chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	819720	905256	2	neutral	AA	3.8966	somatic	0	0.64871265016165	0.93453585019556
1	1047816	1057320	2	neutral	AA	36.3786	somatic	0	0.932957398340439	0.982084332306591
1	5666760	5676264	4	gain	AABB	1.076	germline	1	0.000532892714091702	0.00067251596935991
1	9915048	9964944	2	neutral	AA	33.3851	somatic	0	0.133908086994476	0.0270228216841549
1	16608240	16636752	8	gain	AAAAABBB	7.84401	germline	1	0.000107551143812014	9.08315387551095e-05
1	16719912	16943256	3	gain	AAB	0.616689	germline	1	9.21760062291879e-11	1.4059864383853e-12
1	26131248	26138376	1	loss	A	-1	somatic	0	0.0107689844522028	0.0356223426234055
1	28623672	28728216	2	neutral	AA	18.7823	somatic	0	2.6794335383994e-05	0.00103016438791448
1	31429728	31432104	5	gain	AAAAA	3.88296	germline	1	0.0832749828291328	0.270055100839201
1	45103608	45122616	2	neutral	AA	36.3786	somatic	0	0.119007107906404	0.195124062007381
1	46255968	46279728	2	neutral	AA	36.3786	somatic	0	0.170757102953631	0.347969145511011
1	55662552	55667304	0	loss	-	-1	germline	1	0.0143086307094702	0.036637683927241
1	68229216	68336136	2	neutral	AA	34.4284	somatic	0	0.470548641055517	0.526513393454632
1	72299304	72346824	1	loss	A	-1	germline	1	3.22300081271389e-13	6.66133814775094e-16
1	78814296	78819048	2	neutral	AA	100	somatic	0	0.123816735582331	0.339367765186083
1	79783704	79831224	2	neutral	AA	54.5678	somatic	0	0.361710327792114	0.391199688964157
1	89009712	89014464	1	loss	A	-1	somatic	0	0.0207100959741088	0.0564574712091753
1	105473016	105480144	1	loss	A	-1	somatic	0	0.00367799384529824	0.0074479340101451
1	108566568	108616464	2	neutral	AA	100	germline	1	0.00159284891476253	0.00535143466807342
1	125067888	125075016	3	gain	-	-1	germline	1	0.00270733495762618	0.00497067263361251
1	125079768	125082144	9	gain	-	-1	germline	1	0.0832691679949272	0.270045001780499
1	125082144	125084520	4	gain	-	-1	germline	1	0.0832778903695833	0.270060150471935
1	125162928	125165304	5	gain	-	-1	germline	1	0.0832749828291328	0.270055100839201
1	151393968	151422480	2	neutral	AA	55.6317	somatic	0	0.703165760958771	0.682418359186657
1	152106768	152156664	2	neutral	AA	9.09467	somatic	0	0.0172844135254719	0.0204635511397793
1	154454256	154532664	2	neutral	AA	24.1335	somatic	0	0.0730801997992458	0.0162713565475727
1	155827584	155844216	2	neutral	AA	100	somatic	0	0.243417341118857	0.526227027617523
1	158897376	158902128	1	loss	A	-1	somatic	0	0.030870431848661	0.0894826078469115
1	169259112	169273368	1	loss	A	-1	germline	1	9.46510495951067e-05	4.38548401083816e-05
1	170318808	170387712	2	neutral	AA	36.3786	somatic	0	0.0359861268839143	0.216071512672187
1	207367776	207372528	0	loss	-	-1	germline	1	0.0143124848101276	0.0366492910899956
1	219257280	219290544	2	neutral	AA	54.5678	somatic	0	0.136536891116111	0.281766753829783
1	224011656	224014032	10	gain	AAAAAAAAAA	1.87033	germline	1	0.0832685865295972	0.270043991889792
1	228067488	228072240	1	loss	A	-1	somatic	0	0.0143353529345536	0.0366943684138801
1	229676040	229685544	1	loss	A	-1	somatic	0	0.00136143362983814	0.00168456946712825
1	230925816	231013728	2	neutral	AA	2.19298	germline	1	0.00280843416171204	0.0090466162859365
1	234777312	234782064	4	gain	AABB	3.94455	germline	1	0.0143107411749859	0.0366387892327243
1	236095992	236098368	6	gain	AAAABB	18.7853	germline	1	0.0832744013309107	0.270054090920925
2	907632	912384	3	gain	-	-1	somatic	0	0.0143978760504574	0.0368962879831807
2	3179088	3181464	8	gain	-	-1	germline	1	0.083270912410652	0.270048031469162
2	34473384	34504272	1	loss	A	-1	germline	1	1.78484228828468e-09	6.2955307633672e-11
2	35751672	35765928	1	loss	A	-1	germline	1	6.161542061106e-05	4.05087106488677e-05
2	89772408	89824680	3	gain	-	-1	somatic	0	2.66234745268302e-14	2.77555756156289e-15
2	89824680	89827056	8	gain	-	-1	germline	1	0.0832697494635463	0.270046011673963
2	89827056	89841312	28	gain	-	-1	germline	1	2.20943042125253e-05	1.2290093114653e-05
2	89841312	89850816	3	gain	-	-1	germline	1	0.000534113468691011	0.000672901513937063
2	89850816	90209592	1	loss	A	-1	somatic	0	3.01349166054218e-10	4.11115586018695e-12
2	91411848	91414224	4	gain	-	-1	somatic	0	0.0832819610643673	0.270067220073552
2	126916416	126921168	1	loss	A	-1	somatic	0	0.0205124470413621	0.055793751105613
2	146104992	146119248	1	loss	A	-1	germline	1	6.46270851249415e-05	4.24551732636225e-05
2	164996568	165008448	1	loss	A	-1	germline	1	0.000213718265698391	0.000212132064902559
2	179202672	179212176	1	loss	A	-1	germline	1	0.00128737262408124	0.00159000599690429
2	207486576	207493704	1	loss	A	-1	germline	1	0.00595176781630171	0.00874359642436418
2	226299744	226306872	1	loss	A	-1	somatic	0	0.00493705190086264	0.00779786391487103
2	227376072	227392704	3	gain	-	-1	germline	1	5.79811557599254e-06	4.56297162931829e-06
2	239142024	239144400	2	neutral	AA	100	somatic	0	0.115292180360789	0.321867894415337
2	239814432	239819184	3	gain	AAB	7.17185	somatic	0	0.0783109538671193	0.252741668242871
2	240042528	240052032	2	neutral	AA	100	somatic	0	0.927128362758505	0.873290084608206
2	240786216	240850368	2	neutral	AA	41.833	somatic	0	0.151812174537819	0.0652988714320041
2	241256664	241266168	2	neutral	AA	100	germline	1	0.828019038178789	0.924626385266708
2	241306560	241451496	2	neutral	AA	46.5419	germline	1	0.0324838277729707	0.0642053682864721
2	241456248	241589304	2	neutral	AA	6.08976	germline	1	0.415519117348054	0.327354916291677
2	241589304	241591680	5	gain	AAABB	2.89319	germline	1	0.0832749828291328	0.270055100839201
2	241591680	241598808	2	neutral	AA	33.9755	germline	1	0.531272924756277	0.504415243827186
2	241693848	241760376	2	neutral	AA	5.74625	somatic	0	0.670182196412923	0.833764650883712
3	981288	1002672	2	neutral	AA	46.9393	germline	1	0.855472188589419	0.733237680178634
3	11164824	11169576	2	neutral	AA	54.5678	somatic	0	0.385527116195794	0.743680459604575
3	14826240	14933160	2	neutral	AA	27.2847	somatic	0	0.345872588007506	0.259219194664128
3	15957216	16038000	2	neutral	AA	65.1446	somatic	0	0.0102512373093588	0.100078033869794
3	27430920	27445176	2	neutral	AA	100	somatic	0	0.713199638143433	0.830636655753894
3	34663464	34668216	2	neutral	AA	100	somatic	0	0.658189134823295	0.824282935930353
3	35761176	35763552	3	gain	-	-1	germline	1	0.0834309429583263	0.270325858316928
3	35763552	35896608	3	gain	AAB	0.80424	germline	1	1.79696240030279e-34	0
3	35896608	35898984	3	gain	AAB	25.6128	germline	1	0.083535533555541	0.270507821526947
3	49451688	49501584	2	neutral	AA	100	somatic	0	0.277306383101549	0.206659649955445
3	58580280	58587408	2	neutral	AA	100	somatic	0	0.450157144860401	0.787245191972322
3	66487608	66504240	2	neutral	AA	100	germline	1	0.443135251798946	0.512706093210145
3	68690160	68699664	1	loss	A	-1	germline	1	0.00149180050331213	0.00160698995799868
3	75670848	75932208	2	neutral	AA	3.1621	somatic	0	0.000801250515346453	0.020264744703327
3	84854088	84951504	2	neutral	AA	21.8308	somatic	0	0.969640720212056	0.895055860998684
3	85198608	85792608	2	neutral	AA	16.062	somatic	0	7.82426605126491e-12	3.88621357316765e-11
3	90304632	90328392	2	neutral	AA	6.94019	somatic	0	0.352560835056282	0.568906666967042
3	90390168	90413928	2	neutral	AA	1.20591	somatic	0	0.145522949733208	0.092854091236908
3	90442440	90508968	2	neutral	AA	27.2011	somatic	0	0.342890682069971	0.114540025718041
3	90710928	93797352	2	neutral	AA	13.1162	germline	1	0.0928083657260099	0.0745403152847934
3	94671720	94678848	2	neutral	AA	100	somatic	0	0.373706553031689	0.43400494881335
3	98190576	98195328	2	neutral	AA	100	germline	1	0.955367802936059	0.736963745557313
3	99178992	99183744	1	loss	A	-1	germline	1	0.016621238392324	0.0436802656002039
3	113313816	113335200	2	neutral	AA	54.5681	somatic	0	0.00511662636616871	0.0109693255967223
3	119598336	119736144	2	neutral	AA	33.2716	somatic	0	0.00357486008580097	0.02972681568722
3	128776824	128867112	2	neutral	AA	100	germline	1	0.117296852357362	0.146362679554742
3	146318832	146325960	2	neutral	AA	54.5678	somatic	0	0.559099506117565	0.452203054857454
3	148934808	148979952	2	neutral	AA	100	somatic	0	0.101556816398443	0.0277989492994477
3	151541280	151548408	2	neutral	AA	54.5678	somatic	0	0.253172133867856	0.406730789893752
3	152783928	152793432	2	neutral	AA	100	germline	1	0.0985980482979871	0.171195719218311
3	153382680	153401688	2	neutral	AA	36.3786	somatic	0	0.755852251322613	0.758807313082175
3	155012616	155081520	2	neutral	AA	36.3786	somatic	0	0.515890568895431	0.656183727687508
3	156521376	156540384	2	neutral	AA	36.6076	somatic	0	0.142347728973618	0.279609599895839
3	158189328	158208336	2	neutral	AA	100	somatic	0	0.639184710311328	0.89162122548914
3	175614912	175619664	2	neutral	AA	54.5698	somatic	0	0.0616358998061967	0.130448544245578
3	180077040	180124560	2	neutral	AA	41.2048	germline	1	0.550299111145278	0.425758860926221
3	182215440	182403144	2	neutral	AA	13.9872	somatic	0	0.00479237387438925	0.0154366196127365
3	191068416	191322648	2	neutral	AA	20.9636	somatic	0	0.069437221704815	0.0896176277772913
3	191807352	191854872	2	neutral	AA	27.2839	somatic	0	0.703481646009614	0.84750654453555
4	1599048	1641816	2	neutral	AA	11.8065	somatic	0	0.1130632612247	0.109908865301242
4	6194232	6201360	2	neutral	AA	100	somatic	0	0.994125063173797	0.988185587269174
4	6510240	6512616	4	gain	AAAB	100	germline	1	0.0832819610643673	0.270067220073552
4	6576768	6591024	2	neutral	AA	10.0443	somatic	0	0.0179861403641287	0.0935753952664287
4	10953360	11003256	2	neutral	AA	56.7762	somatic	0	0.00469465128131902	0.0159398765553654
4	15465384	15484392	2	neutral	AA	100	somatic	0	0.00629854512856733	0.021289287672182
4	18352224	18537552	2	neutral	AA	100	somatic	0	0.403657510337748	0.127049823849439
4	26285688	26295192	1	loss	A	-1	somatic	0	0.00187655944372999	0.00261536810547291
4	28509624	28877904	2	neutral	AA	47.1805	somatic	0	6.11060141075782e-05	0.000406916872478624
4	40294584	40296960	5	gain	AAABB	5.20882	germline	1	0.0832749828291328	0.270055100839201
4	49646520	49656024	18	gain	AAAAAAAAAAAAABBBBB	100	germline	1	0.0143067040024792	0.0366324341246045
4	51815808	51818184	2	neutral	AA	70.3866	somatic	0	0.25923697666519	0.50300291176366
4	56384856	56434752	2	neutral	AA	71.4027	somatic	0	0.659830182622293	0.272766307861298
4	57183192	57233088	3	gain	AAB	4.00032	germline	1	9.64635447604131e-15	0
4	58972320	59015088	2	neutral	AA	54.8373	somatic	0	0.184187369895879	0.318248613007926
4	61828272	62343864	2	neutral	AA	14.8459	somatic	0	4.00268707610401e-08	7.98691057735113e-09
4	63828864	63850248	1	loss	A	-1	germline	1	4.17658126755213e-06	9.08665902965566e-07
4	64629576	64648584	2	neutral	AA	36.3971	somatic	0	0.0559658591600263	0.0920582018143503
4	68521464	68530968	2	neutral	AA	54.5678	somatic	0	0.236462678363853	0.156047361100518
4	74917656	74924784	2	neutral	AA	100	somatic	0	0.373889405094338	0.63987915909436
4	75868056	75875184	2	neutral	AA	100	somatic	0	0.880722849583992	0.651350002691655
4	76457304	76519080	2	neutral	AA	35.5525	somatic	0	0.135471641160922	0.207272184048477
4	77778360	77882904	2	neutral	AA	100	somatic	0	0.919150867954316	0.684754947405472
4	81834192	81848448	2	neutral	AA	100	somatic	0	0.330935458879666	0.179756161968393
4	87992784	88009416	2	neutral	AA	100	germline	1	0.933071264829574	0.997027610255795
4	105572808	105582312	2	neutral	AA	100	somatic	0	0.185625303889295	0.398872827650606
4	114584976	114592104	1	loss	A	-1	somatic	0	0.00566185840238151	0.012649618772243
4	120584376	120601008	2	neutral	AA	54.5766	somatic	0	0.558557048164785	0.928700884980151
4	124759008	124794648	2	neutral	AA	54.5678	somatic	0	0.510499810501896	0.816542323483732
4	125343504	125443296	2	neutral	AA	100	somatic	0	0.0457272110787659	0.00453882208189038
4	128064024	128223216	2	neutral	AA	100	somatic	0	0.00717210498296203	0.00344094030648157
4	128577240	128584368	2	neutral	AA	54.5678	somatic	0	0.458039250214183	0.420841581182439
4	137164104	137180736	1	loss	A	-1	germline	1	0.00508240730223886	0.0123360805267241
4	140404968	140431104	2	neutral	AA	54.5678	somatic	0	0.296891426815944	0.257356399182228
4	142096680	142253496	2	neutral	AA	69.8087	somatic	0	0.953577252358716	0.698383244316235
4	147416544	147449808	2	neutral	AA	21.8141	somatic	0	0.186883577229809	0.38686622044505
4	156321792	156333672	2	neutral	AA	100	somatic	0	0.048050326871512	0.0869416824192989
4	165079728	165084480	1	loss	A	-1	germline	1	0.0190543593445116	0.0512348615384597
4	168760152	171114768	2	neutral	AA	100	somatic	0	0.646704498129375	0.00728666916474296
4	171851328	171943992	2	neutral	AA	72.4649	somatic	0	0.839713563704513	0.994601505539864
4	172502352	172511856	1	loss	A	-1	germline	1	0.00150038501387645	0.00161010435117337
4	184130496	184147128	2	neutral	AA	54.5678	somatic	0	0.0747652634951465	0.0932967234362104
4	186171480	186178608	1	loss	A	-1	germline	1	0.0196965692888571	0.0532445445289867
4	189269784	189279288	1	loss	A	-1	germline	1	0.00144772590099686	0.00151811743236419
5	413424	415800	4	gain	-	-1	germline	1	0.0832807979922678	0.270065200173591
5	3956040	3972672	1	loss	A	-1	germline	1	1.98139920923667e-05	8.13684228617717e-06
5	12811392	12820896	1	loss	A	-1	germline	1	0.00122851755012723	0.00141923401310406
5	21448152	21452904	1	loss	A	-1	germline	1	0.0209438509607278	0.0571873003742764
5	23902560	23904936	0	loss	-	-1	germline	1	0.0832674236088048	0.270041972116642
5	26026704	26036208	1	loss	A	-1	germline	1	0.00127368759586417	0.00161063160450847
5	26796528	26803656	1	loss	A	-1	somatic	0	0.0049475071544351	0.0100063869166601
5	45372096	45376848	1	loss	A	-1	germline	1	0.0148369110730743	0.0382245796664359
5	46270224	46277352	1	loss	A	-1	germline	1	0.0207629462905976	0.0566249617927518
5	46405656	46410408	0	loss	-	-1	germline	1	0.0143084472037054	0.0366354734037992
5	60193584	60200712	1	loss	A	-1	germline	1	0.00590381713675538	0.00881492521919336
5	84652128	84659256	0	loss	-	-1	germline	1	0.0143062452964527	0.0366318815520877
5	86417496	86422248	1	loss	A	-1	somatic	0	0.0223764988554593	0.0604956088357005
5	91202760	91207512	1	loss	A	-1	germline	1	0.0184641975501323	0.0491855897215759
5	110139480	110153736	3	gain	-	-1	germline	1	2.22450737459289e-05	1.24259575766672e-05
5	118536264	118545768	1	loss	A	-1	germline	1	0.00596433352513248	0.0108607411060772
5	120042648	120049776	1	loss	A	-1	somatic	0	0.00607892410748699	0.00958970286701832
5	135776520	135786024	1	loss	A	-1	somatic	0	0.00171200984995267	0.00208658856509014
5	146064600	146176272	2	neutral	AA	74.4593	somatic	0	0.751006859766904	0.753749472091134
5	146190528	146228544	2	neutral	AA	100	somatic	0	0.77432780707227	0.498386775998243
5	146580192	146630088	2	neutral	AA	27.284	somatic	0	0.0472537867595548	0.0297107619449525
5	150823728	150845112	1	loss	A	-1	germline	1	1.375324279829e-06	2.59498685206694e-07
5	152289720	152296848	2	neutral	AA	100	somatic	0	0.322129978703018	0.18576305193411
5	159396336	159398712	2	neutral	AA	54.5678	somatic	0	0.204212083627692	0.440590610736452
5	163426032	163430784	2	neutral	AA	54.568	somatic	0	0.863529163617913	0.826271503456744
5	165761640	165771144	2	neutral	AA	28.2752	somatic	0	0.341589702109132	0.63584345307332
5	171497304	171506808	2	neutral	AA	54.5678	somatic	0	0.761660554502801	0.758113204010562
5	172317024	172331280	2	neutral	AA	36.1498	somatic	0	0.342347832905982	0.456432330399015
5	178150104	178304544	2	neutral	AA	15.7835	somatic	0	0.102205514176937	0.164800127538056
5	178430472	178473240	2	neutral	AA	100	germline	1	0.417915835528609	0.355157806674978
5	178584912	178587288	9	gain	AAAAAABBB	23.9472	germline	1	0.0832691679949272	0.270045001780499
5	178848648	178851024	2	neutral	AA	100	somatic	0	0.911680423141717	0.939736813028417
6	254232	256608	2	neutral	AA	100	somatic	0	0.162169493632186	0.387922510301348
6	256608	365904	3	gain	AAB	0.654797	germline	1	1.62673736497147e-30	0
6	365904	382536	3	gain	AAB	1.94738	germline	1	2.2184951984265e-05	1.23299211690631e-05
6	1235520	1245024	2	neutral	AA	40.3492	somatic	0	0.218044921997536	0.466450816681494
6	3965544	4051080	2	neutral	AA	54.5678	somatic	0	0.458292141178532	0.279141733496711
6	4526280	4547664	2	neutral	AA	27.1605	somatic	0	0.00646459599527136	0.0330924052030777
6	6821496	6852384	2	neutral	AA	21.2525	somatic	0	0.41406268631461	0.622921390401231
6	7185024	7211160	2	neutral	AA	36.3819	somatic	0	0.731217457061158	0.954207170892044
6	8544096	8560728	2	neutral	AA	54.5678	somatic	0	0.416599421004764	0.600160372539812
6	11480832	11497464	2	neutral	AA	100	somatic	0	0.211983324714726	0.532516780468256
6	11979792	12046320	2	neutral	AA	54.4952	somatic	0	0.0160535310151992	0.00106701133731169
6	13129776	13167792	2	neutral	AA	22.6116	somatic	0	0.196232453872887	0.601050627419614
6	18392616	18418752	2	neutral	AA	54.5873	somatic	0	0.198532008939636	0.238807533453223
6	20958696	20961072	5	gain	AAABB	70.6137	germline	1	0.0832749828291328	0.270055100839201
6	26209656	26219160	2	neutral	AA	54.5678	somatic	0	0.716804026562235	0.728602531644794
6	32487048	32529816	1	loss	A	-1	germline	1	5.61343781046594e-11	1.53321799700734e-13
6	35787312	35799192	3	gain	AAB	3.67285	germline	1	0.000108162731172091	9.13983950068253e-05
6	37113120	37158264	2	neutral	AA	21.4286	somatic	0	0.0215481810450058	0.0601111811316677
6	41499216	41534856	2	neutral	AA	46.2892	somatic	0	0.931444525212389	0.982835787191669
6	48962232	48971736	1	loss	A	-1	germline	1	0.00164640330109896	0.00160698995799868
6	50865408	50898672	2	neutral	AA	33.8164	somatic	0	0.627019845278802	0.564769462556098
6	54063504	54070632	0	loss	-	-1	germline	1	0.0143128519150888	0.0366481855073255
6	60231600	60238728	3	gain	-	-1	germline	1	0.00270410283509386	0.00496331237661773
6	60238728	60241104	6	gain	-	-1	germline	1	0.0832749828291328	0.270055100839201
6	64698480	64705608	2	neutral	AA	100	somatic	0	0.494438117339292	0.931833861600639
6	64945584	65023992	2	neutral	AA	100	somatic	0	0.0151755026627411	0.00682193070410808
6	67561560	67575816	2	neutral	AA	27.8222	somatic	0	0.0108686486382418	0.0314572126529555
6	68747184	69241392	2	neutral	AA	65.5782	somatic	0	0.00168336357763583	0.000758912723689109
6	73560960	73620360	2	neutral	AA	23.8851	somatic	0	0.0223699094602575	0.0912468254548662
6	75250296	75758760	2	neutral	AA	25.1414	somatic	0	0.135052355733878	0.0329544379178732
6	76326624	76367016	2	neutral	AA	27.2839	somatic	0	0.407697287445071	0.686801108474721
6	76730544	76742424	1	loss	A	-1	germline	1	0.000995349792245992	0.00132769553057144
6	77600160	77635800	2	neutral	AA	25.4205	somatic	0	0.0960522619308147	0.264636341146613
6	77887656	78410376	2	neutral	AA	10.6312	somatic	0	0.333918640693235	0.264342853249836
6	81092880	81097632	2	neutral	AA	100	somatic	0	0.854962359315431	0.818389149372289
6	82297512	82361664	2	neutral	AA	19.2982	somatic	0	0.49261972099781	0.41534908101187
6	82689552	82739448	2	neutral	AA	100	somatic	0	0.560209974165997	0.95221077666458
6	85191480	85281768	2	neutral	AA	100	somatic	0	0.191138092268508	0.340040727009952
6	87398784	87424920	2	neutral	AA	100	somatic	0	0.975814020152636	0.936065309683517
6	88465608	88491744	2	neutral	AA	100	somatic	0	0.946719114856782	0.980992212598608
6	90656280	90670536	2	neutral	AA	92.9547	somatic	0	0.888965512420493	0.98581760558778
6	92345616	92378880	2	neutral	AA	100	somatic	0	0.507766881617256	0.644494957495612
6	98611128	98701416	2	neutral	AA	100	somatic	0	0.0341513117114336	0.0267557348281804
6	101086920	101103552	2	neutral	AA	93.3639	somatic	0	0.329959202646742	0.338716894291136
6	103289472	103315608	1	loss	A	-1	germline	1	3.88197995183587e-08	5.79958137070236e-09
6	118645560	118647936	7	gain	AAAAAAA	8.89546	germline	1	0.0832726568559798	0.270051061182638
6	119130264	119154024	2	neutral	AA	54.5787	somatic	0	0.228725338064471	0.445312995262802
6	124414488	124452504	2	neutral	AA	100	somatic	0	0.634357088894491	0.756565880194265
6	129050064	129066696	2	neutral	AA	89.12	somatic	0	0.368907193198719	0.550191041377298
6	131029272	131086296	2	neutral	AA	54.5678	somatic	0	0.281486272383851	0.493007073062622
6	131535360	131609016	2	neutral	AA	27.5671	somatic	0	0.302388698093633	0.235863339420891
6	139074408	139098168	2	neutral	AA	21.8565	somatic	0	0.545159016236838	0.772661341818014
6	139316760	139359528	2	neutral	AA	36.3797	somatic	0	0.281095024688676	0.676650388029939
6	150714432	150731064	2	neutral	AA	54.5682	somatic	0	0.153725586278808	0.226219090991927
6	151184880	151194384	1	loss	A	-1	germline	1	0.00153785533790662	0.00164057857482147
6	153420696	153430200	3	gain	AAB	0.59958	germline	1	0.000548586565534304	0.000720928493366024
6	157312584	157314960	8	gain	AAAAABBB	2.76246	germline	1	0.0832697494635463	0.270046011673963
6	158840352	158845104	2	neutral	AA	100	germline	1	0.940065906571211	0.982414137961311
6	160788672	160857576	2	neutral	AA	2.50669	somatic	0	0.0883782137364913	0.294677081541744
6	162157248	162164376	2	neutral	AA	100	somatic	0	0.185496154625192	0.447987591419039
6	165310200	165319704	1	loss	A	-1	germline	1	0.00150926965385958	0.00155744860085227
6	167222880	167296536	2	neutral	AA	50.4929	germline	1	0.0925738585200494	0.222997436675814
6	169563240	169567992	2	neutral	AA	36.379	somatic	0	0.980450089495347	0.976554754874269
7	57487320	57496824	3	gain	-	-1	germline	1	0.000532685735556832	0.000671806297716016
7	61096464	61963704	2	neutral	AA	3.88007	somatic	0	0.900856056718856	0.526059047823967
7	62296344	62381880	3	gain	AAB	0.59356	germline	1	2.6937112045729e-09	2.47508494810589e-08
7	62400888	62405640	4	gain	-	-1	germline	1	0.0143101905922932	0.0366379602508776
7	62438904	62455536	3	gain	AAB	2.47312	germline	1	4.94879240637758e-06	2.24193557307739e-06
7	62517312	62619480	2	neutral	AA	2.16685	somatic	0	0.0119781226912756	0.0135049362418552
7	62942616	62947368	2	neutral	AA	54.5678	somatic	0	0.174030943238273	0.221519270253765
7	65796192	65822328	3	gain	AAB	0.144154	germline	1	9.41355307016973e-09	6.05115957341695e-10
7	66219120	66228624	2	neutral	AA	100	germline	1	0.965313620572747	0.945753791843141
7	67687488	67699368	2	neutral	AA	100	somatic	0	0.771261673818805	0.971569385780207
7	71389296	71486712	2	neutral	AA	27.2839	somatic	0	0.374644758712146	0.237005905846853
7	75725496	75742128	3	gain	AAB	3.25725	germline	1	4.62730561115434e-06	1.6763889393312e-06
7	99314424	99364320	2	neutral	AA	27.2839	somatic	0	0.0687493639660336	0.101579087347445
7	100949112	100956240	3	gain	AAB	0.825286	germline	1	0.00270350034244718	0.00496539021482845
7	100956240	100960992	10	gain	AAAAAABBBB	2.78653	germline	1	0.0143076214534545	0.0366349207911736
7	100960992	100970496	4	gain	AABB	0.290913	germline	1	0.000532608137920808	0.000671704973382981
7	105233040	105297192	2	neutral	AA	44.4193	somatic	0	0.784533355801519	0.820340394633698
7	109811592	109813968	0	loss	-	-1	germline	1	0.0832668421533424	0.270040962234205
7	123734952	123753960	2	neutral	AA	100	somatic	0	0.638405443383836	0.843907825520089
7	125588232	125616744	2	neutral	AA	100	somatic	0	0.33232124137217	0.354336548217895
7	126032544	126056304	2	neutral	AA	100	somatic	0	0.914671804420347	0.965140825906035
7	129812760	129850776	2	neutral	AA	36.3787	somatic	0	0.60252422629434	0.11764814351608
7	129974328	130007592	2	neutral	AA	27.3107	germline	1	0.00122709669802142	0.00348569499568452
7	133840080	133847208	3	gain	AAB	21.7277	germline	1	0.0027032995388247	0.00496466007272212
7	134638416	134674056	2	neutral	AA	18.1893	somatic	0	0.693756588337473	0.717472748675599
7	143847792	143850168	4	gain	AAAA	100	germline	1	0.0832778903695833	0.270060150471935
7	152358624	152401392	2	neutral	AA	63.3964	somatic	0	0.732806429628202	0.765954346453301
7	152401392	152408520	10	gain	AAAAAAAABB	2.36084	germline	1	0.0027001553941579	0.00495803712849119
7	152413272	152418024	2	neutral	AA	5.50115	somatic	0	0.115596281007385	0.191768360791182
7	153140328	153152208	2	neutral	AA	36.38	somatic	0	0.540112737523979	0.755342992755982
7	154599192	154608696	1	loss	A	-1	germline	1	0.00136406819895529	0.00155753749387266
7	154948464	155053008	2	neutral	AA	93.3806	somatic	0	0.641688028920636	0.747174667851001
7	157552560	157621464	2	neutral	AA	8.80287	somatic	0	0.0209485327877871	0.14670142375093
7	158593248	158595624	7	gain	AAAABBB	74.4216	germline	1	0.0832738198359777	0.270053081005406
8	643896	651024	1	loss	A	-1	germline	1	0.0209407755448064	0.0571860806687737
8	6111072	6115824	1	loss	A	-1	germline	1	0.0144298285430601	0.0368609931729578
8	15543792	15555672	1	loss	A	-1	germline	1	0.000231719511365386	0.000236770183121959
8	25114320	25133328	1	loss	A	-1	germline	1	2.82256814997354e-06	1.20021552596494e-06
8	39375072	39529512	1	loss	A	-1	germline	1	4.54102858988863e-37	0
8	43236072	43238448	4	gain	-	-1	germline	1	0.0832790534087889	0.270062170344327
8	43238448	43240824	6	gain	-	-1	germline	1	0.0832738198359777	0.270053081005406
8	43240824	43243200	3	gain	-	-1	germline	1	0.0832976638255689	0.270094489802356
8	45973224	45996984	2	neutral	AA	3.41339	germline	1	0.23875377013217	0.449844593378053
8	46493568	46495944	0	loss	-	-1	germline	1	0.083286031920334	0.270074289810253
8	62122896	62127648	1	loss	A	-1	somatic	0	0.0169609718245593	0.0427781813249035
8	63745704	63786096	2	neutral	AA	54.5678	somatic	0	0.472500987027459	0.817696916071314
8	66497112	66563640	2	neutral	AA	45.9819	somatic	0	0.151965975886632	0.282145984992549
8	71301384	71306136	1	loss	A	-1	germline	1	0.0143538362485963	0.0367616596364371
8	71883504	71988048	2	neutral	AA	100	germline	1	0.00470411078734814	0.0152582404791569
8	76086648	76165056	2	neutral	AA	100	somatic	0	0.0383114083212162	0.0339094419562341
8	84226824	84243456	2	neutral	AA	100	somatic	0	0.674731713220788	0.793432066942507
8	96361056	96368184	2	neutral	AA	100	somatic	0	0.942913199380293	0.967749930884826
8	124138872	124162632	2	neutral	AA	100	somatic	0	0.118930526176733	0.201075688032129
8	128993040	129021552	2	neutral	AA	100	somatic	0	0.406625570639741	0.889588226147407
8	144104400	144123408	2	neutral	AA	100	somatic	0	0.459856265004655	0.454941581457487
8	144123408	144128160	4	gain	AAAB	34.1187	germline	1	0.0143112917763652	0.0366409999312142
8	144128160	144282600	2	neutral	AA	6.18352	somatic	0	0.893953829929408	0.96189407682648
8	144510696	145069056	2	neutral	AA	100	somatic	0	5.77596467565285e-18	5.7065463465733e-14
9	27875232	27879984	2	neutral	AA	54.5678	somatic	0	0.199976246744895	0.366584845649715
9	28188864	28191240	3	gain	AAA	7.79382	germline	1	0.0833127872696756	0.27012075144074
9	34791768	34827408	2	neutral	AA	100	somatic	0	0.27151607813574	0.493633595237897
9	38733552	38773944	2	neutral	AA	35.3521	germline	1	0.727150638803585	0.965615387619201
9	40907592	40924224	5	gain	AAABB	1.88398	somatic	0	0.000532242923911391	0.00067111757472027
9	40924224	40926600	7	gain	AAAAABB	7.06198	germline	1	0.0832726568559798	0.270051061182638
9	40926600	40928976	6	gain	AAAABB	3.31319	germline	1	0.0832744013309107	0.270054090920925
9	69122592	69129720	1	loss	A	-1	germline	1	0.0199932409400191	0.054187610845279
9	70840440	70849944	2	neutral	AA	100	somatic	0	0.34236157614516	0.515334528214093
9	85288896	85324536	2	neutral	AA	10.9136	germline	1	0.0503916860195945	0.0679718664670612
9	86538672	86541048	1	loss	A	-1	germline	1	0.0833989169367118	0.270270276266711
9	87976152	87985656	2	neutral	AA	22.2653	somatic	0	0.49637247797749	0.580182229543436
9	89758152	89765280	2	neutral	AA	100	somatic	0	0.844216193576112	0.985809630925511
9	93101184	93103560	2	neutral	AA	100	somatic	0	0.121818000833008	0.331669443468084
9	101951784	101961288	1	loss	A	-1	germline	1	0.00131229748389687	0.00160036767034355
9	103013856	103016232	0	loss	-	-1	germline	1	0.083286031920334	0.270074289810253
9	103593600	103622112	2	neutral	AA	36.384	somatic	0	0.561485582448942	0.856721529299279
9	103805064	103807440	1	loss	A	-1	germline	1	0.0833145324255723	0.270123781749708
9	105905448	105929208	2	neutral	AA	100	somatic	0	0.301650784328097	0.413078524751623
9	115820496	115827624	3	gain	AAB	13.2371	germline	1	0.00270427021593443	0.0049647162340053
9	119524680	119543688	2	neutral	AA	100	germline	1	0.376878155634293	0.672715037189107
9	128572488	128591496	2	neutral	AA	93.3662	somatic	0	0.0812001067598193	0.145339202375948
9	128648520	128653272	1	loss	A	-1	somatic	0	0.0209181065039876	0.0559324173559141
9	128812464	128826720	2	neutral	AA	54.571	somatic	0	0.312080907044041	0.266179439342452
9	129425472	129439728	3	gain	AAB	0.283669	germline	1	2.21891706305601e-05	1.23463897415688e-05
9	129922056	129941064	2	neutral	AA	100	somatic	0	0.124248444499902	0.21503513543138
9	136161432	136168560	1	loss	A	-1	germline	1	0.0205087977830296	0.0551032715392548
9	137715336	137717712	4	gain	AAAA	10.914	germline	1	0.0832778903695833	0.270060150471935
9	137717712	137800872	2	neutral	AA	9.27488	germline	1	0.220024343284539	0.497830621324616
10	11742192	11754072	2	neutral	AA	29.9905	somatic	0	0.121636876841296	0.266926199094749
10	15301440	15444000	2	neutral	AA	12.791	somatic	0	0.37283979329084	0.683095670928008
10	18532800	18570816	2	neutral	AA	5.56865	somatic	0	0.164350939662429	0.236697272694525
10	20858904	20896920	2	neutral	AA	70.3243	somatic	0	0.724614770602608	0.544732413332317
10	26568432	26594568	2	neutral	AA	0.382063	germline	1	0.562994219932461	0.786199698004777
10	26623080	26658720	2	neutral	AA	0.348199	germline	1	0.144110539397507	0.294659076807751
10	26927208	26934336	2	neutral	AA	68.9525	germline	1	0.825241611936557	0.71791280647659
10	26936712	26941464	3	gain	AAA	2.81094	somatic	0	0.0143190939703735	0.0366523315928062
10	38484072	38486448	2	neutral	AA	9.09735	somatic	0	0.0888458327213747	0.279600952128603
10	38486448	38491200	4	gain	AAAB	9.438	germline	1	0.0143157890538071	0.0366548194410752
10	38491200	38526840	3	gain	AAA	0.676163	germline	1	4.05719465925522e-11	1.50538470577999e-11
10	38526840	38529216	19	gain	AAAAAAAAAAAAAAAAABB	4.91436	germline	1	0.0832668421533424	0.270040962234211
10	38574360	38576736	3	gain	AAB	50.4103	germline	1	0.0833733032893537	0.270225816631785
10	38576736	38581488	4	gain	AAAA	1.55058	germline	1	0.0143100988303277	0.0366376839272423
10	38581488	38835720	3	gain	AAA	100	germline	1	1.81414582368034e-17	0
10	39558024	39562776	1	loss	A	-1	germline	1	0.019506430071645	0.0526581742025465
10	39562776	41843736	2	neutral	AA	2.72589	germline	1	0.0791543324202027	0.0745389586489057
10	41857992	41915016	32	gain	AAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	5.99614	germline	1	4.59376937728846e-06	1.66338673168731e-06
10	42299928	42321312	3	gain	AAA	2.54675	germline	1	2.07241385411204e-07	3.15211764467804e-08
10	46291608	46298736	2	neutral	AA	9.96415	somatic	0	0.242253908307332	0.428005025441572
10	46514952	46560096	5	gain	AAABB	0.652284	germline	1	9.25626094531011e-13	3.44169137633799e-15
10	55645920	55691064	2	neutral	AA	36.3945	germline	1	0.255438009254984	0.516888835955284
10	76495320	76502448	1	loss	A	-1	germline	1	0.0168967151963576	0.0445290238755016
10	87612624	87731424	2	neutral	AA	100	somatic	0	0.119508037197276	0.0891276442152253
10	88612920	88655688	2	neutral	AA	36.3839	somatic	0	0.0695310517405359	0.112838221575831
10	95268096	95275224	2	neutral	AA	100	somatic	0	0.887337986770876	0.933619989219756
10	96810120	96921792	2	neutral	AA	60.9341	somatic	0	0.771548915062773	0.583037820224098
10	101543112	102206016	2	neutral	AA	6.46294	germline	1	0.876591256165152	0.338675028120793
10	103249080	103251456	4	gain	AAAA	17.8672	germline	1	0.0832807979922678	0.270065200173591
10	106694280	106741800	2	neutral	AA	71.7692	germline	1	0.000681147253656292	0.00305190503334019
10	111346488	111351240	2	neutral	AA	100	somatic	0	0.150335807558359	0.323459006189679
10	126122832	126127584	2	neutral	AA	100	somatic	0	0.592581668714742	0.933176142533259
10	128463192	128465568	20	gain	AAAAAAAAAAABBBBBBBBB	66.0737	germline	1	0.0832668421533424	0.270040962234211
10	132250536	132281424	2	neutral	AA	90.1733	somatic	0	0.000514951290351408	0.00178053586535365
10	132673464	132678216	2	neutral	AA	100	germline	1	0.286650254089728	0.617482289452483
11	4946832	4953960	1	loss	A	-1	germline	1	0.00607977949951625	0.00917591652374783
11	5761800	5787936	1	loss	A	-1	germline	1	4.50561728970789e-08	6.60816001918363e-09
11	21403008	21483792	1	loss	A	-1	germline	1	4.94752674157429e-20	0
11	28984824	28991952	0	loss	-	-1	germline	1	0.0143108329405848	0.0366426580316677
11	36307656	36310032	4	gain	-	-1	germline	1	0.0832895213537398	0.270080349692096
11	42946200	42948576	5	gain	-	-1	germline	1	0.0832749828291328	0.270055100839201
11	47035296	47042424	0	loss	-	-1	germline	1	0.0143098235475458	0.0366418289732343
11	50378328	50394960	3	gain	-	-1	germline	1	2.21601828501127e-05	1.23243433812759e-05
11	54930744	54937872	3	gain	AAB	6.76973	germline	1	0.0027093631141234	0.00497939425610538
11	55182600	55215864	1	loss	A	-1	germline	1	1.9482585870753e-08	1.03110764371195e-09
11	57986280	58152600	2	neutral	AA	100	somatic	0	0.254030141697238	0.0365371550455519
11	62505432	62562456	2	neutral	AA	27.2871	somatic	0	0.577998470709763	0.439191113420193
11	64220904	64382472	2	neutral	AA	12.7419	somatic	0	0.0619213370550551	0.0852275736565326
11	64608192	64636704	2	neutral	AA	36.3818	somatic	0	0.00219779242047692	0.0161981592067091
11	66941424	66943800	2	neutral	AA	100	somatic	0	0.216124329232003	0.454655631549395
11	66943800	66946176	0	loss	-	-1	germline	1	0.0832714938891387	0.270049041370892
11	71403552	71534232	2	neutral	AA	12.4632	somatic	0	0.000458723989641887	0.00474528049937473
11	74948544	74988936	2	neutral	AA	100	germline	1	0.305277850772339	0.447036778564385
11	76573728	76587984	2	neutral	AA	100	somatic	0	0.825481603998538	0.879373249689871
11	77177232	77203368	2	neutral	AA	26.7987	somatic	0	0.0269748962439829	0.132306356266668
11	85552632	85564512	1	loss	A	-1	germline	1	0.000334803040233946	0.000260131894781357
11	86773896	86783400	2	neutral	AA	54.5678	somatic	0	0.744539940159799	0.694531061251219
11	90867744	90872496	2	neutral	AA	100	somatic	0	0.309813632674374	0.330030947781359
11	97563312	97625088	2	neutral	AA	54.5678	somatic	0	0.943420890159787	0.979406626373175
11	114045624	114050376	2	neutral	AA	100	somatic	0	0.598940543125734	0.531043702745933
11	117459936	117486072	2	neutral	AA	100	somatic	0	0.0915123073241262	0.0629346392130776
11	118671696	118707336	2	neutral	AA	10.6565	somatic	0	0.32411021304681	0.463226598481548
11	119351232	119384496	2	neutral	AA	13.8731	somatic	0	0.64010461882228	0.695095186004569
11	120945528	121368456	2	neutral	AA	23.9915	somatic	0	3.26320398059443e-15	2.86829449080983e-11
11	121715352	121781880	2	neutral	AA	67.8963	somatic	0	0.00445871632154923	0.0226352025130971
11	122492304	122497056	2	neutral	AA	100	somatic	0	0.703764860659687	0.57617166024907
11	128437056	128453688	2	neutral	AA	54.5765	somatic	0	0.0259086261866924	0.121640086246372
11	131264496	131266872	1	loss	A	-1	germline	1	0.0833145324255723	0.270123781749708
12	2608848	2658744	2	neutral	AA	36.3786	somatic	0	8.38018803855817e-07	2.27801640195757e-05
12	7921584	7935840	2	neutral	AA	27.2844	somatic	0	0.388080256121523	0.4855368887
12	10155024	10261944	2	neutral	AA	36.6438	somatic	0	0.0793154124785109	0.0124487721719025
12	16204320	16216200	2	neutral	AA	36.3791	somatic	0	0.37158600618317	0.480649616162651
12	23788512	23795640	2	neutral	AA	100	somatic	0	0.200747842438995	0.293923797702839
12	33955416	34097976	2	neutral	AA	100	somatic	0	0.146936660521597	0.177289604129347
12	39755232	39807504	2	neutral	AA	100	somatic	0	0.405994938669582	0.646359845855949
12	56463264	56534544	2	neutral	AA	100	somatic	0	0.0187729500523316	0.0796041579599901
12	63417816	63524736	2	neutral	AA	41.2212	somatic	0	0.000346432182200102	0.000473458256682546
12	74566008	74625408	2	neutral	AA	36.9279	somatic	0	0.151431529314239	0.255383156986649
12	79762320	79769448	3	gain	AAA	27.8649	germline	1	0.00270733495762618	0.00497095375756906
12	86032584	86039712	1	loss	A	-1	germline	1	0.00572681468210013	0.00953141971583271
12	93291264	93616776	2	neutral	AA	24.4089	somatic	0	0.0156155542042821	0.0547928615650884
12	95826456	95850216	2	neutral	AA	100	somatic	0	0.879598148422822	0.984822946250412
12	99399960	99409464	1	loss	A	-1	germline	1	0.00134009555416241	0.00160410956399282
12	101467080	101483712	2	neutral	AA	46.3729	somatic	0	0.108287672900296	0.188708775122996
12	105511032	105644088	2	neutral	AA	52.9447	somatic	0	0.0648248526022348	0.29499458630603
12	108849312	108851688	1	loss	A	-1	somatic	0	0.0922184450150828	0.285255234697871
12	120926520	120928896	0	loss	-	-1	germline	1	0.0832726568559798	0.270051061182632
12	122394888	122406768	2	neutral	AA	36.3786	somatic	0	0.907892454337802	0.696820826947444
12	124438248	124440624	4	gain	AAAA	8.23506	germline	1	0.08328428724804	0.270071259906557
12	124540416	124542792	1	loss	A	-1	somatic	0	0.0891587691888038	0.280127451927575
12	131197968	131205096	2	neutral	AA	36.3809	germline	1	0.186346378623695	0.603959719954995
12	131649408	131651784	1	loss	A	-1	somatic	0	0.0957357366431516	0.291063542163049
12	132782760	132875424	2	neutral	AA	15.2017	somatic	0	0.0279083171833585	0.0267649099443464
13	21376872	21379248	3	gain	AAB	13.5256	somatic	0	0.0833087153544028	0.270113680816298
13	22020768	22023144	0	loss	-	-1	germline	1	0.0832680050675565	0.270042982001836
13	22880880	22909392	2	neutral	AA	54.5678	somatic	0	0.0291101259966369	0.0409801167205945
13	23059080	23063832	1	loss	A	-1	germline	1	0.0205768424543103	0.0559866892560372
13	26948592	26969976	2	neutral	AA	21.8499	somatic	0	0.365267709731854	0.459620630564606
13	27271728	27352512	2	neutral	AA	18.2349	somatic	0	0.538823814799062	0.805700840281275
13	36217368	36222120	3	gain	AAB	100	somatic	0	0.0143336068421485	0.0366785996655257
13	37417248	37433880	2	neutral	AA	100	germline	1	0.318516018718324	0.131880668712447
13	38481696	38486448	1	loss	A	-1	germline	1	0.0263885756156928	0.0558873582117324
13	41202216	41240232	2	neutral	AA	100	somatic	0	0.205560158038647	0.192644436601644
13	44545248	44571384	2	neutral	AA	23.1996	somatic	0	0.239993660277652	0.141593059778112
13	45417240	45436248	2	neutral	AA	60.6421	somatic	0	5.67975919487953e-05	0.000121128785495972
13	46728792	46735920	2	neutral	AA	70.2665	somatic	0	0.940210154817364	0.998196298752563
13	49560984	49575240	2	neutral	AA	100	somatic	0	0.19680857725689	0.48627390686098
13	50494752	50501880	1	loss	A	-1	germline	1	0.0148268723005332	0.038201645018109
13	52312392	52319520	3	gain	AAB	10.7219	germline	1	0.0143431207236993	0.0367057145140588
13	55961928	55985688	2	neutral	AA	54.5678	somatic	0	0.552935376064635	0.481326722893393
13	57912624	57981528	2	neutral	AA	100	somatic	0	0.306510067908721	0.211630295669693
13	58014792	58024296	1	loss	A	-1	germline	1	0.00110125027331361	0.0014951483588741
13	59582952	59592456	2	neutral	AA	100	somatic	0	0.821872323497401	0.994041910487117
13	62270208	62279712	2	neutral	AA	100	germline	1	0.983549241714987	0.896428136070245
13	63028152	63030528	3	gain	AAB	2.95553	germline	1	0.0833302401611883	0.270151055647054
13	63059040	63068544	4	gain	AABB	1.48626	germline	1	0.00053286360320777	0.000672739154129798
13	67525920	67528296	4	gain	AAAA	73.8955	germline	1	0.0832790534087889	0.270062170344327
13	70738272	70797672	2	neutral	AA	15.7986	somatic	0	0.143821539459027	0.107931526006757
13	71902512	71907264	1	loss	A	-1	germline	1	0.014371051039637	0.0368248952191739
13	72270792	72273168	0	loss	-	-1	germline	1	0.083270912410652	0.270048031469157
13	72320688	72327816	2	neutral	AA	100	somatic	0	0.0389948788487398	0.0580643823386277
13	82592136	82599264	1	loss	A	-1	germline	1	0.00560478277512925	0.00889767782981776
13	90209592	90214344	1	loss	A	-1	somatic	0	0.0211398184731379	0.0568236027005381
13	98601624	98604000	0	loss	-	-1	germline	1	0.0832668421533424	0.270040962234205
13	106356888	106366392	2	neutral	AA	100	somatic	0	0.0215280746973652	0.0135717152142906
13	107908416	107948808	2	neutral	AA	100	somatic	0	0.512508382953338	0.622445034619461
13	108293328	108300456	1	loss	A	-1	somatic	0	0.0069709634075032	0.00962527948364755
13	113176008	113195016	2	neutral	AA	27.3385	somatic	0	0.267199114451155	0.305161822678197
14	16092648	16095024	7	gain	-	-1	germline	1	0.0832732383443341	0.270052071092643
14	18658728	18661104	4	gain	AAAB	28.1956	somatic	0	0.0832790534087889	0.270062170344327
14	18684864	18691992	3	gain	AAB	95.7233	somatic	0	0.0146328705122381	0.0375875023706077
14	18691992	18694368	3	gain	AAB	37.9356	somatic	0	0.0833476960141253	0.270181362334699
14	25423200	25451712	2	neutral	AA	100	somatic	0	0.399647333814079	0.606732917289502
14	27088776	27122040	2	neutral	AA	100	somatic	0	0.116504631740671	0.0989263896399465
14	29633472	29754648	2	neutral	AA	45.3063	somatic	0	0.0572491883933699	0.161714133954605
14	32843448	32848200	2	neutral	AA	100	somatic	0	0.332571182105503	0.603006616380769
14	34347456	34352208	1	loss	A	-1	somatic	0	0.0209337292009834	0.0566277837937105
14	37809288	37821168	2	neutral	AA	29.6747	somatic	0	0.481700103011437	0.565096089228544
14	41140440	41199840	1	loss	A	-1	germline	1	1.93076061904369e-14	0
14	44264880	44286264	2	neutral	AA	54.5788	somatic	0	0.903671103197354	0.894667706028581
14	45852048	45920952	2	neutral	AA	100	somatic	0	0.484108191909577	0.898851335157483
14	50530392	50539896	2	neutral	AA	100	somatic	0	0.751233812855916	0.859579560481884
14	52528608	52530984	1	loss	A	-1	germline	1	0.0834676395491388	0.270389535277908
14	55833624	55838376	2	neutral	AA	100	somatic	0	0.0505607120569574	0.111597225821284
14	60454944	60478704	2	neutral	AA	100	somatic	0	0.382311597398644	0.319361484699039
14	60621264	60652152	2	neutral	AA	100	germline	1	0.678890619527898	0.56319348605842
14	65109528	65154672	2	neutral	AA	36.3795	somatic	0	0.418993250063059	0.253885772749426
14	69730848	69754608	2	neutral	AA	36.3786	somatic	0	0.402429069298739	0.350643335333751
14	70077744	70089624	2	neutral	AA	100	germline	1	0.103729055839417	0.217940909655099
14	72798264	72881424	2	neutral	AA	21.4538	somatic	0	0.0653337241246979	0.0883843710177142
14	74520864	74573136	2	neutral	AA	100	somatic	0	0.0638225232649502	0.0331936852246079
14	75803904	75851424	2	neutral	AA	16.561	somatic	0	0.0500364490084584	0.310881791545453
14	78797664	78838056	2	neutral	AA	100	germline	1	0.81689687646575	0.539367036167459
14	79208712	79230096	2	neutral	AA	100	somatic	0	0.75523653578974	0.967390423216531
14	79641144	79648272	1	loss	A	-1	germline	1	0.00455228488510012	0.00814140413553233
14	82732320	82758456	2	neutral	AA	93.3662	somatic	0	0.96983293958958	0.843495439536014
14	90444816	90539856	2	neutral	AA	10.0871	germline	1	0.0194180847552083	0.096485986861234
14	95481936	95496192	2	neutral	AA	100	somatic	0	0.890452206666143	0.881378937457343
14	99927432	99929808	7	gain	AAAABBB	6.80039	germline	1	0.0832732383443341	0.270052071092643
14	104296896	104327784	2	neutral	AA	11.8137	somatic	0	0.229722451041319	0.366354253299658
14	104812488	105216408	2	neutral	AA	22.5741	somatic	0	0.486134157720509	0.290947893407996
15	0	17081064	7	gain	-	-1	somatic	0	NA	NA
15	17081064	17083440	16	gain	-	-1	germline	1	0.0832674236088048	0.270041972116647
15	17083440	20340936	7	gain	-	-1	somatic	0	0.792309909469361	0.825308625980637
15	20340936	20343312	16	gain	-	-1	germline	1	0.0832674236088048	0.270041972116647
15	20343312	20378952	7	gain	-	-1	somatic	0	4.59599424473237e-06	1.6638698094873e-06
15	20378952	20381328	3	gain	-	-1	germline	1	0.083421625270288	0.270309688132962
15	20381328	20671200	7	gain	-	-1	germline	1	1.97347155686181e-11	1.87405646556726e-13
15	22225104	22251240	4	gain	AAAB	1.6124	germline	1	4.59835590338281e-06	1.6648363709848e-06
15	22270248	22272624	3	gain	AAA	100	germline	1	0.0832976638255689	0.270094489802356
15	23650704	23657832	2	neutral	AA	54.5678	somatic	0	0.226667521407538	0.550213000661398
15	25095312	25109568	2	neutral	AA	100	somatic	0	0.228207327025924	0.266888177056477
15	25527744	25530120	4	gain	AAAB	79.5084	germline	1	0.0832819610643673	0.270067220073552
15	26444880	26485272	2	neutral	AA	54.5678	somatic	0	0.939799188021773	0.274735819015924
15	26891568	26898696	2	neutral	AA	54.5679	somatic	0	0.370591425567094	0.200603416904502
15	27307368	27309744	1	loss	A	-1	germline	1	0.0834321077285972	0.27032787963955
15	34437744	34520904	1	loss	A	-1	germline	1	2.98173457697855e-20	0
15	35022240	35038872	2	neutral	AA	86.5595	somatic	0	0.962352470777115	0.815462213428635
15	38610000	38612376	2	neutral	AA	100	somatic	0	0.124309406875488	0.335335241515511
15	50806008	50953320	2	neutral	AA	11.94	somatic	0	0.8605182391859	0.803768339738115
15	51946488	51967872	2	neutral	AA	100	somatic	0	0.357160661408495	0.741967208605204
15	52205472	52233984	2	neutral	AA	90.1628	somatic	0	0.0451371847105682	0.0426154278912181
15	52661664	52675920	2	neutral	AA	54.5679	somatic	0	0.271557766772056	0.514504590349525
15	53103600	53105976	2	neutral	AA	100	somatic	0	0.890534438365302	0.932788349043979
15	55401192	55405944	3	gain	AAB	25.7452	germline	1	0.0143243281313628	0.0366600720503931
15	56850552	56886192	2	neutral	AA	54.5678	somatic	0	0.683429262501076	0.677437832332945
15	57392280	57394656	2	neutral	AA	100	somatic	0	0.129937418185082	0.34353151630351
15	58720464	58729968	2	neutral	AA	100	somatic	0	0.398874069458845	0.475290318417196
15	59141016	59150520	2	neutral	AA	36.3814	somatic	0	0.680273045512032	0.624270009200591
15	59991624	59994000	2	neutral	AA	100	somatic	0	0.419635307093755	0.655911994919583
15	60302880	60314760	2	neutral	AA	23.8919	somatic	0	0.197917255669608	0.238797560048889
15	64363464	64710360	2	neutral	AA	13.3136	germline	1	1.32450045424088e-07	1.72140918830443e-06
15	71805096	71826480	2	neutral	AA	100	somatic	0	0.599682119510451	0.783719252574512
15	72092592	72097344	1	loss	A	-1	germline	1	0.020873215893155	0.0565935248159034
15	72323064	72380088	2	neutral	AA	18.5492	germline	1	0.487423369061423	0.106556206152693
15	72905184	72974088	2	neutral	AA	100	somatic	0	0.307103700288802	0.366541713861326
15	73634616	73658376	2	neutral	AA	21.8359	somatic	0	0.886835935682016	0.995182117687844
15	74480472	74492352	2	neutral	AA	100	somatic	0	0.205129604796126	0.204753136029175
15	76452552	76516704	2	neutral	AA	27.2839	somatic	0	0.0323710805454798	0.19829801701267
15	78503040	78505416	2	neutral	AA	100	somatic	0	0.53854110858631	0.748236934563542
15	79013880	79016256	2	neutral	AA	100	somatic	0	0.880105552532959	0.92916126253574
15	80104464	80118720	2	neutral	AA	54.5679	somatic	0	0.199980389503581	0.389566717752101
15	83378592	83383344	2	neutral	AA	54.5732	somatic	0	0.416282819807592	0.869562290711984
15	85284144	85381560	2	neutral	AA	19.0101	somatic	0	0.0119934191462136	0.0335683999713169
15	88605792	88610544	2	neutral	AA	54.5678	somatic	0	0.16034796682524	0.172668239625052
15	91592424	91594800	2	neutral	AA	100	somatic	0	0.946798340304987	0.950277184972715
15	94039704	94053960	2	neutral	AA	3.61862	somatic	0	0.264195078558208	0.266201490064016
15	94165632	94175136	2	neutral	AA	57.1973	somatic	0	0.491522620634732	0.555211814777961
15	96168600	96289776	2	neutral	AA	100	somatic	0	0.926185891056519	0.879035335706485
15	100709136	100711512	3	gain	AAB	93.6869	germline	1	0.0833011536537374	0.270100550015027
15	101578752	101588256	2	neutral	AA	27.2839	somatic	0	0.235927429970505	0.537758229788643
16	845856	848232	4	gain	AAAB	20.7922	germline	1	0.0832807979922678	0.270065200173591
16	1024056	1026432	7	gain	AAAAABB	21.2131	germline	1	0.0832732383443341	0.270052071092643
16	1506384	1518264	2	neutral	AA	21.8271	somatic	0	0.990454155016956	0.998109759444434
16	9967320	10181160	2	neutral	AA	26.3755	somatic	0	0.587964955136795	0.643089287063069
16	11644776	11649528	2	neutral	AA	100	somatic	0	0.660087449074834	0.742673869955595
16	14351040	14355792	1	loss	A	-1	somatic	0	0.0212823494463793	0.0576556846478928
16	17043048	17045424	1	loss	A	-1	somatic	0	0.0849149403549123	0.272891653260601
16	19005624	19038888	2	neutral	AA	100	somatic	0	0.00132428906461786	0.0149636616735416
16	19934640	19953648	1	loss	A	-1	germline	1	2.07191498014806e-06	5.12023055287969e-07
16	21557448	21583584	3	gain	AAB	2.43864	germline	1	9.34810791983009e-09	5.8449567408303e-10
16	22614768	22697928	3	gain	AAB	1.4037	germline	1	2.91661369689038e-23	0
16	29761776	29790288	2	neutral	AA	100	germline	1	0.345248050239959	0.151373077737886
16	34062336	34064712	33	gain	AAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	100	germline	1	0.0832668421533424	0.270040962234211
16	34069464	34071840	3	gain	AAA	5.60887	germline	1	0.0832965005758311	0.270092469753522
16	34083720	34086096	19	gain	AAAAAAAAAAAABBBBBBB	100	germline	1	0.0832668421533424	0.270040962234211
16	34095600	34100352	9	gain	AAAAAABBB	1.16317	germline	1	0.0143077132014064	0.0366351970965755
16	34100352	34159752	2	neutral	AA	1.91217	germline	1	0.652550077821015	0.856628563572135
16	34162128	34164504	3	gain	AAB	1.1691	germline	1	0.0833046436003406	0.270106610326948
16	34174008	34176384	5	gain	AAABB	1.02695	germline	1	0.0832749828291328	0.270055100839201
16	34193016	34204896	2	neutral	AA	5.35748	germline	1	0.659792188287616	0.978953099942165
16	34204896	34207272	3	gain	AAB	5.3546	somatic	0	0.0832959189558967	0.27009145973324
16	34212024	34214400	3	gain	AAB	3.15474	somatic	0	0.0832959189558967	0.27009145973324
16	34898688	34958088	2	neutral	AA	0.902739	germline	1	3.72799090785884e-08	1.3195247672293e-08
16	35960760	36089064	2	neutral	AA	1.50369	somatic	0	0.454002556981026	0.185372953119287
16	36122328	36127080	4	gain	-	-1	germline	1	0.014311658854333	0.0366407235875208
16	55527120	55550880	2	neutral	AA	54.5678	somatic	0	0.850707083172717	0.885541214003379
16	57691656	57694032	1	loss	A	-1	somatic	0	0.0880962654722709	0.278330152023321
16	58763232	58798872	2	neutral	AA	54.5678	somatic	0	0.75003794434068	0.696770713538463
16	65320992	65325744	1	loss	A	-1	somatic	0	0.0219282757898434	0.0590167140250809
16	67233672	68568984	2	neutral	AA	10.5562	somatic	0	0.952793752932833	0.047268167144786
16	70151400	70163280	3	gain	AAB	2.28492	germline	1	0.000107898558543074	9.11059597690222e-05
16	74109816	74112192	1	loss	A	-1	somatic	0	0.0837096978601428	0.270809268135546
16	76504824	76509576	1	loss	A	-1	somatic	0	0.0210413142576	0.0518938650035963
16	78336720	78350976	1	loss	A	-1	germline	1	4.72573705375904e-05	4.38858120660468e-05
16	87220584	87222960	3	gain	AAB	7.89574	somatic	0	0.0833040619343487	0.270105600268069
17	807840	831600	2	neutral	AA	13.9006	somatic	0	0.285109966489317	0.145173931430266
17	4153248	4469256	2	neutral	AA	100	somatic	0	0.392143443045951	0.776695364303204
17	16817328	16819704	4	gain	AABB	19.5538	germline	1	0.0832813795266728	0.270066210122193
17	19813464	19834848	2	neutral	AA	22.0624	somatic	0	0.80773878396038	0.931516864228479
17	21291336	21303216	4	gain	AABB	0.294456	germline	1	0.000107617574498669	9.0898356409963e-05
17	21852072	21859200	5	gain	-	-1	germline	1	0.00270079064318272	0.00495882247787716
17	21859200	21885336	3	gain	-	-1	germline	1	9.29164221562945e-09	5.63510127449263e-10
17	21885336	21968496	0	loss	-	-1	germline	1	4.86763526156621e-24	0
17	21975624	21978000	29	gain	-	-1	germline	1	0.0832668421533424	0.270040962234211
17	21978000	21992256	8	gain	-	-1	germline	1	0.000107547920006318	9.08332514453214e-05
17	22122936	22158576	5	gain	AAABB	0.218424	germline	1	9.14335582767631e-11	1.38500322321988e-12
17	22709808	22726440	2	neutral	AA	2.86954	germline	1	0.270915705731564	0.261892836606636
17	26782272	26806032	3	gain	-	-1	somatic	0	5.39326430873757e-08	1.57996624672307e-08
17	26808408	26827416	4	gain	-	-1	germline	1	4.66392409010632e-06	1.77270722667711e-06
17	26827416	26841672	3	gain	-	-1	germline	1	2.22255881611295e-05	1.2371551901813e-05
17	26846424	26865432	3	gain	-	-1	germline	1	6.95633618152419e-06	6.18471756774763e-06
17	26865432	26867808	9	gain	-	-1	germline	1	0.0832697494635463	0.270046011673963
17	26867808	26877312	3	gain	-	-1	germline	1	0.000546763246904274	0.000714234835047844
17	34530408	34542288	2	neutral	AA	54.5678	somatic	0	0.358341274360654	0.542680081073649
17	53776008	53780760	1	loss	A	-1	germline	1	0.0184607539615566	0.0461684401835217
17	55161216	55184976	2	neutral	AA	54.5678	somatic	0	0.510922232610202	0.77936887297425
17	59447520	59454648	3	gain	AAA	74.5438	germline	1	0.00270581056392029	0.00496494088496158
17	65380392	65423160	2	neutral	AA	54.5678	somatic	0	0.3665504188937	0.414060341483269
17	66623040	66653928	2	neutral	AA	100	somatic	0	0.0575851220627223	0.115929144570791
17	66796488	66798864	7	gain	AAAABBB	40.6752	germline	1	0.0832738198359777	0.270053081005406
17	69369696	69388704	2	neutral	AA	54.5678	somatic	0	0.732673861175175	0.7905771422729
17	82585008	82587384	4	gain	AABB	18.6957	germline	1	0.0832778903695833	0.270060150471935
18	3345408	3350160	2	neutral	AA	100	somatic	0	0.324743625300871	0.794345975782183
18	5305608	5307984	1	loss	A	-1	somatic	0	0.0833669008732008	0.270214702557091
18	5324616	5326992	1	loss	A	-1	germline	1	0.0833674828945763	0.270215712913732
18	8335008	8346888	2	neutral	AA	100	germline	1	0.573460201148539	0.831928461866484
18	11509344	11511720	1	loss	A	-1	somatic	0	0.11526956102342	0.32182786867708
18	12084336	12091464	2	neutral	AA	1.74429	germline	1	0.00695768723340829	0.0177212616401787
18	23196888	23211144	2	neutral	AA	100	somatic	0	0.259131171026836	0.169640519969052
18	26677728	26779896	2	neutral	AA	69.5035	germline	1	0.463105581418396	0.182929319113824
18	28329048	28345680	3	gain	AAB	20.5873	germline	1	4.75884176647193e-06	1.83489847649376e-06
18	29593080	29647728	2	neutral	AA	36.3915	germline	1	0.052064333470274	0.0584241756166581
18	30063528	30139560	2	neutral	AA	15.5268	germline	1	0.0630582924635465	0.195413286698817
18	34915320	34984224	2	neutral	AA	100	somatic	0	0.130241220365611	0.0770125913499138
18	36217368	36224496	2	neutral	AA	100	somatic	0	0.493285092871956	0.621691550706147
18	37776024	37783152	2	neutral	AA	8.11615	somatic	0	0.0112903083837881	0.0262404325988543
18	37811664	37818792	2	neutral	AA	54.5679	somatic	0	0.215369687879872	0.344399623406371
18	37833048	37861560	2	neutral	AA	71.1598	somatic	0	0.575623804961194	0.967060028238727
18	40075992	40083120	2	neutral	AA	54.5679	somatic	0	0.74347395954764	0.894973921257456
18	41283000	41290128	1	loss	A	-1	germline	1	0.0290728302698206	0.0570853289391771
18	42473376	42478128	1	loss	A	-1	germline	1	0.0258692705744834	0.055657366630689
18	44896896	45008568	2	neutral	AA	93.0713	somatic	0	0.367897952489991	0.461578577456437
18	46201320	46265472	2	neutral	AA	69.2276	somatic	0	0.185194262741658	0.25484623419357
18	49066776	49069152	3	gain	AAB	64.4655	germline	1	0.0833267493459825	0.270144994607286
18	49967280	49991040	2	neutral	AA	15.5908	somatic	0	0.177189436069031	0.281200243009579
18	53588304	53590680	4	gain	AABB	16.5387	germline	1	0.0832848688021818	0.2700722698717
18	56261304	56263680	1	loss	A	-1	germline	1	0.0892408313718045	0.280266450962614
18	57024000	57026376	4	gain	AABB	43.896	germline	1	0.0832848688021818	0.2700722698717
18	57278232	57282984	1	loss	A	-1	germline	1	0.0208581433325385	0.0549545883347037
18	57665520	57675024	2	neutral	AA	54.5678	somatic	0	0.491396649654248	0.791495015169441
18	60091416	60293376	2	neutral	AA	68.9361	somatic	0	0.379945114351057	0.852020062544778
18	61833024	61892424	2	neutral	AA	100	somatic	0	0.116164879679303	0.0190340092366635
18	65532456	65539584	3	gain	AAB	100	germline	1	0.00270214518244831	0.00496112308566943
18	66097944	66102696	1	loss	A	-1	germline	1	0.0201922926130661	0.0548129144267738
18	68350392	68400288	2	neutral	AA	100	somatic	0	0.659459287989229	0.754430566699567
18	70778664	70783416	2	neutral	AA	100	somatic	0	0.686663061123538	0.869760051378091
18	71173080	71206344	2	neutral	AA	22.1989	somatic	0	0.00108806015096219	0.00519568803709558
18	72235152	72268416	2	neutral	AA	100	germline	1	0.22127041134989	0.279526925604055
18	74615904	74618280	3	gain	-	-1	germline	1	0.083299990364522	0.270098529933109
18	76965768	76968144	3	gain	AAA	31.6277	germline	1	0.0832959189558967	0.27009145973324
18	76968144	76975272	2	neutral	AA	36.3895	somatic	0	0.118290342347289	0.401565089473198
18	78902208	78906960	1	loss	A	-1	germline	1	0.0207077483857897	0.0554202742313548
18	79199208	79201584	5	gain	AAABB	10.1077	germline	1	0.0832749828291328	0.270055100839201
18	79519968	79522344	1	loss	A	-1	somatic	0	0.0871308175569227	0.276688166147336
19	7448760	7451136	11	gain	AAAAAAABBBB	33.0601	germline	1	0.0832674236088048	0.270041972116647
19	8881488	8919504	2	neutral	AA	1.22478	germline	1	0.023097810857093	0.0876768927806095
19	8919504	8921880	1	loss	A	-1	germline	1	0.111080970843998	0.315425939983999
19	10197792	10202544	2	neutral	AA	100	somatic	0	0.143153915999183	0.275999698037047
19	11207592	11312136	2	neutral	AA	17.0178	somatic	0	0.010258126288003	0.0245938310676395
19	12407472	12504888	2	neutral	AA	39.5963	somatic	0	0.0772095705127341	0.0600841861044257
19	13384008	13395888	2	neutral	AA	54.5678	somatic	0	0.239238284694338	0.287811491597391
19	13847328	13875840	2	neutral	AA	49.7182	somatic	0	0.0136956958893602	0.0611601300820952
19	14370048	14374800	2	neutral	AA	36.3786	somatic	0	0.145222171444749	0.24839143666535
19	16986024	16988400	1	loss	A	-1	germline	1	0.125755654039294	0.337444528023728
19	19566360	19632888	2	neutral	AA	27.4085	somatic	0	0.0434547049578878	0.0581959426660017
19	21559824	21585960	2	neutral	AA	0.287799	germline	1	0.000619862821580671	0.0100230231443935
19	23227776	23301432	2	neutral	AA	29.2075	somatic	0	0.0183331449096503	0.0365278137940521
19	24330240	24406272	4	gain	AABB	0.200125	germline	1	1.09244256119356e-20	0
19	27243216	27324000	2	neutral	AA	3.29508	somatic	0	0.25189585522368	0.237981966933648
19	27338256	27340632	5	gain	AAABB	1.64464	germline	1	0.0832749828291328	0.270055100839201
19	27345384	27378648	5	gain	AAABB	0.193429	germline	1	4.24461776615069e-10	1.02299280158036e-11
19	27378648	27383400	4	gain	AABB	4.70477	germline	1	0.0143131272492605	0.0366459744295271
19	27383400	27400032	5	gain	AAABB	0.279539	germline	1	4.59672704890844e-06	1.66417729308144e-06
19	28611792	28616544	2	neutral	AA	6.1686	somatic	0	0.803400127634306	0.731738400994936
19	30624264	30636144	2	neutral	AA	36.3922	somatic	0	0.68249452805001	0.446901560551464
19	35119656	35136288	2	neutral	AA	54.5678	somatic	0	0.961783835813116	0.907758068062093
19	35362008	35369136	1	loss	A	-1	germline	1	0.00497970755131829	0.00829030490363558
19	35982144	36051048	2	neutral	AA	85.0362	somatic	0	0.987030026861939	0.746239724847963
19	39363192	39386952	2	neutral	AA	100	somatic	0	0.769923205070679	0.753343297965426
19	44946792	45025200	2	neutral	AA	21.8271	somatic	0	0.0086344430818969	0.0192575650639188
19	45450504	45457632	2	neutral	AA	54.5678	somatic	0	0.941079586772715	0.997320747565252
19	45661968	45685728	2	neutral	AA	27.9819	somatic	0	0.00828533187557886	0.00203381842757722
19	45982728	45994608	2	neutral	AA	100	somatic	0	0.513026236765111	0.777412920137645
19	48553560	48558312	2	neutral	AA	100	somatic	0	0.0866136256197384	0.192521477954948
19	49161816	49183200	2	neutral	AA	9.34221	somatic	0	0.893729181785139	0.99332697646848
19	50801256	50813136	2	neutral	AA	6.53806	somatic	0	0.743803524012642	0.868770061321225
19	52435944	52464456	2	neutral	AA	100	somatic	0	0.491479051466663	0.88820382685087
19	52885008	52892136	2	neutral	AA	54.5678	somatic	0	0.795706029103227	0.940091355000707
19	56097360	56123496	2	neutral	AA	10.5503	somatic	0	0.0181022279709755	0.0195637202534358
20	64152	66528	10	gain	-	-1	germline	1	0.0832680050675565	0.270042982001841
20	242352	247104	2	neutral	AA	100	somatic	0	0.121639113737398	0.313109225099888
20	1111968	1126224	2	neutral	AA	100	somatic	0	0.0014918733705371	0.00904569376536513
20	2627856	2682504	2	neutral	AA	86.8443	somatic	0	0.688795905231367	0.853190709269067
20	7256304	7482024	2	neutral	AA	100	somatic	0	0.0433974245912778	0.0560807489972295
20	12433608	12454992	2	neutral	AA	100	somatic	0	0.320880398362123	0.221892748703822
20	14153832	14163336	2	neutral	AA	54.5678	somatic	0	0.214284418453947	0.261951900998357
20	22662288	22681296	2	neutral	AA	100	somatic	0	0.0219002891970494	0.127098914784725
20	23070960	23130360	2	neutral	AA	21.8283	somatic	0	0.00705787689691053	0.00224498315112409
20	23308560	23626944	2	neutral	AA	10.9294	somatic	0	1.80477142434184e-12	7.09305947310668e-11
20	26207280	28763856	2	neutral	AA	0.758332	somatic	0	0.48787274105347	0.38294579032606
20	28773360	28787616	6	gain	-	-1	germline	1	0.00270052315326612	0.00495854198286416
20	28804248	29205792	9	gain	-	-1	somatic	0	4.2428717122678e-10	1.02359232201366e-11
20	29205792	29260440	1	loss	A	-1	germline	1	0.00412347121062245	0.00292597264151007
20	29262816	29265192	16	gain	-	-1	germline	1	0.0832674236088048	0.270041972116647
20	29407752	29410128	5	gain	-	-1	germline	1	0.0832767273435351	0.270058130610571
20	29890080	29894832	3	gain	-	-1	germline	1	0.014315238299802	0.0366498438922749
20	30149064	30168072	1	loss	A	-1	germline	1	0.000171162422890284	0.00125600082014865
20	31165992	31168368	6	gain	-	-1	germline	1	0.0832744013309107	0.270054090920925
20	31168368	31182624	3	gain	-	-1	germline	1	0.00019341983623525	0.000613395460440702
20	31182624	31189752	6	gain	-	-1	germline	1	0.00270045628456958	0.00495854198286416
20	31189752	31239648	3	gain	AAB	1.5474	somatic	0	1.21463127962658e-06	7.10094088862689e-07
20	31239648	31242024	60	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBB	83.0573	germline	1	0.0832656792522847	0.270038942477608
20	31242024	31244400	4	gain	AAAA	2.95378	germline	1	0.0832807979922678	0.270065200173591
20	31244400	31246776	3	gain	AAB	100	germline	1	0.0837342269691097	0.27085177359073
20	32056992	32087880	2	neutral	AA	100	somatic	0	0.954139118795257	0.779243109326386
20	36260136	36262512	2	neutral	AA	100	somatic	0	0.644298937176792	0.817405882229351
20	36837504	36839880	2	neutral	AA	100	germline	1	0.24595305729937	0.488495515982033
20	41275872	41278248	1	loss	A	-1	somatic	0	0.1244882738704	0.335586946082025
20	43642368	43647120	1	loss	A	-1	germline	1	0.0148333115793328	0.0382131108391514
20	44214984	44452584	2	neutral	AA	48.2256	somatic	0	0.119114055728731	0.189995066886114
20	48936096	48959856	2	neutral	AA	36.538	somatic	0	0.868910186984272	0.893364760033096
20	49615632	49618008	5	gain	AAABB	50.4434	germline	1	0.0832749828291328	0.270055100839201
20	51057864	51062616	2	neutral	AA	27.838	germline	1	0.893744445242615	0.988425040255001
20	51233688	51240816	2	neutral	AA	27.2839	somatic	0	0.235731888963782	0.219276213309816
20	51853824	51865704	2	neutral	AA	100	somatic	0	0.819685240417073	0.758334073531527
20	52286256	52314768	2	neutral	AA	100	germline	1	0.874002899009989	0.804297709578646
20	52549992	52569000	2	neutral	AA	100	somatic	0	0.128393508588777	0.137115989999386
20	57522960	57579984	2	neutral	AA	36.3828	somatic	0	0.00281949973261973	0.0133600782763216
20	57831840	57895992	2	neutral	AA	100	somatic	0	0.0254557927553368	0.157031157234517
20	61374456	61566912	2	neutral	AA	4.63413	germline	1	0.0124871366310112	0.0206949059105668
20	61854408	61871040	2	neutral	AA	21.4289	somatic	0	0.438343367270823	0.552111594638142
20	62146656	62175168	2	neutral	AA	100	somatic	0	0.155595623430035	0.0466033345331548
20	64087848	64090224	5	gain	AAAAA	16.2777	germline	1	0.0832755643306443	0.270056110760234
20	64092600	64094976	1	loss	A	-1	germline	1	0.0835404889456416	0.27051591085436
21	8988408	8995536	9	gain	AAAAAABBB	0.679659	germline	1	0.00270030583553417	0.00495831759732546
21	10271448	10273824	61	gain	-	-1	germline	1	0.0832656792522847	0.270038942477608
21	10637352	10639728	4	gain	AAAB	13.6223	somatic	0	0.0832807979922678	0.270065200173591
21	10651608	10653984	5	gain	AAAAB	68.9509	germline	1	0.0832749828291328	0.270055100839201
21	10653984	10661112	7	gain	AAAAABB	7.48624	germline	1	0.00270047300160187	0.00495854198286416
21	10661112	10665864	5	gain	AAABB	14.6432	germline	1	0.014309456511103	0.0366368549672764
21	10665864	10668240	7	gain	AAAAAAA	12.149	germline	1	0.0832732383443341	0.270052071092643
21	10668240	10692000	5	gain	AAABB	2.21473	germline	1	4.32593629060595e-08	4.12650669190384e-09
21	10692000	10694376	54	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBB	100	germline	1	0.083266260701169	0.270039952354531
21	10694376	10701504	4	gain	AAAB	6.23121	germline	1	0.00270092439721972	0.00495882247787716
21	10701504	10732392	6	gain	AAAABB	0.874641	germline	1	4.24375694772567e-10	1.02299280158036e-11
21	10732392	10739520	5	gain	AAAAB	79.3647	germline	1	0.00270070704998317	0.00495854198286416
21	10753776	10756152	11	gain	AAAAAAABBBB	3.09583	germline	1	0.0832674236088048	0.270041972116647
21	10763280	10765656	4	gain	AAAB	9.3252	germline	1	0.0832877766222338	0.270077319738771
21	15434496	15436872	2	neutral	AA	100	somatic	0	0.449852222638819	0.680873400905904
21	16589232	16601112	2	neutral	AA	54.5788	somatic	0	0.839746630942807	0.456075855484416
21	16681896	16717536	2	neutral	AA	93.3662	somatic	0	0.0631222109056504	0.0386493625147675
21	17456472	17461224	2	neutral	AA	100	somatic	0	0.663981177015163	0.559960589958694
21	17879400	17881776	2	neutral	AA	100	somatic	0	0.682070601882809	0.839255019641386
21	17948304	17957808	2	neutral	AA	54.5679	germline	1	0.250370353298965	0.497956854325919
21	17964936	17988696	2	neutral	AA	100	germline	1	0.506344777000155	0.902686757096922
21	18081360	18095616	2	neutral	AA	54.6088	somatic	0	0.535254636988476	0.690463535292865
21	18504288	18506664	2	neutral	AA	100	somatic	0	0.204599922769008	0.441051330215729
21	19231344	19238472	2	neutral	AA	93.3502	somatic	0	0.140919956139039	0.104544608993428
21	19939392	19984536	2	neutral	AA	27.3958	somatic	0	0.206961099240878	0.540827450975102
21	22586256	22588632	2	neutral	AA	100	somatic	0	0.177739761720932	0.408017861153802
21	23501016	23503392	2	neutral	AA	100	somatic	0	0.537881328812185	0.747772437201013
21	23902560	23904936	2	neutral	AA	100	somatic	0	0.19621381733593	0.430945206203193
21	24114024	24123528	2	neutral	AA	100	somatic	0	0.367081158596233	0.655031944589718
21	24465672	24484680	2	neutral	AA	100	somatic	0	0.17728041703279	0.204520703159397
21	24795936	25024032	2	neutral	AA	100	somatic	0	0.00390822235226157	0.00502239319734255
21	25580016	25639416	2	neutral	AA	76.3058	somatic	0	0.372575515697829	0.484480625274027
21	25819992	25839000	2	neutral	AA	100	germline	1	0.0676839249266105	0.121441525740984
21	25855632	25917408	2	neutral	AA	88.7881	somatic	0	0.361067755006348	0.227183230387524
21	28699704	28704456	2	neutral	AA	100	somatic	0	0.147076723588315	0.192783006077451
21	28861272	28868400	2	neutral	AA	54.5678	somatic	0	0.947866338096692	0.981228515929697
21	29350728	29353104	2	neutral	AA	100	somatic	0	0.152895336360657	0.375553595973163
21	29707128	29735640	2	neutral	AA	23.2532	somatic	0	0.962233800375723	0.961213547259119
21	30149064	30210840	2	neutral	AA	84.9405	somatic	0	0.923737144218769	0.880407227483416
21	31779000	31805136	2	neutral	AA	30.073	germline	1	0.982187094768661	0.999959194399932
21	32028480	32030856	3	gain	AAB	68.4739	somatic	0	0.0833250039828002	0.270141964124622
21	32128272	32130648	2	neutral	AA	100	somatic	0	0.523808768513233	0.737647554165232
21	33069168	33100056	2	neutral	AA	100	germline	1	0.41710036322777	0.687027842112343
21	34214400	34216776	2	neutral	AA	100	somatic	0	0.278023833859042	0.522924334113335
21	35362008	35364384	2	neutral	AA	100	somatic	0	0.577443954940847	0.775076691378553
21	36029664	36034416	2	neutral	AA	12.5489	somatic	0	0.0343944729706213	0.0675748409344982
21	36481104	36497736	2	neutral	AA	15.8089	somatic	0	0.986841204099879	0.774346389059444
21	36828000	36984816	2	neutral	AA	54.7239	somatic	0	0.328605897472051	0.196170988717127
21	37210536	37212912	2	neutral	AA	100	somatic	0	0.457852870423465	0.687321716527243
21	38503080	38505456	2	neutral	AA	100	somatic	0	0.214687780646824	0.453053723517405
21	38743056	38745432	2	neutral	AA	27.2839	somatic	0	0.978144979013597	0.958665524404709
21	38911752	38916504	2	neutral	AA	21.5177	somatic	0	0.739494672804501	0.981186095541658
21	39082824	39085200	2	neutral	AA	100	germline	1	0.171157544421841	0.39961123466046
21	41473080	41475456	1	loss	A	-1	somatic	0	0.086716629407786	0.275981626479994
21	41565744	41568120	2	neutral	AA	54.5678	germline	1	0.358738860835016	0.602098814838871
21	41686920	41689296	2	neutral	AA	100	somatic	0	0.210536053859984	0.448126941134819
21	41805720	41808096	4	gain	AAAA	30.8444	germline	1	0.0832778903695833	0.270060150471935
21	42145488	42147864	2	neutral	AA	54.5678	somatic	0	0.128592563892574	0.341584927685186
21	42715728	42720480	1	loss	A	-1	germline	1	0.0228930379412863	0.0558558752313666
21	43262208	43264584	5	gain	AAAAB	100	germline	1	0.0832749828291328	0.270055100839201
21	43335864	43338240	4	gain	AAAA	5.02287	germline	1	0.0832784718875415	0.270061160406752
21	43718400	43720776	2	neutral	AA	100	somatic	0	0.467685481452789	0.695162016773909
21	44464464	44469216	2	neutral	AA	42.2184	somatic	0	0.571464308215525	0.940576403796639
21	44561880	44573760	2	neutral	AA	100	somatic	0	0.747114078851332	0.921692497647517
21	44789976	44827992	2	neutral	AA	100	germline	1	0.451036813266644	0.58811919942635
21	44975304	44980056	2	neutral	AA	20.2631	somatic	0	0.72574096242963	0.924675089571953
21	45386352	45388728	2	neutral	AA	100	somatic	0	0.625135552370466	0.805777253311116
21	45433872	45443376	2	neutral	AA	100	somatic	0	0.921234251983131	0.94195567242358
22	0	10727640	3	gain	AAB	-1	somatic	0	NA	NA
22	10727640	10730016	10	gain	-	-1	germline	1	0.0832680050675565	0.270042982001841
22	10730016	11625768	3	gain	AAB	-1	somatic	0	0.0143105576453454	0.0366387892327243
22	11625768	11630520	4	gain	AABB	100	germline	1	0.0143109247067027	0.0366390655636535
22	11630520	15935832	3	gain	AAB	-1	somatic	0	NA	NA
22	15935832	15938208	3	gain	-	-1	germline	1	0.083306388618056	0.270109640520128
22	15938208	16258968	3	gain	AAB	-1	somatic	0	0.968071083245018	0.99547458457456
22	16268472	16558344	3	gain	AAB	-1	germline	1	NA	NA
22	16558344	16814952	3	gain	AAB	1.78336	germline	1	2.18702607778015e-17	0
22	16814952	16819704	3	gain	AAB	23.9364	germline	1	0.0143635921311251	0.0367818957705049
22	17658432	17663184	1	loss	A	-1	somatic	0	0.0251745081716416	0.0569320571980306
22	17874648	17879400	3	gain	AAA	3.01946	germline	1	0.0143175332314697	0.0366495674902241
22	19908504	19944144	2	neutral	AA	100	somatic	0	0.156739274405281	0.236375087034048
22	20238768	20262528	2	neutral	AA	100	somatic	0	0.0036518183075564	0.0119085699698042
22	26929584	26953344	2	neutral	AA	54.5681	somatic	0	0.736360350942634	0.446215641348847
22	29117880	29122632	3	gain	AAB	44.1993	germline	1	0.0143166152198611	0.0366548194410752
22	29236680	29239056	0	loss	-	-1	germline	1	0.0832680050675565	0.270042982001836
22	34105104	34116984	2	neutral	AA	100	somatic	0	0.555416806215195	0.669948707390068
22	34577928	34580304	1	loss	A	-1	germline	1	0.117056584466778	0.324528629190732
22	35136288	35195688	2	neutral	AA	100	somatic	0	0.533506017849886	0.557423427134691
22	35247960	35250336	1	loss	A	-1	somatic	0	0.092047154400039	0.284973735198816
22	36749592	36751968	0	loss	-	-1	germline	1	0.083266260701169	0.270039952354526
22	38244096	38248848	2	neutral	AA	54.5678	somatic	0	0.809429585730801	0.894796591691603
22	40327848	40356360	2	neutral	AA	54.5678	somatic	0	0.00175652725716399	0.00096882293514311
22	40895712	40919472	2	neutral	AA	100	germline	1	0.191317940808019	0.408252483183785
22	45326952	45329328	3	gain	AAB	4.75858	somatic	0	0.0833168593461632	0.270127822200275
22	46130040	46151424	2	neutral	AA	100	somatic	0	0.365649214436843	0.389335581951394
22	46590984	46650384	2	neutral	AA	63.5308	somatic	0	0.219827485666757	0.431288487533583
22	46940256	46942632	1	loss	A	-1	germline	1	0.102428818614409	0.301875721956711
22	48603456	48608208	2	neutral	AA	15.2585	somatic	0	0.929281588552286	0.988490108600624
X	3523608	3525984	2	gain	-	-1	germline	1	0.08594371554892	0.274660392427017
X	58487616	58489992	0	loss	-	-1	germline	1	0.0832650978066895	0.270037932603436
Y	10746648	10749024	7	gain	-	-1	germline	1	0.0832738198359777	0.270053081005406
Y	10749024	10758528	3	gain	-	-1	germline	1	0.00053788763151834	0.000682227261749047
Y	10758528	10763280	7	gain	-	-1	germline	1	0.0143085389563283	0.036636026023721
Y	10763280	10775160	3	gain	-	-1	germline	1	0.000204312369346694	0.000596579355709781
Y	10775160	10777536	7	gain	-	-1	germline	1	0.0832738198359777	0.270053081005406
Y	10777536	10784664	2	gain	-	-1	germline	1	0.50580722796871	0.305103540846018
Y	10784664	10803672	4	gain	-	-1	somatic	0	9.70346720478164e-07	2.31485780544105e-07
Y	10803672	10901088	2	gain	-	-1	somatic	0	0.00562151746463269	1.04688583568713e-06
Y	10924848	10927224	6	gain	-	-1	germline	1	0.0832744013309107	0.270054090920925
Y	10927224	10934352	2	gain	-	-1	germline	1	0.616362615653535	0.939483879336519
Y	10934352	10936728	7	gain	-	-1	germline	1	0.0832732383443341	0.270052071092643
Y	10936728	10986624	2	gain	-	-1	somatic	0	1.09675867399338e-06	2.81649354638702e-06
Y	10986624	10989000	20	gain	-	-1	germline	1	0.0832668421533424	0.270040962234211
Y	10989000	10998504	3	gain	-	-1	germline	1	0.000825128005521015	0.00185254663944279
Y	10998504	11000880	9	gain	-	-1	germline	1	0.0832691679949272	0.270045001780499
Y	11003256	11012760	2	gain	-	-1	germline	1	0.693681874649409	0.777695404562194
Y	11012760	11015136	26	gain	-	-1	germline	1	0.0832668421533424	0.270040962234211
Y	11015136	11041272	2	gain	AA	61.3786	somatic	0	0.0499772026439624	0.0301202998042096
Y	11290752	11333520	18	gain	AAAAAAAAAAAABBBBBB	1.15879	somatic	0	4.24115093705462e-10	1.02294839265937e-11
Y	11530728	11533104	24	gain	AAAAAAAAAAAAAAAAAAAAAAAB	33.4971	germline	1	0.0832668421533424	0.270040962234211
Y	11687544	11692296	6	gain	AAAABB	8.88955	germline	1	0.014308814217311	0.0366374076054303
Y	11716056	11720808	3	gain	AAB	100	germline	1	0.886387551188758	0.69942884581093
Y	11720808	11725560	23	gain	AAAAAAAAAAAAAAABBBBBBBB	34.1525	germline	1	0.0143067040024792	0.0366324341246045
Y	11725560	11746944	2	gain	AA	3.21441	somatic	0	0.0979197183958752	0.00919844383740109
Y	11746944	11749320	12	gain	AAAAAAAABBBB	3.14379	germline	1	0.0832674236088048	0.270041972116647
Y	26637336	26642088	6	gain	AAAABB	16.0342	germline	1	0.014309456511103	0.0366376839272423
Y	26642088	26656344	2	gain	AA	16.6886	germline	1	0.0222155241515	0.107565077033483
Y	56826792	56850552	12	gain	AAAAAAAABBBB	4.49303	somatic	0	2.03547169539451e-07	3.04749535606774e-08
