chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	1339576	1384900	2	neutral	AA	10.1404	somatic	0	0.0482234912747958	0.0615009315694579
1	5668018	5678090	3	gain	AAB	0.568234	germline	1	0.000542191974343937	0.000686527622682953
1	16611246	16636426	7	gain	AAAAABB	7.45992	germline	1	0.000107560266794607	9.08279301620185e-05
1	16722038	16724556	5	gain	AAAAB	63.6535	germline	1	0.0832780459668742	0.270060391478033
1	16883190	16943622	3	gain	AAB	0.933572	germline	1	9.42350049414317e-09	5.79348680140868e-10
1	18602984	18643272	2	neutral	AA	27.2839	somatic	0	0.193867667388114	0.216959539541088
1	29770314	29772832	4	gain	AABB	55.7525	somatic	0	0.0832811211075594	0.270065732103413
1	31266006	31293704	2	neutral	AA	100	somatic	0	0.742655655943602	0.628744519344717
1	31429676	31432194	10	gain	AAAAAAAAAA	7.85503	germline	1	0.0832725109454343	0.270050778546622
1	32648388	32673568	2	neutral	AA	54.5786	somatic	0	0.833406983995969	0.526300389619917
1	44795220	44797738	5	gain	AAABB	24.5984	somatic	0	0.0832768159363552	0.270058255249467
1	45422202	45497742	2	neutral	AA	29.105	somatic	0	0.703032988299515	0.832444596009489
1	46774368	46781922	3	gain	AAB	35.0472	somatic	0	0.0182176814250661	0.0486183440920892
1	51981592	52042024	2	neutral	AA	36.3786	somatic	0	0.118960703994361	0.0844485326555322
1	55662908	55667944	0	loss	-	-1	germline	1	0.0143123802043802	0.0366503420621588
1	61587762	61743878	2	neutral	AA	100	somatic	0	0.844144723738933	0.480501990917206
1	67351464	67447148	2	neutral	AA	100	somatic	0	0.445225992860739	0.673092435843564
1	72289262	72301852	1	loss	A	-1	somatic	0	0.000500869654334212	0.000461730820140782
1	75557626	75884966	2	neutral	AA	98.1223	somatic	0	0.294047211399017	0.234688455782969
1	75884966	75887484	11	gain	-	-1	somatic	0	0.083271895961448	0.27004971045855
1	96648394	96749114	2	neutral	AA	19.7102	somatic	0	0.883896708873982	0.570856288602717
1	104867146	104872182	1	loss	A	-1	somatic	0	0.021880652412561	0.0601677378537087
1	106730466	106861402	2	neutral	AA	24.1446	somatic	0	0.183403150122776	0.215114131791305
1	107523636	107531190	1	loss	A	-1	somatic	0	0.00412854362043312	0.0075494166997998
1	112103878	112106396	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
1	118577656	118585210	2	neutral	AA	100	somatic	0	0.513138949597387	0.907660887365129
1	125026254	125038844	5	gain	-	-1	germline	1	0.000532297614391831	0.000671171484414756
1	125038844	125046398	4	gain	-	-1	germline	1	0.0143158748064793	0.0366509267267775
1	125069060	125076614	4	gain	-	-1	germline	1	0.00270312987109016	0.00496513201412396
1	125079132	125084168	10	gain	-	-1	germline	1	0.0143080130099741	0.0366354358711852
1	125157190	125162226	3	gain	-	-1	germline	1	0.0160463259132011	0.0411244418567878
1	125162226	125164744	6	gain	-	-1	germline	1	0.0832737409244443	0.270052914732016
1	151495470	151508060	2	neutral	AA	36.3786	somatic	0	0.790437938389026	0.980879604674284
1	152789722	152797276	1	loss	A	-1	somatic	0	0.00360473900121109	0.00657821440660811
1	155907006	155959884	2	neutral	AA	22.3324	germline	1	0.290433012590834	0.139657050316473
1	159865302	159875374	2	neutral	AA	54.5678	germline	1	0.347683660641174	0.269089060858783
1	175026180	175028698	5	gain	AAABB	20.057	somatic	0	0.0832780459668742	0.270060391478033
1	188847482	188850000	4	gain	AAAB	100	somatic	0	0.0832792760121103	0.270062527718934
1	191997500	192005054	1	loss	A	-1	somatic	0	0.00574852554715035	0.0101653357040387
1	194097512	194100030	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
1	195832414	195834932	17	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
1	196436734	196439252	4	gain	AABB	49.8133	somatic	0	0.0832798910402473	0.27006359584401
1	202958354	202965908	2	neutral	AA	100	somatic	0	0.969311838465618	0.827300419917927
1	208983928	209464866	2	neutral	AA	36.4233	somatic	0	0.000605754883061981	0.00992757822241319
1	209902998	209913070	1	loss	A	-1	somatic	0	0.00141573960549538	0.00213042592599799
1	215208424	215210942	4	gain	AAAB	100	somatic	0	0.0832792760121103	0.270062527718934
1	217940454	217963116	2	neutral	AA	100	somatic	0	0.322911287616556	0.290126389048387
1	222611344	222626452	2	neutral	AA	100	somatic	0	0.223749481771281	0.264115996075975
1	228153462	228239074	2	neutral	AA	22.0064	somatic	0	0.773123470358393	0.735812362694287
1	234775802	234783356	6	gain	AAAABB	7.94923	germline	1	0.00270075954933505	0.00495877976507642
1	236095234	236097752	8	gain	AAAAABBB	11.15	germline	1	0.0832725109454343	0.270050778546622
1	238640932	238643450	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
1	246197450	246293134	2	neutral	AA	10.8396	somatic	0	0.018944134864047	0.0539574500628153
1	248587032	248632356	1	loss	A	-1	germline	1	6.55761507871307e-12	3.40838468559923e-14
2	3180234	3182752	7	gain	-	-1	germline	1	0.0832731259330997	0.270051846637777
2	4164772	4174844	1	loss	A	-1	germline	1	0.000885375278791963	0.00126323470863443
2	13692884	13695402	8	gain	-	-1	somatic	0	0.0832725109454343	0.270050778546622
2	13818784	13821302	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
2	30422476	30432548	2	neutral	AA	100	somatic	0	0.361237760545253	0.368643373452499
2	31306294	31323920	2	neutral	AA	27.2839	somatic	0	0.98171956187009	0.997400628312623
2	35745528	35765672	1	loss	A	-1	germline	1	2.46491478995331e-05	9.43726089497332e-06
2	35954522	35957040	2145	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB	100	somatic	0	0.0832651313804189	0.270037961693283
2	39006338	39011374	2	neutral	AA	100	somatic	0	0.428446801388767	0.348805633233328
2	41010666	41023256	1	loss	A	-1	germline	1	0.000200859502656287	0.00018099433634744
2	43513558	43516076	5	gain	AAAAB	4.41325	somatic	0	0.0832762009266145	0.270057187139809
2	53877646	54235202	2	neutral	AA	100	somatic	0	0.474226563124137	0.0500050683058859
2	55174416	55194560	2	neutral	AA	54.5678	somatic	0	0.125405301986134	0.311427842165194
2	65729872	65742462	2	neutral	AA	100	somatic	0	0.30122972818986	0.135804379223869
2	67079520	67139952	2	neutral	AA	55.0709	somatic	0	0.703954953722546	0.539781355730394
2	70300042	70317668	2	neutral	AA	100	somatic	0	0.531883995084363	0.663638881653248
2	88920652	89003746	2	neutral	AA	0.460622	somatic	0	0.888825300135376	0.850428375558898
2	89003746	89771736	2	neutral	AA	-1	somatic	0	NA	NA
2	89771736	89789362	6	gain	-	-1	germline	1	4.59626253034523e-06	1.66400953294232e-06
2	89789362	89796916	4	gain	AAAA	75.1344	germline	1	0.00270714960490369	0.00497863298551593
2	89796916	89814542	5	gain	AAAAA	0.950189	germline	1	2.2106608888685e-05	1.22951900719537e-05
2	89814542	89819578	4	gain	AAAA	25.1695	germline	1	0.0143285976287839	0.0366924587781379
2	89819578	89842240	31	gain	AAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	5.72163	germline	1	2.03558755995728e-07	3.04834760767037e-08
2	89842240	89849794	4	gain	AABB	15.0733	germline	1	0.00270205060841568	0.00496103485045651
2	89849794	90063824	2	neutral	AA	-1	somatic	0	NA	NA
2	90063824	90209868	2	neutral	AA	3.40615	somatic	0	0.895323605377487	0.865501804752231
2	91410954	91415990	5	gain	-	-1	germline	1	0.0143095656555141	0.0366371892653546
2	98365670	98375742	2	neutral	AA	100	somatic	0	0.807025122652991	0.862166736826783
2	118867226	118869744	5	gain	AAABB	29.2855	somatic	0	0.083277430949775	0.270059323362208
2	121120836	121148534	2	neutral	AA	37.94	somatic	0	0.323682321577498	0.627349479226725
2	123356820	123359338	19	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
2	132240324	132245360	4	gain	AABB	2.62603	somatic	0	0.0143732547982398	0.0368275756594805
2	132273058	132280612	2	neutral	AA	1.15358	somatic	0	0.0942324020445769	0.223414056535095
2	134181702	134239616	2	neutral	AA	4.66501	somatic	0	0.196881531710805	0.194225598161268
2	141330304	141355484	2	neutral	AA	100	somatic	0	0.792489443319057	0.987758508885763
2	142846140	142929234	2	neutral	AA	36.3787	somatic	0	0.225400771206526	0.643043885395391
2	152928212	152930730	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
2	154937576	154942612	1	loss	A	-1	somatic	0	0.0220268006476214	0.0606341552759819
2	159074650	159119974	2	neutral	AA	36.5219	somatic	0	0.164011306122384	0.521663360500469
2	159346594	159376810	2	neutral	AA	100	somatic	0	0.896433656362755	0.730075053271331
2	166822536	166825054	9	gain	-	-1	somatic	0	0.0832725109454343	0.270050778546622
2	167399158	167411748	2	neutral	AA	54.8558	somatic	0	0.866714813452237	0.730006795931752
2	169463918	169468954	0	loss	-	-1	germline	1	0.0143123802043802	0.0366503420621588
2	189031296	189058994	2	neutral	AA	100	somatic	0	0.603369117092833	0.752276577219559
2	194165498	194170534	1	loss	A	-1	somatic	0	0.0317013060907337	0.0593638998928814
2	194490320	194492838	8	gain	AAAAABBB	26.756	somatic	0	0.0832725109454343	0.270050778546622
2	196927744	196985658	2	neutral	AA	36.3786	somatic	0	0.790361146218777	0.619673952964038
2	202575618	202588208	2	neutral	AA	15.5918	somatic	0	0.539252034863902	0.943916185549256
2	208807668	208852992	2	neutral	AA	54.5704	somatic	0	0.0681964975683334	0.0231571324245775
2	211051206	211053724	23	gain	AAAAAAAAAAAABBBBBBBBBBB	100	somatic	0	0.0832682061347918	0.270043301994876
2	211134300	211136818	8	gain	AAAABBBB	72.796	somatic	0	0.0832725109454343	0.270050778546622
2	212204450	212325314	2	neutral	AA	100	somatic	0	0.118490896355917	0.132098795050132
2	219345498	219370678	2	neutral	AA	100	somatic	0	0.632162988653353	0.871828296883637
2	221725008	221727526	16	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
2	235163574	235203862	2	neutral	AA	19.7189	somatic	0	0.918395645543921	0.208071110155256
3	1505764	1525908	2	neutral	AA	100	somatic	0	0.000492810089995195	0.00186241191251746
3	1609002	1644254	2	neutral	AA	27.4549	somatic	0	0.980189786830191	0.636928257483202
3	1704686	1709722	1	loss	A	-1	somatic	0	0.0269573846191914	0.0765734246391779
3	5028446	5036000	2	neutral	AA	100	somatic	0	0.284421009049368	0.323176816747115
3	8072708	8075226	4	gain	AAAB	8.17018	somatic	0	0.0832792760121103	0.270062527718934
3	15249008	15281742	2	neutral	AA	54.5678	germline	1	0.975997703226593	0.891747544514614
3	18786798	18789316	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
3	22377466	22518474	2	neutral	AA	34.2576	somatic	0	0.221689977608416	0.198848968064983
3	37140500	37168198	2	neutral	AA	54.568	somatic	0	0.0507893772602387	0.139564911139351
3	39718932	39721450	5	gain	-	-1	somatic	0	0.0832786609876526	0.270061459596942
3	46741634	46769332	2	neutral	AA	100	somatic	0	0.53272260259621	0.959175798350566
3	47824374	47839482	2	neutral	AA	36.38	somatic	0	0.768996362296486	0.786362366313462
3	49639852	49670068	2	neutral	AA	100	somatic	0	0.00451496627241681	0.0341794745833237
3	52993828	53003900	1	loss	A	-1	germline	1	0.000814953237918621	0.00100464437737702
3	56967232	56969750	12	gain	AAAAAAAABBBB	54.1688	somatic	0	0.0832706660045129	0.270047574291657
3	62796402	62806474	2	neutral	AA	100	somatic	0	0.982472835694939	0.992282192937244
3	62922302	62929856	2	neutral	AA	54.5678	somatic	0	0.631973088236548	0.84304861379976
3	69786370	69824140	2	neutral	AA	100	somatic	0	0.370750990529784	0.540605894924446
3	72485666	72495738	2	neutral	AA	100	somatic	0	0.409797255027252	0.792474063099209
3	74215532	74223086	2	neutral	AA	100	somatic	0	0.0412713411148533	0.0358542154796717
3	74585678	74693952	2	neutral	AA	28.4567	somatic	0	0.920133766413837	0.849330814046105
3	75555108	75930290	2	neutral	AA	0.233805	somatic	0	0.00153021577870357	0.00348268989325917
3	77773466	77788574	3	gain	AAB	1.28772	germline	1	3.88275456966075e-05	2.81649371189907e-05
3	79747578	79850816	2	neutral	AA	55.0905	somatic	0	2.03809689341813e-05	1.65458961632892e-05
3	80633914	80759814	2	neutral	AA	58.619	somatic	0	0.782643457626032	0.523033343941324
3	82464500	82467018	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
3	87367046	87492946	2	neutral	AA	100	somatic	0	0.695541463350842	0.861845667768051
3	90272818	90509510	2	neutral	AA	0.724232	somatic	0	2.8833243571382e-40	0
3	90509510	90710950	3	gain	-	-1	somatic	0	1.65767569301422e-41	0
3	102502744	102507780	2	neutral	AA	100	somatic	0	0.19166282694979	0.279826797665343
3	102772170	102794832	2	neutral	AA	100	somatic	0	0.823910861177661	0.952487972771108
3	103049150	103081884	2	neutral	AA	56.0518	somatic	0	0.522143578230345	0.35868143237395
3	114503532	114516122	2	neutral	AA	100	somatic	0	0.457651205173831	0.336168613453466
3	128478432	128498576	2	neutral	AA	100	somatic	0	0.21187294719327	0.157857344591038
3	132001114	132006150	2	neutral	AA	100	somatic	0	0.225057943425356	0.523758640578568
3	132230252	132270540	2	neutral	AA	100	somatic	0	0.00808993640848222	0.0187767101497843
3	142030308	142050452	2	neutral	AA	54.5678	somatic	0	0.424253559614825	0.760419774289361
3	144628884	144666654	2	neutral	AA	100	somatic	0	0.571056023862941	0.448774962696213
3	146665946	146676018	1	loss	A	-1	germline	1	0.00544141337850753	0.0103841544951571
3	155526788	155554486	2	neutral	AA	54.5678	somatic	0	0.00880086024104575	0.00353776202169487
3	155912042	155967438	2	neutral	AA	37.5825	somatic	0	0.277436307076872	0.330397348764713
3	161514592	161527182	2	neutral	AA	12.2714	somatic	0	0.663124808490543	0.888954399498306
3	162808844	162826470	1	loss	A	-1	germline	1	1.07681615937337e-05	5.47986583054882e-06
3	169083700	169108880	2	neutral	AA	100	germline	1	0.761138125065023	0.785421256615131
3	170680112	170705292	2	neutral	AA	54.5678	somatic	0	0.158886927551945	0.577903806242689
3	171652060	171788032	2	neutral	AA	100	somatic	0	0.0741464700168851	0.314818355705117
3	172583720	172588756	2	neutral	AA	100	somatic	0	0.140822799479167	0.164144356135694
3	175582658	175620428	2	neutral	AA	100	somatic	0	0.409851952386346	0.397103134881552
3	176222230	176224748	14	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
3	181366504	181369022	4	gain	AABB	90.1645	somatic	0	0.0832792760121103	0.270062527718934
3	185453218	185455736	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
3	186248906	186264014	2	neutral	AA	100	somatic	0	0.961722580482009	0.633785040683096
3	193538516	193551106	2	neutral	AA	30.9039	somatic	0	0.867281160613031	0.996888298352941
4	125900	135972	1	loss	A	-1	germline	1	0.00544249938374566	0.0100873211337537
4	553960	556478	5	gain	AAABB	5.40928	germline	1	0.083277430949775	0.270059323362208
4	7156156	7168746	2	neutral	AA	23.2691	somatic	0	0.156685327138366	0.199584469056567
4	7863714	7866232	5	gain	AAABB	4.1128	germline	1	0.0832755859205531	0.270056119033236
4	14836056	14838574	7	gain	AAAABBB	4.89022	somatic	0	0.0832731259330997	0.270051846637777
4	21800844	21826024	2	neutral	AA	100	somatic	0	0.581334819982833	0.714744266240141
4	24872804	24880358	2	neutral	AA	100	somatic	0	0.767612900734532	0.994000474480862
4	25555182	25577844	3	gain	AAB	1.56876	germline	1	2.06046811916571e-07	3.10253589486109e-08
4	35501282	35526462	2	neutral	AA	100	somatic	0	0.000246515925841667	0.000476249313687838
4	38366766	38396982	2	neutral	AA	54.5721	somatic	0	0.333986413201341	0.223148337609792
4	40293036	40295554	5	gain	AAABB	93.761	germline	1	0.0832755859205531	0.270056119033236
4	43450608	43465716	2	neutral	AA	100	somatic	0	0.0101905906048727	0.017850634903577
4	43780466	43782984	4	gain	AAAB	100	somatic	0	0.0832792760121103	0.270062527718934
4	55957514	55992766	2	neutral	AA	36.3786	somatic	0	0.845961200086925	0.902068168056271
4	60092070	60182718	2	neutral	AA	42.4928	somatic	0	0.00563306016430855	0.00261395032390277
4	69320540	69365864	1	loss	A	-1	germline	1	6.32665239305581e-05	3.7298936758412e-05
4	70622346	70624864	9	gain	AAAAAAABB	100	somatic	0	0.0832725109454343	0.270050778546622
4	77415910	77526702	2	neutral	AA	54.7239	somatic	0	0.0450051683557004	0.158171580583545
4	81636078	81638596	5	gain	AAABB	13.425	somatic	0	0.0832755859205531	0.270056119033236
4	91010592	91015628	0	loss	-	-1	germline	1	0.0143194672651646	0.0366520960805035
4	93911328	93913846	15	gain	AAAAAAAAABBBBBB	96.2532	somatic	0	0.0832688210967034	0.270044370064446
4	97501996	97504514	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
4	107140900	107156008	1	loss	A	-1	germline	1	7.8013491834888e-05	4.67858017365597e-05
4	117739162	117741680	26	gain	AAAAAAAAAAAAAAABBBBBBBBBBB	50.7073	somatic	0	0.0832669762220056	0.270041165864988
4	128878794	129022320	2	neutral	AA	21.8493	somatic	0	0.71292128577567	0.0985200630443807
4	137168050	137180640	1	loss	A	-1	germline	1	0.000365721114496388	0.000311687184904819
4	147783938	147786456	21	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
4	154290450	154559876	2	neutral	AA	74.8688	somatic	0	0.767360367493909	0.575862311954374
4	162755966	162894456	2	neutral	AA	100	somatic	0	0.08225263318511	0.119417382252213
4	163204170	163249494	2	neutral	AA	36.3786	somatic	0	0.304197436495194	0.158825628819088
4	167107070	167109588	6	gain	AAABBB	18.7054	somatic	0	0.0832743559194681	0.270053982829339
4	167786930	167789448	5	gain	AAABB	61.8958	somatic	0	0.083277430949775	0.270059323362208
4	168154558	168157076	30	gain	AAAAAAAAAAAAAAAABBBBBBBBBBBBBB	100	somatic	0	0.0832669762220056	0.270041165864988
4	172503144	172513216	1	loss	A	-1	germline	1	0.0148522249272346	0.0382598864372915
4	173354228	173389480	2	neutral	AA	100	somatic	0	0.502639546255258	0.646013536482883
4	175635536	175638054	12	gain	AAAAAAAAABBB	100	somatic	0	0.0832712809811409	0.270048642373562
4	184191700	184252132	2	neutral	AA	36.3876	somatic	0	0.482027017626132	0.782077168008165
4	185375160	185415448	2	neutral	AA	62.237	somatic	0	0.249688031630725	0.216640051566758
4	187205746	187223372	2	neutral	AA	100	somatic	0	0.0197188848088975	0.0159158923064646
4	189235254	189240290	3	gain	AAB	6.05994	somatic	0	0.0154982067307402	0.0402365197996839
5	757918	778062	1	loss	A	-1	germline	1	0.0037819660804348	0.00634474795721596
5	3321242	3326278	3	gain	-	-1	germline	1	0.0143286947879113	0.0366760750263592
5	10346462	10348980	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	12806548	12821656	1	loss	A	-1	germline	1	0.005674734865381	0.0116604160295052
5	21141128	21143646	4	gain	-	-1	somatic	0	0.0832823511895889	0.270067868375151
5	21831060	21833578	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
5	25202662	25205180	15	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
5	25482160	25484678	4	gain	-	-1	somatic	0	0.0832823511895889	0.270067868375151
5	26383604	26386122	6	gain	-	-1	somatic	0	0.083274970918171	0.270055050929745
5	28307356	28309874	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	45371842	45376878	0	loss	-	-1	germline	1	0.0143123802043802	0.0366503420621588
5	49599564	49602082	207	gain	-	-1	germline	1	0.0832651313804189	0.270037961693283
5	50644534	50647052	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	58027310	58037382	1	loss	A	-1	germline	1	0.00121717678436212	0.00149750357738543
5	61280566	61283084	75	gain	-	-1	somatic	0	0.0832657463239354	0.270039029747434
5	85856246	85858764	4	gain	-	-1	somatic	0	0.0832835812863359	0.270070004659224
5	92345132	92347650	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
5	100725036	100730072	1	loss	A	-1	somatic	0	0.0233828834748675	0.0649793011280857
5	104748800	104751318	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
5	106070750	106075786	1	loss	A	-1	somatic	0	0.0206237666342739	0.0561722145759237
5	106388018	106390536	24	gain	-	-1	somatic	0	0.0832669762220056	0.270041165864988
5	117024050	117026568	6	gain	-	-1	somatic	0	0.0832737409244443	0.270052914732016
5	118512188	118514706	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	118537368	118544922	0	loss	-	-1	germline	1	0.0155877630215986	0.0405059414913066
5	120722992	120738100	3	gain	-	-1	germline	1	2.26199067136805e-05	1.30877888295799e-05
5	120753208	120755726	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
5	145739322	145741840	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	149647258	149657330	2	neutral	AA	46.899	somatic	0	0.803438180588066	0.987044371090531
5	150888632	150931438	2	neutral	AA	41.2154	somatic	0	0.491237624396228	0.891057868608177
5	151314174	151331800	2	neutral	AA	36.4034	somatic	0	0.947697095772592	0.826115122513739
5	152062020	152097272	2	neutral	AA	100	somatic	0	0.920576531454776	0.601566845457492
5	152097272	152099790	1	loss	A	-1	somatic	0	0.116218204565367	0.323263753080931
5	152696556	152699074	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	153177494	153394042	2	neutral	AA	63.7463	somatic	0	0.0963675655416219	0.107753858794559
5	154559876	154688294	2	neutral	AA	30.4489	somatic	0	0.221240540637263	0.132657046770555
5	155030742	155033260	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
5	156050532	156060604	1	loss	A	-1	germline	1	0.00121242218109549	0.00150898775006969
5	156957012	157045142	2	neutral	AA	100	somatic	0	0.906091718412248	0.711724677823427
5	157100538	157123200	2	neutral	AA	54.8585	somatic	0	0.382980213028958	0.793422941511775
5	161214950	161222504	2	neutral	AA	100	somatic	0	0.267803818271792	0.364212638349147
5	173880490	173903152	2	neutral	AA	100	somatic	0	0.180384652397984	0.530620427319308
5	175157116	175164670	2	neutral	AA	54.6578	somatic	0	0.10965070764931	0.337157844479213
5	176557124	176632664	2	neutral	AA	22.8692	somatic	0	0.285126108197865	0.0836959177021008
5	176798852	176859284	2	neutral	AA	11.8289	somatic	0	0.00193966447140246	0.00591481073920275
5	178266846	178304616	2	neutral	AA	11.9677	somatic	0	0.0399483428565599	0.0993766197229919
5	180951034	181001394	1	loss	A	-1	germline	1	7.93628253761073e-13	1.11022302462516e-15
6	256836	297124	3	gain	-	-1	germline	1	2.04389151963283e-11	2.26152430116144e-13
6	297124	382736	4	gain	-	-1	germline	1	1.15643094997485e-22	0
6	19041116	19048670	1	loss	A	-1	somatic	0	0.00491607761673291	0.00929377327010916
6	32487236	32530042	1	loss	A	-1	germline	1	1.17849599299204e-10	5.30231414330729e-12
6	35657398	35662434	1	loss	A	-1	germline	1	0.0175002947102172	0.0463690529936661
6	49103518	49106036	5	gain	-	-1	somatic	0	0.0832786609876526	0.270061459596942
6	51201012	51203530	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
6	54063978	54071532	1	loss	A	-1	somatic	0	0.00523548867038939	0.00974665627329119
6	54250310	54252828	120	gain	-	-1	somatic	0	0.0832657463239354	0.270039029747434
6	56325142	56327660	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
6	60230560	60238114	4	gain	-	-1	germline	1	0.00270210367770034	0.00496115356519733
6	60238114	60240632	7	gain	-	-1	germline	1	0.0832731259330997	0.270051846637777
6	62212226	62219780	1	loss	A	-1	somatic	0	0.00464621706900069	0.0113762644793848
6	62781294	62783812	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
6	66329156	66334192	1	loss	A	-1	somatic	0	0.016846856923528	0.0443474047384436
6	67233118	67235636	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
6	67432040	67434558	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
6	67802186	67804704	5	gain	-	-1	somatic	0	0.0832768159363552	0.270058255249467
6	73883156	73893228	1	loss	A	-1	germline	1	0.00114219381373873	0.00148304376241926
6	77589652	77592170	5	gain	-	-1	somatic	0	0.0832780459668742	0.270060391478033
6	78256922	78327426	1	loss	A	-1	germline	1	7.66441314977687e-18	0
6	78810882	78818436	1	loss	A	-1	somatic	0	0.00517553963971621	0.00817046459492032
6	93400174	93415282	1	loss	A	-1	somatic	0	0.00174023893973383	0.00608462297628265
6	94704498	94707016	3	gain	-	-1	somatic	0	0.0833032648359689	0.27010418688194
6	95480042	95495150	2	neutral	AA	36.827	somatic	0	0.0777285973135557	0.192424657957252
6	98385814	98388332	5	gain	-	-1	somatic	0	0.0832780459668742	0.270060391478033
6	102590874	102595910	1	loss	A	-1	somatic	0	0.0213617584920381	0.0585144486626772
6	102729364	102779724	2	neutral	AA	100	somatic	0	0.832736628729828	0.181462104168378
6	103817140	103819658	4	gain	AABB	10.8261	somatic	0	0.0832805060720637	0.27006466397217
6	108102776	108120402	2	neutral	AA	28.5281	somatic	0	0.202513683104671	0.0888488136000634
6	113377986	113380504	5	gain	AAABB	25.8103	somatic	0	0.0832755859205531	0.270056119033236
6	113828708	113841298	2	neutral	AA	100	somatic	0	0.529464366976173	0.420462067703089
6	118645642	118648160	5	gain	AAAAA	11.0842	germline	1	0.0832768159363552	0.270058255249467
6	122576240	122679478	2	neutral	AA	31.993	somatic	0	0.276914670405367	0.233138757227986
6	125461868	125474458	2	neutral	AA	100	somatic	0	0.147330590807929	0.642537532720557
6	129624122	129626640	5	gain	AAABB	21.432	somatic	0	0.083277430949775	0.270059323362208
6	129682036	129687072	2	neutral	AA	36.3802	somatic	0	0.283187818776067	0.505287600396976
6	139139644	139174896	2	neutral	AA	100	somatic	0	0.671702781495092	0.266268017292578
6	140710876	140713394	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
6	142002610	142005128	18	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
6	142317360	142319878	5	gain	-	-1	somatic	0	0.0832786609876526	0.270061459596942
6	142526354	142543980	2	neutral	AA	100	somatic	0	0.712582263244976	0.890887902217147
6	148622432	148705526	2	neutral	AA	36.3876	somatic	0	0.0272538800150603	0.0695312270153351
6	157312050	157314568	10	gain	AAAAAABBBB	5.56399	germline	1	0.0832725109454343	0.270050778546622
6	160190124	160220340	2	neutral	AA	3.57568	germline	1	0.398577169846164	0.479493093856983
6	160852358	160920344	2	neutral	AA	63.833	somatic	0	0.0364183619058571	0.14930805343799
6	164591588	164606696	1	loss	A	-1	somatic	0	0.0012351123166499	0.00227046522554775
6	165311736	165319290	1	loss	A	-1	somatic	0	0.00481764986980241	0.00942028285800711
6	165553464	165581162	2	neutral	AA	100	somatic	0	0.430476672944133	0.640980542749592
6	168522186	168549884	2	neutral	AA	43.6834	somatic	0	0.946798896790898	0.647212373462193
6	170022914	170035504	2	neutral	AA	64.6276	somatic	0	0.154836109778025	0.279143915451147
6	170143778	170148814	4	gain	AAAA	13.1968	germline	1	0.0143542191657399	0.0367697827415315
7	903962	906480	4	gain	AAAB	49.284	germline	1	0.0832841963402285	0.270071072805886
7	3293544	3303616	2	neutral	AA	54.5678	somatic	0	0.516877713041054	0.827099280328038
7	9283866	9324154	2	neutral	AA	93.3664	somatic	0	0.154280773319106	0.073021690389467
7	10162648	10165166	4	gain	AABB	66.9718	somatic	0	0.0832786609876526	0.270061459596942
7	13370580	13373098	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
7	20277454	20279972	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
7	35309914	35312432	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
7	39013892	39016410	6	gain	-	-1	somatic	0	0.0832743559194681	0.270053982829339
7	49977264	49982300	1	loss	A	-1	somatic	0	0.0235959784521347	0.065665478062051
7	54393836	54396354	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
7	54396354	54398872	4	gain	AABB	32.5237	somatic	0	0.0832792760121103	0.270062527718934
7	57485940	57498530	3	gain	AAB	1.54361	germline	1	0.000107877140709882	9.11617862876524e-05
7	57878748	57931626	2	neutral	AA	1.84832	somatic	0	6.23547800668257e-11	1.15669762656978e-09
7	57931626	57939180	4	gain	AAAA	2.99926	germline	1	0.00270431574466422	0.00496804347727997
7	57939180	57981986	2	neutral	AA	2.44655	somatic	0	3.19327242933997e-09	3.09725434188834e-09
7	57987022	58062562	3	gain	AAB	2.19672	somatic	0	6.71699645893123e-18	2.22044604925031e-16
7	58062562	58065080	5	gain	AAABB	7.80193	germline	1	0.0832755859205531	0.270056119033236
7	58065080	61046392	3	gain	AAB	-1	somatic	0	7.54822054736892e-18	0
7	61046392	61056464	4	gain	-	-1	germline	1	0.000532328371950272	0.000671192899605266
7	61056464	61111860	3	gain	AAA	19.7025	somatic	0	4.72989134187364e-07	1.29415373983921e-06
7	62297838	62302874	4	gain	-	-1	germline	1	0.0143160689731076	0.0366556043375258
7	62302874	62335608	3	gain	-	-1	somatic	0	0.000114920186454111	0.000102544977960028
7	62335608	62338126	3	gain	AAB	7.73639	germline	1	0.0833383354930875	0.270165081788186
7	62338126	62345680	4	gain	AABB	2.26694	germline	1	0.00270143153712869	0.00496008522626878
7	62345680	62378414	3	gain	AAB	2.85227	somatic	0	0.000290846518593627	0.00304972124204195
7	62401076	62406112	5	gain	-	-1	germline	1	0.0143098567930985	0.036637773746394
7	62438846	62456472	3	gain	AAB	2.48557	germline	1	4.74063321414589e-06	1.84217469711978e-06
7	65485626	65490662	3	gain	AAA	12.8742	somatic	0	0.0144677873852984	0.0371121178987665
7	68406506	68409024	5	gain	AAAAB	100	somatic	0	0.083277430949775	0.270059323362208
7	73588550	73591068	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
7	79624196	79626714	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
7	87142944	87210930	2	neutral	AA	25.6527	somatic	0	0.367428031455164	0.255421703028249
7	94200898	94203416	6	gain	-	-1	somatic	0	0.083274970918171	0.270055050929745
7	99589418	99596972	1	loss	A	-1	somatic	0	0.00339187139840362	0.00655129657837272
7	100949138	100956692	4	gain	AABB	6.26296	germline	1	0.00270390860016215	0.00496649842445562
7	100956692	100959210	16	gain	AAAAAAAAAAAAAAAB	3.11688	germline	1	0.0832688210967034	0.270044370064446
7	100959210	100971800	3	gain	AAB	0.817052	germline	1	0.000107805357315035	9.11363432712919e-05
7	101518206	101538350	2	neutral	AA	100	somatic	0	0.0123144820550415	0.010305027228223
7	109447388	109449906	6	gain	AAABBB	59.0091	somatic	0	0.0832743559194681	0.270053982829339
7	109616094	109618612	4	gain	AABB	36.58	somatic	0	0.083286041523983	0.270074277264374
7	109802426	109815016	1	loss	A	-1	germline	1	0.000329176057089129	0.000262453679936492
7	112796328	112798846	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
7	113816118	114042738	2	neutral	AA	15.6386	somatic	0	0.503887625297176	0.62791357633765
7	114042738	114045256	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
7	114045256	114365042	2	neutral	AA	65.9212	somatic	0	0.620100340299481	0.350469715093145
7	122704658	122707176	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
7	126018346	126068706	2	neutral	AA	100	somatic	0	0.0416572377790398	0.0452492590399164
7	134098608	134113716	1	loss	A	-1	germline	1	9.28048870366966e-05	6.3138998049439e-05
7	143848304	143850822	5	gain	AAAAB	100	germline	1	0.0832780459668742	0.270060391478033
7	152401950	152406986	14	gain	AAAAAAAAABBBBB	100	germline	1	0.0143072367429346	0.0366330981265018
7	152406986	152409504	5	gain	AAABB	6.76256	germline	1	0.083277430949775	0.270059323362208
7	152414540	152424612	2	neutral	AA	4.74649	germline	1	0.0861210126283567	0.231874744026469
7	156816004	156944422	2	neutral	AA	39.0238	germline	1	0.26334244177862	0.403591577316684
7	157594066	157601620	2	neutral	AA	54.5678	somatic	0	0.0843273460340003	0.292300318687146
7	158150544	158153062	5	gain	AAABB	4.76013	germline	1	0.083277430949775	0.270059323362208
7	158593712	158596230	9	gain	AAAAAABBB	27.2508	germline	1	0.0832725109454343	0.270050778546622
8	642090	649644	1	loss	A	-1	germline	1	0.0236854275702916	0.065934097474747
8	649644	702522	2	neutral	AA	8.11759	somatic	0	0.0320648881364558	0.0238239912391236
8	5061180	5066216	2	neutral	AA	54.5678	somatic	0	0.42106368311268	0.606342860934708
8	6111186	6116222	0	loss	-	-1	germline	1	0.0143123802043802	0.0366503420621588
8	6564426	6577016	2	neutral	AA	10.8225	somatic	0	0.855995425685767	0.761659211209716
8	6738168	6909392	2	neutral	AA	21.1353	germline	1	0.324289534338761	0.0988571129427287
8	16341820	16351892	1	loss	A	-1	germline	1	0.00162445889675373	0.00206944289269828
8	16404770	16417360	1	loss	A	-1	germline	1	0.000252389200466662	0.000269235065633699
8	18320968	18323486	3	gain	-	-1	somatic	0	0.0845117275979731	0.272197424663951
8	21355158	21362712	2	neutral	AA	100	somatic	0	0.852585969749045	0.491739413105346
8	21813434	21851204	2	neutral	AA	21.8272	somatic	0	0.678260726907657	0.572228440761572
8	25114532	25134676	1	loss	A	-1	germline	1	4.06392200548842e-06	1.54868881563353e-06
8	28110952	28126060	2	neutral	AA	100	somatic	0	0.0104043122352839	0.0495844180206885
8	28191528	28194046	2	neutral	AA	100	somatic	0	0.752466297651248	0.875946017120719
8	31968528	31986154	2	neutral	AA	100	somatic	0	0.208141681951364	0.680125336063725
8	33318176	33320694	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
8	38361730	38381874	2	neutral	AA	54.5679	somatic	0	0.260374176921141	0.534209928900761
8	39384038	39386556	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
8	40705988	40821816	2	neutral	AA	16.2018	somatic	0	0.452935776591418	0.18304149141516
8	40914982	40922536	1	loss	A	-1	germline	1	0.0210623208881019	0.0575464963598931
8	41886930	42073262	2	neutral	AA	100	somatic	0	0.00355507357459157	0.00492690446079957
8	42332616	42337652	0	loss	-	-1	germline	1	0.0143203412266987	0.0366544348858769
8	42337652	42347724	2	neutral	AA	100	somatic	0	0.154646666695712	0.333142326677678
8	43236578	43241614	1	loss	A	-1	somatic	0	0.0213663781202574	0.0585289223389738
8	43775430	43780466	6	gain	AAAAAA	100	germline	1	0.0143094686108137	0.0366371892653546
8	48980136	49060712	2	neutral	AA	54.5678	somatic	0	0.110233672732969	0.244053842937526
8	49060712	49128698	2	neutral	AA	100	somatic	0	0.21652162709495	0.116526572349717
8	50007480	50052804	2	neutral	AA	27.2893	somatic	0	0.565810932629926	0.945101776931677
8	50501008	50584102	2	neutral	AA	24.4764	somatic	0	0.326404813557717	0.131425421583156
8	63267268	63279858	2	neutral	AA	100	somatic	0	0.902165893409284	0.97962917886274
8	65266560	65274114	2	neutral	AA	100	somatic	0	0.734374210821317	0.899993109055972
8	71302206	71307242	1	loss	A	-1	germline	1	0.0221372173079393	0.0609704370764902
8	73037108	73039626	5	gain	AAABB	26.314	somatic	0	0.0832780459668742	0.270060391478033
8	74449706	74452224	0	loss	-	-1	germline	1	0.0833051103619335	0.270107391627227
8	77340370	77345406	1	loss	A	-1	somatic	0	0.0213999137136963	0.0586360351961392
8	78266994	78277066	1	loss	A	-1	germline	1	0.00105501147596839	0.00181228453042903
8	78687500	78690018	4	gain	-	-1	somatic	0	0.083285426459052	0.270073209108461
8	82550112	82552630	6	gain	AAAAAB	100	somatic	0	0.0832737409244443	0.270052914732016
8	86160924	86163442	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
8	87724602	87754818	2	neutral	AA	54.5678	somatic	0	0.526419310202944	0.5926198587949
8	90018500	90177134	2	neutral	AA	100	somatic	0	0.00321290033346104	0.0161743411998688
8	92246930	92251966	2	neutral	AA	100	somatic	0	0.121939206411518	0.241433782008428
8	93503412	93513484	2	neutral	AA	100	somatic	0	0.0225810732834755	0.0355321508758069
8	95381840	95384358	2	neutral	AA	100	somatic	0	0.171195139311486	0.399653104526867
8	97350916	97353434	2	neutral	AA	100	somatic	0	0.317894728239371	0.5632589757298
8	97499478	97501996	2	neutral	AA	100	somatic	0	0.566794482908767	0.767911358743954
8	98184374	98244806	2	neutral	AA	24.7363	somatic	0	0.526172337349493	0.373117556222045
8	102774688	102784760	2	neutral	AA	100	somatic	0	0.420453506670195	0.384272300520343
8	103764262	103827212	2	neutral	AA	100	somatic	0	0.261650742541955	0.354097874819404
8	104547360	104549878	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
8	105876864	105879382	12	gain	AAAAAABBBBBB	100	somatic	0	0.0832712809811409	0.270048642373562
8	118670822	118703556	2	neutral	AA	55.0709	somatic	0	0.813486210596476	0.973845883613049
8	120919396	120921914	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
8	122039906	122241346	2	neutral	AA	17.2024	somatic	0	0.591337933341059	0.890939695942019
8	127780946	127788500	2	neutral	AA	54.5678	somatic	0	0.797535608846362	0.632811706810575
8	129004694	129009730	2	neutral	AA	54.9119	somatic	0	0.913116542722558	0.991528936928681
8	134360480	134365516	2	neutral	AA	54.6198	somatic	0	0.375394641118968	0.841176030500924
8	137361936	137374526	2	neutral	AA	36.3786	germline	1	0.334478270518872	0.397602990694038
8	138066976	138072012	2	neutral	AA	54.5777	somatic	0	0.849782194255181	0.668897210667796
8	142136064	142166280	2	neutral	AA	40.9846	somatic	0	0.00557932195350679	0.0238423540265814
8	142518800	142523836	2	neutral	AA	23.7537	somatic	0	0.177881109549557	0.232754530738584
8	142700096	142710168	2	neutral	AA	54.5678	somatic	0	0.940841885467196	0.994566042503002
8	143883556	143893628	2	neutral	AA	54.5678	somatic	0	0.21555473530934	0.662760698899983
8	144125284	144127802	6	gain	AAAABB	87.836	germline	1	0.0832731259330997	0.270051846637777
8	144127802	144160536	2	neutral	AA	54.5678	somatic	0	0.387799548807119	0.774351949716619
8	144231040	144248666	2	neutral	AA	23.7087	germline	1	0.00315678113379597	0.00882511340719627
9	3502538	3505056	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
9	23092578	23095096	0	loss	-	-1	somatic	0	0.0833081863121398	0.27011273293103
9	23362004	23377112	1	loss	A	-1	germline	1	6.96981635357742e-05	4.09766355868868e-05
9	28189010	28191528	4	gain	-	-1	germline	1	0.0832995738833963	0.270097777474649
9	31427158	31429676	3	gain	-	-1	somatic	0	0.0833383354930875	0.270165081788186
9	31429676	31432194	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
9	33713502	33716020	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
9	40912464	40930090	6	gain	-	-1	somatic	0	0.000532232687206538	0.000671160777059532
9	71395372	71516236	2	neutral	AA	21.4126	somatic	0	0.0229331397136571	0.136849540120911
9	77594688	77624904	2	neutral	AA	100	somatic	0	0.999246592458255	0.843087284057894
9	81311256	81328882	2	neutral	AA	36.3786	somatic	0	0.243082683797971	0.247897146824008
9	86991864	87012008	2	neutral	AA	100	somatic	0	0.362437007091225	0.298073988355362
9	91159154	91206996	2	neutral	AA	27.284	somatic	0	0.292995875336386	0.463973979062205
9	98546966	98549484	0	loss	-	-1	germline	1	0.0833063407309761	0.270109528139497
9	98698046	98740852	2	neutral	AA	41.8085	somatic	0	0.462406063490405	0.409308674764739
9	102920732	102923250	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
9	103011380	103013898	4	gain	AABB	15.6497	somatic	0	0.0832798910402473	0.27006359584401
9	103013898	103016416	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
9	110688762	110691280	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
9	110965742	111006030	2	neutral	AA	54.5679	somatic	0	0.84166871294412	0.944163362154864
9	124424452	124462222	2	neutral	AA	30.0635	somatic	0	0.0281800833550715	0.012481941032941
9	127569434	127650010	2	neutral	AA	100	somatic	0	0.156477060253347	0.277598757707826
9	128611886	128624476	2	neutral	AA	100	somatic	0	0.270713749356899	0.253074185619106
9	129425200	129437790	3	gain	AAB	0.27192	germline	1	0.000109917314634462	9.47138780018619e-05
10	2583468	2585986	4	gain	AAAB	100	somatic	0	0.0832921923756658	0.270084958993111
10	8269112	8271630	12	gain	AAAAAAABBBBB	100	somatic	0	0.083270051031564	0.270046506212836
10	17736792	18001182	2	neutral	AA	42.2927	somatic	0	0.51148721454999	0.219598123984305
10	19237520	19240038	2670	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB	100	somatic	0	0.0832651313804189	0.270037961693283
10	19313060	19315578	5	gain	AAABB	12.9409	somatic	0	0.0832780459668742	0.270060391478033
10	26569936	26587562	2	neutral	AA	0.79481	somatic	0	0.354106386054802	0.646070398373302
10	26622814	26653030	2	neutral	AA	0.533409	somatic	0	0.076198597818905	0.266395185421814
10	26924974	26952672	2	neutral	AA	26.3967	somatic	0	0.381953344392444	0.583447759179412
10	30686866	30739744	2	neutral	AA	42.3214	somatic	0	0.382011808663872	0.312438768762552
10	32084356	32117090	2	neutral	AA	36.7967	somatic	0	0.196315544003934	0.38471710785863
10	34672860	34768544	2	neutral	AA	13.4238	somatic	0	0.912799863389954	0.415799519474952
10	38485112	38490148	4	gain	AAAA	9.55535	germline	1	0.0143120890215097	0.0366436190055027
10	38490148	38525400	3	gain	AAB	0.759216	somatic	0	9.64161160404155e-11	1.56774593307318e-12
10	38575760	38578278	3	gain	AAB	21.5886	germline	1	0.0837082262982048	0.270806688700387
10	38578278	38580796	6	gain	AAAAAA	6.57575	germline	1	0.083274970918171	0.270055050929745
10	38580796	38583314	4	gain	AAAA	3.53147	germline	1	0.0832805060720637	0.27006466397217
10	38583314	38835114	3	gain	AAB	0.329056	somatic	0	3.83274043768169e-17	0
10	39258138	39268210	1	loss	A	-1	germline	1	0.00145624660609841	0.0015754691494807
10	39341232	39361376	1	loss	A	-1	germline	1	0.00013666290990332	0.000158039634103324
10	39545190	39550226	5	gain	-	-1	germline	1	0.0143102449846725	0.0366380659899729
10	41826498	41841606	3	gain	AAA	28.1657	somatic	0	3.10326343155426e-05	3.61983061737403e-05
10	41856714	41914628	42	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBB	9.17126	germline	1	4.59393807638814e-06	1.66349858732318e-06
10	42299882	42322544	3	gain	AAA	13.709	germline	1	2.20013860511078e-07	3.86160832199778e-08
10	46515014	46560338	3	gain	AAB	0.599217	germline	1	4.36374520193658e-12	2.73114864057789e-14
10	52832676	52835194	38	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBB	100	somatic	0	0.0832669762220056	0.270041165864988
10	56937016	56982340	2	neutral	AA	32.3496	somatic	0	0.629268693050826	0.688248620113243
10	60225524	60228042	5	gain	AAABB	37.1717	somatic	0	0.0832755859205531	0.270056119033236
10	65269078	65332028	2	neutral	AA	54.568	somatic	0	0.000267524823009006	0.000585182895315173
10	65546058	65556130	1	loss	A	-1	germline	1	0.00130438497912523	0.00183659704488615
10	67726646	67729164	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
10	76494322	76501876	1	loss	A	-1	germline	1	0.0143545597615332	0.0367100199031539
10	76753676	76796482	2	neutral	AA	27.2891	somatic	0	0.745988182193104	0.939723006229863
10	96759186	96812064	2	neutral	AA	100	somatic	0	0.179413199202013	0.0749069042807351
10	96814582	96817100	6	gain	-	-1	somatic	0	0.0832737409244443	0.270052914732016
10	97157030	97182210	2	neutral	AA	13.6797	somatic	0	0.447364276641315	0.734852796176428
10	98337972	98343008	2	neutral	AA	100	somatic	0	0.955013405636697	0.881988198501116
10	101442666	101533314	2	neutral	AA	21.8344	somatic	0	0.431650898761404	0.450402625534175
10	103250590	103253108	4	gain	AABB	14.2026	somatic	0	0.0832811211075594	0.270065732103413
10	113984824	114012522	2	neutral	AA	35.0767	somatic	0	0.832222561478951	0.800360192013207
10	125315824	125353594	2	neutral	AA	100	somatic	0	0.12975330513258	0.064025157808422
10	128463324	128465842	18	gain	AAAAAAAAABBBBBBBBB	43.8892	germline	1	0.0832688210967034	0.270044370064446
10	131109742	131114778	0	loss	-	-1	germline	1	0.0147694451941128	0.0380095907973053
10	132247878	132283130	2	neutral	AA	13.4443	somatic	0	0.0601035005504647	0.203360604158735
10	132363706	132366224	5	gain	AAABB	10.5611	germline	1	0.0832755859205531	0.270056119033236
10	133109034	133114070	3	gain	AAB	2.78608	somatic	0	0.0143183991538505	0.0366553119715527
10	133255078	133267668	2	neutral	AA	17.7484	somatic	0	0.248421969678424	0.632053544642273
11	196404	256836	2	neutral	AA	29.6805	somatic	0	0.00662727770570825	0.0123520270482393
11	720148	765472	2	neutral	AA	27.4008	somatic	0	0.13026375633613	0.124624323574276
11	4947870	4952906	1	loss	A	-1	somatic	0	0.0206512632995616	0.0558604718376146
11	9603652	9669120	2	neutral	AA	18.1893	somatic	0	0.39740057163651	0.387936423708097
11	12328128	12333164	2	neutral	AA	22.0175	somatic	0	0.0817027744719989	0.116560324570417
11	14158714	14161232	23	gain	-	-1	somatic	0	0.0832682061347918	0.270043301994876
11	16281388	16283906	0	loss	-	-1	somatic	0	0.0833094167179822	0.270114869474138
11	18376364	18436796	2	neutral	AA	21.6582	somatic	0	0.0888723915731694	0.0234279208748505
11	19340758	19358384	2	neutral	AA	54.5678	somatic	0	0.415737002148654	0.593107389757851
11	20453714	20486448	2	neutral	AA	40.478	somatic	0	0.713047977395539	0.932745170474281
11	22636820	22639338	6	gain	AAABBB	100	somatic	0	0.083274970918171	0.270055050929745
11	24814890	24819926	2	neutral	AA	100	germline	1	0.372791318413447	0.349401773411139
11	26056264	26058782	31	gain	-	-1	somatic	0	0.0832669762220056	0.270041165864988
11	27695482	27755914	2	neutral	AA	54.5841	somatic	0	0.239162340364144	0.495193945506732
11	28984698	28992252	1	loss	A	-1	germline	1	0.0143544137910346	0.0367498523451601
11	36309560	36312078	4	gain	AAAA	54.1242	germline	1	0.0832995738833963	0.270097777474649
11	37742302	37744820	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
11	45306374	45334072	2	neutral	AA	100	somatic	0	0.81622891783869	0.972521028427222
11	47499552	47504588	2	neutral	AA	100	somatic	0	0.929521540495207	0.995371047533426
11	47617898	47930130	2	neutral	AA	7.53166	somatic	0	0.180786718890289	0.0806048281233213
11	48297758	48635170	2	neutral	AA	26.1638	somatic	0	0.210199065177833	0.170786373576562
11	48806394	48942366	2	neutral	AA	1.86576	somatic	0	1.16197974638087e-11	1.62025948213795e-12
11	50176186	50178704	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
11	54542398	54549952	3	gain	AAB	3.07442	somatic	0	0.0143305409217496	0.0366801703641489
11	54756428	54779090	1	loss	A	-1	germline	1	8.36781999302149e-06	1.9165205967786e-06
11	55599958	55685570	1	loss	A	-1	germline	1	3.60722890211899e-20	0
11	58646738	58654292	2	neutral	AA	100	somatic	0	0.940282602325018	0.999632582437497
11	62579854	62683092	2	neutral	AA	15.656	somatic	0	0.597845340062188	0.130555368978345
11	64480944	64755406	2	neutral	AA	37.2309	somatic	0	0.331815226115925	0.0921594956292503
11	64898932	64921594	2	neutral	AA	54.5686	somatic	0	0.484150763295253	0.834238722407674
11	65994262	66168004	2	neutral	AA	93.0935	somatic	0	0.0983326915675133	0.00139247370133011
11	70370546	70373064	3	gain	AAB	22.8213	somatic	0	0.0833051103619335	0.270107391627217
11	73666608	73701860	2	neutral	AA	100	somatic	0	0.561613894205649	0.181054929590313
11	75101868	75134602	2	neutral	AA	31.2753	somatic	0	0.668896523241808	0.957079203611842
11	76668064	76715906	2	neutral	AA	24.8174	somatic	0	0.00483577908266049	0.022631525751582
11	78551528	78569154	2	neutral	AA	100	somatic	0	0.347132205733821	0.697843517439982
11	82144714	82152268	1	loss	A	-1	germline	1	0.00390765022302492	0.00727868076852412
11	83786450	83844364	2	neutral	AA	30.1305	somatic	0	0.452252046522537	0.355065310160429
11	93767802	93777874	2	neutral	AA	100	somatic	0	0.132739426075502	0.218056585882758
11	96565300	96567818	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
11	100009924	100042658	2	neutral	AA	36.3786	somatic	0	0.310047529222832	0.211344994580108
11	104119300	104121818	5	gain	AAABB	26.039	somatic	0	0.083277430949775	0.270059323362208
11	104396280	104403834	1	loss	A	-1	germline	1	0.0198984461730134	0.0538620243859415
11	105161752	105307796	2	neutral	AA	100	somatic	0	0.947280656417885	0.83626068335607
11	106707804	106710322	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
11	112725824	112740932	2	neutral	AA	100	somatic	0	0.276682993722835	0.209216300313189
11	113994896	114025112	2	neutral	AA	100	germline	1	0.065310354207726	0.0689377148738515
11	114601734	114604252	5	gain	AAABB	54.4728	somatic	0	0.0832755859205531	0.270056119033236
11	114639504	114642022	5	gain	AAABB	21.2141	somatic	0	0.083277430949775	0.270059323362208
11	115830518	115895986	2	neutral	AA	9.5663	somatic	0	0.663782691315939	0.682358167877289
11	120793496	120798532	2	neutral	AA	100	somatic	0	0.997183076629226	0.747203814906162
11	122158252	122218684	2	neutral	AA	36.3786	somatic	0	0.0196162440013655	0.0381725291728169
11	127466196	127516556	2	neutral	AA	59.9711	somatic	0	0.0523371517326048	0.0372736460728683
11	130618732	130643912	2	neutral	AA	13.642	somatic	0	0.785138791888543	0.928272055193948
11	133177020	133197164	2	neutral	AA	100	somatic	0	0.14359267248919	0.112152058161763
12	757918	765472	1	loss	A	-1	germline	1	0.00547873326511518	0.00894312769180927
12	2253610	2256128	6	gain	-	-1	germline	1	0.0832743559194681	0.270053982829339
12	9482788	9510486	1	loss	A	-1	germline	1	0.00163762089232138	0.00148403215533155
12	20723140	20725658	4	gain	-	-1	somatic	0	0.0832909621758928	0.270082822622694
12	28649804	28652322	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
12	37276472	37286544	3	gain	-	-1	somatic	0	0.000533015722405047	0.000672028591876761
12	37613884	37616402	3	gain	AAB	23.9982	somatic	0	0.0851146836460857	0.273235535874809
12	37616402	37623956	1	loss	A	-1	germline	1	0.00680446970138797	0.0097252557885209
12	39711378	39713896	0	loss	-	-1	somatic	0	0.0833094167179822	0.270114869474138
12	40194834	40252748	2	neutral	AA	100	germline	1	0.309289246930652	0.246538280243612
12	40502030	40517138	2	neutral	AA	1.35061	somatic	0	0.00523488656254273	0.0261129916420277
12	42083334	42111032	2	neutral	AA	0.655951	germline	1	0.244210780324718	0.0688474561622621
12	42445926	42458516	2	neutral	AA	100	germline	1	0.911531362377458	0.702014769644393
12	44150612	44153130	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	45296302	45324000	2	neutral	AA	100	germline	1	0.00234974787113434	0.00679535426623812
12	45510332	45515368	1	loss	A	-1	somatic	0	0.0177061515800665	0.0464868693924911
12	49788414	49881580	2	neutral	AA	9.66231	somatic	0	0.667446846466872	0.458046174017851
12	50352446	50380144	2	neutral	AA	9.92447	somatic	0	0.214785867110854	0.237116214853792
12	54023690	54026208	2	neutral	AA	100	somatic	0	0.370226040173226	0.61265006718467
12	59533074	59540628	2	neutral	AA	1.92148	germline	1	0.238695803116883	0.43533582991254
12	59540628	59553218	1	loss	A	-1	germline	1	0.000322708249000908	0.000257515120181906
12	60741714	60744232	31	gain	-	-1	somatic	0	0.0832669762220056	0.270041165864988
12	63106116	63123742	2	neutral	AA	100	somatic	0	0.470306058825881	0.506652400733962
12	64747852	64775550	2	neutral	AA	100	somatic	0	0.716088893185539	0.608253963574302
12	69227374	69229892	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	70103638	70342848	2	neutral	AA	34.9999	somatic	0	0.169759962658714	0.104956722214593
12	74613376	74615894	4	gain	AABB	22.2159	somatic	0	0.0832792760121103	0.270062527718934
12	76121658	76124176	5	gain	-	-1	somatic	0	0.0832780459668742	0.270060391478033
12	76673100	76675618	4	gain	-	-1	somatic	0	0.0832786609876526	0.270061459596942
12	77179218	77222024	2	neutral	AA	54.6149	somatic	0	0.74787551293324	0.840433604481597
12	82638242	82640760	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
12	85878908	85881426	10	gain	-	-1	somatic	0	0.083271895961448	0.27004971045855
12	87898344	87946186	2	neutral	AA	58.0999	germline	1	0.306181769332655	0.0672263695397721
12	88701586	88704104	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	90091522	90094040	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	92997294	93019956	2	neutral	AA	36.5722	somatic	0	0.653008218883827	0.223214668319738
12	94492986	94525720	2	neutral	AA	37.9905	somatic	0	0.389535662082262	0.467395971480718
12	95147666	95150184	12	gain	AAAAAABBBBBB	100	somatic	0	0.0832712809811409	0.270048642373562
12	95757022	95762058	2	neutral	AA	100	somatic	0	0.141131064400925	0.377526563388632
12	96824654	96827172	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	97970344	97972862	4	gain	AABB	66.8935	somatic	0	0.0832792760121103	0.270062527718934
12	98003078	98018186	3	gain	AAB	10.3273	germline	1	2.36942317481714e-05	1.48716587275999e-05
12	105159234	105191968	2	neutral	AA	54.8373	somatic	0	0.232615230996992	0.327563900692716
12	106236938	106239456	1	loss	A	-1	somatic	0	0.130195537902712	0.343893747344073
12	109633720	109641274	2	neutral	AA	5.5823	somatic	0	0.694701069971893	0.892937419417626
12	110817180	110832288	2	neutral	AA	87.6983	somatic	0	0.904240306393725	0.679969434246647
12	117202828	117207864	1	loss	A	-1	germline	1	0.0238984791073307	0.0666210202893092
12	119781260	119831620	2	neutral	AA	100	somatic	0	0.284905047963858	0.442501744144638
12	120292414	120362918	2	neutral	AA	100	somatic	0	0.226263631095659	0.334195149952794
12	120926950	120929468	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	121808250	121823358	2	neutral	AA	54.5678	somatic	0	0.358096137397096	0.643047128364974
12	124195314	124374092	2	neutral	AA	24.1067	somatic	0	0.0182514487528774	0.0107955930630893
12	128083106	128085624	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
12	128886348	128896420	2	neutral	AA	54.5678	somatic	0	0.626764979671757	0.67028489968978
12	129762612	129782756	2	neutral	AA	100	somatic	0	0.515856098808301	0.459936600684134
12	130102542	130110096	2	neutral	AA	100	germline	1	0.797879739627527	0.992189541181681
12	130643912	130646430	4	gain	AAAB	6.78109	somatic	0	0.0832909621758928	0.270082822622694
12	131364060	131479888	2	neutral	AA	3.71142	germline	1	0.00200359050785349	0.0381291346821395
12	132386368	132401476	2	neutral	AA	12.6831	somatic	0	0.0313726923932808	0.152018539352581
13	22019910	22024946	0	loss	-	-1	germline	1	0.0143123802043802	0.0366503420621588
13	34740846	34745882	3	gain	-	-1	somatic	0	0.0196927122114201	0.0532229094163069
13	38482594	38487630	1	loss	A	-1	germline	1	0.0200644341155232	0.0543873727867847
13	38986194	38988712	5	gain	-	-1	somatic	0	0.0832780459668742	0.270060391478033
13	45422202	45424720	9	gain	-	-1	somatic	0	0.0832725109454343	0.270050778546622
13	50495972	50501008	1	loss	A	-1	germline	1	0.017642761126876	0.04399961271759
13	55970104	55997802	1	loss	A	-1	somatic	0	1.74306126873643e-06	7.26353417412895e-07
13	57795654	57798172	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
13	58893502	58896020	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
13	61960426	61962944	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
13	62061146	62063664	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
13	62688128	62690646	4	gain	-	-1	somatic	0	0.0832805060720637	0.27006466397217
13	63028058	63043166	3	gain	-	-1	germline	1	0.000143966559200011	0.000215757571337072
13	63063310	63068346	4	gain	-	-1	germline	1	0.0143152923205322	0.0366529731172148
13	63390650	63400722	1	loss	A	-1	somatic	0	0.00172123720581125	0.00165098223308957
13	66444984	66447502	3	gain	-	-1	somatic	0	0.0833044951829321	0.270106323375708
13	68303268	68310822	1	loss	A	-1	somatic	0	0.00686591320004606	0.0107041668730201
13	69262626	69270180	1	loss	A	-1	somatic	0	0.00610751548178171	0.0115794083056522
13	71901490	71906526	1	loss	A	-1	somatic	0	0.0201424432075545	0.048262469330287
13	74809780	74812298	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
13	76318062	76320580	7	gain	-	-1	somatic	0	0.0832731259330997	0.270051846637777
13	79372396	79374914	6	gain	-	-1	somatic	0	0.083274970918171	0.270055050929745
13	82169894	82174930	3	gain	-	-1	somatic	0	0.0143578687773661	0.0367360824482704
13	82545076	82547594	3	gain	-	-1	somatic	0	0.0833223368680775	0.270137303921502
13	82587882	82600472	1	loss	A	-1	germline	1	0.0003171227740971	0.000286994655378514
13	84705520	84708038	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
13	85999772	86002290	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
13	88890436	88892954	1	loss	A	-1	somatic	0	0.118663737760733	0.326943986097195
13	97542284	97572500	2	neutral	AA	100	somatic	0	0.414913649355205	0.58441521315521
13	99151286	99163876	2	neutral	AA	100	somatic	0	0.491756207791886	0.65264015072006
13	102046986	102084756	2	neutral	AA	54.0873	somatic	0	0.223352436575514	0.488026395498827
13	104504554	104507072	2	neutral	AA	100	germline	1	0.660792678437591	0.827150227652211
13	105839094	105866792	2	neutral	AA	54.5922	somatic	0	0.817812538033277	0.836517957083908
13	106813560	106818596	2	neutral	AA	100	somatic	0	0.256351055869692	0.592033966250698
13	107468240	107490902	2	neutral	AA	100	somatic	0	0.990189524820058	0.919594346375448
13	109021846	109024364	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
13	109215732	109218250	55	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBB	100	somatic	0	0.0832669762220056	0.270041165864988
13	111021138	111036246	2	neutral	AA	100	somatic	0	0.156609167444332	0.128646973026792
13	113327626	113350288	2	neutral	AA	26.1166	somatic	0	0.202230591381802	0.446102108176002
13	113518994	113526548	2	neutral	AA	36.3786	somatic	0	0.606692391247745	0.795457953291595
13	113604606	113612160	2	neutral	AA	54.5678	somatic	0	0.117158016959266	0.334570983923809
14	0	16092538	3	gain	AAB	-1	somatic	0	NA	NA
14	16092538	16095056	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
14	16095056	18658380	3	gain	AAB	-1	somatic	0	NA	NA
14	18658380	18660898	4	gain	AAAB	19.3701	germline	1	0.0832878867408527	0.270077481750616
14	18660898	18681042	3	gain	AAB	-1	somatic	0	NA	NA
14	18693632	19733566	3	gain	AAB	-1	somatic	0	NA	NA
14	19733566	19955150	3	gain	AAB	0.613296	somatic	0	7.96185438436208e-27	0
14	20237166	20239684	5	gain	AAABB	30.6953	somatic	0	0.083277430949775	0.270059323362208
14	22702288	22742576	2	neutral	AA	54.5678	somatic	0	0.603858357682803	0.505720264971666
14	24444744	24510212	2	neutral	AA	11.9035	somatic	0	0.313375900356093	0.356798449935133
14	25288274	25333598	2	neutral	AA	36.3786	germline	1	0.158627017467567	0.162462467820802
14	28662394	28664912	4	gain	AABB	100	somatic	0	0.0833014193431234	0.270100982164418
14	34348038	34350556	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
14	35136172	35146244	1	loss	A	-1	germline	1	0.00145424560171877	0.0016409614664874
14	37039780	37100212	2	neutral	AA	100	somatic	0	0.0638126535604358	0.0110451995493508
14	37772518	37858130	2	neutral	AA	54.8585	germline	1	0.409348442456573	0.389466963122166
14	40144474	40149510	1	loss	A	-1	somatic	0	0.023992429849205	0.0538236469768032
14	41345560	41348078	4	gain	AABB	28.5173	somatic	0	0.0832878867408527	0.270077481750616
14	42445926	42450962	1	loss	A	-1	somatic	0	0.021880230023838	0.060142589667799
14	43762840	43765358	1	loss	A	-1	somatic	0	0.0834953769956494	0.270437629050416
14	45417166	45422202	2	neutral	AA	18.1893	somatic	0	0.167467281754989	0.410399498328868
14	52527998	52530516	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
14	54789162	55307870	2	neutral	AA	39.0296	somatic	0	0.886535374964417	0.14156895304097
14	56836296	57234140	2	neutral	AA	100	somatic	0	0.125882812270917	0.147844596119751
14	60432000	60434518	21	gain	-	-1	somatic	0	0.0832682061347918	0.270043301994876
14	65402532	65425194	2	neutral	AA	100	somatic	0	0.459935181353051	0.422892405008663
14	67759380	67774488	2	neutral	AA	100	somatic	0	0.875876666593379	0.927616956637514
14	73545744	73555816	1	loss	A	-1	germline	1	0.0168009212980204	0.0419313121059872
14	79639304	79649376	1	loss	A	-1	germline	1	0.00224630308489318	0.00242644599050768
14	82907668	82915222	3	gain	AAB	25.3563	somatic	0	0.00297267554374268	0.00565753414547387
14	86442940	86445458	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
14	97786530	97789048	4	gain	-	-1	somatic	0	0.0832909621758928	0.270082822622694
14	99926830	99929348	13	gain	AAAAAAAABBBBB	36.2418	germline	1	0.083270051031564	0.270046506212836
14	100364962	100385106	2	neutral	AA	100	somatic	0	0.936563491287151	0.946001236630563
14	102598428	102626126	2	neutral	AA	54.5678	somatic	0	0.40785222978995	0.605835075973881
14	103074330	103084402	2	neutral	AA	42.8252	somatic	0	0.591872186630699	0.819951548915207
15	0	17079594	3	gain	AAB	-1	somatic	0	NA	NA
15	17079594	17082112	15	gain	-	-1	germline	1	0.0832688210967034	0.270044370064446
15	17082112	19809106	3	gain	AAB	-1	somatic	0	0.0856333239448707	0.274127480684163
15	19809106	19811624	2	neutral	AA	56.1003	somatic	0	0.0906181839126577	0.282586720720657
15	19811624	19982848	3	gain	AAB	-1	somatic	0	NA	NA
15	19992920	20272418	3	gain	AAB	-1	somatic	0	NA	NA
15	20272418	20274936	3	gain	AAB	8.9226	somatic	0	0.0833746492950351	0.270228123910851
15	20274936	20340404	3	gain	AAB	-1	somatic	0	NA	NA
15	20340404	20342922	7	gain	AAAAABB	7.69625	germline	1	0.0832731259330997	0.270051846637777
15	20342922	20390764	3	gain	AAB	2.12937	germline	1	4.6249658415837e-06	1.67683246654615e-06
15	20390764	20672780	3	gain	AAB	0.710939	germline	1	4.57740975133507e-05	3.01341601816052e-05
15	25527484	25530002	3	gain	AAB	7.58402	somatic	0	0.0833223368680775	0.270137303921502
15	25794392	25827126	2	neutral	AA	100	somatic	0	0.855079491658862	0.845510552574771
15	27307710	27310228	137	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB	81.6094	somatic	0	0.0832651313804189	0.270037961693283
15	38608494	38646264	2	neutral	AA	18.5525	somatic	0	0.448755821957742	0.386453615983119
15	45875442	45880478	3	gain	-	-1	somatic	0	0.0145554283396923	0.0370197116564899
15	49252080	49257116	1	loss	A	-1	germline	1	0.0207977117460236	0.0567015127000412
15	49957120	49959638	1	loss	A	-1	somatic	0	0.0846649464582624	0.27246071421211
15	50918996	50926550	1	loss	A	-1	somatic	0	0.0141488680472666	0.0247340168662679
15	54552470	54554988	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
15	54761464	54766500	3	gain	AAB	16.8849	somatic	0	0.0149679955138405	0.0385589624693052
15	57231622	57292054	2	neutral	AA	21.8285	somatic	0	0.328633881066009	0.199780253359911
15	59334152	59369404	2	neutral	AA	35.5295	somatic	0	0.641681730934768	0.812665587828599
15	68250390	68268016	2	neutral	AA	100	germline	1	0.0883841628807297	0.209784192984751
15	69355792	69383490	2	neutral	AA	36.3786	somatic	0	0.307979982936986	0.201486267470062
15	71415516	71423070	1	loss	A	-1	germline	1	0.0232149314093175	0.0641662560955981
15	76592524	76602596	1	loss	A	-1	germline	1	0.00115650697375049	0.00160658632643129
15	77038210	77040728	0	loss	-	-1	germline	1	0.0833143384885544	0.270123415769922
15	77715552	77720588	1	loss	A	-1	somatic	0	0.0244167044652009	0.0529132505477027
15	79440382	79447936	1	loss	A	-1	somatic	0	0.00926399314962121	0.0124391023796443
15	80004414	80006932	3	gain	AAB	26.6066	somatic	0	0.0833106471385448	0.270117006029572
15	89205186	89275690	2	neutral	AA	54.5681	somatic	0	0.082525754225769	0.196984104046639
15	94039746	94052336	2	neutral	AA	6.08805	germline	1	0.261876004472779	0.148149451379103
15	97554874	97557392	1	loss	A	-1	somatic	0	0.0834966096402973	0.27043976746864
15	97640486	97643004	5	gain	AAABB	84.1488	somatic	0	0.0832755859205531	0.270056119033236
15	101820366	101858136	3	gain	AAB	10.0832	germline	1	1.9944456308317e-11	1.94289029309402e-13
16	846048	848566	5	gain	AAABB	15.1805	germline	1	0.0832786609876526	0.270061459596942
16	1009718	1024826	2	neutral	AA	54.5678	somatic	0	0.444276377822518	0.444116386142366
16	1024826	1027344	6	gain	AAAABB	8.24529	germline	1	0.0832731259330997	0.270051846637777
16	1027344	1055042	2	neutral	AA	21.8272	germline	1	0.960895819266794	0.82089743670511
16	6778456	6780974	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
16	19935006	19955150	1	loss	A	-1	germline	1	2.66820824342046e-06	1.19517783825351e-06
16	20567024	20569542	9	gain	AAAAABBBB	100	somatic	0	0.0832725109454343	0.270050778546622
16	21559116	21581778	4	gain	AABB	3.44143	germline	1	2.03790732755687e-07	3.05108430742607e-08
16	22614158	22699770	4	gain	AABB	1.48638	germline	1	2.5458652138066e-23	0
16	25099424	25106978	2	neutral	AA	100	germline	1	0.820963054882522	0.944604342653725
16	25328562	25331080	0	loss	-	-1	germline	1	0.0833057255446149	0.27010845988182
16	27209508	27320300	2	neutral	AA	41.2053	somatic	0	0.568153299465345	0.286962173005159
16	34060986	34066022	20	gain	AAAAAAAAAAAAABBBBBBB	4.83566	germline	1	0.0143070426819797	0.0366333903374494
16	34068540	34083648	3	gain	AAA	6.41974	somatic	0	0.000687687386034939	0.000931245341121434
16	34083648	34086166	21	gain	AAAAAAAAAAAAAABBBBBBB	100	germline	1	0.0832688210967034	0.270044370064446
16	34086166	34096238	3	gain	AAA	56.8486	somatic	0	0.000976222434358359	0.00260526475336287
16	34096238	34098756	14	gain	AAAAAAAAABBBBB	4.92248	germline	1	0.0832688210967034	0.270044370064446
16	34098756	34101274	4	gain	AAAB	50.6732	germline	1	0.0832792760121103	0.270062527718934
16	34101274	34161706	2	neutral	AA	4.12128	germline	1	0.0129339016694506	0.0259794396436294
16	34161706	34164224	4	gain	AABB	0.600795	somatic	0	0.0832995738833963	0.270097777474649
16	34174296	34176814	6	gain	AAAABB	4.01094	somatic	0	0.0832737409244443	0.270052914732016
16	34191922	34214584	3	gain	AAB	0.882645	germline	1	3.19206044948756e-05	3.77797308503958e-05
16	34219620	34959912	3	gain	AAA	1.40603	somatic	0	1.00132354698567e-41	0
16	35231856	35523944	3	gain	AAB	3.0731	somatic	0	1.06620492999155e-69	0
16	35649844	35682578	3	gain	AAB	16.0946	somatic	0	1.01064066640784e-08	6.71423405762539e-09
16	35755600	35785816	3	gain	AAA	15.0133	somatic	0	7.24909621914759e-09	4.76908079694027e-09
16	35977184	35979702	3	gain	-	-1	somatic	0	0.0835490106627385	0.270530661647792
16	35979702	36090494	2	neutral	AA	4.07966	somatic	0	2.55422182547594e-18	1.11022302462516e-16
16	36123228	36125746	7	gain	-	-1	germline	1	0.0832731259330997	0.270051846637777
16	56730540	56743130	2	neutral	AA	54.5715	germline	1	0.248720702852619	0.346822144891553
16	64239216	64244252	2	neutral	AA	100	somatic	0	0.276040702048494	0.434130023993788
16	65128070	65130588	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
16	65321956	65324474	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
16	70151480	70161552	4	gain	AAAB	3.84251	germline	1	0.000532417236422003	0.000671342823877707
16	74109776	74112294	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
16	75152228	75159782	2	neutral	AA	36.3786	somatic	0	0.260924511617996	0.467302364038242
16	78337498	78350088	1	loss	A	-1	germline	1	0.000233563760785452	0.000192617348110935
16	82096872	82109462	2	neutral	AA	100	somatic	0	0.880712903733717	0.99857987053267
16	82298312	82300830	5	gain	AAABB	83.5266	somatic	0	0.0832755859205531	0.270056119033236
16	88986120	89046552	2	neutral	AA	12.1026	somatic	0	0.310139279215472	0.49270479505765
17	2316560	2359366	2	neutral	AA	21.8272	germline	1	0.567192448041031	0.736583771795531
17	2485266	2528072	2	neutral	AA	54.5783	somatic	0	0.0902467365641889	0.0642715162287154
17	17039306	17117364	2	neutral	AA	54.5681	germline	1	0.290188399976003	0.265966152612238
17	17925642	17955858	2	neutral	AA	100	somatic	0	0.640606081728696	0.63591971894966
17	21289690	21304798	4	gain	AABB	0.273092	germline	1	2.21324673082945e-05	1.23231718165417e-05
17	21853722	21858758	6	gain	-	-1	germline	1	0.0143092745231547	0.0366371892653546
17	21858758	21883938	3	gain	-	-1	somatic	0	4.3780297751636e-08	4.25862045627667e-09
17	22128184	22135738	5	gain	AAABB	1.63677	germline	1	0.00270084796005402	0.00495883909738803
17	22135738	22138256	4	gain	AAAB	4.9769	germline	1	0.0832934225901574	0.270087095375863
17	22138256	22148328	6	gain	AAAABB	0.376273	germline	1	0.000532222436220314	0.000671150069864623
17	22148328	22158400	4	gain	AAAB	5.07445	germline	1	0.000532324954361999	0.000671192899605266
17	26783966	26796556	4	gain	-	-1	germline	1	0.000107776656578392	9.12781831746701e-05
17	26796556	26809146	3	gain	-	-1	germline	1	0.000536602606708479	0.000676674731082239
17	26809146	26826772	5	gain	-	-1	germline	1	2.21188393935528e-05	1.23152129086757e-05
17	26826772	26864542	3	gain	-	-1	somatic	0	1.11225909016761e-10	6.25099971784948e-12
17	26864542	26867060	9	gain	-	-1	germline	1	0.0832725109454343	0.270050778546622
17	26867060	26877132	3	gain	-	-1	somatic	0	0.000660997099648103	0.00114092303171254
17	26877132	26879650	7	gain	-	-1	germline	1	0.0832731259330997	0.270051846637777
17	26937564	26940082	24	gain	AAAAAAAAAAAAAAAABBBBBBBB	21.0379	germline	1	0.0832669762220056	0.270041165864988
17	27818864	27828936	2	neutral	AA	100	somatic	0	0.665843081795921	0.725391085357588
17	32308458	32517452	2	neutral	AA	17.2037	somatic	0	0.304379044880501	0.117737642353644
17	38945906	38948424	4	gain	AABB	100	somatic	0	0.0832792760121103	0.270062527718934
17	53603184	53608220	2	neutral	AA	54.5678	somatic	0	0.0390540886311755	0.089852514568307
17	55499238	55501756	6	gain	-	-1	somatic	0	0.0832743559194681	0.270053982829339
17	56083414	56096004	1	loss	A	-1	germline	1	0.000287084402637902	0.000243395678471203
17	62791366	62806474	2	neutral	AA	36.3786	somatic	0	0.671493295770098	0.704295291679797
17	69438886	69451476	2	neutral	AA	54.5678	somatic	0	0.36190929486463	0.603983006123888
17	77803682	77811236	2	neutral	AA	15.5908	somatic	0	0.133571403007638	0.277629862419978
17	80742188	80744706	5	gain	AAABB	13.3532	germline	1	0.083277430949775	0.270059323362208
17	80946146	80999024	2	neutral	AA	100	somatic	0	0.0883476178816336	0.442004008802344
18	22740058	22742576	3	gain	AAB	47.1103	somatic	0	0.0833063407309761	0.270109528139488
18	24011648	24031792	2	neutral	AA	100	somatic	0	0.998389844878426	0.937029193570628
18	28319946	28322464	1	loss	A	-1	somatic	0	0.0833894246777703	0.270253771235781
18	29594054	29596572	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
18	30490462	30492980	11	gain	AAAAAABBBBB	26.4377	somatic	0	0.083271895961448	0.27004971045855
18	30757370	30759888	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
18	34985092	34987610	4	gain	AABB	11.7489	somatic	0	0.0832792760121103	0.270062527718934
18	39081878	39086914	1	loss	A	-1	somatic	0	0.0247931945958588	0.0693595315703129
18	40675772	40685844	1	loss	A	-1	germline	1	0.00206926052764476	0.00269854759695609
18	40872176	40874694	5	gain	-	-1	somatic	0	0.0832780459668742	0.270060391478033
18	41348078	41350596	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
18	44543420	44545938	20	gain	-	-1	somatic	0	0.0832688210967034	0.270044370064446
18	47849554	47852072	3	gain	AAB	72.5986	somatic	0	0.0833106471385448	0.270117006029572
18	53426924	53429442	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
18	56576942	56587014	1	loss	A	-1	somatic	0	0.00424152975164029	0.00849514389569972
18	56670108	56707878	2	neutral	AA	54.5678	germline	1	0.740837185061167	0.736651596597341
18	58060044	58067598	2	neutral	AA	100	somatic	0	0.742787668429689	0.713440410773641
18	63496406	63508996	2	neutral	AA	100	somatic	0	0.827862492478386	0.934887033473386
18	65495698	65498216	1	loss	A	-1	somatic	0	0.0833334125742384	0.270156534530255
18	65802894	65833110	2	neutral	AA	100	somatic	0	0.204190842128111	0.584098924184882
18	66057212	66064766	1	loss	A	-1	germline	1	0.00538775927639458	0.00884445391849142
18	69078812	69088884	1	loss	A	-1	germline	1	0.000778477658920227	0.00150033859591059
18	74615894	74618412	4	gain	-	-1	germline	1	0.0832891169038301	0.270079618090196
18	79198654	79201172	9	gain	AAAAABBBB	48.9869	germline	1	0.0832725109454343	0.270050778546622
18	79792902	79808010	2	neutral	AA	80.7294	somatic	0	0.0766912561077251	0.0414325341914831
18	80019522	80258732	2	neutral	AA	40.9502	somatic	0	1.6113894599335e-20	0
19	387772	397844	2	neutral	AA	54.5678	somatic	0	0.221785320673706	0.361589626495123
19	2611166	2656490	2	neutral	AA	30.5125	somatic	0	0.560332655549845	0.779211835663744
19	3233112	3250738	2	neutral	AA	6.74795	somatic	0	0.986463337493539	0.639021714576632
19	3709014	3716568	2	neutral	AA	100	somatic	0	0.305133896939996	0.349773746748294
19	3819806	3852540	2	neutral	AA	22.2745	somatic	0	0.885839384279336	0.456000058865838
19	4066570	4069088	2	neutral	AA	100	somatic	0	0.27753607233575	0.522399583432425
19	5783846	5788882	2	neutral	AA	29.3586	somatic	0	0.175575515816799	0.505374485700563
19	7448244	7453280	4	gain	AAAA	5.55581	germline	1	0.0143103420340175	0.0366380659899729
19	8880986	8918756	2	neutral	AA	1.72776	germline	1	0.816730715171494	0.671544879131691
19	11532440	11550066	2	neutral	AA	27.2987	somatic	0	0.79183944507138	0.401247810095349
19	11713736	11736398	2	neutral	AA	54.5681	germline	1	0.260935295358409	0.355621864056884
19	14214110	14216628	69	gain	-	-1	somatic	0	0.0832657463239354	0.270039029747434
19	15289296	15304404	2	neutral	AA	54.5678	somatic	0	0.278491130868461	0.345134113472642
19	19592558	19597594	2	neutral	AA	54.5678	somatic	0	0.229527051922096	0.293724865380613
19	19758746	19763782	2	neutral	AA	54.5802	somatic	0	0.354844570275458	0.670154110736754
19	22956606	22961642	1	loss	A	-1	somatic	0	0.0191082484382318	0.0456959120824705
19	24328916	24331434	4	gain	AABB	35.3442	germline	1	0.0833008041862012	0.270099913931411
19	24331434	24386830	5	gain	AAABB	0.32516	germline	1	4.52510662723966e-16	0
19	24386830	24404456	5	gain	AAABB	4.89154	germline	1	0.000107590959601647	9.0846044628945e-05
19	24404456	24414528	3	gain	AAB	-1	somatic	0	NA	NA
19	24414528	24417046	3	gain	AAB	8.36528	somatic	0	0.0834516276580567	0.270361723196417
19	24417046	27244760	3	gain	AAB	-1	somatic	0	0.0143103420340175	0.0366380659899729
19	27244760	27300156	3	gain	AAB	2.04806	somatic	0	8.14113484058624e-09	6.39948944947122e-08
19	27300156	27337926	2	neutral	AA	4.87758	somatic	0	1.35715915981513e-08	1.17073696292991e-08
19	27337926	27340444	6	gain	AAAABB	1.49825	germline	1	0.0832743559194681	0.270053982829339
19	27340444	27345480	3	gain	AAB	100	germline	1	0.0159811764521868	0.0406238073935872
19	27345480	27380732	7	gain	AAAAABB	0.305547	somatic	0	1.97555754005281e-09	7.55749907099812e-11
19	27380732	27383250	4	gain	AAAB	29.8545	germline	1	0.0832909621758928	0.270082822622694
19	27383250	27398358	7	gain	AAAAABB	0.507723	germline	1	2.21039690565566e-05	1.22948958514169e-05
19	27398358	27400876	4	gain	AABB	6.40988	germline	1	0.0832805060720637	0.27006466397217
19	27468862	27473898	1	loss	A	-1	somatic	0	0.0326206586758976	0.0622945574078756
19	28523904	28674984	2	neutral	AA	2.45461	somatic	0	0.0332564361325189	0.0126910242201116
19	29888660	29911322	2	neutral	AA	27.3736	somatic	0	0.399327165899593	0.757289548495488
19	33849474	33859546	2	neutral	AA	100	somatic	0	0.460586638228092	0.563318348268211
19	34390844	34393362	6	gain	AAAABB	1.28316	germline	1	0.0832737409244443	0.270052914732016
19	36140854	36145890	2	neutral	AA	54.5678	somatic	0	0.549774069084788	0.912695628762862
19	37991584	38009210	2	neutral	AA	54.5755	germline	1	0.585795720083076	0.686361049922886
19	38303816	38311370	2	neutral	AA	27.284	somatic	0	0.988388969454047	0.556109542897061
19	44666802	44669320	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
19	44707090	44722198	2	neutral	AA	36.3836	somatic	0	0.662782908219902	0.786646308127201
19	45598462	45641268	2	neutral	AA	28.7602	somatic	0	0.66210805916734	0.398771079643011
19	46185156	46200264	2	neutral	AA	14.4461	somatic	0	0.696743091715666	0.952580430801267
19	47071492	47079046	2	neutral	AA	46.2887	somatic	0	0.813912134083171	0.853246791177638
19	47232644	47491998	2	neutral	AA	16.8298	somatic	0	0.438566300127142	0.0201037945858167
19	47766460	47779050	2	neutral	AA	54.5678	somatic	0	0.560583959111178	0.489865966609578
19	48446320	48479054	2	neutral	AA	41.6854	somatic	0	0.403127958773428	0.127701218685077
19	48637688	48667904	2	neutral	AA	100	somatic	0	0.32612721027721	0.553046348761089
19	48667904	48670422	3	gain	AAB	33.6309	somatic	0	0.0833075711147386	0.270111664664093
19	48670422	48818984	2	neutral	AA	35.6039	somatic	0	0.735427044515396	0.610783248292603
19	49116108	49194166	2	neutral	AA	11.1238	somatic	0	0.347668878057121	0.75437669111066
19	49899206	49901724	2	neutral	AA	100	germline	1	0.365342110708562	0.608150862142903
19	52384472	52389508	1	loss	A	-1	germline	1	0.0186814253025753	0.0498361889299352
19	52684114	52724402	2	neutral	AA	21.797	somatic	0	0.891274324672668	0.856863370256415
19	53016490	53049224	3	gain	AAB	1.84111	germline	1	1.99019132543626e-09	7.63347163257322e-11
19	53474766	53590594	2	neutral	AA	20.0086	somatic	0	0.37081879697739	0.170061402869672
19	56146364	56204278	2	neutral	AA	15.0877	somatic	0	0.172705979485874	0.325055795080183
19	58029828	58049972	2	neutral	AA	54.5693	somatic	0	0.470073523347017	0.640094847104745
20	60432	62950	10	gain	-	-1	germline	1	0.083271895961448	0.27004971045855
20	65468	67986	5	gain	-	-1	germline	1	0.0832786609876526	0.270061459596942
20	1581304	1614038	1	loss	A	-1	germline	1	3.59870179040292e-07	5.20964722472428e-08
20	5647874	5650392	1	loss	A	-1	somatic	0	0.0837218141854379	0.270830235392254
20	8661920	8664438	5	gain	-	-1	somatic	0	0.0832780459668742	0.270060391478033
20	14954402	14956920	8	gain	-	-1	somatic	0	0.0832725109454343	0.270050778546622
20	25718852	25726406	3	gain	-	-1	germline	1	0.00270578547113444	0.00496614193635925
20	26315618	26323172	1	loss	A	-1	somatic	0	0.0232823130574596	0.0539965310159519
20	28773186	28788294	7	gain	-	-1	germline	1	0.00270051201339052	0.00495836445711473
20	28793330	28803402	3	gain	-	-1	somatic	0	0.000999798817299646	0.00225135699239876
20	28803402	28823546	11	gain	-	-1	germline	1	4.59540149013479e-06	1.66377726618094e-06
20	29264196	29269232	5	gain	-	-1	germline	1	0.0143097597466565	0.0366374815048546
20	29271750	29276786	3	gain	-	-1	germline	1	0.0143717934755446	0.0368158346318884
20	29276786	29279304	5	gain	-	-1	germline	1	0.0832755859205531	0.270056119033236
20	29279304	29286858	3	gain	-	-1	germline	1	0.00271367778378909	0.00498620106368852
20	29286858	29291894	5	gain	-	-1	germline	1	0.0143101479359082	0.036637773746394
20	29296930	29314556	3	gain	-	-1	germline	1	2.22088197938765e-05	1.24006591192272e-05
20	29407722	29410240	5	gain	-	-1	germline	1	0.0832755859205531	0.270056119033236
20	29692256	29702328	3	gain	-	-1	somatic	0	0.00288408847526883	0.00555127948535872
20	29702328	29704846	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
20	29704846	29858444	3	gain	-	-1	somatic	0	1.42428378601348e-07	5.71143511596262e-07
20	29876070	29878588	8	gain	-	-1	germline	1	0.0832725109454343	0.270050778546622
20	29886142	29888660	3	gain	-	-1	germline	1	0.0833075711147386	0.270111664664093
20	29891178	29893696	8	gain	-	-1	germline	1	0.0832725109454343	0.270050778546622
20	30150532	30153050	4	gain	-	-1	somatic	0	0.0832817361467344	0.270066800237741
20	30460246	30462764	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
20	30976436	30978954	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
20	30978954	31001616	3	gain	-	-1	somatic	0	0.000108476404510683	9.18549652610956e-05
20	31067084	31074638	46	gain	-	-1	germline	1	0.014306557539751	0.0366322215058954
20	31165286	31167804	6	gain	-	-1	germline	1	0.0832743559194681	0.270053982829339
20	31167804	31182912	3	gain	-	-1	somatic	0	2.23306917907072e-05	1.25090885760848e-05
20	31182912	31190466	16	gain	-	-1	germline	1	0.00270026449817744	0.00495842378487144
20	31190466	31192984	3	gain	-	-1	germline	1	0.083687847815549	0.270771371462224
20	31225718	31230754	4	gain	-	-1	germline	1	0.0143103420340175	0.0366380659899729
20	31230754	31235790	3	gain	-	-1	germline	1	0.0143600102637651	0.0367460431986009
20	31235790	31238308	5	gain	-	-1	germline	1	0.083277430949775	0.270059323362208
20	31238308	31240826	3	gain	-	-1	germline	1	0.0833838836607247	0.270244153280756
20	31240826	31243344	65	gain	-	-1	germline	1	0.0832657463239354	0.270039029747434
20	31243344	31245862	3	gain	-	-1	germline	1	0.0833192604946559	0.27013196226306
20	34652716	34657752	1	loss	A	-1	germline	1	0.0162672260999606	0.0421656374369216
20	37430070	37435106	2	neutral	AA	100	germline	1	0.12233006524697	0.172069779321167
20	40295554	40298072	1	loss	A	-1	somatic	0	0.0834189818058319	0.27030507121486
20	46786958	46789476	4	gain	AAAB	20.4674	germline	1	0.0832805060720637	0.27006466397217
20	48781214	48788768	2	neutral	AA	100	germline	1	0.674334984587287	0.601084652347671
20	48972582	49033014	2	neutral	AA	100	germline	1	0.716685666550409	0.558193767763284
20	56181616	56209314	2	neutral	AA	54.8143	germline	1	0.382442279414967	0.346358118026708
20	56526582	56536654	3	gain	-	-1	germline	1	0.000534091149032314	0.000672822329757405
20	58284146	58321916	2	neutral	AA	100	somatic	0	0.340085242053937	0.740400655316106
20	60993514	61016176	3	gain	AAB	2.43592	germline	1	2.12500611861256e-07	3.47524210519978e-08
20	61328408	61330926	3	gain	AAB	35.4268	somatic	0	0.0833131080238307	0.270121279177464
20	62146758	62159348	2	neutral	AA	72.8215	somatic	0	0.167388750237564	0.22093051139891
20	62975180	63045684	2	neutral	AA	17.5899	somatic	0	0.235914924189642	0.173143112859519
21	0	8989260	7	gain	AAAAABB	-1	somatic	0	2.21023019487545e-05	1.22931306695273e-05
21	8989260	8996814	9	gain	AAAAAABBB	1.81137	germline	1	0.00270049433304494	0.00495830513000883
21	8996814	10270922	7	gain	AAAAABB	-1	somatic	0	0.00270093637341757	0.00495883909738803
21	10270922	10273440	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
21	10273440	10520204	7	gain	AAAAABB	-1	somatic	0	NA	NA
21	10520204	10522722	3	gain	AAA	49.7178	germline	1	0.0833155689679986	0.270125552374697
21	10522722	10651140	7	gain	AAAAABB	-1	somatic	0	NA	NA
21	10651140	10691428	7	gain	AAAAABB	2.2438	somatic	0	1.97344689241953e-11	1.87405646556726e-13
21	10691428	10693946	60	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBB	100	germline	1	0.0832657463239354	0.270039029747434
21	10693946	10754378	7	gain	AAAAABB	0.54543	germline	1	4.36691743761093e-14	1.11022302462516e-16
21	13934612	14078138	2	neutral	AA	13.6421	germline	1	0.831769477769233	0.764133729240567
21	14654760	14667350	2	neutral	AA	100	germline	1	0.180171739537017	0.527450368305828
21	19474212	19476730	1	loss	A	-1	somatic	0	0.123393255640648	0.333975170516092
21	20287526	20290044	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
21	20587168	20589686	0	loss	-	-1	somatic	0	0.0833106471385448	0.270117006029581
21	21085732	21088250	2	neutral	AA	100	somatic	0	0.218992957286249	0.458005265259109
21	21649764	21732858	2	neutral	AA	69.2339	somatic	0	0.50299569860621	0.144458963649026
21	22558762	22563798	2	neutral	AA	100	germline	1	0.441591823709335	0.879740796902366
21	23548336	23553372	1	loss	A	-1	somatic	0	0.0428368113450032	0.0924861879803059
21	24097260	24099778	3	gain	-	-1	somatic	0	0.085665725267877	0.274183634894375
21	24437190	24495104	2	neutral	AA	100	somatic	0	0.114532072112127	0.0878594194977523
21	24976042	25054100	2	neutral	AA	100	somatic	0	0.398017997661194	0.647053121942705
21	25837198	25842234	2	neutral	AA	100	somatic	0	0.760074837939393	0.855769465005411
21	31072120	31087228	2	neutral	AA	100	somatic	0	0.232392224822646	0.271986424494872
21	31784714	31787232	4	gain	AAAA	100	germline	1	0.0832805060720637	0.27006466397217
21	33265298	33267816	2	neutral	AA	100	germline	1	0.476487774049978	0.702020154697297
21	35362792	35385454	2	neutral	AA	100	somatic	0	0.986894669482316	0.754051876846008
21	36150926	36176106	2	neutral	AA	91.3746	somatic	0	0.812262192721012	0.673993965508552
21	36307042	36359920	2	neutral	AA	21.8271	somatic	0	0.398261436030952	0.656431598628086
21	36480784	36498410	2	neutral	AA	17.9033	somatic	0	0.588091995433849	0.420346997966909
21	36626828	36662080	2	neutral	AA	100	somatic	0	0.193545661832547	0.228812074853387
21	37306688	37309206	1	loss	A	-1	somatic	0	0.126405616401538	0.338396308381309
21	37754892	37767482	2	neutral	AA	9.14892	germline	1	0.737967232136986	0.611196260081547
21	39696270	39716414	2	neutral	AA	54.5678	somatic	0	0.831340517323027	0.773668613352345
21	41803836	41806354	5	gain	AAAAA	12.5919	germline	1	0.0832780459668742	0.270060391478033
21	43334780	43337298	4	gain	AAAA	4.03721	somatic	0	0.0832835812863359	0.270070004659224
21	43956726	43966798	2	neutral	AA	23.6702	somatic	0	0.0319569333162189	0.0708049421163597
21	44984070	44989106	2	neutral	AA	54.5777	somatic	0	0.272128018313456	0.610472918279859
21	45510332	45548102	2	neutral	AA	11.1073	germline	1	0.61102969988142	0.975065602728823
21	45553138	45555656	1	loss	A	-1	somatic	0	0.086490080360164	0.275594542690408
22	10726680	10731716	11	gain	-	-1	germline	1	0.0143082070825391	0.0366345592016334
22	11212654	11215172	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
22	11366252	11368770	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
22	11620570	11628124	4	gain	AABB	10.3532	germline	1	0.0143144186308111	0.0366474188614511
22	11628124	11630642	4	gain	-	-1	germline	1	0.083285426459052	0.270073209108461
22	16261244	16268798	3	gain	-	-1	somatic	0	0.0031426681531628	0.00651205980040859
22	16558368	16795060	2	neutral	AA	3.33371	germline	1	0.350951638096546	0.348760721080091
22	17580676	17585712	2	neutral	AA	36.3786	somatic	0	0.630098196992737	0.916918497600848
22	17875282	17877800	4	gain	AAAB	77.2075	germline	1	0.0832811211075594	0.270065732103413
22	19713422	19728530	2	neutral	AA	19.8763	somatic	0	0.0800860852080006	0.0632308929896901
22	20395800	20410908	2	neutral	AA	41.6442	somatic	0	0.774050969636316	0.658983934816027
22	20665226	20672780	2	neutral	AA	54.5678	somatic	0	0.0576482307528236	0.117623311865984
22	21856240	21858758	2	neutral	AA	100	somatic	0	0.51479122452113	0.731116089572313
22	22901210	22903728	4	gain	AAAB	21.3914	germline	1	0.0832792760121103	0.270062527718934
22	23681790	23686826	1	loss	A	-1	germline	1	0.0282939700855893	0.0560127774807764
22	24225678	24233232	2	neutral	AA	54.5678	somatic	0	0.660275437376661	0.870066399970508
22	24832516	24852660	2	neutral	AA	28.0853	somatic	0	0.953751570880466	0.821169969142454
22	25696190	25701226	2	neutral	AA	54.5678	somatic	0	0.960689986563804	0.973748993584062
22	26728570	26748714	2	neutral	AA	100	germline	1	0.606350061368757	0.70056167870666
22	27171738	27174256	2	neutral	AA	100	germline	1	0.383359554904274	0.624407451505798
22	27494042	27496560	2	neutral	AA	100	somatic	0	0.356398569027215	0.599960186827908
22	29118152	29120670	4	gain	AABB	9.15563	germline	1	0.0832792760121103	0.270062527718934
22	31789750	31910614	2	neutral	AA	100	somatic	0	0.0841798647648109	0.0239166548198255
22	32144788	32147306	0	loss	-	-1	germline	1	0.0832851189279644	0.270107391627227
22	32691194	32693712	2	neutral	AA	100	somatic	0	0.331887987849752	0.576824051122839
22	35181496	35199122	2	neutral	AA	36.3933	germline	1	0.275024496479258	0.433630346311338
22	35299842	35302360	2	neutral	AA	100	germline	1	0.799694692395889	0.897602077135253
22	36578986	36682224	2	neutral	AA	42.3957	somatic	0	0.863462789311395	0.651481087904325
22	36745174	36747692	2	neutral	AA	27.6672	somatic	0	0.753114079384151	0.876226344090278
22	36747692	36752728	1	loss	A	-1	germline	1	0.0208233875718792	0.0555804214799654
22	38109930	38120002	2	neutral	AA	100	somatic	0	0.784512644503637	0.491974197139005
22	38860294	38867848	2	neutral	AA	49.7168	somatic	0	0.452511439161288	0.621630097571364
22	39663536	39671090	2	neutral	AA	54.5687	somatic	0	0.904395567794814	0.85953001112282
22	39779364	39784400	3	gain	-	-1	somatic	0	0.0173304489463745	0.0457444707195032
22	40489440	40491958	2	neutral	AA	100	somatic	0	0.917992485000918	0.941710167576254
22	41710670	41713188	2	neutral	AA	100	somatic	0	0.160771133802626	0.386055800678615
22	43004922	43012476	2	neutral	AA	100	somatic	0	0.281920779304459	0.331105404423395
22	44251332	44253850	2	neutral	AA	100	somatic	0	0.731556146931112	0.865580194982612
22	44301692	44304210	3	gain	AAB	100	somatic	0	0.0834577884130271	0.270372413221064
22	46940556	46943074	1	loss	A	-1	somatic	0	0.0990541000400163	0.296463564045413
22	47021132	47028686	2	neutral	AA	54.5678	somatic	0	0.19531603103733	0.431527424217341
22	48476536	48481572	2	neutral	AA	100	somatic	0	0.961233039029814	0.839519202254403
22	48924740	48929776	1	loss	A	-1	somatic	0	0.0410658399485564	0.0862012028847743
22	50395252	50402806	3	gain	AAB	33.8041	germline	1	0.00302214771654309	0.0059711509966851
22	50402806	50420432	2	neutral	AA	14.2265	somatic	0	0.182699202983372	0.496377582879358
22	50629426	50639498	3	gain	AAB	15.4052	germline	1	0.000535058700940984	0.000676912143937169
X	3522682	3525200	2	gain	AA	9.9414	somatic	0	0.115048788416854	0.321506801193437
X	4441752	4444270	2	gain	-	-1	somatic	0	0.120244246089499	0.329307994593795
X	4688516	4691034	3	gain	-	-1	somatic	0	0.0842273745208849	0.271705731406688
X	5380966	5383484	2	gain	-	-1	somatic	0	0.877737449059193	0.928351064295449
X	20297598	20300116	12	gain	-	-1	somatic	0	0.0832712809811409	0.270048642373562
X	26083962	26088998	0	loss	-	-1	somatic	0	0.0150035744474322	0.038729507160328
X	30017078	30019596	0	loss	-	-1	somatic	0	0.0832851189279644	0.270107391627227
X	53749228	53751746	4	gain	-	-1	somatic	0	0.0832964981907803	0.270092436386709
X	68592838	68595356	2	gain	-	-1	somatic	0	0.104452470193645	0.305086310728564
X	81671330	81673848	2	gain	-	-1	somatic	0	0.0928395337190441	0.286287380013019
X	88903026	88905544	4	gain	-	-1	somatic	0	0.0832792760121103	0.270062527718934
X	105446286	105448804	5	gain	-	-1	somatic	0	0.0832755859205531	0.270056119033236
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X	112708198	112710716	3	gain	-	-1	somatic	0	0.0833192604946559	0.27013196226306
X	125270500	125273018	30	gain	-	-1	somatic	0	0.0832669762220056	0.270041165864988
X	126365830	126368348	3	gain	-	-1	somatic	0	0.0844153025251445	0.272029875641353
X	127529146	127531664	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
X	150581436	150583954	5	gain	-	-1	somatic	0	0.0832786609876526	0.270061459596942
X	151447628	151450146	2	gain	-	-1	somatic	0	0.10782554596003	0.310381477871859
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Y	10804738	10809774	4	gain	-	-1	germline	1	0.0143106331855358	0.0366389427329471
Y	10812292	10845026	2	gain	-	-1	germline	1	0.0329085693167659	0.123077919505454
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Y	10986034	10988552	19	gain	-	-1	germline	1	0.0832688210967034	0.270044370064446
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Y	11013732	11016250	24	gain	-	-1	germline	1	0.0832675911765592	0.27004223392839
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Y	11718772	11721290	2	gain	AA	27.3188	germline	1	0.144513240248613	0.364101507239825
Y	11721290	11723808	48	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBB	100	germline	1	0.0832669762220056	0.270041165864988
Y	11723808	11728844	2	gain	AA	29.8949	germline	1	0.0736020678516545	0.131239486054049
Y	11728844	11731362	5	gain	AAAAA	15.7726	germline	1	0.083277430949775	0.270059323362208
Y	11731362	11743952	2	gain	AA	2.96439	germline	1	0.0262896382016781	0.0216774799419009
Y	11743952	11746470	3	gain	AAB	2.41853	germline	1	0.0839283224783684	0.271187900409403
Y	11746470	11748988	14	gain	AAAAAAAAABBBBB	10.2374	germline	1	0.0832688210967034	0.270044370064446
Y	12590000	12592518	5	gain	-	-1	somatic	0	0.083277430949775	0.270059323362208
Y	26637922	26640440	8	gain	AAAAABBB	74.7398	germline	1	0.0832725109454343	0.270050778546622
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