2	48622720	48630592	1	loss	A	-1	somatic	0	0.0044603953961575	0.00986433250436636
2	52521984	52558720	1	loss	A	-1	germline	1	4.99827982608679e-09	1.55384816125093e-10
2	53868096	53978304	1	loss	A	-1	germline	1	1.82579864242884e-26	0
2	89772288	89774912	4	gain	-	-1	germline	1	0.0832818217813506	0.270066926700233
2	89774912	89780160	6	gain	-	-1	germline	1	0.0143092155395864	0.0366362299920919
2	89780160	89790656	4	gain	-	-1	germline	1	0.00270186924441721	0.00496075087677028
2	89795904	89824768	4	gain	-	-1	germline	1	2.03919306635463e-07	3.05335453587574e-08
2	89824768	89827392	7	gain	-	-1	germline	1	0.0832728481942434	0.270051342012433
2	89827392	89840512	23	gain	-	-1	germline	1	0.000107525384397095	9.08121268659023e-05
2	89840512	89843136	8	gain	-	-1	germline	1	0.0832709253846265	0.270048002521887
2	89843136	89851008	4	gain	-	-1	germline	1	0.00270146370144053	0.00495963753761808
2	91412288	91414912	4	gain	-	-1	germline	1	0.0832786168388937	0.270061360664942
2	109197760	109200384	11	gain	-	-1	germline	1	0.0832683616944176	0.270043549914718
2	117040896	117046144	1	loss	A	-1	germline	1	0.0196139295569955	0.0529946182659065
2	146104320	146120064	1	loss	A	-1	germline	1	8.73862028537574e-05	5.15547779030845e-05
2	227377472	227393216	3	gain	-	-1	germline	1	2.21831506010453e-05	1.23560277709434e-05
2	239174976	239177600	2	neutral	AA	36.3892	somatic	0	0.43874218025283	0.671798477748299
2	239266816	239269440	2	neutral	AA	100	somatic	0	0.598865228375335	0.789189189788507
2	239644672	239647296	2	neutral	AA	100	somatic	0	0.231835926255787	0.472716172699189
2	239815232	239820480	2	neutral	AA	11.0527	somatic	0	0.0541688237225431	0.14850059446927
2	241345024	241352896	2	neutral	AA	74.2561	somatic	0	0.286240508410392	0.403896327726097
2	241670400	241680896	2	neutral	AA	54.6512	somatic	0	0.76997122661759	0.794232645986122
3	18974144	19047616	2	neutral	AA	27.4606	somatic	0	0.0309263238868367	0.0370730746124064
3	32060032	32067904	1	loss	A	-1	germline	1	0.0207539591662696	0.0565966746336953
3	33041408	33164736	2	neutral	AA	40.4729	somatic	0	0.876515040349812	0.899336763759956
3	38764352	38774848	2	neutral	AA	54.5679	somatic	0	0.60872531919466	0.650452017375897
3	45500160	45510656	1	loss	A	-1	germline	1	0.000934836361358159	0.00160357474747064
3	45975104	46573376	2	neutral	AA	100	somatic	0	2.78532435159066e-07	0.000120112276185802
3	46754432	46806912	1	loss	A	-1	germline	1	1.07258478350781e-07	2.38735528013123e-08
3	52556096	52613824	2	neutral	AA	18.283	somatic	0	6.46924748206765e-05	5.26238750055974e-05
3	59648768	59672384	2	neutral	AA	70.038	somatic	0	0.830176552154314	0.932810932693972
3	68155776	68168896	2	neutral	AA	100	somatic	0	0.251676420972647	0.351892972641049
3	75712896	75865088	2	neutral	AA	1.01979	germline	1	0.0135574541202517	0.00759792044954977
3	90352192	90457152	2	neutral	AA	18.3794	somatic	0	0.288496915776286	0.237798746122527
3	90669696	90714304	1	loss	A	-1	germline	1	4.05908739806263e-10	8.4275919576271e-12
3	94797248	94820864	2	neutral	AA	100	somatic	0	0.751916170369715	0.950175320862915
3	98688640	98696512	1	loss	A	-1	germline	1	0.00601412059553473	0.00931173711857425
3	99003520	99113728	2	neutral	AA	100	somatic	0	0.0224136733568825	0.0835186871255712
3	99179328	99184576	1	loss	A	-1	germline	1	0.0143939371298316	0.0368643590411867
3	113495872	113574592	2	neutral	AA	69.8164	somatic	0	0.0853843329976558	0.141798297837769
3	119008896	119029888	3	gain	AAB	3.86061	germline	1	9.67884540073491e-07	2.25977739187755e-07
3	119029888	119035136	3	gain	-	-1	germline	1	0.0143198385537859	0.0366520703681344
3	119035136	119053504	3	gain	AAB	3.90826	germline	1	0.000107797132101673	9.10937643010534e-05
3	119058752	119100736	4	gain	AAAB	2.67335	germline	1	1.97644530815743e-11	1.87849735766576e-13
3	119100736	119103360	3	gain	AAB	20.3508	germline	1	0.0833510729284877	0.270187173501561
3	122467328	122609024	2	neutral	AA	54.5678	germline	1	0.0476167680312612	0.0536638209175366
3	128392320	128631104	2	neutral	AA	4.62897	somatic	0	0.000811109987441117	0.00828748599514173
3	128633728	128662592	2	neutral	AA	33.1249	somatic	0	0.00538563909973107	0.0149209834670738
3	128662592	128683584	3	gain	AAB	100	germline	1	1.39945830123421e-06	1.37895997820436e-06
3	128683584	128696704	4	gain	AAAB	100	germline	1	0.000107676117334416	9.09897076968313e-05
3	130326208	130336704	2	neutral	AA	72.6236	somatic	0	0.682603651205441	0.838698473984698
3	136870464	136896704	2	neutral	AA	100	somatic	0	0.943056650608816	0.865412324368361
3	137864960	137891200	2	neutral	AA	100	somatic	0	0.124651436346955	0.153902801293386
3	142895168	142931904	2	neutral	AA	100	somatic	0	0.129341158261225	0.121589605792818
3	153965824	154010432	2	neutral	AA	100	somatic	0	0.970587160733613	0.794234879906509
3	158305920	158334784	2	neutral	AA	36.3786	somatic	0	0.408099638837819	0.3129343675686
3	161848320	162081856	2	neutral	AA	100	somatic	0	2.83768314874064e-05	3.7705600245741e-05
3	162808704	162827072	1	loss	A	-1	germline	1	9.89831440638425e-06	7.01089011712064e-06
3	173522496	173572352	3	gain	AAB	1.58481	germline	1	4.40125750777178e-14	1.11022302462516e-16
3	193157888	193168384	1	loss	A	-1	germline	1	0.00151891291260899	0.00157084287920262
3	193325824	193375680	2	neutral	AA	51.1219	germline	1	0.102638022387454	0.0769758478866021
4	125952	133824	1	loss	A	-1	germline	1	0.0144343996152514	0.0370112956004089
4	553664	556288	4	gain	AAAB	43.3877	germline	1	0.0832831037863087	0.270069153137797
4	6573120	6580992	2	neutral	AA	9.92667	somatic	0	0.67755009679397	0.739230382093647
4	7176640	7184512	2	neutral	AA	6.84512	somatic	0	0.0302686464894277	0.0343633103204816
4	10209984	10233600	1	loss	A	-1	germline	1	1.62509738091184e-06	2.11280053785678e-07
4	10391040	10401536	1	loss	A	-1	germline	1	0.00108150831661827	0.00159308621201415
4	17061248	17139968	2	neutral	AA	100	somatic	0	0.985021540101003	0.280014769801863
4	18444096	18514944	2	neutral	AA	100	somatic	0	0.606305319624549	0.0582851272747255
4	25040832	25048704	2	neutral	AA	100	somatic	0	0.728179365322032	0.936874195441
4	25625984	25652224	2	neutral	AA	100	somatic	0	0.278645300835159	0.510823446549324
4	40294144	40296768	4	gain	AAAA	10.8839	germline	1	0.0832786168388937	0.270061360664942
4	43844416	43889024	2	neutral	AA	18.4682	somatic	0	0.0240656166630124	0.0747962403800086
4	45206272	45211520	2	neutral	AA	23.4592	somatic	0	0.9756997701658	0.984159681875114
4	46200768	46203392	0	loss	-	-1	germline	1	0.0832702844560801	0.270046889365067
4	49084544	49089792	2	neutral	AA	100	somatic	0	0.110140738866441	0.239802880961884
4	49653952	49656576	9	gain	AAAAAAABB	39.9838	germline	1	0.0832696435315297	0.270045776211604
4	59113472	59121344	3	gain	AAB	9.17489	germline	1	0.00270467269798863	0.00496433986150935
4	63828800	63849792	1	loss	A	-1	germline	1	1.72657607780462e-05	6.67971446188798e-06
4	66985472	66993344	2	neutral	AA	100	somatic	0	0.706378231591506	0.980337105781686
4	69265728	69365440	1	loss	A	-1	germline	1	1.06488552805371e-05	2.60692467202173e-06
4	70619712	70624960	1	loss	A	-1	germline	1	0.0208117654466051	0.0567603293966833
4	71157632	71176000	2	neutral	AA	55.071	somatic	0	0.639253095603373	0.492634935833881
4	103288512	103335744	2	neutral	AA	54.6585	somatic	0	0.0559165388775603	0.152833045599329
4	105949248	105970240	2	neutral	AA	100	somatic	0	0.0276323665980909	0.0313161992870571
4	111942464	112063168	2	neutral	AA	54.5678	somatic	0	0.00012728223005539	0.00196942162497593
4	131367936	131394176	2	neutral	AA	54.5678	somatic	0	0.0794498742627201	0.157143687754599
4	132876736	132902976	2	neutral	AA	54.8373	somatic	0	0.381420591592806	0.657070070793677
4	134561344	134629568	2	neutral	AA	66.5364	somatic	0	0.598710444476923	0.645627048028553
4	137169600	137180096	1	loss	A	-1	germline	1	0.00146025223170547	0.00158646986173827
4	144739840	144779200	2	neutral	AA	47.8934	somatic	0	0.88222898031313	0.984817310298103
4	149344960	149436800	2	neutral	AA	18.9246	somatic	0	0.555455740680209	0.659129210413402
4	159801600	159819968	2	neutral	AA	54.5678	somatic	0	0.464547860121675	0.3804888098743
4	161095232	161105728	2	neutral	AA	100	somatic	0	0.377780588987071	0.762442808090208
4	165075840	165081088	2	neutral	AA	100	somatic	0	0.957981757042614	0.957250650259801
4	165081088	165083712	0	loss	-	-1	germline	1	0.0832677207818558	0.270042436771296
4	165083712	165094208	2	neutral	AA	54.5678	somatic	0	0.101012871353765	0.195378102600948
4	172504384	172512256	1	loss	A	-1	germline	1	0.00549670311980594	0.00934827239798208
4	172793024	173428032	2	neutral	AA	15.6381	somatic	0	5.00572169794789e-09	1.54053980905289e-06
4	173483136	173485760	0	loss	-	-1	germline	1	0.0832818217813506	0.270066926700229
4	182989888	182997760	2	neutral	AA	100	somatic	0	0.0524266452203817	0.100278100713431
4	186406336	186429952	2	neutral	AA	19.1697	somatic	0	0.701234441100228	0.404872517458609
5	12810368	12820864	1	loss	A	-1	germline	1	0.00128303715487927	0.00141634855691863
5	37872192	37882688	2	neutral	AA	100	somatic	0	0.17450427342445	0.164645835884967
5	41409344	41467072	2	neutral	AA	100	somatic	0	0.12051635859208	0.329652242623209
5	45004224	45014720	1	loss	A	-1	germline	1	0.00146591680700223	0.00156441088231885
5	45371584	45376832	1	loss	A	-1	germline	1	0.0174203565883011	0.0461436366776138
5	49656576	49659200	164	gain	-	-1	germline	1	0.0832651571715695	0.27003798423112
5	52910336	52912960	0	loss	-	-1	germline	1	0.0832760529568635	0.270056907896995
5	68990208	68995456	2	neutral	AA	54.5678	somatic	0	0.588035313231597	0.552856564074613
5	76153728	76198336	2	neutral	AA	11.6037	somatic	0	0.0232173541469641	0.0899780691593292
5	82973504	83078464	2	neutral	AA	100	somatic	0	0.0434281387203469	0.036679169923261
5	86917376	86922624	1	loss	A	-1	germline	1	0.0159241998757619	0.0415402109746312
5	96912192	96993536	2	neutral	AA	100	somatic	0	0.0587769795292612	0.19001047153547
5	99008768	99011392	0	loss	-	-1	germline	1	0.0832696435315297	0.2700457762116
5	107179904	107187776	2	neutral	AA	100	somatic	0	0.232993028868892	0.316438513259345
5	109462784	109588736	2	neutral	AA	37.4804	somatic	0	0.113420318885174	0.174968759719979
5	127867520	127922624	2	neutral	AA	100	somatic	0	0.487445279160702	0.367963156998545
5	141984640	142000384	2	neutral	AA	44.3318	somatic	0	0.0325925349897787	0.0228571565246878
5	148114304	148132672	2	neutral	AA	100	somatic	0	0.925657065224418	0.743806664313747
5	151383808	151410048	2	neutral	AA	94.9941	somatic	0	0.90428899551834	0.856239973358137
5	151410048	151412672	0	loss	-	-1	germline	1	0.0832664389687204	0.270040210494507
5	151575360	151588480	2	neutral	AA	100	somatic	0	0.590877364335977	0.936715657289789
5	154524736	154598208	2	neutral	AA	30.3184	somatic	0	0.938992573455348	0.95705095734998
5	166293376	166309120	1	loss	A	-1	germline	1	8.12801933499103e-05	4.81474550033667e-05
5	178584192	178586816	7	gain	AAAABBB	54.8131	germline	1	0.0832728481942434	0.270051342012433
5	180951040	181003520	1	loss	A	-1	germline	1	3.81461859110956e-13	5.55111512312578e-16
6	257152	383104	3	gain	-	-1	germline	1	3.56352213985882e-31	0
6	19039744	19050240	1	loss	A	-1	germline	1	0.00116843647644771	0.00175819593676108
6	32487744	32561216	0	loss	-	-1	germline	1	9.22129700158889e-09	5.58314727783227e-10
6	32561216	32574336	1	loss	A	-1	germline	1	0.00521146184631751	0.00941363139905915
6	32574336	32576960	3	gain	-	-1	germline	1	0.0832984890927595	0.270095871433602
6	32579584	32603200	0	loss	-	-1	germline	1	0.0029314021461434	0.00575630693085549
6	32603200	32666176	1	loss	A	-1	germline	1	1.27241007970016e-05	1.82169746354433e-06
6	33970304	33975552	1	loss	A	-1	somatic	0	0.0188887130266474	0.0477042927005624
6	35657536	35662784	1	loss	A	-1	germline	1	0.0143970382512976	0.0368796729974116
6	54067520	54070144	0	loss	-	-1	germline	1	0.0832657980681469	0.270039097361137
6	60231296	60239168	3	gain	-	-1	germline	1	0.00349754711525532	0.00790707397221624
6	60239168	60241792	5	gain	-	-1	germline	1	0.0832786168388937	0.270061360664942
6	66297984	66339968	1	loss	A	-1	germline	1	6.80229433719175e-11	8.10129741068977e-13
6	73881344	73891840	1	loss	A	-1	germline	1	0.0011522350420733	0.00159051153137468
6	78811840	78817088	1	loss	A	-1	somatic	0	0.020883093422489	0.0501867664255053
6	101821696	101847936	2	neutral	AA	100	somatic	0	0.526194174601937	0.738761371540858
6	103288512	103314752	1	loss	A	-1	germline	1	1.72409005491352e-06	2.49419948361584e-07
6	104322368	104343360	2	neutral	AA	36.513	somatic	0	0.262342503724979	0.413278534050599
6	115322176	115335296	2	neutral	AA	100	somatic	0	0.47617844189852	0.510131579165245
6	117169472	117190464	2	neutral	AA	100	somatic	0	0.715119477085116	0.863075650907732
6	119567808	119588800	2	neutral	AA	99.0969	somatic	0	0.725384892522777	0.405510975050352
6	121247168	121255040	2	neutral	AA	100	somatic	0	0.746209980455835	0.928365433926342
6	122399104	122504064	2	neutral	AA	34.3678	somatic	0	0.057599712352198	0.245032765698284
6	122632640	122774336	2	neutral	AA	47.0375	somatic	0	0.619363400417841	0.240852181282156
6	128791168	128827904	2	neutral	AA	100	somatic	0	0.078058529982683	0.372022941808861
6	129090304	129127040	2	neutral	AA	38.7332	somatic	0	0.0411884666490046	0.043114271556944
6	135059904	135065152	2	neutral	AA	100	somatic	0	0.0318752642450177	0.0651641640143167
6	141698624	141703872	2	neutral	AA	54.5678	somatic	0	0.77527071186951	0.699533999248432
6	148363584	148379328	2	neutral	AA	100	somatic	0	0.98716061456962	0.618607930076424
6	148442304	148450176	2	neutral	AA	54.5679	somatic	0	0.927033745878729	0.775777626901566
6	150706816	150717312	2	neutral	AA	54.5686	somatic	0	0.791421578959757	0.873081551988922
6	153420032	153433152	2	neutral	AA	0.548287	germline	1	0.00081538832023151	0.00712214340600759
6	153968448	153981568	2	neutral	AA	54.5678	somatic	0	0.337238607520825	0.554501923098782
6	157308800	157311424	9	gain	AAAAAABBB	4.6619	germline	1	0.0832696435315297	0.270045776211604
6	157314048	157316672	4	gain	AABB	53.6203	germline	1	0.0832798988038871	0.27006358706901
6	159263680	159284672	2	neutral	AA	68.938	somatic	0	0.325851911871358	0.396947051037534
6	165676736	165687232	2	neutral	AA	30.1235	germline	1	0.726280391261985	0.474164176687031
6	165957504	165981120	2	neutral	AA	18.0075	somatic	0	0.035461434842701	0.0389670344128806
6	168654976	168728448	2	neutral	AA	42.6049	somatic	0	0.554925915722681	0.538878167119273
7	24413696	24418944	2	neutral	AA	100	somatic	0	0.308261985075738	0.307496988520855
7	32616320	32645184	2	neutral	AA	55.0709	somatic	0	0.820924458063029	0.908295162008379
7	49874368	49884864	1	loss	A	-1	germline	1	0.000945209472081939	0.00120358122569952
7	57880192	57982528	2	neutral	AA	1.85713	somatic	0	0.004629386700466	0.0050282890038561
7	57982528	57985152	2	neutral	AA	-1	somatic	0	NA	NA
7	58061248	61049984	2	neutral	AA	-1	somatic	0	9.83137503622921e-05	0.00152487745758079
7	61049984	61052608	4	gain	-	-1	germline	1	0.0832786168388937	0.270061360664942
7	61052608	61963136	2	neutral	AA	7.84658	somatic	0	0.321387700540139	0.252303179553931
7	62296384	62359360	3	gain	AAB	0.374862	germline	1	1.38858345284002e-07	4.45033678242446e-07
7	62401344	62406592	4	gain	-	-1	germline	1	0.0143106315397108	0.0366383620014596
7	65240512	65733824	2	neutral	AA	3.20128	somatic	0	0.00266163683981214	0.00269454460857066
7	68992832	69042688	2	neutral	AA	23.6924	somatic	0	0.0406529984550521	0.0552580164077874
7	69360192	69373312	2	neutral	AA	54.5678	somatic	0	0.311115564744675	0.5390356560787
7	69633088	69640960	2	neutral	AA	100	somatic	0	0.64788324383408	0.48045553117109
7	74295936	74309056	2	neutral	AA	36.3798	somatic	0	0.197666292683141	0.535382341001512
7	78245056	78258176	2	neutral	AA	100	germline	1	0.383642491935477	0.164892346854762
7	92131264	92160128	2	neutral	AA	54.5678	germline	1	0.0678229116431969	0.0770136386112237
7	93026048	93039168	2	neutral	AA	100	somatic	0	0.825714075454428	0.564228104796333
7	96316544	96321792	2	neutral	AA	100	somatic	0	0.611746384406398	0.949059453687061
7	100947904	100955776	3	gain	AAB	0.677024	germline	1	0.00275008764639716	0.00511667103401092
7	100955776	100961024	8	gain	AAAAABBB	1.32386	germline	1	0.0143079007929968	0.0366340980912723
7	100961024	100976768	3	gain	AAB	0.31913	germline	1	2.22224840588867e-05	1.24242968831956e-05
7	101257536	101283776	2	neutral	AA	1.43102	somatic	0	0.0291539122803175	0.0578470000621121
7	105232896	105293248	2	neutral	AA	54.5678	somatic	0	0.943105505994381	0.881091542418388
7	106523904	107641728	2	neutral	AA	9.03575	germline	1	1.7051544390778e-05	1.79600834306903e-05
7	109801280	109814400	1	loss	A	-1	germline	1	0.000285450347449751	0.000207032573924626
7	111748288	111758784	2	neutral	AA	100	somatic	0	0.591292406129204	0.437494308066726
7	113771392	113797632	2	neutral	AA	100	somatic	0	0.476600744949933	0.420939523513657
7	126101568	126127808	2	neutral	AA	100	somatic	0	0.211006756338672	0.590910318961694
7	128274240	128279488	2	neutral	AA	100	somatic	0	0.57434181317867	0.783780289169703
7	129583616	129612480	2	neutral	AA	27.3295	somatic	0	0.0211513236258569	0.00716883084856557
7	136736640	136807488	2	neutral	AA	54.8007	somatic	0	0.629715654020476	0.788829367010702
7	143847680	143850304	4	gain	-	-1	germline	1	0.0832811807848663	0.270065813486476
7	152394048	152401920	2	neutral	AA	29.8323	somatic	0	0.555871186766485	0.860717869596861
7	152401920	152407168	9	gain	AAAAAAABB	1.20743	germline	1	0.014307091771139	0.0366328799109668
7	152407168	152409792	3	gain	AAB	5.00089	germline	1	0.0832946425503219	0.270089191678776
7	152415040	152496384	2	neutral	AA	10.3809	somatic	0	1.68262293485976e-05	0.000196980962167248
7	154335808	154380416	2	neutral	AA	100	somatic	0	0.551237261153642	0.614061286571096
7	157429504	157489856	2	neutral	AA	9.20478	somatic	0	0.133863646444321	0.218134207556823
7	158148480	158151104	5	gain	AAABB	13.783	germline	1	0.0832773348898858	0.270059134274271
7	158594560	158597184	4	gain	AABB	21.429	germline	1	0.0832786168388937	0.270061360664942
7	158602432	158670656	2	neutral	AA	15.7928	somatic	0	0.0884149991357726	0.0843757424185532
7	159250560	159318784	2	neutral	AA	100	somatic	0	0.0893088608526163	0.314423809836782
8	5137792	5143040	2	neutral	AA	100	somatic	0	0.0792363967857126	0.11849998002413
8	6969344	7076928	3	gain	AAB	0.60291	somatic	0	1.03208660956765e-13	0
8	13332544	13364032	2	neutral	AA	27.469	somatic	0	0.130085773697287	0.117253514670387
8	16339648	16350144	1	loss	A	-1	germline	1	0.00393605188090608	0.0140771887016774
8	16400000	16413120	1	loss	A	-1	germline	1	0.0372489424677923	0.0279497277429411
8	25114304	25132672	1	loss	A	-1	germline	1	1.20911883295276e-05	7.32387252755373e-06
8	26840896	27000960	2	neutral	AA	71.1653	somatic	0	0.0325573535832039	0.141156634521681
8	28554368	28577984	2	neutral	AA	100	somatic	0	0.121266401326781	0.194725539532279
8	41380480	41427712	2	neutral	AA	100	somatic	0	0.00277596867567601	0.00673215981101383
8	43235648	43238272	5	gain	AAABB	4.79193	somatic	0	0.0832779758623916	0.270060247467932
8	43238272	43240896	10	gain	AAAAAAABBB	9.0166	somatic	0	0.0832683616944176	0.270043549914718
8	43240896	43243520	5	gain	AAABB	1.76878	somatic	0	0.0832766939213765	0.27005802108396
8	43655488	43658112	8	gain	AAAABBBB	24.283	germline	1	0.0832702844560801	0.270046889365071
8	43658112	43660736	5	gain	AAABB	100	germline	1	0.0832773348898858	0.270059134274271
8	50118400	50126272	1	loss	A	-1	germline	1	0.00616627248675247	0.00920497214612193
8	57066752	57082496	2	neutral	AA	22.4788	somatic	0	0.570507127268995	0.614314656428227
8	69368064	69431040	2	neutral	AA	15.5914	somatic	0	0.490057154909116	0.170684905166715
8	73713408	73765888	2	neutral	AA	75.6009	somatic	0	0.0390988385547861	0.084606696352328
8	86434560	86578880	2	neutral	AA	42.8025	somatic	0	0.461795625213157	0.446246932067129
8	88979840	89040192	2	neutral	AA	100	somatic	0	0.895712592854351	0.524031861291727
8	92086656	92170624	2	neutral	AA	55.5476	somatic	0	0.248887424300792	0.0860258939075252
8	95862592	95867840	1	loss	A	-1	germline	1	0.0273640286882957	0.0562171260413663
8	101769216	101821696	2	neutral	AA	100	somatic	0	0.421900086643474	0.547857816820294
8	102981504	102984128	1	loss	A	-1	somatic	0	0.0834736590467706	0.270399927847649
8	108111424	108124544	1	loss	A	-1	germline	1	0.000277665437464266	0.000251944942270432
8	124674112	124718720	2	neutral	AA	100	germline	1	0.0847306114474613	0.136712411066357
8	130837888	130840512	0	loss	-	-1	germline	1	0.0832792578193921	0.270062473865297
8	136148864	136151488	1	loss	A	-1	somatic	0	0.0854687139322379	0.273844242957356
8	141737984	141764224	2	neutral	AA	35.3902	somatic	0	0.0583878759078535	0.0964381887855559
8	143619392	143632512	1	loss	A	-1	germline	1	0.000160656407744828	0.000173793385234711
8	144123200	144128448	3	gain	AAB	8.35514	germline	1	0.0143151838058966	0.0366505469947083
9	5305728	5337216	1	loss	A	-1	germline	1	4.26449012308803e-06	1.15471759443153e-06
9	6699072	6712192	1	loss	A	-1	germline	1	0.000284973795784899	0.000270684060139637
9	15814848	15817472	0	loss	-	-1	germline	1	0.0832677207818558	0.270042436771296
9	22495552	22498176	1	loss	A	-1	germline	1	0.0834897151516639	0.270427784320154
9	29092288	29097536	1	loss	A	-1	germline	1	0.0184002321686062	0.0457079002496908
9	40910784	40929152	5	gain	-	-1	germline	1	0.000532288572422004	0.000671181877996307
9	61671872	61674496	2	neutral	AA	6.0433	somatic	0	0.645236573781733	0.817986253824396
9	76460736	76465984	2	neutral	AA	100	somatic	0	0.889559808151781	0.91538540302523
9	88518016	88541632	2	neutral	AA	21.8271	somatic	0	0.93079658576953	0.629952672614543
9	90409920	90428288	2	neutral	AA	73.3615	somatic	0	0.337173878290606	0.437447710184719
9	98546944	98549568	0	loss	-	-1	germline	1	0.0832664389687204	0.270040210494507
9	98772608	98811968	2	neutral	AA	100	somatic	0	0.343995517318373	0.469909219770891
9	103012992	103015616	0	loss	-	-1	germline	1	0.0832683616944176	0.270043549914714
9	105888896	105899392	2	neutral	AA	100	somatic	0	0.717424358686534	0.967617571249604
9	128077440	128085312	2	neutral	AA	36.4139	somatic	0	0.157934376875184	0.280379045035016
9	129423552	129441920	3	gain	AAB	0.27432	germline	1	5.28488127493247e-06	2.40127123207756e-06
9	136886208	136904576	2	neutral	AA	34.4331	somatic	0	0.0374617735365806	0.12775874546746
9	137358528	137361152	0	loss	-	-1	germline	1	0.0832677207818558	0.270042436771296
10	1865664	2049344	2	neutral	AA	10.8389	somatic	0	0.00734319375965876	0.029289401213017
10	8184256	8231488	2	neutral	AA	62.1894	somatic	0	0.364330706219085	0.382249073208895
10	18147584	18234176	2	neutral	AA	100	somatic	0	0.283669736719601	0.44069823946327
10	18454592	18627776	2	neutral	AA	11.2917	somatic	0	0.000109003208933944	6.42933055228223e-06
10	25363584	25442304	2	neutral	AA	100	somatic	0	0.645020591921117	0.711238430241574
10	26557504	26659840	2	neutral	AA	1.1389	somatic	0	0.125771600084413	0.186218660903315
10	26937984	26940608	4	gain	AAAB	8.24198	somatic	0	0.0832824627818314	0.27006803991734
10	38483584	38525568	2	neutral	AA	0.489087	somatic	0	0.299615150260103	0.456434346902654
10	38525568	38528192	8	gain	AAAAAAAB	6.29855	germline	1	0.0832702844560801	0.270046889365071
10	38575424	38583296	3	gain	AAA	1.66338	germline	1	0.0696408152949721	0.139035698417297
10	38583296	38835200	2	neutral	AA	1.09304	somatic	0	0.200805702750241	0.224048953009478
10	41834432	41842304	2	neutral	AA	15.5009	germline	1	0.544082259574763	0.679612995800623
10	41858048	41889536	30	gain	AAAAAAAAAAAAAAAAAAAABBBBBBBBBB	4.22037	somatic	0	0.000107527516020901	9.08140142897862e-05
10	46515648	46560256	4	gain	AABB	0.403857	germline	1	1.97548904750164e-11	1.87627691161651e-13
10	52096896	52152000	2	neutral	AA	54.5704	somatic	0	0.0245249353855659	0.0333972258280134
10	67725440	67728064	0	loss	-	-1	germline	1	0.0832728481942434	0.270051342012429
10	67751680	67764800	2	neutral	AA	55.0709	somatic	0	0.805592827510003	0.966225914089793
10	76494848	76502720	1	loss	A	-1	germline	1	0.0203912768839594	0.0554309879101408
10	86387328	86468672	2	neutral	AA	100	somatic	0	0.000977991274284576	0.00117597932648406
10	87709824	87730816	2	neutral	AA	37.0458	somatic	0	0.118475335271657	0.376579781406767
10	99614912	99667392	2	neutral	AA	28.5886	somatic	0	0.580489009861556	0.358253546353514
10	118840960	118940672	2	neutral	AA	100	somatic	0	0.661752211811071	0.262671681901721
10	122585408	122593280	1	loss	A	-1	germline	1	0.00646438350761939	0.0092029069087457
10	128463168	128465792	6	gain	AAABBB	68.5073	germline	1	0.0832747710398266	0.270054681533124
10	130892992	130932352	2	neutral	AA	54.6581	somatic	0	0.126161190988072	0.137268897030806
10	131622464	131625088	0	loss	-	-1	germline	1	0.0832754119963469	0.270055794713382
11	1939136	2133312	2	neutral	AA	8.10743	germline	1	7.38050272469152e-06	0.000837216343672398
11	2340608	2374720	2	neutral	AA	44.2825	somatic	0	0.434241451907136	0.468648195901726
11	5796416	5885632	2	neutral	AA	32.4425	somatic	0	0.320239263678808	0.577233827638225
11	21259648	21264896	2	neutral	AA	54.5678	germline	1	0.894596823854496	0.712945285892419
11	28984704	28992576	1	loss	A	-1	germline	1	0.0164717663893124	0.0431842402574769
11	37234560	37271296	2	neutral	AA	54.5681	somatic	0	0.220013272027627	0.109144441763065
11	47368448	47384192	2	neutral	AA	17.555	somatic	0	0.240098513643082	0.165641095560555
11	47622976	47641344	2	neutral	AA	14.8207	somatic	0	0.00441540219972869	0.00251510416878642
11	54922944	54928192	1	loss	A	-1	germline	1	0.016982462121295	0.0438470528637102
11	54930816	54938688	4	gain	AABB	24.1792	germline	1	0.0027020167283825	0.0049618025740984
11	55187968	55206336	1	loss	A	-1	germline	1	6.38764478031304e-05	4.45064768836989e-05
11	55342784	55355904	2	neutral	AA	0.629941	germline	1	0.0666268104284465	0.362478834391312
11	57447232	58040256	2	neutral	AA	58.0522	somatic	0	5.51230855632097e-09	4.14969725248682e-10
11	60443840	60467456	2	neutral	AA	36.3817	somatic	0	0.0174370286112468	0.0236561310953889
11	61141824	61147072	2	neutral	AA	100	somatic	0	0.895745495652829	0.870178383055569
11	61889664	61934272	2	neutral	AA	36.1837	somatic	0	0.691161734855448	0.573079239020858
11	62682112	62684736	1	loss	A	-1	somatic	0	0.124947081152199	0.336259881865033
11	62684736	62700480	2	neutral	AA	100	germline	1	0.0331472033572558	0.0707184052338805
11	68336832	68365696	2	neutral	AA	35.0876	germline	1	0.226956506064987	0.286740689372441
11	68643840	68685824	2	neutral	AA	8.77744	somatic	0	0.253302897349644	0.350467872654282
11	69551744	69559616	2	neutral	AA	31.0939	somatic	0	0.964316877642903	0.807596568344626
11	71357056	71388544	2	neutral	AA	7.5986	germline	1	0.199481903670148	0.147659662301266
11	71559104	72133760	2	neutral	AA	3.19616	somatic	0	0.000124334274157167	2.19182285297048e-05
11	72863232	72868480	2	neutral	AA	100	somatic	0	0.275992297613912	0.277340669398151
11	74466496	74516352	2	neutral	AA	17.2888	somatic	0	0.482588477800482	0.45606732718353
11	76849088	76972416	2	neutral	AA	19.7613	somatic	0	2.01960033871558e-05	5.58197988846931e-05
11	79992640	80005760	2	neutral	AA	100	somatic	0	0.664496793283642	0.712899300233954
11	91184000	91260096	2	neutral	AA	82.7179	somatic	0	0.437617338780542	0.494970975724755
11	92286080	92309696	2	neutral	AA	54.8482	somatic	0	0.254275313693416	0.706909608148531
11	98499712	98507584	2	neutral	AA	100	somatic	0	0.802548171074191	0.659969532596181
11	101065984	101220800	2	neutral	AA	22.3209	somatic	0	0.967758161052489	0.628168032867766
11	104395840	104403712	1	loss	A	-1	germline	1	0.0158304302451319	0.041126027529694
11	113160000	113170496	2	neutral	AA	36.4357	somatic	0	0.21599729401937	0.230221288364243
11	118053760	118074752	2	neutral	AA	100	somatic	0	0.634853802131196	0.94399633694209
11	119630784	119638656	2	neutral	AA	100	somatic	0	0.161207201596868	0.437702782792679
11	120160832	120176576	2	neutral	AA	100	somatic	0	0.0435028289907002	0.0908954211781428
11	125665984	125742080	2	neutral	AA	100	somatic	0	0.231852850035188	0.275158571197671
11	130418048	130431168	2	neutral	AA	100	somatic	0	0.144464952942656	0.198142736667608
11	131748416	131819264	1	loss	A	-1	germline	1	1.95307176966255e-16	0
11	132349312	132354560	2	neutral	AA	100	somatic	0	0.634933943873486	0.683247026359165
12	758336	766208	1	loss	A	-1	germline	1	0.00522695539451355	0.00924058190970301
12	2254016	2256640	5	gain	AAABB	13.4537	germline	1	0.0832766939213765	0.27005802108396
12	6127040	6140160	1	loss	A	-1	germline	1	0.000714511112759442	0.000925065597566443
12	8863872	8866496	1	loss	A	-1	somatic	0	0.0860683706009748	0.274873470121639
12	10577344	10698048	2	neutral	AA	64.1025	somatic	0	0.00482071919074684	0.0071953996023103
12	16266176	16268800	1	loss	A	-1	somatic	0	0.0856423213813024	0.274142362588458
12	18095104	18100352	1	loss	A	-1	germline	1	0.0279185715633607	0.0557480712936176
12	29819136	29987072	2	neutral	AA	100	somatic	0	0.0929881871392314	0.0389867576647257
12	33235584	33240832	1	loss	A	-1	germline	1	0.0234665939923582	0.0509420783531499
12	34676160	34691904	2	neutral	AA	4.12225	germline	1	0.030948991570561	0.021127819081232
12	34691904	34697152	0	loss	-	-1	germline	1	0.0143160944124046	0.0366612117721229
12	37596672	37601920	1	loss	A	-1	germline	1	0.0144525511589143	0.0370647979958866
12	37601920	37615040	2	neutral	AA	35.0754	somatic	0	0.0957387813436872	0.119691093972915
12	37615040	37625536	1	loss	A	-1	germline	1	0.00295949717534286	0.00558129660710549
12	37625536	37754112	2	neutral	AA	9.6333	germline	1	5.67045961118688e-07	3.1170457892582e-06
12	39711616	39714240	0	loss	-	-1	germline	1	0.0832850268237199	0.270072492819258
12	45508032	45510656	1	loss	A	-1	germline	1	0.0833786581237402	0.270235060417534
12	50344064	50401792	2	neutral	AA	18.1587	somatic	0	1.43068890644891e-05	3.08089135525602e-05
12	59541184	59554304	1	loss	A	-1	germline	1	0.000408582770042133	0.000294223412557582
12	60126336	60131584	1	loss	A	-1	germline	1	0.0199524769404133	0.0540614474651859
12	70478016	70483264	1	loss	A	-1	germline	1	0.0242546530926262	0.0503969826294098
12	79761728	79769600	3	gain	AAA	28.9567	germline	1	0.00270797754140365	0.0049762376259056
12	83049600	83073216	2	neutral	AA	100	somatic	0	0.809011108194628	0.3274195615747
12	86030464	86038336	1	loss	A	-1	germline	1	0.00653194860341559	0.00997695015986355
12	87350336	87505152	2	neutral	AA	100	somatic	0	0.0575472367155874	0.0449116848144844
12	88701696	88704320	1	loss	A	-1	somatic	0	0.0835816041499947	0.270587163586133
12	92485504	92532736	2	neutral	AA	5.50893	somatic	0	0.0828795341170005	0.313273791624281
12	104975744	104980992	1	loss	A	-1	somatic	0	0.0216380903918998	0.0566517738093604
12	119625536	119643904	2	neutral	AA	100	somatic	0	0.487489860087503	0.783391907466716
13	22017984	22023232	1	loss	A	-1	germline	1	0.0197135293161458	0.0533072605714656
13	27864256	27872128	2	neutral	AA	100	somatic	0	0.60838918467456	0.464013448839863
13	29504256	29509504	2	neutral	AA	49.1366	somatic	0	0.0430597333116594	0.111667990616067
13	33833856	33878464	2	neutral	AA	54.5781	somatic	0	0.706438167702414	0.634464814679335
13	35736256	35749376	2	neutral	AA	100	somatic	0	0.879443611340913	0.451287882990586
13	35990784	36001280	2	neutral	AA	100	somatic	0	0.899322799436096	0.628918038240702
13	37496960	37510080	1	loss	A	-1	germline	1	0.00026701273008838	0.00026482966624608
13	40811072	40876672	2	neutral	AA	38.7419	somatic	0	0.145386655764741	0.107539358385968
13	45421440	45426688	1	loss	A	-1	somatic	0	0.0210960827573971	0.0576406415083555
13	47518016	47528512	2	neutral	AA	100	somatic	0	0.664290265581646	0.968221865905325
13	50493632	50501504	1	loss	A	-1	germline	1	0.00605841915781796	0.00949482250444156
13	63025856	63028480	2	neutral	AA	54.6195	somatic	0	0.196310266511249	0.431083289357536
13	63028480	63044224	3	gain	AAB	0.676692	germline	1	0.000107788585675083	9.10237501486888e-05
13	63059968	63065216	3	gain	AAB	1.58872	germline	1	0.0143140709117727	0.0366468911245029
13	63065216	63067840	5	gain	AAABB	0.742671	germline	1	0.0832760529568635	0.270056907896999
13	63503424	63534912	2	neutral	AA	36.3786	somatic	0	0.0443121468017327	0.0252948635933693
13	71902848	71908096	1	loss	A	-1	germline	1	0.0201081772979643	0.0545557001078956
13	71918592	71999936	2	neutral	AA	100	somatic	0	0.0689318168440603	0.23276165611574
13	72729408	72886848	2	neutral	AA	93.3662	somatic	0	0.106231895572229	0.145417399817974
13	80105472	80113344	1	loss	A	-1	germline	1	0.00579957478609925	0.00950354710726253
13	80239296	80247168	2	neutral	AA	54.5678	somatic	0	0.291971232319629	0.450915121549831
13	84705344	84707968	1	loss	A	-1	somatic	0	0.0908124336226133	0.282907781055397
13	88557376	88615104	2	neutral	AA	100	somatic	0	0.935180121309959	0.538015267684113
13	88958848	88990336	2	neutral	AA	100	somatic	0	0.336802013354464	0.718304297505994
13	90210496	90213120	1	loss	A	-1	germline	1	0.0832933604014842	0.270086965120626
13	95928192	96111872	2	neutral	AA	35.6819	somatic	0	0.000752091577222558	0.00398696139054755
13	102692864	102700736	2	neutral	AA	36.3786	somatic	0	0.594155903172254	0.982349841798785
13	109021952	109024576	1	loss	A	-1	germline	1	0.0833613363234862	0.270204991165349
13	109216128	109218752	1	loss	A	-1	somatic	0	0.0833446588263949	0.270176037897151
13	114154496	114157120	1	loss	A	-1	germline	1	0.0857426848257756	0.274314591827478
14	16092992	16095616	9	gain	-	-1	somatic	0	0.0832696435315297	0.270045776211604
14	26728064	26733312	2	neutral	AA	100	somatic	0	0.976079394157473	0.859306097118397
14	33177856	33183104	2	neutral	AA	100	somatic	0	0.212280605026041	0.336054758832536
14	34348160	34350784	0	loss	-	-1	germline	1	0.0832747710398266	0.27005468153312
14	35135360	35145856	1	loss	A	-1	germline	1	0.00120109368809937	0.00159789596572435
14	37300160	37302784	0	loss	-	-1	germline	1	0.0832850268237199	0.270072492819258
14	41141696	41202048	1	loss	A	-1	germline	1	2.44876499375075e-13	6.66133814775094e-16
14	41482816	41490688	2	neutral	AA	100	somatic	0	0.76752416653344	0.619775832409363
14	45628736	45812416	2	neutral	AA	79.854	somatic	0	0.843691114866151	0.71832729476734
14	47237248	47250368	1	loss	A	-1	germline	1	0.00115607009886781	0.001604078197329
14	48467904	48530880	2	neutral	AA	100	somatic	0	0.524025776386537	0.249590812931321
14	59142336	59370624	2	neutral	AA	44.579	somatic	0	0.00820766947709027	0.0520120841668694
14	60771840	60826944	2	neutral	AA	100	somatic	0	0.263478151680832	0.248236428179966
14	60947648	60952896	2	neutral	AA	100	somatic	0	0.248645195892349	0.502849751167319
14	61732224	61737472	2	neutral	AA	100	somatic	0	0.535823765647657	0.676466295542353
14	62616512	62655872	2	neutral	AA	55.2858	somatic	0	0.406855255397785	0.136511150165389
14	66017216	66048704	2	neutral	AA	54.5686	somatic	0	0.564313280580516	0.789274184715533
14	71829376	71863488	2	neutral	AA	100	somatic	0	0.199212393980363	0.10815893312259
14	71934336	72010432	2	neutral	AA	100	somatic	0	0.292442694550163	0.501705748318442
14	72579840	72711040	2	neutral	AA	100	somatic	0	0.882658803254753	0.675264507888289
14	72800256	72816000	2	neutral	AA	36.5293	somatic	0	0.137852449211202	0.201433041683109
14	72816000	72863232	2	neutral	AA	36.3846	somatic	0	0.035943766744008	0.0238324602367075
14	74450752	74484864	2	neutral	AA	54.5487	somatic	0	0.0942206447621076	0.206591812549366
14	80365248	80375744	2	neutral	AA	100	somatic	0	0.987544973398426	0.777726340747578
14	82705856	82747840	2	neutral	AA	30.8926	germline	1	0.62245328093712	0.283819423448518
14	83283136	83293632	2	neutral	AA	54.5678	germline	1	0.678891683462733	0.797558983686598
14	89856256	90039936	2	neutral	AA	35.776	somatic	0	0.00254022953956192	0.0225086637800674
14	95610688	95618560	2	neutral	AA	100	germline	1	0.287577097358649	0.219509049676587
14	99927168	99929792	7	gain	AAAABBB	9.41473	germline	1	0.0832722072537082	0.270050228845568
14	101624896	101659008	2	neutral	AA	21.2736	germline	1	0.545481774725841	0.135023064407479
15	0	17079616	6	gain	AAAABB	-1	somatic	0	NA	NA
15	17079616	17082240	9	gain	-	-1	germline	1	0.0832696435315297	0.270045776211604
15	17082240	20338624	6	gain	AAAABB	-1	somatic	0	0.758259650415572	0.736370749447351
15	20338624	20343872	14	gain	AAAAAAAAABBBBB	69.3185	germline	1	0.0143068895219798	0.0366325753714282
15	20343872	20669248	6	gain	AAAABB	4.32976	germline	1	2.00908653453038e-13	4.44089209850063e-16
15	23644864	23655360	2	neutral	AA	100	germline	1	0.222734021866419	0.536381886862374
15	26581120	26588992	2	neutral	AA	54.5678	somatic	0	0.282807490991395	0.174357627750256
15	44138304	44143552	2	neutral	AA	100	somatic	0	0.41716541287842	0.730050289023177
15	48368192	48530880	2	neutral	AA	100	somatic	0	1.01102371743902e-09	2.55428783124678e-07
15	50220736	50228608	2	neutral	AA	54.5678	somatic	0	0.409587218021085	0.639610470867706
15	60826944	60837440	2	neutral	AA	100	somatic	0	0.592695018562238	0.615072478879804
15	69381184	69410048	2	neutral	AA	82.5717	germline	1	0.796258185911045	0.59120496681082
15	72857984	73015424	2	neutral	AA	62.2897	somatic	0	0.107211641433859	0.173254674526269
15	76591936	76594560	0	loss	-	-1	germline	1	0.0832664389687204	0.270040210494507
15	79184448	79223808	2	neutral	AA	36.4144	germline	1	0.019075068940359	0.0379822763890961
15	82797696	82816064	2	neutral	AA	54.5678	somatic	0	0.0125998873697603	0.0276976372476205
15	88229376	88237248	2	neutral	AA	100	somatic	0	0.994606402499223	0.78674311408286
15	90793024	90821888	2	neutral	AA	27.8506	somatic	0	0.0218540763283064	0.0567148117665539
15	92684928	92698048	2	neutral	AA	100	somatic	0	0.311821706349009	0.174207610321847
15	95715648	95804864	2	neutral	AA	18.2914	somatic	0	0.34947484541746	0.672168932685517
15	96707520	96718016	2	neutral	AA	100	somatic	0	0.096602058415206	0.235912569022522
15	97982784	98003776	2	neutral	AA	100	somatic	0	0.457328227428851	0.312335158238662
16	873792	879040	2	neutral	AA	100	somatic	0	0.0619917070119975	0.100325144719518
16	1023360	1025984	4	gain	AABB	22.1138	germline	1	0.0832824627818314	0.27006803991734
16	19934528	19955520	1	loss	A	-1	germline	1	3.91047108712574e-06	8.92915833938801e-07
16	21558784	21582400	4	gain	AABB	6.73299	germline	1	2.03845652846995e-07	3.0517558591292e-08
16	22613632	22700224	4	gain	AAAB	2.86363	somatic	0	5.26754400751935e-22	0
16	25329472	25332096	0	loss	-	-1	germline	1	0.0832677207818558	0.270042436771296
16	29687936	29808640	2	neutral	AA	86.2826	somatic	0	1.14814258663668e-10	1.27274080163886e-10
16	34062144	34064768	22	gain	AAAAAAAAAAAAAAABBBBBBB	29.0007	germline	1	0.0832664389687204	0.270040210494511
16	34075264	34083136	2	neutral	AA	27.2847	germline	1	0.856526888688111	0.986129162161427
16	34083136	34085760	10	gain	AAAAAABBBB	100	germline	1	0.0832683616944176	0.270043549914718
16	34085760	34096256	2	neutral	AA	100	somatic	0	0.056706008648285	0.0470376856316962
16	34096256	34098880	9	gain	AAAAAABBB	2.26911	germline	1	0.0832696435315297	0.270045776211604
16	34098880	34161856	2	neutral	AA	5.24974	somatic	0	0.396145788939214	0.670879833667213
16	34161856	34214336	3	gain	AAB	0.415896	somatic	0	0.00488930522573239	0.020736939255922
16	34901824	34904448	4	gain	-	-1	germline	1	0.0832818217813506	0.270066926700233
16	34904448	34959552	2	neutral	AA	0.767173	germline	1	0.0315807036135553	0.0494130469493147
16	35993408	36090496	2	neutral	AA	3.33862	germline	1	5.43334810825477e-05	0.000200166984941519
16	36121984	36127232	5	gain	-	-1	germline	1	0.0143103281007075	0.0366377528448495
16	78336896	78350016	1	loss	A	-1	germline	1	0.000328988577409905	0.000261078879554733
16	88979840	89076928	2	neutral	AA	14.0561	somatic	0	0.015017427542664	0.102828952798744
17	1251648	1267392	2	neutral	AA	54.5678	somatic	0	0.00201595504350139	0.00324056311814669
17	3665728	3681472	2	neutral	AA	27.2883	somatic	0	0.0516290412968142	0.0286697365191043
17	4668096	4704832	2	neutral	AA	43.854	somatic	0	0.000124934176969606	0.00156823353098379
17	10742656	10747904	2	neutral	AA	100	somatic	0	0.174068142952055	0.418125320666834
17	12839232	12881216	2	neutral	AA	36.512	germline	1	0.256792279217071	0.338047632896468
17	15140480	15156224	1	loss	A	-1	germline	1	8.11383815151859e-05	4.63053826195159e-05
17	16817216	16819840	4	gain	AAAB	100	germline	1	0.0832786168388937	0.270061360664942
17	17903552	17956032	2	neutral	AA	54.568	somatic	0	0.00424473666277708	0.00601399403793923
17	19905664	19945024	2	neutral	AA	100	somatic	0	0.000726281073191003	0.00129323642908685
17	21291136	21304256	4	gain	AABB	0.254183	germline	1	0.000107602147978941	9.08536588012376e-05
17	21884160	21968128	1	loss	A	-1	germline	1	4.64451107860128e-19	0
17	21968128	21991744	10	gain	-	-1	somatic	0	0.000532131884174533	0.000671092607651524
17	22122944	22159680	6	gain	AAAABB	0.182334	germline	1	4.24490964958251e-10	1.02333697071799e-11
17	26864512	26867136	6	gain	-	-1	germline	1	0.0832747710398266	0.270054681533124
17	26877632	26880256	4	gain	-	-1	germline	1	0.0832786168388937	0.270061360664942
17	26937984	26940608	15	gain	AAAAAAAAAABBBBB	4.50186	germline	1	0.0832677207818558	0.2700424367713
17	32519232	32540224	2	neutral	AA	54.568	somatic	0	0.391255711231847	0.765286713806484
17	35510592	35599808	2	neutral	AA	100	somatic	0	0.334312406503025	0.722420129732821
17	55379520	55387392	2	neutral	AA	54.6581	somatic	0	0.644942676361484	0.512047896667849
17	62684736	62703104	2	neutral	AA	54.5696	somatic	0	0.0876596748853124	0.0590437736631459
17	65069952	65122432	2	neutral	AA	36.5705	somatic	0	0.00360800294973006	0.0096099443353711
17	66793920	66796544	2	neutral	AA	100	somatic	0	0.54899017339367	0.755622353573436
17	66799168	66801792	5	gain	AAAAA	11.6094	germline	1	0.0832779758623916	0.270060247467932
17	69103040	69205376	2	neutral	AA	27.546	somatic	0	0.0300510782734826	0.0896190815066497
17	76424000	76429248	2	neutral	AA	100	somatic	0	0.361060439020827	0.762752255453526
17	76822848	76828096	2	neutral	AA	54.5678	somatic	0	0.581916043215197	0.852127190223832
17	77809472	77843584	2	neutral	AA	54.5686	somatic	0	0.792215827344212	0.474796189412984
17	78218816	78231936	2	neutral	AA	36.3786	somatic	0	0.449692705348166	0.380570915734676
17	78578304	78601920	3	gain	AAB	1.76505	germline	1	2.06689304175533e-07	3.23016586811775e-08
17	81228544	81233792	2	neutral	AA	54.5694	germline	1	0.800807652993142	0.751178666613153
17	82175808	82356864	2	neutral	AA	100	somatic	0	0.149619143995724	0.273999530477446
18	5305728	5308352	1	loss	A	-1	germline	1	0.0835816041499947	0.270587163586133
18	9672064	9732416	2	neutral	AA	36.3791	somatic	0	0.613246255988317	0.691948378934203
18	23162048	23211904	2	neutral	AA	54.579	somatic	0	0.265083244988942	0.737160498093927
18	27460160	27544128	2	neutral	AA	54.5678	somatic	0	0.0289259785056534	0.111252770090351
18	38541312	38743360	2	neutral	AA	48.3002	somatic	0	0.0179294361129664	0.0371872064224421
18	41283392	41288640	0	loss	-	-1	germline	1	0.0143726519010639	0.0368312998781649
18	45893760	45904256	2	neutral	AA	100	somatic	0	0.585331534036222	0.616234076638418
18	50168256	50173504	1	loss	A	-1	germline	1	0.0193024327265229	0.0520182268099635
18	51165376	51186368	2	neutral	AA	54.5679	germline	1	0.501929401236228	0.410372183151208
18	55584192	55657664	2	neutral	AA	36.3786	somatic	0	0.380999257712031	0.22496892667051
18	56639040	56746624	2	neutral	AA	59.9699	somatic	0	0.513788170637377	0.686733278450424
18	57022144	57024768	4	gain	AABB	59.747	germline	1	0.0832888730064501	0.270079172272631
18	57279296	57281920	0	loss	-	-1	germline	1	0.0832715663171693	0.270049115682049
18	57386880	57468224	2	neutral	AA	54.5679	somatic	0	0.213072024103984	0.0489886464650225
18	61829312	61957888	2	neutral	AA	55.8585	somatic	0	0.0177057976892291	0.0839193014729761
18	62495808	62506304	2	neutral	AA	54.5678	somatic	0	0.0877355450226964	0.0651982374209603
18	66056576	66064448	1	loss	A	-1	germline	1	0.00426549362333101	0.0070537041485742
18	67951104	67964224	2	neutral	AA	100	somatic	0	0.535511055117412	0.812344942329013
18	71677184	71692928	2	neutral	AA	100	somatic	0	0.969584921146942	0.798572153980913
18	74616064	74618688	3	gain	-	-1	somatic	0	0.0832920782686336	0.270084738575883
18	79200192	79202816	6	gain	AAABBB	100	germline	1	0.0832760529568635	0.270056907896999
18	79520320	79522944	1	loss	A	-1	germline	1	0.0833619778196606	0.270206104797809
19	2311744	2345856	2	neutral	AA	34.8833	somatic	0	0.0274853293772559	0.0281782231432048
19	6069312	6116544	2	neutral	AA	8.80927	somatic	0	0.00248920164223096	0.00193419382963533
19	7449536	7452160	7	gain	AAAAAAB	25.5397	germline	1	0.0832728481942434	0.270051342012433
19	8882240	8918976	2	neutral	AA	2.27009	germline	1	0.168262286376189	0.364169813559395
19	8918976	8926848	1	loss	A	-1	somatic	0	0.011527703579123	0.0235806718427256
19	10548480	10572096	2	neutral	AA	36.3974	somatic	0	0.00916570004797833	0.0118264699077731
19	16142848	16229440	2	neutral	AA	42.7134	germline	1	3.28119729708596e-06	5.26119848482942e-05
19	20412096	20535424	1	loss	A	-1	germline	1	3.85744899791305e-26	0
19	21296384	21314752	2	neutral	AA	9.97964	somatic	0	0.0355719201564467	0.15043189353699
19	21501056	21587648	2	neutral	AA	0.258175	somatic	0	0.541820247330183	0.240487789141245
19	24277248	24321856	2	neutral	AA	21.8408	somatic	0	0.368433768236446	0.5120317947523
19	24329728	24405824	4	gain	AABB	0.241076	germline	1	1.03774930398733e-18	0
19	27244992	27336832	2	neutral	AA	1.50554	somatic	0	0.00029413277052189	0.000394513098509131
19	27336832	27347328	3	gain	AAB	0.867368	germline	1	0.00419902381026792	0.0222530356382727
19	27347328	27360448	5	gain	AAABB	0.482311	germline	1	0.000107578686955679	9.08385541918966e-05
19	27360448	27363072	8	gain	AAAAAABB	6.45681	germline	1	0.0832696435315297	0.270045776211604
19	27363072	27378816	5	gain	AAABB	0.388308	germline	1	0.00010758295223724	9.08442181408731e-05
19	27378816	27384064	4	gain	AAAB	2.77859	germline	1	0.0143121488198648	0.0366404941193802
19	27384064	27399808	5	gain	AAABB	0.309729	germline	1	2.21094612278426e-05	1.22985425194955e-05
19	27399808	27433920	2	neutral	AA	48.4333	somatic	0	0.000667839418060856	0.00187471828731833
19	28530752	28551744	2	neutral	AA	36.3901	germline	1	0.284821905232218	0.381425490628811
19	29512128	29514752	0	loss	-	-1	germline	1	0.0832728481942434	0.270051342012429
19	31750400	31755648	2	neutral	AA	27.3884	somatic	0	0.559382057084281	0.467844662963632
19	40779584	40892416	2	neutral	AA	7.29038	somatic	0	0.00040050415705157	0.00319976947978451
19	45014720	45025216	2	neutral	AA	54.5678	germline	1	0.00609652440696585	0.0152508900045736
19	48460032	48473152	2	neutral	AA	54.5678	germline	1	0.352342441812638	0.395013881221151
19	50763904	50774400	2	neutral	AA	100	somatic	0	0.0100175405316642	0.0121866453736927
19	51632448	51645568	1	loss	A	-1	germline	1	0.000196170598036652	0.00019009967198258
19	53015296	53049408	3	gain	AAB	2.13154	germline	1	1.99591854074662e-09	7.73048292046496e-11
20	60352	62976	7	gain	-	-1	germline	1	0.0832734891387748	0.270052455182647
20	65600	68224	3	gain	-	-1	germline	1	0.0833151591060881	0.270124818431261
20	7418048	7423296	1	loss	A	-1	somatic	0	0.0210154774101427	0.0492674825881098
20	21304256	21309504	1	loss	A	-1	germline	1	0.0184015567778776	0.0489942389752898
20	26316096	26323968	1	loss	A	-1	somatic	0	0.0206253821917415	0.0561584195413065
20	28780032	28787904	6	gain	-	-1	germline	1	0.014309013263944	0.036636839126549
20	28803648	28871872	7	gain	-	-1	germline	1	2.03609082624445e-07	3.04844689491546e-08
20	28942720	28945344	3	gain	-	-1	somatic	0	0.0833260601912024	0.270143746538622
20	28953216	28955840	4	gain	-	-1	somatic	0	0.0832786168388937	0.270061360664942
20	29262848	29265472	15	gain	-	-1	germline	1	0.0832677207818558	0.2700424367713
20	29265472	29315328	3	gain	-	-1	germline	1	7.11996884062173e-10	4.89307483420021e-11
20	29409792	29412416	4	gain	-	-1	germline	1	0.0832786168388937	0.270061360664942
20	29876864	29879488	9	gain	-	-1	somatic	0	0.0832683616944176	0.270043549914718
20	29889984	29895232	4	gain	-	-1	germline	1	0.0143107326873065	0.0366392757529903
20	30283584	30286208	5	gain	-	-1	germline	1	0.0832766939213765	0.27005802108396
20	31165248	31167872	4	gain	-	-1	somatic	0	0.0832888730064501	0.270079172272631
20	31183616	31188864	13	gain	-	-1	germline	1	0.0143069906462442	0.0366328799109668
20	31241344	31243968	40	gain	-	-1	germline	1	0.0832664389687204	0.270040210494511
20	37192576	37203072	2	neutral	AA	100	somatic	0	0.325226460713016	0.468247725463761
20	38462592	38465216	1	loss	A	-1	somatic	0	0.083318365187668	0.270130385421168
20	39827072	39861184	2	neutral	AA	36.4381	germline	1	0.0188550816851458	0.0103642432656508
20	43642368	43650240	1	loss	A	-1	germline	1	0.00541382809292878	0.00959367636192188
20	45452928	45529024	2	neutral	AA	46.5608	somatic	0	0.409318489483184	0.812213762327723
20	52422272	52430144	2	neutral	AA	100	somatic	0	0.578740706633293	0.894022843112187
20	54665792	54684160	2	neutral	AA	100	somatic	0	0.939832185737175	0.977814043029685
20	61821440	61863424	2	neutral	AA	74.6765	somatic	0	0.132468982168403	0.1308045011708
20	61866048	61871296	2	neutral	AA	30.4743	germline	1	0.115781423311202	0.332876419687127
20	63393216	63411584	2	neutral	AA	21.8271	somatic	0	0.337934467959789	0.370066747842438
21	10650816	10653440	4	gain	AAAB	31.7608	germline	1	0.0832786168388937	0.270061360664942
21	10653440	10661312	6	gain	AAAABB	8.19317	germline	1	0.00270074492104085	0.0049586480951036
21	10661312	10690176	4	gain	AAAB	1.21045	germline	1	4.32716404480902e-08	4.1277941065232e-09
21	10690176	10695424	25	gain	AAAAAAAAAAAAAAAAAAAAABBBB	100	germline	1	0.0143064850312276	0.0366319662989963
21	10695424	10703296	4	gain	AAAB	3.34837	germline	1	0.00270105821408606	0.00495895727645046
21	10703296	10721664	6	gain	AAAABB	4.88564	germline	1	4.5967064140293e-06	1.66424340997118e-06
21	10721664	10737408	4	gain	AAAB	4.67704	germline	1	2.21094612278426e-05	1.22960889832324e-05
21	10753152	10755776	11	gain	AAAAAAABBBB	2.23623	germline	1	0.0832683616944176	0.270043549914718
21	18451968	18475584	2	neutral	AA	100	somatic	0	0.481896358642607	0.727053378235225
21	20241536	20244160	2	neutral	AA	100	somatic	0	0.866244829827507	0.924222017681423
21	23537280	23550400	2	neutral	AA	22.4255	somatic	0	0.322175667643722	0.413660081365733
21	24492416	24534400	2	neutral	AA	54.5775	somatic	0	0.60245391193539	0.643671665073971
21	26586368	26633600	2	neutral	AA	72.3507	germline	1	0.135463525474776	0.0129334941842535
21	27785536	27814400	2	neutral	AA	55.5268	somatic	0	0.212515433530045	0.544811249580313
21	29097536	29129024	2	neutral	AA	15.6447	somatic	0	0.96085750039476	0.711780726279801
21	29706304	29795520	2	neutral	AA	17.2677	somatic	0	0.042504235522821	0.107091708662165
21	30231104	30238976	2	neutral	AA	100	somatic	0	0.990212097399808	0.643944690433312
21	31784512	31787136	3	gain	AAB	86.1089	somatic	0	0.0833004124179365	0.270099211356233
21	38911296	38916544	2	neutral	AA	38.4727	somatic	0	0.229436385419462	0.255397540956634
21	39813952	39845440	2	neutral	AA	100	germline	1	0.174346348159881	0.115056249272372
21	40149824	40160320	2	neutral	AA	54.8443	somatic	0	0.811194442679617	0.988508499230512
21	41083968	41091840	2	neutral	AA	27.284	somatic	0	0.725768789663853	0.878103271536715
21	41805568	41808192	3	gain	AAA	100	somatic	0	0.0832946425503219	0.270089191678776
21	41837056	41844928	2	neutral	AA	54.6067	somatic	0	0.80372008837619	0.942434248470958
21	42348736	42351360	2	neutral	AA	100	somatic	0	0.086085158426561	0.274901661257879
21	42986368	42988992	2	neutral	AA	100	somatic	0	0.290917694024342	0.536236893428089
21	43335360	43337984	3	gain	AAB	9.68723	somatic	0	0.0832946425503219	0.270089191678776
21	44280000	44282624	2	neutral	AA	100	somatic	0	0.162023347933696	0.387714410067804
21	44723456	44752320	2	neutral	AA	100	somatic	0	0.949712053775544	0.816637975254042
21	45379456	45395200	2	neutral	AA	41.2702	germline	1	0.0168714242181564	0.0267982504539089
21	45552640	45555264	1	loss	A	-1	somatic	0	0.0913512537932838	0.283809147065312
22	11626944	11629568	4	gain	AABB	40.79	germline	1	0.0832798988038871	0.27006358706901
22	17092736	17095360	2	neutral	AA	100	somatic	0	0.145593972119761	0.365592222711353
22	17874688	17877312	3	gain	AAB	7.39676	germline	1	0.0832927193330605	0.270085851846582
22	20595776	20601024	1	loss	A	-1	germline	1	0.0147380941960563	0.0379303952161637
22	20929024	20931648	2	neutral	AA	100	somatic	0	0.271217607394016	0.515768249359823
22	22319744	22340736	2	neutral	AA	100	germline	1	0.891275411010042	0.922043382351238
22	22713344	22781568	2	neutral	AA	54.579	somatic	0	0.134025335290924	0.401748633090254
22	23038720	23041344	2	neutral	AA	100	germline	1	0.234989281534904	0.476279324947784
22	24227392	24232640	2	neutral	AA	36.4028	germline	1	0.213576560341738	0.490807677025414
22	24563264	24565888	2	neutral	AA	100	somatic	0	0.511593301234623	0.72868827677434
22	29118528	29121152	4	gain	AAAA	53.7331	germline	1	0.0832863088686435	0.270074719290321
22	29868992	29874240	2	neutral	AA	54.5873	germline	1	0.135725926990945	0.289536401816125
22	29950336	30176000	2	neutral	AA	23.2143	somatic	0	0.000356782479038962	0.000333037116278412
22	30690304	30692928	2	neutral	AA	100	somatic	0	0.865848392074578	0.92406589945185
22	31380416	31385664	1	loss	A	-1	germline	1	0.0166771688295552	0.0429744644221809
22	32028544	32178112	2	neutral	AA	100	somatic	0	0.100213560714275	0.0793458462563261
22	32448384	32453632	2	neutral	AA	61.8081	somatic	0	0.243597641521251	0.310498826648454
22	34264192	34266816	2	neutral	AA	100	somatic	0	0.811380490255968	0.902646234891356
22	34366528	34392768	2	neutral	AA	100	somatic	0	0.613604773545995	0.32600895797222
22	35452864	35465984	2	neutral	AA	9.66811	somatic	0	0.620929129579853	0.839606253952715
22	35657536	35660160	2	neutral	AA	100	somatic	0	0.410365798547797	0.648025808606571
22	36342400	36402752	2	neutral	AA	54.5873	somatic	0	0.00699654331842043	0.0411248345993086
22	36746496	36749120	0	loss	-	-1	germline	1	0.0832747710398266	0.27005468153312
22	37685888	37688512	2	neutral	AA	100	somatic	0	0.401230274756727	0.640109438902797
22	38142464	38166080	2	neutral	AA	27.3259	somatic	0	0.100146253452458	0.226407020550106
22	38756480	38759104	2	neutral	AA	100	somatic	0	0.212271344846273	0.450148080769553
22	38864064	38866688	2	neutral	AA	100	somatic	0	0.124741856135058	0.335962608484324
22	39286528	39297024	2	neutral	AA	54.5704	somatic	0	0.0877368821664867	0.101732895900274
22	39583040	39590912	2	neutral	AA	32.4718	somatic	0	0.287936179705101	0.224129313990645
22	39661760	39688000	2	neutral	AA	27.3782	somatic	0	0.00712097223674005	0.0345632193208322
22	40677248	40679872	2	neutral	AA	100	somatic	0	0.190830592139547	0.424357692756747
22	44618496	44642112	2	neutral	AA	100	somatic	0	0.811771179801178	0.989294382402297
22	44899264	44901888	2	neutral	AA	54.568	somatic	0	0.192179407397158	0.426020683094059
22	45552640	45573632	2	neutral	AA	39.04	somatic	0	0.950579939239597	0.99703249737502
22	45904256	45909504	2	neutral	AA	36.3786	somatic	0	0.745099400558571	0.718216266197345
22	47916864	47935232	2	neutral	AA	54.5678	somatic	0	0.0337425765607222	0.147133839742377
22	49546368	49677568	2	neutral	AA	8.30436	somatic	0	0.00164831473091723	0.0148834360337291
22	49976704	49995072	2	neutral	AA	100	somatic	0	0.0171146606856456	0.00740538921720379
22	50315200	50317824	2	neutral	AA	36.3786	somatic	0	0.140123246075846	0.357997066293228
22	50336192	50341440	1	loss	A	-1	somatic	0	0.0299992716363022	0.05741542413233
22	50372928	50380800	2	neutral	AA	100	somatic	0	0.0117595597607553	0.0162811775128172
22	50417536	50420160	2	neutral	AA	100	somatic	0	0.674584650522225	0.835148862389053
22	50627456	50632704	2	neutral	AA	100	germline	1	0.153812402726652	0.239388838272632
22	50643200	50645824	4	gain	AAAB	29.1083	germline	1	0.0832818217813506	0.270066926700233
X	78268672	78271296	2	gain	-	-1	somatic	0	0.862961084789417	0.922990070648739
X	114805248	114807872	0	loss	-	-1	germline	1	0.0832677207818558	0.270042436771296
X	145340736	145343360	0	loss	-	-1	germline	1	0.0832664389687204	0.270040210494507
Y	3844160	3852032	2	gain	AB	0.687764	somatic	0	0.084984399903466	0.119654545738509
Y	10656064	10658688	6	gain	-	-1	germline	1	0.0832734891387748	0.270052455182647
Y	10661312	10758400	2	gain	-	-1	germline	1	0.213465058220557	0.0735667231305189
Y	10758400	10763648	5	gain	-	-1	germline	1	0.0143111372839957	0.0366414079174348
Y	10763648	10795136	2	gain	-	-1	germline	1	0.506556555663788	0.182939590821078
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