chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	820008	930644	2	neutral	AA	11.6464	somatic	0	0.00147419377657751	0.00265247475049102
1	1900336	1936130	2	neutral	AA	12.1534	germline	1	0.23139118384025	0.127419843156767
1	2896060	2905822	2	neutral	AA	36.3787	somatic	0	0.0561734889486857	0.234044865487116
1	5496006	5512276	2	neutral	AA	100	somatic	0	0.82058314590729	0.967455247774314
1	5668468	5678230	3	gain	AAB	0.567574	germline	1	0.00270328646126166	0.00496553195130311
1	16611670	16618178	8	gain	AAAAABBB	100	germline	1	0.014307887379577	0.0366340778388189
1	16881752	16943578	4	gain	AABB	1.1338	germline	1	2.03755556507404e-07	3.04946445872645e-08
1	31430386	31433640	6	gain	AAAAAA	3.39935	germline	1	0.083274862133415	0.270054705017299
1	31433640	31475942	2	neutral	AA	36.8079	germline	1	0.956475687420959	0.481343278033557
1	35367726	35380742	2	neutral	AA	100	somatic	0	0.0590654486908618	0.167215556439077
1	36265830	36282100	2	neutral	AA	36.3786	somatic	0	0.410689706149612	0.722107473634121
1	42747798	42803116	2	neutral	AA	54.5728	somatic	0	0.656939277192194	0.937169442143693
1	55662924	55669432	1	loss	A	-1	somatic	0	0.0180558795990099	0.0481207067679057
1	56603330	56619600	2	neutral	AA	100	somatic	0	0.735812407352422	0.994570650639645
1	61113374	61142660	2	neutral	AA	56.5446	somatic	0	0.931412169870569	0.930262088692508
1	64504042	64533328	2	neutral	AA	68.1676	somatic	0	0.147766352331645	0.277612852802101
1	77614408	77982110	2	neutral	AA	18.2845	somatic	0	0.933772144891577	0.497920000349553
1	78782594	78863944	2	neutral	AA	27.3107	somatic	0	0.802619685613675	0.911545745059061
1	87161644	87194184	2	neutral	AA	100	somatic	0	0.0230361686403489	0.0721019902769611
1	92849636	92963526	2	neutral	AA	27.2842	somatic	0	0.172059131325022	0.5989610697
1	104554274	104580306	2	neutral	AA	44.6235	somatic	0	0.577407557853891	0.946029059309706
1	106799534	106825566	2	neutral	AA	100	germline	1	0.408887787475242	0.67742163339989
1	117814324	117856626	2	neutral	AA	100	somatic	0	0.1469951190258	0.390885394334094
1	125067490	125073998	3	gain	-	-1	germline	1	0.0143283685447112	0.0366753170448333
1	125080506	125083760	7	gain	-	-1	germline	1	0.0832716787188335	0.270049176177503
1	125083760	125161856	3	gain	-	-1	germline	1	0.000114631782381791	0.000110517101186369
1	125161856	125165110	5	gain	-	-1	germline	1	0.0832764538776745	0.270057469468182
1	151935768	152222120	2	neutral	AA	100	somatic	0	0.241813664233279	0.372380365211658
1	155729932	155765726	2	neutral	AA	21.8281	germline	1	0.388159204684348	0.810247512212798
1	159924338	159937354	2	neutral	AA	100	somatic	0	0.760582537485918	0.550550409630436
1	164662162	164678432	2	neutral	AA	36.3797	somatic	0	0.496377759046442	0.434356129840565
1	171853502	171886042	2	neutral	AA	27.2879	somatic	0	0.735483015822601	0.974727614024836
1	187746038	187752546	1	loss	A	-1	somatic	0	0.0231232295229502	0.049056279304211
1	192112906	192119414	2	neutral	AA	100	somatic	0	0.769033281123772	0.76007184746354
1	193704112	193863558	2	neutral	AA	100	somatic	0	0.99758512349468	0.318935630150829
1	194094592	194101100	2	neutral	AA	100	germline	1	0.0931127850674823	0.220574358930959
1	196414694	196440726	2	neutral	AA	55.2285	somatic	0	0.580091228898617	0.843387291823738
1	210504514	210546816	2	neutral	AA	54.5742	somatic	0	0.389312729412152	0.164944467728005
1	214545982	214575268	2	neutral	AA	100	somatic	0	0.33872140442217	0.363155623884612
1	221073506	221135332	2	neutral	AA	54.5791	somatic	0	0.334823882792075	0.450120450444156
1	224011868	224015122	9	gain	AAAAAAAAA	1.94432	germline	1	0.0832700870485108	0.27004641178859
1	228066352	228072860	1	loss	A	-1	somatic	0	0.0212399606428964	0.0492154393202746
1	234776100	234782608	7	gain	AAAAABB	5.04684	germline	1	0.0143087664078169	0.0366355904867582
1	236093970	236097224	8	gain	AAAAABBB	29.6521	germline	1	0.0832708828805915	0.270047793980464
1	236097224	236100478	4	gain	AAAA	20.1137	germline	1	0.08327804564658	0.270060233939722
1	245797398	245829938	2	neutral	AA	54.5678	somatic	0	0.939903636318619	0.921235590466226
1	248618616	248703220	2	neutral	AA	89.5364	somatic	0	9.93648798245831e-06	4.04078392214346e-05
2	3179158	3182412	5	gain	-	-1	germline	1	0.083275658002464	0.270056087240159
2	12056070	12072340	3	gain	-	-1	germline	1	0.000108073607036975	9.13603653761585e-05
2	18293988	18297242	0	loss	-	-1	somatic	0	0.083266107980526	0.270039500906681
2	24375714	24388730	1	loss	A	-1	germline	1	0.000790688038776515	0.00147347469107639
2	34472876	34505416	1	loss	A	-1	germline	1	8.08127465497726e-07	1.27591416210215e-07
2	35751698	35767968	1	loss	A	-1	germline	1	0.000290017123623545	0.000233558727732897
2	47801260	48217772	2	neutral	AA	31.2201	somatic	0	0.00875987702417018	0.0327885688717563
2	52522814	52558608	1	loss	A	-1	germline	1	9.4553165860449e-07	1.94695851329918e-07
2	69332978	69417582	2	neutral	AA	33.0115	somatic	0	0.236802638079339	0.154810324783724
2	89774606	89784368	5	gain	-	-1	germline	1	0.0027007454843824	0.00495869423337914
2	89787622	89790876	4	gain	-	-1	germline	1	0.0832804333461504	0.270064380685763
2	89790876	89797384	3	gain	AAA	100	germline	1	0.014961152752844	0.0386021031669718
2	89797384	89807146	4	gain	AABB	11.4637	germline	1	0.00270088277866773	0.00495877101370223
2	89810400	89826670	5	gain	AAAAA	1.67549	germline	1	0.000107565881762979	9.08361870407548e-05
2	89826670	89842940	33	gain	AAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	54.615	germline	1	0.000107531466530143	9.08127483475463e-05
2	89842940	89849448	4	gain	AABB	23.362	germline	1	0.0143101478341581	0.0366374813735301
2	91411368	91414622	5	gain	-	-1	germline	1	0.083275658002464	0.270056087240159
2	96656816	96829278	2	neutral	AA	12.1583	germline	1	0.733356477621544	0.833342593457417
2	109197732	109200986	14	gain	AAAAAAAAAAAAAA	26.4643	germline	1	0.0832684954028333	0.270043647420333
2	127075208	127397354	2	neutral	AA	100	somatic	0	0.340091628726781	0.188226432652791
2	132242560	132245814	4	gain	AABB	10.7068	germline	1	0.08327804564658	0.270060233939722
2	146104600	146117616	1	loss	A	-1	germline	1	0.00144752673421889	0.00142559864967595
2	151685210	151786084	2	neutral	AA	100	somatic	0	0.999871308444071	0.965608121327218
2	169465066	169468320	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
2	182669798	182695830	2	neutral	AA	54.5679	germline	1	0.019818097044472	0.0910915548984699
2	193824510	193827764	0	loss	-	-1	germline	1	0.0832653121854124	0.270038118745792
2	210211654	210234432	2	neutral	AA	100	somatic	0	0.939582224597329	0.707042718955593
2	240415282	240431552	2	neutral	AA	100	somatic	0	0.00158030905561784	0.00519610914824153
2	241560690	241589976	2	neutral	AA	40.4449	somatic	0	0.00765964638831223	0.0563231686252611
2	241589976	241593230	4	gain	AAAA	9.04421	germline	1	0.08327804564658	0.270060233939722
3	185478	191986	1	loss	A	-1	somatic	0	0.0300244086626344	0.06836556629446
3	9576522	9586284	2	neutral	AA	54.5679	somatic	0	0.625680252622496	0.401096161620964
3	10263116	10367244	2	neutral	AA	15.7736	germline	1	0.361012783940507	0.573534445574135
3	10692644	10699152	2	neutral	AA	100	somatic	0	0.322595645081692	0.537459614905392
3	13487830	13500846	2	neutral	AA	100	somatic	0	0.221433356988152	0.521817112152902
3	16364366	16370874	2	neutral	AA	0.93979	somatic	0	0.802164576360562	0.990688900894836
3	27561380	27564634	2	neutral	AA	100	somatic	0	0.364594224587719	0.607477210400625
3	32058408	32061662	1	loss	A	-1	germline	1	0.119005704682348	0.327456796599148
3	32100710	32107218	2	neutral	AA	54.5686	somatic	0	0.232650487337157	0.355446361188886
3	37313618	37417746	2	neutral	AA	100	somatic	0	0.0174898751851967	0.0118316140400464
3	39659752	39676022	2	neutral	AA	100	somatic	0	0.698821705443121	0.860305686764453
3	39920072	39949358	2	neutral	AA	100	somatic	0	0.387342497212963	0.577141973764856
3	42399620	42441922	2	neutral	AA	46.1437	germline	1	0.181446607697869	0.168709364005009
3	42533034	42536288	2	neutral	AA	100	somatic	0	0.737226347543793	0.868449491957565
3	52994644	53004406	1	loss	A	-1	germline	1	0.00448762152033647	0.00714480763360703
3	56017610	56033880	2	neutral	AA	36.5421	somatic	0	0.613370586668908	0.366452160111661
3	56964524	56993810	2	neutral	AA	55.9426	somatic	0	0.949371462015474	0.965594842911278
3	63283792	63293554	2	neutral	AA	100	somatic	0	0.860913736567777	0.839988711168324
3	69163770	69212580	2	neutral	AA	54.5678	somatic	0	0.628129669312844	0.866351194227162
3	71142202	71145456	2	neutral	AA	100	somatic	0	0.837398614134657	0.913239770297651
3	80012606	80015860	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
3	82876126	82931444	2	neutral	AA	100	somatic	0	0.0037762022835066	0.00680989312425784
3	90233420	90285484	2	neutral	AA	41.6729	somatic	0	0.881706055430314	0.542898445514854
3	90614138	90617392	4	gain	-	-1	somatic	0	0.0832812292583305	0.270065762944772
3	90669456	90715012	1	loss	A	-1	germline	1	9.76026544041083e-07	6.12900430407848e-09
3	94541716	95111166	2	neutral	AA	15.5257	somatic	0	0.606733909528541	0.654848220352552
3	98680804	98693820	1	loss	A	-1	somatic	0	0.00807427429984351	0.0117629620828578
3	101524800	101528054	2	neutral	AA	100	somatic	0	0.573337724055032	0.772357060361838
3	105068406	105097692	2	neutral	AA	100	somatic	0	0.232587673920123	0.235570280758106
3	108468836	108494868	2	neutral	AA	36.3786	somatic	0	0.0626972383136551	0.118075670249167
3	110297584	110372426	2	neutral	AA	43.1154	somatic	0	0.233833913994004	0.227496732867808
3	111127354	111198942	2	neutral	AA	54.5678	somatic	0	0.138787641994676	0.452130853309608
3	123141122	123154138	2	neutral	AA	27.2839	somatic	0	0.138998762662617	0.0908093677099088
3	123424220	123446998	2	neutral	AA	100	somatic	0	0.23155562874662	0.42398763496774
3	125604400	125633686	2	neutral	AA	36.3786	somatic	0	0.943005622547881	0.522520959311623
3	128233632	128298712	2	neutral	AA	46.2874	somatic	0	0.505089616795821	0.67512187562974
3	130413812	130433336	2	neutral	AA	100	somatic	0	0.864795155667244	0.919888211623822
3	131656840	131689380	2	neutral	AA	100	germline	1	0.456528137793319	0.425930713405134
3	133423762	133453048	2	neutral	AA	36.6116	somatic	0	0.572298427715958	0.841823416233096
3	137331816	137387134	2	neutral	AA	100	somatic	0	0.75331102298586	0.781628621140107
3	139222390	139261438	2	neutral	AA	54.5678	somatic	0	0.242421684354984	0.287610860430551
3	140471926	140491450	2	neutral	AA	100	somatic	0	0.582114665055253	0.982346719298485
3	142512184	142534962	2	neutral	AA	54.5681	somatic	0	0.888870704693014	0.986054516808322
3	146667542	146674050	1	loss	A	-1	somatic	0	0.023157278883635	0.0559804856566427
3	148658990	148730578	2	neutral	AA	100	somatic	0	0.947795447211816	0.526911501631701
3	153696182	153712452	2	neutral	AA	100	somatic	0	0.822134080439738	0.960308608033831
3	162413648	162426664	1	loss	A	-1	germline	1	0.0010603098878082	0.00157276549365204
3	162807382	162826906	1	loss	A	-1	germline	1	8.32238516953677e-05	4.34491826653005e-05
3	164753274	164763036	2	neutral	AA	100	somatic	0	0.534502574236588	0.45796141423102
3	167655842	167727430	2	neutral	AA	100	somatic	0	0.139109746375067	0.503650036349488
3	168648312	168654820	2	neutral	AA	100	somatic	0	0.224090887092043	0.547439110297235
3	169094110	169100618	2	neutral	AA	36.3786	somatic	0	0.662468339301995	0.826700928924651
3	177382048	177453636	2	neutral	AA	21.9043	somatic	0	0.771864218380305	0.93676041138699
3	185429190	185438952	2	neutral	AA	54.5678	somatic	0	0.571841666226752	0.862402511201751
3	191348216	191354724	1	loss	A	-1	somatic	0	0.0259490351532104	0.0557427148315888
3	193157440	193167202	1	loss	A	-1	germline	1	0.00411180811407488	0.00724124044526731
3	197384386	197390894	3	gain	AAB	2.02965	somatic	0	0.0143116549788876	0.0366397505503698
3	198038440	198044948	2	neutral	AA	54.5687	somatic	0	0.0567096516847469	0.12243696513792
4	126906	133414	1	loss	A	-1	germline	1	0.0250183459414731	0.0521720214873479
4	7861664	7864918	4	gain	-	-1	germline	1	0.0832804333461504	0.270064380685763
4	40294282	40297536	4	gain	-	-1	germline	1	0.08327804564658	0.270060233939722
4	46200292	46203546	1	loss	A	-1	somatic	0	0.0832764538776745	0.270057469468185
4	49652786	49656040	14	gain	-	-1	somatic	0	0.0832684954028333	0.270043647420333
4	63827210	63849988	1	loss	A	-1	germline	1	5.81122358781823e-05	4.45140115351572e-05
4	114254448	114260956	1	loss	A	-1	somatic	0	0.0226244340939308	0.0560570188507732
4	134510598	134517106	1	loss	A	-1	somatic	0	0.0247773231993364	0.0694673228446927
4	137169116	137178878	1	loss	A	-1	germline	1	0.00570398844195787	0.00956038953565441
4	146003726	146006980	0	loss	-	-1	germline	1	0.0832669037818006	0.270040883072735
4	172504302	172510810	1	loss	A	-1	somatic	0	0.0207242974344474	0.0468256365864794
4	185520302	185523556	0	loss	-	-1	germline	1	0.0832669037818006	0.270040883072735
4	186171102	186177610	0	loss	-	-1	germline	1	0.0143080129521232	0.0366352123196509
4	189268910	189278672	1	loss	A	-1	somatic	0	0.00753113711133714	0.00988116279638562
5	13016	16270	3	gain	AAB	6.62236	somatic	0	0.0832828211011759	0.270068527478282
5	413258	416512	4	gain	AABB	15.379	somatic	0	0.0832812292583305	0.270065762944772
5	667070	676832	2	neutral	AA	15.6074	somatic	0	0.0918839904051757	0.308667534254626
5	758182	764690	3	gain	AAB	5.21349	germline	1	0.0143116549788876	0.0366397505503698
5	816754	894850	2	neutral	AA	41.4333	somatic	0	4.52705730562638e-07	2.73105934245343e-06
5	1539142	1542396	3	gain	AAB	4.83093	somatic	0	0.0833210327241884	0.270134882479649
5	3322334	3325588	3	gain	AAB	4.06519	germline	1	0.083317051684296	0.270127969945175
5	4542584	4575124	2	neutral	AA	100	somatic	0	0.25271764975655	0.228269450823886
5	5814898	5818152	1	loss	A	-1	somatic	0	0.12213206729597	0.332111459863999
5	10760978	10803280	2	neutral	AA	54.5679	somatic	0	0.121134771992999	0.276853952710252
5	12817506	12820760	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
5	14346886	14350140	3	gain	AAB	34.408	somatic	0	0.0832828211011759	0.270068527478282
5	19218124	19221378	1	loss	A	-1	somatic	0	0.115514415572531	0.322197754414513
5	21427590	21450368	2	neutral	AA	61.2648	somatic	0	0.18564176991157	0.121268199403677
5	21450368	21453622	1	loss	A	-1	somatic	0	0.0844377757117485	0.27206852444524
5	22664110	22761730	2	neutral	AA	36.8231	somatic	0	0.915796221517475	0.997223395896839
5	26796690	26803198	1	loss	A	-1	somatic	0	0.0241318703844107	0.0575568664367884
5	46320690	50245014	2	neutral	AA	3.13677	somatic	0	0.000191233435352097	0.00637105586478437
5	54452436	54517516	2	neutral	AA	100	somatic	0	0.844234536660132	0.956967050500546
5	55067442	55197602	2	neutral	AA	100	somatic	0	0.431638664001562	0.402881495454236
5	55428636	55477446	2	neutral	AA	100	germline	1	0.51605279320214	0.22013116714961
5	57976518	58015566	2	neutral	AA	100	germline	1	0.953311703250907	0.878147593148595
5	58598032	58604540	2	neutral	AA	100	somatic	0	0.241857565440383	0.652217313351462
5	82905412	82928190	2	neutral	AA	54.5693	somatic	0	0.803311929808823	0.919659545529475
5	83074620	83126684	2	neutral	AA	100	germline	1	0.126480323601694	0.519609872337776
5	120603002	120681098	2	neutral	AA	100	somatic	0	0.761713971949084	0.713860170463714
5	128903956	128910464	2	neutral	AA	100	somatic	0	0.176189852511687	0.33026633439076
5	135649498	135743864	2	neutral	AA	100	somatic	0	0.875188615976445	0.398068217702281
5	143869102	143911404	2	neutral	AA	36.6091	somatic	0	0.0494226465011818	0.11173343566081
5	170864286	170893572	2	neutral	AA	100	somatic	0	0.0760190675290457	0.265499338383238
5	178582774	178586028	5	gain	AAABB	7.27977	germline	1	0.083275658002464	0.270056087240159
5	178680394	178686902	1	loss	A	-1	somatic	0	0.0264458422787163	0.0570468386090991
5	179454846	179477624	2	neutral	AA	21.8283	somatic	0	0.0387218028094041	0.238937448769651
5	181007004	181052560	2	neutral	AA	15.5491	somatic	0	0.000440734872060347	3.63545278431188e-05
5	181098116	181101370	1	loss	A	-1	somatic	0	0.122598657313719	0.332801086835722
6	162700	178970	2	neutral	AA	54.5689	somatic	0	0.127336273596414	0.27677733998044
6	296114	383972	3	gain	AAB	0.596823	germline	1	1.03942197680707e-18	0
6	859056	862310	4	gain	AABB	8.98708	germline	1	0.0832812292583305	0.270065762944772
6	1897082	1929622	2	neutral	AA	5.4999	somatic	0	9.00675121227603e-06	0.000132986634909127
6	2642248	2658518	2	neutral	AA	100	somatic	0	0.173896850249055	0.277474608177556
6	4047976	4070754	2	neutral	AA	100	somatic	0	0.873537858761514	0.973803115096702
6	4991636	5014414	2	neutral	AA	100	somatic	0	0.789102918606829	0.702453974069601
6	7435390	7458168	2	neutral	AA	40.1778	somatic	0	0.400737544106129	0.493948127474458
6	8336748	8343256	1	loss	A	-1	germline	1	0.0199081320633488	0.0539245101187651
6	8968024	8981040	2	neutral	AA	39.9869	somatic	0	0.197662930257763	0.32412817975993
6	9052628	9065644	2	neutral	AA	54.5678	somatic	0	0.916115118005662	0.825999344847399
6	13399972	13406480	2	neutral	AA	100	somatic	0	0.101092403934129	0.203634656176308
6	18616134	18671452	2	neutral	AA	79.168	somatic	0	0.652260437454575	0.400921274183061
6	19042408	19048916	1	loss	A	-1	germline	1	0.0157041626674512	0.0393703178032767
6	20959014	20962268	4	gain	-	-1	germline	1	0.08327804564658	0.270060233939722
6	27138360	27177408	2	neutral	AA	23.7908	somatic	0	0.641963444640917	0.862737907524013
6	27561380	28508294	2	neutral	AA	33.7636	somatic	0	0.231657678829465	0.208981083369801
6	32487936	32530238	0	loss	-	-1	germline	1	9.63802563380562e-07	2.25265592401769e-07
6	32556270	32592064	2	neutral	AA	1.05838	somatic	0	0.0148833681134437	0.077273573291464
6	34258112	34277636	2	neutral	AA	27.286	somatic	0	0.271501511983211	0.413397207748537
6	35657332	35663840	1	loss	A	-1	germline	1	0.020398097164124	0.0553855220921732
6	35787492	35797254	4	gain	AAAB	7.51514	germline	1	0.00270104296339448	0.00495907814589225
6	37417746	37508858	2	neutral	AA	27.387	somatic	0	0.0525662696512311	0.102304422629281
6	41218418	41228180	2	neutral	AA	10.9539	somatic	0	0.169485506799696	0.143011419187224
6	45399808	45406316	2	neutral	AA	54.5678	somatic	0	0.757126314685852	0.984007768924354
6	48868572	48894604	2	neutral	AA	100	somatic	0	0.151098997658023	0.127256002891208
6	55780068	55789830	2	neutral	AA	100	somatic	0	0.850070734474066	0.8484874010548
6	60231540	60234794	3	gain	-	-1	germline	1	0.0833106823409503	0.270116910158563
6	60234794	60241302	4	gain	-	-1	germline	1	0.0143101478341581	0.036637859561131
6	62379180	62776168	2	neutral	AA	100	somatic	0	0.807771871090788	0.368763727726237
6	73530638	73543654	2	neutral	AA	100	somatic	0	0.0471754630412172	0.158555960689119
6	73882070	73891832	1	loss	A	-1	germline	1	0.0046342016668336	0.00830206684924095
6	76387650	76390904	0	loss	-	-1	germline	1	0.0832653121854124	0.270038118745792
6	78811880	78818388	1	loss	A	-1	germline	1	0.0171458307932115	0.0450380745741371
6	81948736	81978022	2	neutral	AA	100	somatic	0	0.181145692927014	0.149404695521614
6	82319692	82339216	2	neutral	AA	100	somatic	0	0.304238473100969	0.284058852189586
6	84239552	84262330	2	neutral	AA	27.5162	somatic	0	0.127506099438114	0.229976523067881
6	100743840	100799158	2	neutral	AA	54.5794	germline	1	0.619855243563775	0.991148483106033
6	103288468	103314500	1	loss	A	-1	germline	1	1.43160644909504e-05	6.78012512089765e-06
6	110073058	110092582	1	loss	A	-1	germline	1	5.51462392990814e-05	4.50418779065487e-05
6	118644094	118647348	6	gain	AAAAAA	8.01692	germline	1	0.083274862133415	0.270054705017299
6	122916596	123072788	2	neutral	AA	100	somatic	0	0.152235596342068	0.19068674969007
6	154809050	154838336	2	neutral	AA	100	somatic	0	0.564048076745807	0.584562149161329
6	157308122	157311376	8	gain	AAAAABBB	4.01232	germline	1	0.0832708828805915	0.270047793980464
6	157773444	157783206	2	neutral	AA	27.2839	somatic	0	0.30286801513469	0.439756112457659
6	158102098	158352656	2	neutral	AA	13.2347	somatic	0	0.882347587763776	0.750539269999792
6	158534880	158557658	2	neutral	AA	100	germline	1	0.236417958152762	0.298018195350364
6	159049012	159055520	2	neutral	AA	100	somatic	0	0.191839962245917	0.324468857416471
6	160194420	160259500	2	neutral	AA	4.00836	somatic	0	0.0225956008958338	0.0389870627513341
6	166835834	166848850	2	neutral	AA	100	germline	1	0.107496117688854	0.148223651130435
6	168658074	168661328	3	gain	AAB	5.57931	germline	1	0.0832828211011759	0.270068527478282
6	170145152	170148406	4	gain	AAAA	13.7171	germline	1	0.08327804564658	0.270060233939722
7	904612	907866	5	gain	AAABB	21.9911	germline	1	0.0832764538776745	0.270057469468182
7	5434180	5450450	2	neutral	AA	36.3789	somatic	0	0.956256030215634	0.995911994870184
7	20230118	20239880	1	loss	A	-1	somatic	0	0.00695596412741683	0.00946166868220077
7	23998250	24001504	1	loss	A	-1	somatic	0	0.0834174208818519	0.270302205183359
7	27105820	27161138	2	neutral	AA	37.0891	germline	1	0.156604421559597	0.320253443181557
7	39506814	39513322	1	loss	A	-1	somatic	0	0.0210531860208108	0.0558964029445583
7	57478656	57481910	2	neutral	AA	100	somatic	0	0.17143391675921	0.399960664963705
7	57481910	57491672	3	gain	AAB	2.17863	germline	1	0.0420445067323656	0.13913817779759
7	57491672	57498180	3	gain	AAA	39.8901	germline	1	0.0143120317869476	0.0366420198501751
7	61045040	61054802	3	gain	-	-1	germline	1	0.00270159223407903	0.00495999964709104
7	62301084	62450768	3	gain	AAB	0.47311	somatic	0	2.8124906280915e-10	1.2023559925467e-10
7	64907538	64914046	2	neutral	AA	100	germline	1	0.60217337065538	0.813406317487442
7	64923808	65480242	2	neutral	AA	9.88696	somatic	0	0.0728159706006493	0.106642761306569
7	65486750	65490004	3	gain	AAA	10.6443	somatic	0	0.0832820251766723	0.270067145208945
7	65795880	65821912	3	gain	AAB	0.187247	germline	1	1.05085831612872e-06	3.44938306584552e-07
7	67019384	67022638	3	gain	AAB	21.2219	somatic	0	0.0832828211011759	0.270068527478282
7	71653080	71692128	2	neutral	AA	34.3123	somatic	0	0.887120273885448	0.896807869657916
7	74412472	74418980	1	loss	A	-1	somatic	0	0.021876010964118	0.0557552360500271
7	76078520	76114314	2	neutral	AA	15.5908	somatic	0	0.553238608771031	0.231994953835684
7	100948842	100955350	3	gain	AAA	15.15	germline	1	0.0143337758606239	0.0367037162280615
7	100955350	100958604	9	gain	AAAAAAAAA	13.9597	germline	1	0.0832708828805915	0.270047793980464
7	100958604	100961858	5	gain	AAABB	5.09881	germline	1	0.0832764538776745	0.270057469468182
7	100961858	100971620	3	gain	AAB	0.464185	germline	1	0.00271154250593569	0.00497784621719954
7	100971620	101017176	2	neutral	AA	0.844379	somatic	0	0.464021045396875	0.865319170301355
7	101622420	101690754	2	neutral	AA	61.6998	somatic	0	0.357147070149798	0.598121047399901
7	106099924	106103178	3	gain	AAB	17.4453	somatic	0	0.0832828211011759	0.270068527478282
7	109802976	109812738	1	loss	A	-1	germline	1	0.0054793378698354	0.00900888809688616
7	116291452	116301214	1	loss	A	-1	germline	1	0.00442426585355141	0.00864573392159107
7	119190766	119194020	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
7	134100594	134113610	1	loss	A	-1	germline	1	0.000968201890210496	0.00145127394532185
7	139407868	139437154	2	neutral	AA	37.0293	germline	1	0.869513715134541	0.800569902148694
7	143846324	143849578	4	gain	AAAB	37.3686	germline	1	0.0832772497590465	0.27005885170137
7	148375892	148379146	1	loss	A	-1	somatic	0	0.0841014883142298	0.271488069739168
7	151476954	151532272	2	neutral	AA	100	somatic	0	0.294575280009669	0.150885785078159
7	152401090	152407598	12	gain	AAAAAAAAAABB	5.49951	germline	1	0.014307259531428	0.0366333215353413
7	154600794	154607302	1	loss	A	-1	somatic	0	0.0158876815564758	0.0402880567734351
7	155326436	155336198	3	gain	AAB	2.46702	somatic	0	0.00270920095728936	0.00497977284786699
7	157324392	157330900	1	loss	A	-1	somatic	0	0.0277526530761507	0.056809051034674
7	158150908	158154162	4	gain	AAAB	100	germline	1	0.0832804333461504	0.270064380685763
7	158593452	158596706	5	gain	AAABB	100	germline	1	0.083275658002464	0.270056087240159
8	647546	650800	1	loss	A	-1	germline	1	0.105115328248206	0.306130979612968
8	689848	712626	2	neutral	AA	69.9679	somatic	0	0.241864335217971	0.153649865228178
8	3745354	3761624	2	neutral	AA	54.5678	somatic	0	0.338082169434445	0.268986743932618
8	5736802	5749818	1	loss	A	-1	germline	1	0.00113568703190412	0.00160815118399316
8	6111012	6117520	1	loss	A	-1	germline	1	0.0207876408119449	0.0566813647435057
8	9830334	9895414	2	neutral	AA	35.745	somatic	0	0.499389613760275	0.44561394599928
8	14760144	14795938	2	neutral	AA	100	somatic	0	0.355001300940112	0.381551149965106
8	16930562	16940324	2	neutral	AA	100	somatic	0	0.0187123710529592	0.0927356460127948
8	25208738	25211992	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
8	25211992	25215246	1	loss	A	-1	germline	1	0.122331400884061	0.332405753294552
8	29897752	29927038	2	neutral	AA	38.8261	somatic	0	0.988178851342242	0.878206194186783
8	33499930	33509692	2	neutral	AA	36.3786	somatic	0	0.017443060797662	0.0195803940371109
8	35956700	35963208	2	neutral	AA	8.39506	somatic	0	0.10808138211599	0.249995563043603
8	42331286	42337794	1	loss	A	-1	somatic	0	0.0292244876356851	0.0567283201650404
8	43235898	43239152	5	gain	AAABB	100	germline	1	0.0832764538776745	0.270057469468182
8	43239152	43242406	9	gain	AAAAAABBB	1.333	germline	1	0.0832692912225914	0.270045029601879
8	43375820	43401852	2	neutral	AA	54.5678	somatic	0	0.403308533511187	0.654620308276955
8	46493152	46496406	1	loss	A	-1	germline	1	0.0832852089116574	0.270072674317281
8	51110578	51217960	2	neutral	AA	100	somatic	0	0.269944735797227	0.469648647204812
8	74448266	74454774	1	loss	A	-1	somatic	0	0.0281245069803836	0.0690903361177193
8	77129562	77158848	2	neutral	AA	100	somatic	0	0.417711167676177	0.227826415297273
8	86175682	86182190	0	loss	-	-1	germline	1	0.0143065061457297	0.03663218710574
8	86976166	86982674	2	neutral	AA	100	somatic	0	0.307236776370216	0.302420749568465
8	96077604	96106890	2	neutral	AA	100	somatic	0	0.0538192051748649	0.0448743317462509
8	96110144	96149192	2	neutral	AA	54.5873	germline	1	0.478087947323398	0.895800775041132
8	97144916	97157932	2	neutral	AA	100	germline	1	0.0369982343258641	0.061197683193656
8	109458052	109467814	2	neutral	AA	58.0998	somatic	0	0.15736561123421	0.368126208193204
8	111280292	111286800	1	loss	A	-1	germline	1	0.0207005002790123	0.056008355194975
8	111286800	111426722	2	neutral	AA	77.478	somatic	0	0.654164625317859	0.461600922601704
8	132672088	132691612	2	neutral	AA	36.3786	germline	1	0.620501085285028	0.7239717309014
8	139515250	139538028	2	neutral	AA	100	somatic	0	0.94928163925225	0.812244054550259
8	141737732	141757256	2	neutral	AA	5.50544	germline	1	0.0614738471694622	0.223557027745166
8	144122914	144126168	5	gain	AAABB	61.8704	germline	1	0.0832764538776745	0.270057469468182
9	5304020	5336560	3	gain	-	-1	germline	1	9.67529902650164e-07	2.27161420340849e-07
9	23363720	23376736	1	loss	A	-1	germline	1	0.00131267463987492	0.00150893357040904
9	40912542	40915796	7	gain	-	-1	germline	1	0.0832716787188335	0.270049176177503
9	40922304	40928812	6	gain	-	-1	somatic	0	0.0143091431487885	0.0366359686572817
9	42386604	42389858	5	gain	AAABB	16.6491	somatic	0	0.083275658002464	0.270056087240159
9	80471420	80494198	2	neutral	AA	100	somatic	0	0.222615029716797	0.514845551790435
9	83595260	83598514	2	neutral	AA	100	somatic	0	0.852885265971479	0.91925627716089
9	88515308	88541340	2	neutral	AA	39.2706	somatic	0	0.348461796716423	0.451511502941859
9	93536230	93581786	2	neutral	AA	100	somatic	0	0.205041995282939	0.160046237150779
9	93646866	93679406	2	neutral	AA	27.2847	somatic	0	0.293503244023037	0.594626103618118
9	95739188	95758712	2	neutral	AA	38.5086	somatic	0	0.392048216381593	0.640403979838146
9	97838018	97857542	2	neutral	AA	27.3167	somatic	0	0.0394725341522841	0.0452114838694893
9	101951074	101964090	1	loss	A	-1	germline	1	0.00148523237266167	0.00163954800265298
9	103011878	103015132	1	loss	A	-1	somatic	0	0.0835170902455621	0.27047513862638
9	104212604	104238636	2	neutral	AA	77.6807	somatic	0	0.844085671428984	0.998671420951564
9	110261790	110268298	1	loss	A	-1	germline	1	0.024564290486217	0.0561062662588356
9	110382188	110408220	2	neutral	AA	54.6208	somatic	0	0.0283001248105202	0.102906028652827
9	112285778	112624194	2	neutral	AA	47.5855	somatic	0	0.0967127230811379	0.0632154907476771
9	117160270	117183048	2	neutral	AA	100	somatic	0	0.273745170422886	0.179912690489534
9	117485670	117495432	2	neutral	AA	100	somatic	0	0.927254351724254	0.991496101897695
9	120599748	120612764	2	neutral	AA	100	somatic	0	0.741469316868105	0.790420046164437
9	126333296	126362582	2	neutral	AA	100	somatic	0	0.686494164775991	0.795701950104258
9	129424596	129444120	3	gain	AAB	0.242845	germline	1	2.22155332416551e-05	1.23835330052557e-05
9	131058104	131064612	2	neutral	AA	39.9807	somatic	0	0.0930952365355556	0.148990649456054
9	135301320	135320844	2	neutral	AA	8.3928	germline	1	0.0268301013917909	0.0413045791507541
9	135320844	135327352	1	loss	A	-1	germline	1	0.021529924033537	0.055193091112861
9	136801414	136804668	4	gain	AABB	100	somatic	0	0.0832812292583305	0.270065762944772
9	136804668	136833954	2	neutral	AA	14.8812	somatic	0	0.634020587489127	0.967003744230584
9	137325308	137328562	6	gain	AAAABB	3.86186	germline	1	0.083274862133415	0.270054705017299
9	137715788	137719042	5	gain	AAABB	19.2054	germline	1	0.0832764538776745	0.270057469468182
10	38488312	38491566	5	gain	-	-1	germline	1	0.0832764538776745	0.270057469468182
10	38524106	38527360	6	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
10	38572916	38582678	3	gain	-	-1	germline	1	0.00270156934576292	0.00495984605265842
10	38582678	38595694	1	loss	A	-1	germline	1	0.00209967044147528	0.00175675068009118
10	38784426	38836490	3	gain	-	-1	germline	1	3.524174824725e-11	3.97837318644179e-12
10	39337606	39353876	1	loss	A	-1	germline	1	0.000176656215766594	0.000173823724521571
10	41839932	41843186	3	gain	AAB	6.95422	somatic	0	0.0847642502876788	0.272631788334189
10	41856202	41891996	25	gain	AAAAAAAAAAAAAAAAABBBBBBBB	8.50768	germline	1	0.000107533231161113	9.08150919582962e-05
10	42298746	42321524	3	gain	AAB	1.13752	germline	1	4.63981353265187e-06	1.70511107133731e-06
10	43317248	43330264	2	neutral	AA	54.5678	somatic	0	0.587191942218013	0.565799539993952
10	46515930	46561486	4	gain	AABB	0.606903	germline	1	4.24697213264841e-10	1.02363673093464e-11
10	52255986	52259240	1	loss	A	-1	somatic	0	0.0832732704138015	0.270051940587075
10	54686724	54709502	4	gain	AAAB	2.5936	germline	1	4.59771724506005e-06	1.66447002991621e-06
10	62938868	62945376	2	neutral	AA	100	somatic	0	0.76433948460296	0.587786460295929
10	65437940	65473734	2	neutral	AA	36.3786	somatic	0	0.451861385159666	0.357865797907734
10	70670372	70683388	2	neutral	AA	100	somatic	0	0.831466097008623	0.978056866929035
10	76495032	76501540	1	loss	A	-1	somatic	0	0.0206508983117868	0.0483773398479891
10	77630678	77656710	2	neutral	AA	36.3851	somatic	0	0.126465324768804	0.184604792437321
10	92381060	92433124	2	neutral	AA	100	somatic	0	0.418224628423941	0.692438349861552
10	93506944	93562262	2	neutral	AA	31.5248	somatic	0	0.471624855439914	0.597357214845898
10	93845360	93855122	2	neutral	AA	54.5678	somatic	0	0.213598045006148	0.188238763899472
10	97268568	97307616	2	neutral	AA	100	somatic	0	0.0600783275468056	0.271423598805845
10	97385712	97405236	2	neutral	AA	55.0709	somatic	0	0.154688789822087	0.290180083711592
10	103382834	103399104	2	neutral	AA	54.5693	somatic	0	0.468127356749529	0.591519116016485
10	106236592	106321196	2	neutral	AA	100	somatic	0	0.170808985852765	0.228697477653742
10	112350858	112357366	1	loss	A	-1	germline	1	0.0158050407268363	0.0411791394047936
10	118640840	118647348	2	neutral	AA	100	somatic	0	0.0286154914165196	0.0621721540469705
10	119659342	119669104	2	neutral	AA	54.5011	somatic	0	0.480342548150196	0.725093846296121
10	123635730	123661762	2	neutral	AA	36.3786	somatic	0	0.777129257242821	0.726634112038427
10	127729262	127742278	2	neutral	AA	15.4687	germline	1	0.609181835173934	0.866360350358243
10	128461412	128464666	6	gain	AAABBB	32.2142	germline	1	0.083274862133415	0.270054705017299
10	130459368	130657862	2	neutral	AA	6.84887	somatic	0	1.20259458931189e-05	0.000556602486431412
10	131741444	131757714	2	neutral	AA	11.6497	somatic	0	0.00369242440291512	0.0165315216133877
10	131822794	132362958	2	neutral	AA	13.8526	somatic	0	7.77390843487537e-25	0
10	132362958	132366212	4	gain	AAAA	29.4492	germline	1	0.08327804564658	0.270060233939722
10	133052806	133059314	2	neutral	AA	36.3786	somatic	0	0.0301392269314025	0.0842094804937382
11	423020	462068	2	neutral	AA	31.1122	somatic	0	0.537497339091211	0.612325771509182
11	2046766	2066290	3	gain	AAB	24.9584	somatic	0	2.46434840971251e-05	1.65949238438712e-05
11	3218206	3224714	1	loss	A	-1	somatic	0	0.0229370188513027	0.0570473938900167
11	5762834	5788866	1	loss	A	-1	germline	1	4.20329092778233e-06	1.2384810209598e-06
11	10982250	11005028	2	neutral	AA	36.5214	somatic	0	0.825359151855814	0.902673013237507
11	18922010	18941534	1	loss	A	-1	germline	1	5.21210412662692e-05	2.85696145698733e-05
11	20402580	20409088	2	neutral	AA	100	somatic	0	0.0589472622319634	0.111145430778787
11	20483930	20503454	2	neutral	AA	100	somatic	0	0.0464325460695774	0.0833676270488851
11	23435308	23490626	2	neutral	AA	36.3786	somatic	0	0.0780397590408874	0.236076738564098
11	25413740	25420248	2	neutral	AA	100	somatic	0	0.150751963496476	0.349412668653168
11	28983378	28993140	1	loss	A	-1	germline	1	0.0278519810820556	0.0560253013323513
11	48793730	48845794	2	neutral	AA	4.3183	somatic	0	6.56297187829814e-06	0.000502443908851125
11	48845794	48858810	2	neutral	AA	-1	germline	1	NA	NA
11	48858810	48862064	1	loss	A	-1	somatic	0	0.117565748090993	0.325296703192558
11	48862064	48865318	2	neutral	AA	-1	germline	1	NA	NA
11	48865318	49093098	2	neutral	AA	1.39993	somatic	0	0.0166137478424397	0.0462196416385569
11	54755058	54758312	1	loss	A	-1	germline	1	0.0833019251378693	0.270101703491648
11	55116252	55122760	1	loss	A	-1	somatic	0	0.024616516322419	0.0562553290507589
11	55220380	55256174	2	neutral	AA	10.9557	germline	1	0.0266832353969221	0.134858009799483
11	55597844	55685702	1	loss	A	-1	germline	1	8.35878666778338e-16	0
11	58864860	58871368	1	loss	A	-1	somatic	0	0.0261713514640207	0.067628009169266
11	63426968	63430222	3	gain	AAB	23.5062	germline	1	0.0832875967775959	0.270076821202754
11	64312056	64318564	2	neutral	AA	21.4751	somatic	0	0.574626468876175	0.749842778695212
11	65594132	65629926	2	neutral	AA	54.5678	somatic	0	0.182136934917967	0.115683124213355
11	65900008	65935802	2	neutral	AA	54.6192	somatic	0	0.0322487032738902	0.0524808633040371
11	66941288	66951050	1	loss	A	-1	somatic	0	0.00780939925798412	0.0104762952426211
11	70107430	70133462	2	neutral	AA	27.3874	germline	1	0.992599707658316	0.964959327016915
11	70371004	70374258	3	gain	AAB	50.1577	somatic	0	0.0833019251378693	0.270101703491646
11	77012418	77022180	2	neutral	AA	100	somatic	0	0.984362161191315	0.794226063294225
11	78515766	78554814	2	neutral	AA	100	somatic	0	0.00535464188840558	0.0027030708006629
11	90920014	90936284	2	neutral	AA	100	germline	1	0.0309244640489398	0.0254841816920027
11	91479702	91492718	2	neutral	AA	27.2839	germline	1	0.265046295946091	0.321556670469424
11	93750994	93809566	2	neutral	AA	100	somatic	0	0.0179626561362551	0.0674767294245248
11	97616746	97639524	2	neutral	AA	11.0085	somatic	0	0.299597376941689	0.436701012408812
11	100356614	100408678	2	neutral	AA	100	germline	1	0.375390209765575	0.273156494015585
11	104443638	104450146	2	neutral	AA	100	somatic	0	0.808977163409444	0.809837883708758
11	123186678	123238742	2	neutral	AA	45.2283	somatic	0	0.434178182326491	0.752863672983576
11	124208434	124289784	2	neutral	AA	100	somatic	0	0.443948868504573	0.134565268649292
11	124904790	124908044	1	loss	A	-1	germline	1	0.0847363997639598	0.272584469370104
12	2255022	2258276	10	gain	AAAAAABBBB	18.4281	germline	1	0.0832692912225914	0.270045029601879
12	8626354	8665402	2	neutral	AA	36.3786	somatic	0	0.678320575127969	0.902715947998364
12	18095494	18098748	1	loss	A	-1	germline	1	0.0833146631343187	0.270123822486465
12	20874410	20923220	2	neutral	AA	100	somatic	0	0.981284080522871	0.5887034109275
12	29643940	29722036	2	neutral	AA	28.025	somatic	0	0.0790362416614758	0.00422043441305953
12	30083230	30089738	1	loss	A	-1	germline	1	0.0240495649033813	0.0512272370727078
12	33233102	33242864	1	loss	A	-1	germline	1	0.00368088837089521	0.00667906043408861
12	34101920	34114936	1	loss	A	-1	germline	1	0.00177701095271163	0.00153663263305204
12	34677878	37752908	2	neutral	AA	0.938304	somatic	0	1.18236204295215e-11	5.06880037942636e-09
12	70478386	70484894	1	loss	A	-1	germline	1	0.025355769949685	0.0531981708856454
12	83468354	84086614	2	neutral	AA	100	somatic	0	0.434303000554307	0.102554406316713
12	98000718	98169926	2	neutral	AA	100	somatic	0	0.237190701190003	0.34989408965148
12	126821396	126831158	1	loss	A	-1	germline	1	0.00541874903673141	0.00945419828643934
13	18232162	18235416	1	loss	A	-1	germline	1	0.104370106882728	0.304954816338245
13	21375526	21378780	3	gain	-	-1	somatic	0	0.0832891887190313	0.270079585818891
13	22019818	22023072	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
13	23057844	23064352	1	loss	A	-1	germline	1	0.0213427122181284	0.0559788466434926
13	48959684	48962938	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
13	50498826	50502080	1	loss	A	-1	germline	1	0.0866631940591314	0.275891587265867
13	57176034	57215082	1	loss	A	-1	germline	1	1.44086131173512e-08	1.03789477012839e-09
13	63026726	63059266	3	gain	-	-1	germline	1	1.58291404347655e-06	5.09926315050979e-06
13	63059266	63069028	4	gain	-	-1	germline	1	0.00270145490684018	0.00496023004691493
13	66599618	66602872	1	loss	A	-1	germline	1	0.0832732704138015	0.270051940587075
13	67527008	67530262	3	gain	-	-1	germline	1	0.0832828211011759	0.270068527478282
13	94369254	94405048	2	neutral	AA	36.3786	somatic	0	0.990405895861321	0.7879753942916
13	95462598	95478868	2	neutral	AA	100	germline	1	0.371583102102474	0.409920141565497
13	96110144	96152446	2	neutral	AA	99.119	somatic	0	0.128098992661722	0.0533228569823969
13	98843504	98869536	2	neutral	AA	100	somatic	0	0.468391551068496	0.666676410844885
13	101241702	101244956	0	loss	-	-1	germline	1	0.0832692912225914	0.270045029601881
13	104235382	104248398	2	neutral	AA	17.5604	somatic	0	0.301496228890056	0.24074632107634
13	106353736	106356990	2	neutral	AA	100	somatic	0	0.150108836079421	0.37177815185395
13	107466604	107495890	2	neutral	AA	54.5678	somatic	0	0.835985392459027	0.954613222790384
13	109214002	109220510	1	loss	A	16.0191	somatic	0	0.0332033014154123	0.0660786995652766
13	112149110	112181650	2	neutral	AA	30.8581	germline	1	0.309097196380033	0.545482681211302
13	113261978	113265232	3	gain	AAA	28.0325	somatic	0	0.0832860048608083	0.270074056607273
13	113597140	113606902	2	neutral	AA	54.5681	somatic	0	0.103405260377873	0.168912785683312
13	114153574	114156828	1	loss	A	-1	somatic	0	0.12195671283542	0.331850901245898
13	114156828	114221908	2	neutral	AA	29.591	somatic	0	7.79283063888091e-08	1.49081936184903e-06
13	114228416	114296750	2	neutral	AA	14.0161	somatic	0	5.28065278749971e-12	2.86062284970967e-11
14	18658436	18694230	3	gain	AAB	6.33874	germline	1	0.000544076813313537	0.000706361152245982
14	20083688	20086942	1	loss	A	-1	germline	1	0.0852879213603087	0.273534775020096
14	21482908	21486162	1	loss	A	-1	somatic	0	0.111255731992415	0.315694472500191
14	23698882	23708644	2	neutral	AA	29.3495	germline	1	0.229865835981257	0.184935280557306
14	26904072	26907326	2	neutral	AA	100	somatic	0	0.128313695245815	0.341171351796725
14	27414950	27421458	2	neutral	AA	100	somatic	0	0.657264092062616	0.928618196461085
14	32976036	33015084	2	neutral	AA	93.0928	somatic	0	0.358861002872136	0.411832937799293
14	34957722	34964230	1	loss	A	-1	somatic	0	0.0283832324940399	0.0563195526295435
14	35136692	35146454	1	loss	A	-1	germline	1	0.00422283132138755	0.00682578930695155
14	35943684	35972970	2	neutral	AA	54.568	somatic	0	0.72985350355087	0.987837780155534
14	36194242	36200750	2	neutral	AA	100	somatic	0	0.0520739216480492	0.086555073064691
14	37290840	37303856	1	loss	A	-1	germline	1	0.033348121533968	0.0688167253893845
14	40144598	40147852	1	loss	A	-1	somatic	0	0.0866599062882111	0.275884567870255
14	41140322	41192386	1	loss	A	-1	germline	1	4.61774073010091e-11	3.08975067753181e-13
14	42516764	42523272	1	loss	A	-1	somatic	0	0.025163931838559	0.0577305486461633
14	46883632	46896648	2	neutral	AA	100	somatic	0	0.807282563222624	0.641888896729607
14	54244180	54247434	1	loss	A	-1	somatic	0	0.115058801912413	0.321509070603337
14	56157532	56219358	2	neutral	AA	100	germline	1	0.259988938831942	0.290264851606843
14	56749760	56753014	2	neutral	AA	100	somatic	0	0.386320598731756	0.627035902314691
14	58471126	58487396	2	neutral	AA	100	germline	1	0.301475853449309	0.468576443088044
14	60589480	60592734	1	loss	A	-1	somatic	0	0.0892294562660669	0.280247260316646
14	63599430	63618954	2	neutral	AA	18.1893	germline	1	0.302635520271335	0.258003050676057
14	70384020	70387274	2	neutral	AA	100	somatic	0	0.546468017240689	0.753843046471889
14	71737684	72024036	2	neutral	AA	15.183	somatic	0	0.00156020777388392	0.000959987812560237
14	75840978	75919074	2	neutral	AA	29.4286	somatic	0	0.648979382149749	0.821123203276107
14	79924748	79950780	2	neutral	AA	100	somatic	0	0.910121407141305	0.438249176795387
14	81310952	81320714	2	neutral	AA	100	somatic	0	0.0610885052626521	0.183130946704992
14	82674378	82680886	1	loss	A	-1	somatic	0	0.0329102208495119	0.0685485856226528
14	86006474	86162666	2	neutral	AA	100	somatic	0	0.419478189270284	0.238001261520911
14	89253966	89270236	2	neutral	AA	100	germline	1	0.975838342026063	0.835961298636809
14	94684892	94688146	2	neutral	AA	100	somatic	0	0.0881587753688229	0.278435467299103
14	95130690	95140452	2	neutral	AA	36.7141	somatic	0	0.26352799370268	0.549832771588739
14	99927086	99930340	4	gain	AABB	7.78839	somatic	0	0.08327804564658	0.270060233939722
14	101710278	101726548	1	loss	A	-1	somatic	0	0.00194452049659482	0.00865366825197211
14	103155054	103210372	2	neutral	AA	49.8955	germline	1	0.151166915569144	0.524802951162689
14	104235382	104254906	2	neutral	AA	8.58337	germline	1	0.241590971756597	0.463501039272606
14	104983802	104990310	2	neutral	AA	100	somatic	0	0.278631893759818	0.476668782665923
14	105032612	105065152	2	neutral	AA	36.3718	somatic	0	0.00315009155511374	0.00254088186742651
14	105107454	105130232	2	neutral	AA	36.3786	somatic	0	0.0141486895338727	0.0555498731939328
14	105270154	105283170	2	neutral	AA	36.3786	somatic	0	0.212962394660261	0.654950708749825
14	106864614	106880884	3	gain	-	-1	germline	1	0.000112675896690113	9.65040665052985e-05
15	0	17080246	9	gain	-	-1	germline	1	NA	NA
15	17080246	17083500	16	gain	-	-1	germline	1	0.0832684954028333	0.270043647420333
15	17083500	20340754	9	gain	-	-1	germline	1	0.588022435733702	0.89774229329594
15	20340754	20344008	19	gain	-	-1	germline	1	0.0832684954028333	0.270043647420333
15	20344008	20672662	9	gain	-	-1	somatic	0	4.2423600002251e-10	1.02281516589642e-11
15	22224820	22254106	6	gain	AAAABB	2.99276	somatic	0	2.21054152377763e-05	1.22941342497462e-05
15	25176198	25185960	1	loss	A	-1	germline	1	0.00562360875707863	0.00937402274917432
15	35517410	35520664	2	neutral	AA	100	somatic	0	0.0993781455886496	0.296989386020964
15	40805160	40850716	2	neutral	AA	100	somatic	0	0.32635172901722	0.550958046466256
15	48234042	48367456	2	neutral	AA	100	somatic	0	0.278274111956894	0.303713196883344
15	50017234	50036758	2	neutral	AA	71.4928	somatic	0	0.48363646051453	0.704240496397228
15	50176680	50192950	2	neutral	AA	100	somatic	0	0.630337327933403	0.632415188647356
15	51465264	51611694	2	neutral	AA	100	somatic	0	0.0152261454454228	0.109912020198126
15	58061122	58083900	2	neutral	AA	100	somatic	0	0.483539402913812	0.507387851483794
15	61393218	61406234	1	loss	A	-1	germline	1	0.00124712204830443	0.00160802584962905
15	65102778	65106032	2	neutral	AA	100	somatic	0	0.320288806277125	0.565601416230632
15	65838182	65877230	2	neutral	AA	36.4511	somatic	0	0.00655776208246015	0.0221708328653641
15	69385042	69391550	2	neutral	AA	54.5685	somatic	0	0.190964465110906	0.574445228593921
15	69964254	69983778	2	neutral	AA	76.5926	somatic	0	0.607051164214737	0.697441968946412
15	70810294	70849342	2	neutral	AA	54.5678	somatic	0	0.192664783854801	0.172436729546361
15	71415538	71422046	0	loss	-	-1	germline	1	0.0143070083989734	0.0366333215353419
15	72092370	72095624	1	loss	A	-1	germline	1	0.0833178478799481	0.270129352441743
15	73651036	73664052	2	neutral	AA	54.5679	somatic	0	0.92041850837416	0.672323960820433
15	77018926	77022180	2	neutral	AA	100	somatic	0	0.966809356764144	0.955741570452852
15	77038450	77041704	1	loss	A	-1	germline	1	0.0844240941223141	0.272044899815923
15	79501728	79508236	2	neutral	AA	36.3786	somatic	0	0.52588134706341	0.911932321110472
15	81971514	81981276	1	loss	A	-1	somatic	0	0.00568191961430127	0.00941871796992988
15	88486022	88489276	2	neutral	AA	100	somatic	0	0.996629700735787	0.963162277347845
15	89058726	89065234	1	loss	A	-1	germline	1	0.0222367200863783	0.0512667281986496
15	92130502	92163042	2	neutral	AA	36.4478	somatic	0	0.87345972508971	0.987772129005047
15	92693444	92696698	2	neutral	AA	100	somatic	0	0.147971212545803	0.368850009523319
15	93292180	93301942	2	neutral	AA	100	somatic	0	0.640987393033509	0.984966403745943
15	93471150	93474404	2	neutral	AA	100	somatic	0	0.322086569153199	0.567362668499296
15	93532976	93549246	2	neutral	AA	100	somatic	0	0.477828641329114	0.376327709494184
15	95319422	95338946	2	neutral	AA	26.9956	somatic	0	0.325667003127054	0.294296287442456
15	98319610	98322864	2	neutral	AA	100	somatic	0	0.838380033748137	0.913635118983793
15	99875022	99881530	1	loss	A	-1	germline	1	0.0262578778552326	0.0571618808184885
15	100206930	100245978	2	neutral	AA	29.9369	somatic	0	3.89353896379137e-05	6.06821264877988e-05
15	101287258	101300274	2	neutral	AA	54.5678	somatic	0	0.683835314329121	0.971810762837301
16	536910	540164	2	neutral	AA	100	somatic	0	0.1064550563091	0.308243598690086
16	676832	686594	2	neutral	AA	54.5678	somatic	0	0.436629361215969	0.363239738557049
16	816754	833024	2	neutral	AA	20.2051	somatic	0	0.00526011253220643	0.0499704862030377
16	846040	849294	4	gain	AABB	75.5594	germline	1	0.0832804333461504	0.270064380685763
16	1025010	1028264	5	gain	AAABB	100	germline	1	0.0832764538776745	0.270057469468182
16	1282076	1317870	2	neutral	AA	11.2473	somatic	0	0.285949120043748	0.310431196061239
16	6625144	6641414	2	neutral	AA	21.9647	somatic	0	0.337258238275265	0.456791251959175
16	7123006	7168562	2	neutral	AA	41.5175	somatic	0	0.051193642552045	0.113373827683901
16	9101438	9124216	2	neutral	AA	100	germline	1	0.523193928427251	0.630874375417833
16	11522414	11528922	2	neutral	AA	100	germline	1	0.302877499060863	0.57574734595086
16	12023530	12026784	2	neutral	AA	100	somatic	0	0.280968256629313	0.525979724518016
16	19315744	19318998	2	neutral	AA	100	somatic	0	0.221653780319625	0.46107595661308
16	19494714	19501222	2	neutral	AA	100	germline	1	0.20209204148229	0.348685701074356
16	20565280	20568534	1	loss	A	-1	germline	1	0.0838895079143972	0.27112054585454
16	21557750	21583782	4	gain	AABB	3.94501	germline	1	9.6459346450157e-07	2.25312102974939e-07
16	21713942	22023072	2	neutral	AA	22.1367	somatic	0	0.957941378106774	0.875195053904442
16	22615300	22654348	4	gain	AABB	5.66087	germline	1	1.97707543249212e-09	7.5624395634577e-11
16	22660856	22696650	4	gain	AAAB	4.22038	germline	1	9.23112909195208e-09	5.58575075082501e-10
16	22696650	22699904	3	gain	AAA	68.5157	germline	1	0.0832947607081611	0.270089262138047
16	23035066	23038320	1	loss	A	-1	germline	1	0.0937306552222972	0.287763137681973
16	28534326	28550596	2	neutral	AA	36.4216	somatic	0	0.650197334487955	0.876976289681375
16	28615676	28902028	2	neutral	AA	32.5391	somatic	0	0.2410608230133	0.349080340968659
16	34062872	34066126	24	gain	AAAAAAAAAAAAAAABBBBBBBBB	10.8941	germline	1	0.0832676995892363	0.270042265243951
16	34075888	34082396	2	neutral	AA	100	germline	1	0.110813573842746	0.155702822835743
16	34082396	34085650	15	gain	AAAAAAAAAABBBBB	50.4502	germline	1	0.0832684954028333	0.270043647420333
16	34085650	34095412	2	neutral	AA	11.3368	germline	1	0.00302616313049794	0.00559844589859815
16	34095412	34098666	10	gain	AAAAAAABBB	5.48629	germline	1	0.0832692912225914	0.270045029601879
16	34098666	34101920	3	gain	AAA	29.6348	germline	1	0.0832844129686684	0.270071292032449
16	34101920	34160492	2	neutral	AA	2.82821	germline	1	0.636716514322836	0.586913847294302
16	34160492	34163746	3	gain	AAB	2.20891	somatic	0	0.0832987408852638	0.270096173949515
16	34163746	34173508	2	neutral	AA	-1	germline	1	NA	NA
16	34173508	34176762	5	gain	AAABB	0.814378	somatic	0	0.0832764538776745	0.270057469468182
16	34176762	34193032	2	neutral	AA	-1	germline	1	NA	NA
16	34193032	34954468	2	neutral	AA	1.02042	germline	1	9.74284398644371e-25	0
16	35992494	36090114	2	neutral	AA	23.5501	germline	1	8.76984636837943e-06	0.000161056292609207
16	36122654	36125908	5	gain	-	-1	germline	1	0.0832764538776745	0.270057469468182
16	48474838	48478092	0	loss	-	-1	germline	1	0.0832669037818006	0.270040883072735
16	48966192	48969446	2	neutral	AA	100	somatic	0	0.484181442043289	0.707992310064949
16	50534620	50537874	2	neutral	AA	100	somatic	0	0.531893703681695	0.743478239887818
16	51712568	51767886	2	neutral	AA	66.4009	somatic	0	0.720794558612142	0.89761702270072
16	52994644	53010914	2	neutral	AA	28.8543	somatic	0	0.70089765460006	0.735998537752769
16	54569580	54576088	2	neutral	AA	54.8558	somatic	0	0.147419648550717	0.214364205783034
16	55275698	55282206	2	neutral	AA	100	somatic	0	0.990328865925402	0.918877787304983
16	57690166	57716198	2	neutral	AA	56.0129	germline	1	0.371652195801453	0.611108484904831
16	58611048	58617556	1	loss	A	-1	germline	1	0.0206703104999961	0.056178015079819
16	58916924	58920178	1	loss	A	-1	germline	1	0.0921882685628291	0.28520553919248
16	61015754	61019008	2	neutral	AA	100	somatic	0	0.917235807881773	0.941479130189789
16	62008224	62011478	2	neutral	AA	100	somatic	0	0.31249271253179	0.557944144244748
16	62180686	62187194	2	neutral	AA	100	germline	1	0.525405062807439	0.839510217091982
16	66023660	66049692	2	neutral	AA	44.9777	somatic	0	0.0974123543274972	0.113622252216822
16	70149732	70162748	4	gain	AABB	3.05409	germline	1	0.000532330475052905	0.000671230056453531
16	71832050	71835304	2	neutral	AA	100	somatic	0	0.278848611490902	0.523796682734388
16	72804996	72818012	2	neutral	AA	100	somatic	0	0.379135438198842	0.529267668639539
16	73830006	73833260	2	neutral	AA	100	somatic	0	0.256396150149559	0.499928957526193
16	76504794	76511302	1	loss	A	-1	somatic	0	0.0272393166140671	0.0547418554275914
16	78336796	78349812	1	loss	A	-1	germline	1	0.000834652275432026	0.00122492805618024
16	78883468	78886722	2	neutral	AA	100	somatic	0	0.17015798681875	0.398318113655755
16	79023390	79033152	2	neutral	AA	54.5686	somatic	0	0.459705586707581	0.904183371316585
16	80028876	80058162	2	neutral	AA	100	somatic	0	0.251451650225024	0.533133272441754
16	83071366	83087636	2	neutral	AA	100	somatic	0	0.308334980773465	0.337576792334056
16	84138678	84141932	2	neutral	AA	100	somatic	0	0.954108879564592	0.95231580837189
16	86416478	86419732	3	gain	AAB	23.6	somatic	0	0.0833186440817633	0.270130734943471
16	86842752	86846006	2	neutral	AA	100	somatic	0	0.116080867921403	0.323067874216078
16	87568394	87571648	2	neutral	AA	100	somatic	0	0.159813559629477	0.384792061197394
16	88079272	88082526	0	loss	-	-1	germline	1	0.0832669037818006	0.270040883072735
16	88420942	88430704	2	neutral	AA	36.3797	somatic	0	0.423065153645623	0.549908195041692
16	88817930	88840708	2	neutral	AA	100	somatic	0	0.656314746869291	0.724354991623997
16	89035948	89048964	2	neutral	AA	31.5169	somatic	0	0.0644194258221523	0.0852635894954721
16	89279998	89283252	2	neutral	AA	100	somatic	0	0.535773021714195	0.746273742934954
17	410004	793976	2	neutral	AA	15.1301	somatic	0	1.03151600099967e-07	6.94375963594673e-06
17	14285060	14288314	1	loss	A	-1	somatic	0	0.0847133983931499	0.272544113801228
17	21290922	21303938	4	gain	AABB	0.265569	germline	1	0.000532330475052905	0.00067120234193474
17	21853864	21857118	6	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
17	21857118	21860372	4	gain	-	-1	germline	1	0.0832772497590465	0.27005885170137
17	21860372	21886404	3	gain	-	-1	germline	1	1.01034105371077e-06	2.71026551201814e-07
17	21886404	21912436	1	loss	A	-1	germline	1	1.97810055160598e-06	1.47192396271478e-06
17	21912436	21967754	0	loss	-	-1	germline	1	1.54594700462707e-12	1.39666056497845e-13
17	21977516	21990532	11	gain	-	-1	germline	1	0.00270017349350164	0.00495800325951001
17	22123946	22156486	5	gain	AAABB	0.329061	germline	1	4.32581363737965e-08	4.1263517047696e-09
17	22156486	22159740	4	gain	AAAB	3.743	germline	1	0.0832772497590465	0.27005885170137
17	26783674	26796690	4	gain	-	-1	germline	1	0.000532401242613099	0.000671313206447088
17	26796690	26809706	3	gain	-	-1	germline	1	0.00053489252205882	0.000677157761695968
17	26812960	26819468	4	gain	-	-1	germline	1	0.014310022245084	0.0366374813735301
17	26819468	26822722	3	gain	-	-1	germline	1	0.0834054670349443	0.270281458593484
17	26822722	26825976	5	gain	-	-1	germline	1	0.083275658002464	0.270056087240159
17	26825976	26865024	3	gain	-	-1	germline	1	9.25796324666814e-09	5.63895596883413e-10
17	26865024	26868278	7	gain	-	-1	germline	1	0.0832740662705275	0.270053322799604
17	26868278	26878040	3	gain	-	-1	germline	1	0.00270269108165279	0.00496376407292409
17	26936612	26939866	18	gain	AAAAAAAAAAAABBBBBB	4.32745	germline	1	0.0832684954028333	0.270043647420333
17	53775604	53782112	1	loss	A	-1	somatic	0	0.0214959915913549	0.0533384628056655
17	66283980	66313266	2	neutral	AA	100	germline	1	0.26220975454814	0.478306052569871
17	73917864	73934134	3	gain	AAB	5.96715	germline	1	0.000107862813001479	9.11790471084251e-05
17	74975414	75089304	2	neutral	AA	27.2841	somatic	0	0.0226733817913092	0.0544297825752599
17	82583266	82586520	4	gain	AABB	6.8819	somatic	0	0.0832804333461504	0.270064380685763
17	83133192	83204780	2	neutral	AA	26.0301	somatic	0	1.44615984685065e-08	8.357648306756e-08
18	26181684	26188192	1	loss	A	-1	somatic	0	0.0291648542732873	0.0566493437502805
18	44397576	44400830	1	loss	A	-1	germline	1	0.0885796071506003	0.279148405371135
18	47736180	47778482	2	neutral	AA	27.4561	germline	1	0.884946377070337	0.910259086472216
18	49880566	49896836	2	neutral	AA	100	somatic	0	0.0410448061856728	0.0939510727641516
18	50710336	50778670	2	neutral	AA	36.3849	somatic	0	0.162992271475383	0.31512123370034
18	51898046	51901300	2	neutral	AA	100	somatic	0	0.250019442737261	0.492981606727401
18	55051172	55060934	2	neutral	AA	100	somatic	0	0.727919434211548	0.923456479145772
18	55122760	55204110	2	neutral	AA	66.2244	somatic	0	0.0501675647772991	0.134492022874041
18	57465640	57514450	2	neutral	AA	100	somatic	0	0.62786738430008	0.678568753643094
18	57712944	57732468	2	neutral	AA	27.4091	somatic	0	0.617338764065443	0.628396120772008
18	58464618	58467872	2	neutral	AA	100	somatic	0	0.367916306416221	0.610517124266643
18	60966944	61028770	2	neutral	AA	25.7706	somatic	0	0.604946146558303	0.909404863479652
18	63221966	63225220	2	neutral	AA	100	germline	1	0.09180576696204	0.284573359871944
18	64380390	64383644	2	neutral	AA	100	somatic	0	0.451107821514724	0.681969804077156
18	66550808	66554062	1	loss	A	-1	somatic	0	0.0834748186644318	0.270401804991425
18	74174930	74207470	2	neutral	AA	26.2047	somatic	0	0.982657924019531	0.793391009134739
18	75011208	75014462	2	neutral	AA	100	somatic	0	0.216872900955899	0.455538583859779
18	75590420	75596928	2	neutral	AA	27.284	germline	1	0.975496321801603	0.712363489850546
18	75658754	75662008	2	neutral	AA	100	somatic	0	0.690964670051796	0.844165121600571
18	78815134	78818388	2	neutral	AA	100	somatic	0	0.788558556465745	0.892709183979638
18	78876960	79124264	2	neutral	AA	22.1179	somatic	0	1.4430727566499e-06	3.40996752561384e-05
18	79124264	79199106	2	neutral	AA	54.5679	germline	1	1.70798280209252e-11	1.67406977169549e-10
18	79199106	79202360	4	gain	AABB	46.0205	germline	1	0.0832788415402752	0.270061616183238
19	445798	504370	2	neutral	AA	16.8516	somatic	0	0.862259058582972	0.962749420146642
19	1028264	1038026	2	neutral	AA	17.059	somatic	0	0.886660162465201	0.991028695036207
19	1864542	1884066	2	neutral	AA	15.5908	somatic	0	0.962373559600851	0.686579851211727
19	2167164	2297324	2	neutral	AA	42.0572	germline	1	0.0429284724745555	0.0282872931675225
19	7448406	7451660	6	gain	AAAABB	2.68595	somatic	0	0.083274862133415	0.270054705017299
19	7728250	7747774	2	neutral	AA	36.3786	somatic	0	0.344534338573963	0.270682520620727
19	7956030	7978808	2	neutral	AA	13.6789	somatic	0	0.358391418924524	0.20183965407518
19	8154524	8193572	2	neutral	AA	13.74	somatic	0	0.000552322128796617	0.00322990846125415
19	8873658	8915960	2	neutral	AA	1.28209	germline	1	0.0512928874667644	0.295157824107453
19	12583218	12589726	1	loss	A	-1	somatic	0	0.0144191472243351	0.0369712291262586
19	13383702	13409734	2	neutral	AA	21.9152	somatic	0	0.0362819619092435	0.0301089854270694
19	16071506	16074760	2	neutral	AA	100	somatic	0	0.622032405774404	0.803825861072785
19	16182142	16214682	2	neutral	AA	100	somatic	0	0.0017707505913588	0.00236128033591898
19	17548822	17552076	2	neutral	AA	100	somatic	0	0.432445992286486	0.666599171957746
19	18915502	18918756	2	neutral	AA	100	somatic	0	0.756215182666782	0.877724169734394
19	21053380	21219334	2	neutral	AA	21.6423	somatic	0	0.155913736404942	0.190473014232741
19	21310446	21577274	2	neutral	AA	12.888	germline	1	0.155050547097507	0.138721562823035
19	24330158	24405000	4	gain	AABB	0.188274	germline	1	2.07447236080687e-15	0
19	27275028	27278282	4	gain	AAAA	4.84448	germline	1	0.0832772497590465	0.27005885170137
19	27288044	27336854	2	neutral	AA	1.98801	germline	1	0.0104081176801877	0.00844872979053413
19	27336854	27340108	4	gain	AAAB	6.77651	germline	1	0.08327804564658	0.270060233939722
19	27340108	27343362	3	gain	AAB	10.0402	germline	1	0.0837327052286723	0.270848950318167
19	27343362	27346616	3	gain	AAB	3.41973	germline	1	0.0832828211011759	0.270068527478282
19	27346616	27379156	7	gain	AAAAABB	0.234082	germline	1	9.64066127696597e-07	2.25209791926417e-07
19	27379156	27382410	4	gain	AAAB	31.7047	germline	1	0.0832812292583305	0.270065762944772
19	27382410	27388918	7	gain	AAAAABB	0.987144	germline	1	0.0143081385256417	0.0366344559956807
19	27388918	27392172	5	gain	AAABB	3.30337	germline	1	0.083274862133415	0.270054705017299
19	27392172	27398680	7	gain	AAAAABB	0.729581	germline	1	0.0143083896755952	0.0366348341559578
19	27750112	27753366	2	neutral	AA	100	somatic	0	0.145783238639754	0.365849696154234
19	29904260	29988864	2	neutral	AA	100	somatic	0	0.218277911144467	0.261743454413925
19	30795856	30799110	1	loss	A	-1	germline	1	0.0832788415402752	0.270061616183241
19	31004112	31023636	2	neutral	AA	15.8379	somatic	0	0.500279169647588	0.651468043911203
19	34391526	34394780	5	gain	AAABB	2.49863	germline	1	0.0832764538776745	0.270057469468182
19	35361218	35370980	1	loss	A	-1	germline	1	0.0051823963068455	0.00875835415143433
19	35927414	35930668	2	neutral	AA	100	somatic	0	0.197327061836913	0.432298546482571
19	38006720	38009974	2	neutral	AA	100	somatic	0	0.515559693460753	0.731659641308977
19	38374422	38390692	2	neutral	AA	54.5679	somatic	0	0.869281436065104	0.862165441042321
19	39734594	39737848	2	neutral	AA	100	somatic	0	0.298466294890032	0.54391746107082
19	39864754	39868008	2	neutral	AA	100	somatic	0	0.209886098536727	0.447332106213654
19	47482368	47485622	2	neutral	AA	100	somatic	0	0.1855526918301	0.417825222475381
19	51631218	51644234	1	loss	A	-1	germline	1	0.000960887983862808	0.00149766196040924
19	52701784	52721308	2	neutral	AA	100	somatic	0	0.727011109220354	0.510397851451611
19	53017422	53046708	3	gain	AAB	2.66655	germline	1	9.66239297519826e-07	2.26160223437688e-07
19	53801636	53804890	2	neutral	AA	100	somatic	0	0.958681373887744	0.953566594857562
19	53869970	53882986	2	neutral	AA	23.5511	somatic	0	0.976392602202666	0.938469427034069
20	65080	68334	6	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
20	1288584	1291838	2	neutral	AA	100	somatic	0	0.336887341185655	0.581608937385211
20	1610730	1613984	0	loss	-	-1	germline	1	0.0832669037818006	0.270040883072735
20	7334516	7350786	2	neutral	AA	35.6911	somatic	0	0.19073517610081	0.356204504820532
20	7617614	7637138	2	neutral	AA	100	somatic	0	0.559168692283482	0.78434646707632
20	13845770	13901088	2	neutral	AA	35.141	germline	1	0.91242334452013	0.546827415463401
20	15850234	15912060	2	neutral	AA	36.4132	somatic	0	0.666233350331973	0.885913065626753
20	16764608	16777624	2	neutral	AA	100	somatic	0	0.54836452367335	0.158313730814339
20	17656204	17662712	2	neutral	AA	21.1325	somatic	0	0.290899944580736	0.701999793455964
20	18414386	18420894	2	neutral	AA	54.568	somatic	0	0.32370706642079	0.684395379580997
20	19881940	19891702	2	neutral	AA	100	somatic	0	0.410584057306275	0.715016601593255
20	20301706	20311468	2	neutral	AA	54.5693	somatic	0	0.650932717336285	0.991891079659199
20	21238858	21375526	2	neutral	AA	18.1498	somatic	0	0.0244960404655207	0.0166504279642024
20	22081644	22084898	1	loss	A	-1	somatic	0	0.0832788415402752	0.270061616183241
20	22084898	22345218	2	neutral	AA	50.9878	somatic	0	0.179364405474969	0.167589165896953
20	24167458	24180474	2	neutral	AA	100	somatic	0	0.0365777861845358	0.107728110002623
20	24222776	24239046	2	neutral	AA	100	somatic	0	0.251451649414307	0.525809789569932
20	25856284	25869300	2	neutral	AA	2.6658	germline	1	0.213529982339082	0.278605785119536
20	26324860	26354146	2	neutral	AA	19.445	somatic	0	0.00132134976309844	0.00743600022201563
20	26354146	26363908	1	loss	A	-1	germline	1	0.00539338780066287	0.0094159619253672
20	28781630	28788138	8	gain	-	-1	germline	1	0.0143080129521232	0.0366344559956807
20	28804408	28872742	10	gain	-	-1	germline	1	4.5951541163467e-06	1.66398901757514e-06
20	29263222	29266476	11	gain	-	-1	germline	1	0.0832684954028333	0.270043647420333
20	29266476	29269730	4	gain	-	-1	germline	1	0.08327804564658	0.270060233939722
20	29276238	29312032	3	gain	-	-1	germline	1	4.52990430809714e-08	5.48826406543412e-09
20	30812126	30815380	7	gain	-	-1	germline	1	0.0832716787188335	0.270049176177503
20	30939032	30942286	6	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
20	30994350	31000858	3	gain	-	-1	somatic	0	0.0143239685694924	0.0366688825699516
20	31065938	31069192	49	gain	-	-1	germline	1	0.0832669037818006	0.270040883072733
20	31163558	31166812	7	gain	-	-1	germline	1	0.0832740662705275	0.270053322799604
20	31166812	31183082	4	gain	-	-1	germline	1	0.000107594127664609	9.08572867781565e-05
20	31183082	31189590	20	gain	-	-1	germline	1	0.0143070083989734	0.0366329433887254
20	31189590	31192844	4	gain	-	-1	germline	1	0.0832812292583305	0.270065762944772
20	31225384	31231892	5	gain	AAAAA	1.98822	germline	1	0.0143093943142974	0.0366367250085748
20	31231892	31238400	4	gain	AAAB	12.64	germline	1	0.0143102734242046	0.036637859561131
20	31238400	31244908	32	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	29.3726	germline	1	0.0143068828342043	0.0366325652455248
20	40974368	41189132	2	neutral	AA	100	somatic	0	0.795314875270112	0.925394772437872
20	43678442	43697966	2	neutral	AA	24.2269	somatic	0	0.601992536627499	0.715000247244872
20	49581198	49600722	2	neutral	AA	100	somatic	0	0.115038915392882	0.168456407915436
20	49616992	49620246	3	gain	AAB	19.76	germline	1	0.0832828211011759	0.270068527478282
20	52584640	52646466	2	neutral	AA	100	somatic	0	0.678807456750167	0.434243447643307
20	53658460	53664968	2	neutral	AA	100	somatic	0	0.426698903390625	0.840782314132638
20	56691188	56697696	2	neutral	AA	100	somatic	0	0.312147822800693	0.337487177534244
20	57185796	57218336	2	neutral	AA	13.2748	somatic	0	0.964664906721258	0.92680354880644
20	61045040	61048294	4	gain	AABB	35.7105	germline	1	0.08327804564658	0.270060233939722
20	63082044	63091806	2	neutral	AA	9.9473	somatic	0	0.0561444035045663	0.162444116031615
20	63485540	63693796	2	neutral	AA	17.9483	germline	1	0.00275553045155785	0.00649664113015813
20	64087530	64090784	4	gain	AAAA	14.9334	germline	1	0.083279637440132	0.270062998431919
21	8990802	8997310	9	gain	AAAAABBBB	10.6688	germline	1	0.0143077618080029	0.0366344559956807
21	9735968	9765254	5	gain	AAABB	2.86376	germline	1	0.00270083701319735	0.00495869423337914
21	10650342	10653596	5	gain	AAAAB	10.1633	germline	1	0.0832764538776745	0.270057469468182
21	10653596	10660104	8	gain	AAAAAABB	100	germline	1	0.0143081385256417	0.0366348341559578
21	10660104	10666612	5	gain	AAAAB	9.59365	germline	1	0.0143095198985102	0.0366367250085748
21	10666612	10669866	7	gain	AAAAABB	5.08386	germline	1	0.0832724745632368	0.270050558379706
21	10669866	10689390	5	gain	AAAAB	2.86596	germline	1	0.000107577355816581	9.08385312261561e-05
21	10689390	10692644	9	gain	AAAAAABBB	92.0098	germline	1	0.0832708828805915	0.270047793980464
21	10692644	10695898	48	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBB	100	germline	1	0.0832669037818006	0.270040883072733
21	10695898	10702406	5	gain	AAAAA	7.78219	germline	1	0.0143093943142974	0.0366367250085748
21	10702406	10708914	7	gain	AAAAABB	2.28465	germline	1	0.0143082641001323	0.0366348341559578
21	10708914	10738200	5	gain	AAAAA	0.401547	germline	1	2.03652756715813e-07	3.04861467181894e-08
21	14034502	14037756	2	neutral	AA	100	germline	1	0.239329882842176	0.481168093695381
21	15772138	15817694	2	neutral	AA	15.6748	germline	1	0.152432517294161	0.301067312466119
21	16969610	16972864	1	loss	A	-1	somatic	0	0.094229868732169	0.288587401755422
21	17552076	17581362	2	neutral	AA	100	somatic	0	0.869560758638827	0.997857825563405
21	21515448	21551242	2	neutral	AA	100	somatic	0	0.144680838695572	0.335198171305616
21	21554496	21564258	2	neutral	AA	100	somatic	0	0.634888029994834	0.89556971276884
21	31179828	31183082	2	neutral	AA	100	somatic	0	0.256024555242781	0.49952324736587
21	31573562	31576816	2	neutral	AA	100	somatic	0	0.382873486166583	0.623969540283217
21	31781818	31850152	2	neutral	AA	32.0214	somatic	0	0.00437813869637741	0.014382933255278
21	32357776	32364284	2	neutral	AA	54.568	somatic	0	0.872213295443551	0.982012002059523
21	32562778	32679922	2	neutral	AA	100	somatic	0	0.21806890878576	0.627340572059224
21	33044370	33073656	2	neutral	AA	27.2839	somatic	0	0.0797745982750294	0.18042892524028
21	34713672	34720180	2	neutral	AA	36.7139	somatic	0	0.0671392101444297	0.115507984003622
21	35728920	35842810	2	neutral	AA	37.5727	somatic	0	0.0176366486762368	0.0604342584388816
21	36158448	36164956	2	neutral	AA	100	somatic	0	0.314998111611585	0.525726650158447
21	38338628	38488312	2	neutral	AA	29.757	somatic	0	0.321725676295055	0.348809633466124
21	39298558	39301812	2	neutral	AA	100	somatic	0	0.852725761070738	0.919176590371972
21	41439690	41442944	2	neutral	AA	100	somatic	0	0.557069596429902	0.761209929216384
21	41804138	41807392	4	gain	AAAA	16.3162	germline	1	0.0832804333461504	0.270064380685763
21	43333518	43340026	3	gain	AAB	14.9181	germline	1	0.0143456027735266	0.0367287234220512
21	44599324	44602578	2	neutral	AA	54.5678	germline	1	0.185525224405159	0.417799345561904
21	45022344	45035360	2	neutral	AA	36.3787	germline	1	0.0533553681250416	0.155497900955792
21	45041868	45054884	2	neutral	AA	72.6799	germline	1	0.0212329774717893	0.0362918767833719
21	45054884	45058138	3	gain	AAB	39.2778	somatic	0	0.0832828211011759	0.270068527478282
21	45250124	45308696	2	neutral	AA	18.7329	germline	1	0.013772815510697	0.150130073250303
21	45552746	45556000	1	loss	A	-1	somatic	0	0.103213337502863	0.303122182304886
21	45559254	45582032	2	neutral	AA	45.6047	germline	1	0.00990753148591155	0.00904351540091675
21	45647112	45650366	2	neutral	AA	100	somatic	0	0.233461257269413	0.474575084064287
22	10728438	10731692	11	gain	-	-1	somatic	0	0.0832684954028333	0.270043647420333
22	11620034	11629796	4	gain	AABB	21.2842	somatic	0	0.0143106502001776	0.0366389941444273
22	20529486	20532740	2	neutral	AA	100	somatic	0	0.664870784159661	0.829477636176538
22	22348472	22367996	2	neutral	AA	1.3574	somatic	0	0.902533076418963	0.653179475155075
22	24069838	24834528	2	neutral	AA	10.168	somatic	0	0.0447019341430365	0.0523613933212757
22	26809706	26822722	2	neutral	AA	100	somatic	0	0.806494210636811	0.99707546343595
22	29120046	29123300	4	gain	AAAB	10.6503	germline	1	0.0832804333461504	0.270064380685763
22	31381576	31384830	1	loss	A	-1	somatic	0	0.0880837967442075	0.278308295563805
22	36750676	36753930	1	loss	A	-1	germline	1	0.123161706554282	0.333632800171858
22	37398222	37407984	2	neutral	AA	100	somatic	0	0.162133616060491	0.239972539459607
22	38771410	38869030	2	neutral	AA	22.1794	somatic	0	0.47506284671674	0.517159277211495
22	38963396	38989428	1	loss	A	-1	germline	1	1.10040455977317e-05	3.89529617339512e-06
22	39418956	39422210	2	neutral	AA	100	somatic	0	0.837489411046699	0.913308714270329
22	40710794	40714048	2	neutral	AA	100	somatic	0	0.564456331060881	0.766280306536126
22	42367080	42376842	2	neutral	AA	100	somatic	0	0.803297166623	0.77263015519208
22	42520018	42552558	3	gain	AAB	24.1922	germline	1	0.000109075726148172	9.42647378046058e-05
22	42559066	42565574	1	loss	A	-1	germline	1	0.016656892121409	0.0422258366139601
22	43473440	43502726	2	neutral	AA	16.5361	somatic	0	0.927916433814028	0.795996068809481
22	44947502	45054884	2	neutral	AA	13.4906	somatic	0	0.985496059956371	0.880280476342309
22	46288150	46304420	2	neutral	AA	36.4058	somatic	0	0.46693358367388	0.355102232891589
22	46877124	46899902	2	neutral	AA	33.9796	somatic	0	0.303647911996628	0.200662674318451
22	49203734	49246036	2	neutral	AA	57.1199	germline	1	7.95679565574813e-05	0.000165383869113134
22	49987948	50000964	2	neutral	AA	27.2842	somatic	0	0.733649433650693	0.867068986310618
22	50642002	50645256	4	gain	AAAA	22.2788	germline	1	0.08327804564658	0.270060233939722
X	3524082	3527336	2	gain	-	-1	germline	1	0.45627540752905	0.686048714760031
X	26084064	26087318	0	loss	-	-1	somatic	0	0.083266107980526	0.270039500906681
X	50225490	50228744	0	loss	-	-1	somatic	0	0.083266107980526	0.270039500906681
X	77864966	77868220	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
X	129366024	129369278	0	loss	-	-1	somatic	0	0.083266107980526	0.270039500906681
X	131871604	131874858	0	loss	-	-1	germline	1	0.0832653121854124	0.270038118745792
X	145339910	145343164	0	loss	-	-1	germline	1	0.083266107980526	0.270039500906681
X	155687630	155690884	0	loss	-	-1	germline	1	0.0832669037818006	0.270040883072735
Y	3846228	3852736	2	gain	AB	1.02263	somatic	0	0.34657823889843	0.314686922315671
Y	10666612	10669866	6	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
Y	10754470	10764232	5	gain	-	-1	germline	1	0.0027007454843824	0.00495869423337914
Y	10764232	10767486	2	gain	-	-1	germline	1	0.0846762840287508	0.272480110439889
Y	10767486	10770740	4	gain	-	-1	germline	1	0.0832764538776745	0.270057469468182
Y	10770740	10773994	3	gain	-	-1	germline	1	0.0832875967775959	0.270076821202754
Y	10773994	10777248	5	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
Y	10777248	10783756	2	gain	-	-1	germline	1	0.136841783255666	0.170507483686055
Y	10783756	10790264	4	gain	-	-1	germline	1	0.0143102734242046	0.036637859561131
Y	10790264	10793518	2	gain	-	-1	germline	1	0.0870040233759606	0.276474648577457
Y	10793518	10796772	6	gain	-	-1	germline	1	0.083274862133415	0.270054705017299
Y	10796772	10800026	3	gain	-	-1	germline	1	0.0832836170318412	0.270069909752784
Y	10800026	10803280	5	gain	-	-1	germline	1	0.083275658002464	0.270056087240159
Y	10803280	10806534	2	gain	-	-1	germline	1	0.215921880993606	0.454443823474093
Y	10806534	10809788	5	gain	-	-1	germline	1	0.0832764538776745	0.270057469468182
Y	10813042	10816296	2	gain	-	-1	germline	1	0.138191069502299	0.355283408278326
Y	10819550	10826058	3	gain	-	-1	germline	1	0.0143189414858294	0.0366628274958537
Y	10826058	10845582	2	gain	-	-1	germline	1	0.580805847680855	0.131170711783921
Y	10845582	10848836	4	gain	-	-1	germline	1	0.08327804564658	0.270060233939722
Y	10848836	10887884	2	gain	-	-1	germline	1	0.800586242927571	0.390863779463475
Y	10923678	10926932	5	gain	-	-1	germline	1	0.083275658002464	0.270056087240159
Y	10926932	10933440	2	gain	-	-1	germline	1	0.779980982904975	0.700331060113594
Y	10933440	10936694	5	gain	-	-1	germline	1	0.083275658002464	0.270056087240159
Y	10936694	10985504	3	gain	-	-1	germline	1	0.000248373363597653	7.14006122798372e-05
Y	10985504	10988758	15	gain	-	-1	germline	1	0.0832684954028333	0.270043647420333
Y	10988758	10998520	3	gain	-	-1	germline	1	0.00425482292262764	0.0111997053380323
Y	10998520	11001774	8	gain	-	-1	germline	1	0.0832708828805915	0.270047793980464
Y	11005028	11040822	2	gain	AA	14.8626	germline	1	0.436048238062471	0.618359583309836
Y	11291380	11307650	31	gain	AAAAAAAAAAAAAAAAAAAAABBBBBBBBBB	8.70837	germline	1	0.000107531466530143	9.08127483475463e-05
Y	11314158	11333682	9	gain	AAAAAABBB	0.580319	germline	1	0.00270026500460318	0.00495815680163081
Y	11685114	11688368	4	gain	AABB	11.7542	germline	1	0.0832772497590465	0.27005885170137
Y	11688368	11691622	8	gain	AAAAAABB	100	germline	1	0.0832716787188335	0.270049176177503
Y	11691622	11717654	2	gain	AA	3.82185	germline	1	0.000131258648601918	8.93406504542948e-05
Y	11717654	11720908	3	gain	AAA	8.90058	germline	1	0.083289984698992	0.270080968134707
Y	11720908	11724162	43	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBB	100	germline	1	0.0832676995892363	0.270042265243951
Y	11724162	11730670	2	gain	AB	33.4129	germline	1	0.211035981035979	0.533348044184277
Y	11730670	11737178	3	gain	AAB	13.8272	germline	1	0.0143116549788876	0.0366397505503698
Y	11737178	11743686	2	gain	AA	4.33895	germline	1	0.585366468515659	0.914562264347117
Y	11743686	11746940	4	gain	AAAB	7.05905	germline	1	0.0832764538776745	0.270057469468182
Y	11746940	11750194	10	gain	AAAAAAABBB	11.3626	germline	1	0.0832692912225914	0.270045029601879
Y	26637244	26640498	7	gain	AAAABBB	4.13632	germline	1	0.0832740662705275	0.270053322799604
Y	56827856	56837618	31	gain	AAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	16.0103	germline	1	0.00270005910860983	0.00495784972174795
Y	56837618	56844126	9	gain	AAAAAAAAB	23.5574	germline	1	0.0143076362374009	0.0366340778388189
