chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5668943	5677994	3	gain	-	-1	germline	1	0.00270320798181403	0.0049649600212115
1	16904251	16943472	3	gain	-	-1	germline	1	4.6169758325782e-06	1.67501366621359e-06
1	31431106	31434123	6	gain	-	-1	germline	1	0.0832756039451972	0.270056042539222
1	55660633	55666667	1	loss	A	-1	germline	1	0.0186475571306067	0.0499668995184368
1	109643814	109649848	1	loss	A	-1	germline	1	0.0143728379565593	0.0368200760238132
1	125081803	125084820	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
1	125084820	125163262	3	gain	-	-1	germline	1	0.000405516580779788	0.00831136864727577
1	125163262	125166279	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
1	151399094	151453400	2	neutral	AA	54.5686	somatic	0	0.00410291513103224	0.0116470659886739
1	152581758	152614945	1	loss	A	-1	germline	1	6.79589518341921e-08	6.71285682596334e-09
1	155010443	155019494	2	neutral	AA	54.7047	somatic	0	0.666957392809044	0.514489965881295
1	156262498	156274566	2	neutral	AA	100	somatic	0	0.50925846830522	0.600845017580297
1	161789642	161955577	2	neutral	AA	100	somatic	0	0.105550133145092	0.10817600873507
1	162121512	162136597	2	neutral	AA	100	somatic	0	0.569625477706663	0.833161934271796
1	165747946	165760014	2	neutral	AA	100	somatic	0	0.84435618101861	0.973221953642787
1	166106969	166128088	2	neutral	AA	27.2839	somatic	0	0.292512995347243	0.595602546048459
1	168912779	168930881	2	neutral	AA	100	somatic	0	0.775876726491907	0.964545398977161
1	170309650	170478602	2	neutral	AA	38.6325	somatic	0	0.000502837197546168	0.00198095711804536
1	181306615	181318683	2	neutral	AA	100	somatic	0	0.18678440489954	0.0947333718337161
1	185714452	185726520	2	neutral	AA	36.507	somatic	0	0.918149577712153	0.996394330043823
1	186272597	186281648	2	neutral	AA	100	somatic	0	0.176750296109274	0.320298525814424
1	190022728	190077034	2	neutral	AA	77.7618	somatic	0	0.498947700298253	0.667490049450954
1	194512024	195079220	2	neutral	AA	70.0896	somatic	0	0.252234152857085	0.161563680988758
1	200862809	200998574	2	neutral	AA	32.7519	germline	1	0.651195421603288	0.423730714480924
1	202175204	202208391	2	neutral	AA	51.8131	somatic	0	0.331411485631394	0.669720834891292
1	205454683	205472785	2	neutral	AA	54.5679	somatic	0	0.0183826011536757	0.00827196930549157
1	206682602	206697687	2	neutral	AA	54.568	somatic	0	0.627427553489127	0.566723923528064
1	212182593	212224831	2	neutral	AA	96.9393	somatic	0	0.0379185152405772	0.120034564122147
1	213854011	213992793	2	neutral	AA	12.3626	somatic	0	0.0320067137901753	0.0517700259213755
1	219785433	219803535	2	neutral	AA	100	germline	1	0.668204064373218	0.639156521117979
1	224012250	224015267	8	gain	AAAAAAAA	1.88864	germline	1	0.0832704296125575	0.270047055932389
1	226878400	226896502	2	neutral	AA	63.541	somatic	0	0.774907475090464	0.877972560607387
1	227569293	227578344	2	neutral	AA	12.1262	somatic	0	0.151733503471741	0.210422557551042
1	233440375	233443392	2	neutral	AA	100	somatic	0	0.633006602067498	0.810613765609582
1	234776906	234782940	7	gain	AAAAABB	3.89302	germline	1	0.0143084441409124	0.0366349161590218
1	235262643	235277728	2	neutral	AA	100	somatic	0	0.0886712486365901	0.329061951545774
1	236095335	236098352	5	gain	AAAAB	40.38	somatic	0	0.0832756039451972	0.270056042539222
1	237685294	237706413	2	neutral	AA	100	germline	1	0.527262125654738	0.524100146843294
1	245864381	245924721	2	neutral	AA	100	somatic	0	0.0428015165809263	0.0677351635115119
1	247460374	247463391	2	neutral	AA	100	somatic	0	0.474308074566035	0.700335922692421
2	3179918	3182935	5	gain	AAAAA	6.13583	germline	1	0.0832763431568356	0.270057326358019
2	3182935	3201037	2	neutral	AA	40.7652	somatic	0	0.996661087709238	0.996788401801593
2	4724622	4727639	2	neutral	AA	100	somatic	0	0.917771327371026	0.941656893291212
2	4968999	5020288	2	neutral	AA	24.8726	somatic	0	0.86121632117739	0.861574813591683
2	5020288	5023305	4	gain	AAAB	86.8417	germline	1	0.0832785608236434	0.270061177841138
2	5023305	5029339	2	neutral	AA	100	somatic	0	0.087767345260427	0.125892736447153
2	5831861	5834878	2	neutral	AA	100	somatic	0	0.433227730457861	0.667286702704444
2	9379853	9382870	2	neutral	AA	100	somatic	0	0.768607226148621	0.883618236680132
2	14943201	14949235	2	neutral	AA	54.5707	somatic	0	0.741575358332425	0.688647387212801
2	35751450	35766535	1	loss	A	-1	germline	1	0.00028261575028095	0.00022000939289446
2	38729229	38744314	3	gain	-	-1	germline	1	0.000107854177226165	9.12066278085932e-05
2	52522953	52559157	1	loss	A	-1	germline	1	5.20295269903957e-08	6.64419275153705e-09
2	89773852	89825141	4	gain	-	-1	somatic	0	1.97635140960351e-11	1.87738713464114e-13
2	89825141	89843243	23	gain	-	-1	germline	1	2.20951700888268e-05	1.22916062216261e-05
2	89843243	89852294	4	gain	-	-1	germline	1	0.00270133677288261	0.0049596079687928
2	91412083	91415100	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
2	109197298	109200315	11	gain	-	-1	germline	1	0.0832696904434414	0.270045772149233
2	239622208	239625225	2	neutral	AA	100	somatic	0	0.787057046200016	0.892051025232752
2	239914857	239981231	2	neutral	AA	100	germline	1	0.0119763539253608	0.0368899278050432
2	240002350	240026486	2	neutral	AA	54.5678	germline	1	0.934324385760696	0.793166403286873
2	240083809	240098894	2	neutral	AA	73.0696	somatic	0	0.311476571611836	0.296568667909124
2	240780736	240813923	2	neutral	AA	12.9336	somatic	0	0.336286283134725	0.686867123901241
2	241589292	241592309	4	gain	AAAB	10.1468	somatic	0	0.0832778215960587	0.270059894008976
2	241592309	241598343	2	neutral	AA	20.0463	somatic	0	0.864314051646592	0.693097011630469
3	9319513	9328564	1	loss	A	-1	germline	1	0.00514436269386135	0.00939327612057084
3	15489278	15558669	2	neutral	AA	36.3786	somatic	0	0.172979883264573	0.296479274695264
3	19972540	20023829	2	neutral	AA	25.1465	germline	1	0.00460563086151208	0.00549391663779975
3	75669377	75672394	6	gain	AAAAAA	2.38346	germline	1	0.0832741255378665	0.270053474914995
3	75711615	75931856	2	neutral	AA	0.478609	somatic	0	0.0124841082740016	0.0801238691471349
3	76619732	76628783	2	neutral	AA	100	germline	1	0.594487356245559	0.772876750807338
3	82620545	82638647	2	neutral	AA	100	somatic	0	0.967325162075576	0.712999145744383
3	84650986	84708309	2	neutral	AA	36.3786	somatic	0	0.0986251136099949	0.17264708125931
3	85628494	86081044	2	neutral	AA	26.8395	somatic	0	0.00340828668649914	0.000727002509273711
3	88123553	88147689	2	neutral	AA	56.9165	somatic	0	0.600797777694884	0.976343706639076
3	90392337	90669901	2	neutral	AA	1.1558	somatic	0	2.27233791663228e-19	2.64233079860787e-14
3	90669901	90712139	1	loss	A	-1	germline	1	2.21801120072563e-07	1.40167055739937e-09
3	96619425	96622442	0	loss	-	-1	germline	1	0.0832785608236434	0.270061177841144
3	97313335	97325403	2	neutral	AA	36.3786	somatic	0	0.276550949009373	0.423565074401954
3	105960057	105972125	2	neutral	AA	54.5678	somatic	0	0.0419736115982402	0.0488884299638273
3	119174517	119213738	2	neutral	AA	100	germline	1	0.257949636854542	0.1489049837153
3	136302026	136308060	0	loss	-	-1	germline	1	0.0143076277104077	0.0366356186431649
3	136872239	136986885	2	neutral	AA	54.5693	somatic	0	0.058305293517509	0.0422685868610742
3	161442687	161524146	2	neutral	AA	15.7467	somatic	0	0.131605722489032	0.257679752220137
3	162794303	162908949	1	loss	A	-1	somatic	0	1.99095801868608e-19	0
3	180033441	180078696	2	neutral	AA	100	germline	1	0.230308167025146	0.669246420336072
3	182640129	182679350	2	neutral	AA	54.5678	somatic	0	0.292981621589373	0.136563366225335
3	186691960	186701011	1	loss	A	-1	germline	1	0.00455017505172007	0.00744487379708214
3	191347191	191353225	1	loss	A	-1	somatic	0	0.0180556802709324	0.0471615072952376
3	193157391	193169459	1	loss	A	-1	germline	1	0.0203844093662488	0.0554279011337639
4	126714	129731	0	loss	-	-1	germline	1	0.0832667338201285	0.270040637061164
4	10230647	10233664	1	loss	A	-1	germline	1	0.0833073948457747	0.270111250770387
4	21861182	21870233	2	neutral	AA	22.0159	somatic	0	0.986657124106196	0.853262764967105
4	22714993	22721027	2	neutral	AA	21.8284	somatic	0	0.567182735384722	0.949681120305188
4	38590447	38756382	2	neutral	AA	24.9963	somatic	0	0.0121196091252507	0.0366126596459376
4	40292035	40298069	3	gain	AAB	4.53338	germline	1	0.0143177776943296	0.0366542387678094
4	45016657	45022691	2	neutral	AA	35.0039	somatic	0	0.936775560694111	0.986749401767368
4	49089607	49092624	22	gain	AAAAAAAAAAAAAAAAAAAAAA	28.6455	germline	1	0.0832667338201285	0.270040637061158
4	49146930	49155981	91	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB	100	germline	1	0.0143065780744276	0.0366321063403103
4	49653786	49656803	11	gain	AAAAAAAAAAA	5.20562	germline	1	0.0832696904434414	0.270045772149233
4	58689701	58740990	2	neutral	AA	100	somatic	0	0.00366287107268584	0.00566274124168509
4	63827652	63851788	1	loss	A	-1	germline	1	0.000127546498683507	4.3086634068823e-05
4	67079978	67110148	2	neutral	AA	54.5732	germline	1	0.546514069146536	0.772214109955877
4	68519087	68621665	1	loss	A	-1	germline	1	3.03162305087176e-14	0
4	74151826	74163894	2	neutral	AA	100	somatic	0	0.399852859790381	0.570843185670453
4	75777989	75793074	2	neutral	AA	100	somatic	0	0.398818752491132	0.577635980480995
4	76532239	76565426	2	neutral	AA	54.5678	germline	1	0.91185679482906	0.97473280321824
4	105513541	105522592	2	neutral	AA	100	somatic	0	0.947060797559074	0.972672467234559
4	107040143	107100483	2	neutral	AA	100	somatic	0	0.257015397286919	0.185979396289813
4	116260095	116290265	2	neutral	AA	100	somatic	0	0.00755832187983359	0.0167056600516857
4	116597999	116610067	2	neutral	AA	100	somatic	0	0.657682948299949	0.670944159602173
4	121174788	121220043	2	neutral	AA	100	somatic	0	0.0785061357534515	0.187073891962402
4	127872528	127914766	2	neutral	AA	65.1448	somatic	0	0.0194742301618454	0.049295350583567
4	132551895	132582065	2	neutral	AA	100	germline	1	0.0183242965608649	0.0266255683982488
4	142248533	142275686	2	neutral	AA	100	somatic	0	0.632647621224432	0.793510953821328
4	145702998	145862899	2	neutral	AA	20.9109	somatic	0	0.402404473886031	0.751696454345909
4	149275126	149347534	2	neutral	AA	100	somatic	0	0.530623149378512	0.624987655232021
4	160730675	160736709	2	neutral	AA	100	somatic	0	0.592724718113942	0.568465420245432
4	162884813	162890847	2	neutral	AA	100	germline	1	0.207787455819424	0.455111625956697
4	164882067	164888101	2	neutral	AA	54.5679	somatic	0	0.0946760188921136	0.128962448675415
4	165081189	165087223	1	loss	A	-1	germline	1	0.0222292248305014	0.0612910207384574
4	170686775	170692809	2	neutral	AA	13.642	somatic	0	0.962579886961411	0.919213396124909
4	171628079	171700487	1	loss	A	-1	germline	1	6.92839416657621e-16	0
4	172484907	172503009	2	neutral	AA	100	germline	1	0.462490582285633	0.873309556305202
4	172503009	172506026	0	loss	-	-1	germline	1	0.0832859533918463	0.270074016407784
4	176096256	176280293	2	neutral	AA	22.0725	germline	1	0.57154175915167	0.487705324866145
4	181584179	181641502	2	neutral	AA	28.5576	somatic	0	0.0343844222257469	0.056845932004532
4	184468431	184558941	2	neutral	AA	22.545	somatic	0	0.0745438388340052	0.0135780957271483
4	185518347	185524381	1	loss	A	-1	germline	1	0.0213148796306477	0.0570659230937358
5	45255	54306	2	neutral	AA	36.9915	somatic	0	0.0485882781388809	0.045446773282371
5	413329	416346	4	gain	AABB	6.34028	germline	1	0.0832815177871374	0.270066313214333
5	1807183	1813217	2	neutral	AA	54.568	somatic	0	0.830354876914393	0.916387539104374
5	1994237	2021390	2	neutral	AA	71.6599	somatic	0	0.00410451828045563	0.00121013036127593
5	3321717	3324734	4	gain	AAAB	22.7503	germline	1	0.0832815177871374	0.270066313214333
5	3759182	3786335	2	neutral	AA	16.2994	somatic	0	0.0149990009026824	0.037524324519728
5	4902625	4947880	2	neutral	AA	94.9702	somatic	0	0.986446576240744	0.897137352645083
5	5011237	5038390	2	neutral	AA	54.5678	somatic	0	0.174279464715777	0.180517609132884
5	5143985	5150019	2	neutral	AA	100	somatic	0	0.396365380391935	0.448637536739718
5	5774538	5789623	2	neutral	AA	44.7086	somatic	0	0.830155824045263	0.996659728010158
5	7738605	7744639	2	neutral	AA	24.4561	somatic	0	0.502986960219254	0.565290757858055
5	8836793	8845844	2	neutral	AA	100	somatic	0	0.197260920880407	0.401669222263887
5	11775351	11853793	2	neutral	AA	53.1417	somatic	0	0.047746991896459	0.0950321592988627
5	12810182	12819233	1	loss	A	-1	germline	1	0.00588929112283411	0.0093013631613853
5	12951981	12954998	2	neutral	AA	17.842	somatic	0	0.258656653115364	0.502360108822245
5	13911387	13989829	2	neutral	AA	53.8961	somatic	0	0.119895973650984	0.0865776185876614
5	14026033	14038101	2	neutral	AA	100	somatic	0	0.206974782398697	0.131024375730788
5	14873810	14900963	2	neutral	AA	38.0549	somatic	0	0.181044541522778	0.358560308425626
5	16997778	17003812	2	neutral	AA	100	somatic	0	0.495333951716084	0.856288613937994
5	17712807	17715824	4	gain	AAAB	15.2206	germline	1	0.0832815177871374	0.270066313214333
5	18687298	18690315	2	neutral	AA	100	somatic	0	0.719631989970547	0.859542959238356
5	19043304	19064423	2	neutral	AA	100	somatic	0	0.658674500800597	0.861601194019059
5	21013405	21022456	2	neutral	AA	100	somatic	0	0.649284666133236	0.887863750121261
5	24528210	24558380	2	neutral	AA	100	somatic	0	0.414514742223962	0.429636579839412
5	27720196	27726230	2	neutral	AA	100	somatic	0	0.645270796979411	0.89514925622044
5	28344715	28359800	2	neutral	AA	100	somatic	0	0.708466608006449	0.897502855263629
5	28730891	28764078	2	neutral	AA	53.0981	somatic	0	0.461015290425996	0.353580678673859
5	30885029	30915199	2	neutral	AA	100	somatic	0	0.162277573511913	0.317313197800192
5	31618160	31630228	2	neutral	AA	55.8746	somatic	0	0.410071811797711	0.160455926226719
5	32037523	32043557	2	neutral	AA	27.3088	somatic	0	0.140733939717474	0.330391704102512
5	34439055	34466208	2	neutral	AA	36.3915	somatic	0	0.637195555922971	0.520534187502096
5	35407512	35416563	2	neutral	AA	100	somatic	0	0.00757809648755813	0.0142935111466015
5	36234170	36351833	2	neutral	AA	36.3805	somatic	0	0.0707837444683806	0.106136813188641
5	43309035	43333171	2	neutral	AA	54.5678	somatic	0	0.573684800343147	0.376184694344069
5	43496089	43508157	2	neutral	AA	100	somatic	0	0.75457675810891	0.645447721362113
5	44289560	44298611	2	neutral	AA	100	somatic	0	0.665115658215544	0.873546474087857
5	44687804	44702889	2	neutral	AA	27.5664	somatic	0	0.287816634069115	0.444571522810105
5	44841671	44847705	2	neutral	AA	27.4094	somatic	0	0.346815353823187	0.774626820678381
5	45945893	45960978	2	neutral	AA	10.9367	somatic	0	0.379807942761083	0.440669713257152
5	46323018	46362239	2	neutral	AA	3.78317	somatic	0	0.0121315359519757	0.0214857549897998
5	46404477	46410511	1	loss	A	-1	germline	1	0.0144921275141276	0.0371900058783545
5	50151591	50190812	2	neutral	AA	23.3705	somatic	0	0.0126104745499773	0.0422584203165102
5	50193829	50242101	2	neutral	AA	3.89307	somatic	0	0.000367667186342768	0.00725715668783244
5	50655430	50830416	2	neutral	AA	42.9456	somatic	0	0.468686097763115	0.637912703474085
5	52022131	52070403	2	neutral	AA	54.6032	somatic	0	0.227265773455408	0.412715236238245
5	58025961	58038029	1	loss	A	-1	germline	1	0.00179473086581519	0.0017240103889643
5	61966163	62014435	2	neutral	AA	54.5678	somatic	0	0.0255173103499624	0.130827432772087
5	64458205	64506477	2	neutral	AA	100	somatic	0	0.0470691860154919	0.120712836904759
5	65004282	65037469	2	neutral	AA	37.1413	somatic	0	0.480527397133959	0.638518497758706
5	65429679	65529240	2	neutral	AA	100	somatic	0	0.298163796839501	0.0944678450985008
5	68202302	68208336	2	neutral	AA	54.5679	somatic	0	0.476925399279577	0.686982683300414
5	68642784	68645801	2	neutral	AA	100	somatic	0	0.811644206924379	0.902729135397155
5	73029502	73050621	2	neutral	AA	100	somatic	0	0.0141737716123625	0.0737716953769222
5	74106571	74130707	2	neutral	AA	100	somatic	0	0.693669662912729	0.914570637397536
5	74682818	74688852	2	neutral	AA	100	somatic	0	0.516786513854117	0.841725272696857
5	76942551	76951602	2	neutral	AA	100	somatic	0	0.578858140575854	0.837272406461964
5	78758785	78761802	2	neutral	AA	100	somatic	0	0.552411347010422	0.758012550033071
5	83305404	83311438	2	neutral	AA	70.2665	somatic	0	0.605269676047361	0.932148662501485
5	84620816	84650986	2	neutral	AA	54.8372	somatic	0	0.979439579145598	0.351170399350453
5	84650986	84660037	1	loss	A	-1	germline	1	0.0148720162323479	0.0383233829367268
5	86476271	86572815	2	neutral	AA	51.9139	somatic	0	0.576412128802813	0.124391306731956
5	86814175	86823226	2	neutral	AA	100	somatic	0	0.529290454355676	0.652170315471642
5	86916753	86922787	1	loss	A	-1	germline	1	0.0206361861873008	0.0561870385981998
5	90537153	90712139	2	neutral	AA	54.568	somatic	0	0.120536555129557	0.0779486196295214
5	99008889	99011906	0	loss	-	-1	germline	1	0.0832689512796405	0.270044488370538
5	101395336	101437574	2	neutral	AA	8.39507	somatic	0	0.969148487694996	0.42288789800325
5	104499829	104599390	2	neutral	AA	28.7871	somatic	0	0.00379162653824045	0.00732158916714165
5	104762308	104780410	2	neutral	AA	100	somatic	0	0.0171541970671809	0.0441680964963441
5	108331419	108370640	2	neutral	AA	100	somatic	0	0.93097586709362	0.769819870116038
5	109200315	109221434	2	neutral	AA	100	somatic	0	0.783763274944001	0.980903340199465
5	109836902	109839919	2	neutral	AA	100	somatic	0	0.170807821026288	0.399156862673121
5	113378860	113381877	2	neutral	AA	100	somatic	0	0.399339165926674	0.638562021028717
5	120043413	120049447	1	loss	A	-1	germline	1	0.0143333066135087	0.0366781408654316
5	125827002	125851138	2	neutral	AA	100	somatic	0	0.15942847029498	0.164388485175869
5	127673406	127709610	2	neutral	AA	54.5681	somatic	0	0.226474329871447	0.451508579033077
5	128729356	128762543	2	neutral	AA	10.9171	somatic	0	0.303820206816401	0.400903478789399
5	131655846	131667914	2	neutral	AA	54.5678	somatic	0	0.0844369336707858	0.0838491115926058
5	134968512	134998682	2	neutral	AA	100	somatic	0	0.102040512115245	0.0851303053942909
5	135496487	135553810	2	neutral	AA	100	somatic	0	0.00823071568720537	0.0192532847364115
5	137517877	137520894	1	loss	A	-1	germline	1	0.0833044371380438	0.270106114773479
5	139068615	139382383	2	neutral	AA	44.8745	somatic	0	2.29176467831411e-07	3.00841908051908e-08
5	140999495	141029665	2	neutral	AA	100	somatic	0	0.39750130255335	0.682417305859513
5	141174481	141177498	6	gain	AAAAAB	55.2625	germline	1	0.0832748647388742	0.270054758724881
5	142218363	142248533	2	neutral	AA	39.518	somatic	0	0.676318547284529	0.869758909211746
5	143017868	143035970	2	neutral	AA	100	somatic	0	0.600331043681957	0.498019720037134
5	145597403	145618522	2	neutral	AA	54.5787	somatic	0	0.934088496559814	0.824868633664058
5	147585606	147703269	2	neutral	AA	38.5493	somatic	0	0.464040806040013	0.278405504028726
5	148210125	148216159	2	neutral	AA	100	somatic	0	0.215047314502018	0.538666594769136
5	148807491	148810508	2	neutral	AA	100	somatic	0	0.825038079341771	0.90829520875383
5	150822847	150843966	1	loss	A	-1	germline	1	1.41263710309151e-05	6.5141331064833e-06
5	154868644	154886746	2	neutral	AA	100	germline	1	0.759230033169094	0.828060321217737
5	156051308	156060359	1	loss	A	-1	germline	1	0.00543623487991859	0.00887645400931236
5	157846423	157852457	2	neutral	AA	54.5775	somatic	0	0.755559482453658	0.72381487357933
5	158890305	158899356	2	neutral	AA	36.7595	somatic	0	0.362438918952453	0.31135461752789
5	162739997	162743014	2	neutral	AA	100	germline	1	0.155391017087728	0.378912252235955
5	162812405	162818439	2	neutral	AA	100	somatic	0	0.527896826875429	0.897701479886189
5	164716132	164725183	2	neutral	AA	56.3617	somatic	0	0.710766693579564	0.73585701925983
5	165108342	165114376	2	neutral	AA	100	somatic	0	0.0962197053267818	0.163094980050991
5	165168682	165174716	2	neutral	AA	36.3789	somatic	0	0.193276694236234	0.397673499959324
5	168505484	168526603	2	neutral	AA	54.5791	somatic	0	0.208295859524054	0.53981277725342
5	172569383	172599553	2	neutral	AA	37.4609	somatic	0	0.419738502326001	0.436926670513673
5	173049086	173052103	2	neutral	AA	100	somatic	0	0.401469804102355	0.64036037878767
5	180914405	181074306	2	neutral	AA	15.3167	somatic	0	0.628144332106828	0.728987113783669
6	256445	295666	5	gain	AAABB	1.34235	germline	1	1.97631611054899e-09	7.55939755237023e-11
6	295666	383159	5	gain	AAABB	0.896391	somatic	0	4.96969641223552e-20	0
6	4395769	4431973	2	neutral	AA	100	somatic	0	0.370635834607079	0.81678918525575
6	5816776	5886167	2	neutral	AA	3.7646	somatic	0	0.165921470721248	0.182620790392882
6	8438549	8462685	2	neutral	AA	27.7716	somatic	0	0.706933587913529	0.957207533671278
6	9654400	9693621	2	neutral	AA	100	somatic	0	0.422399387381292	0.103480537725332
6	10203494	10215562	2	neutral	AA	36.5534	somatic	0	0.0692222142732248	0.140462524852932
6	16134916	16140950	2	neutral	AA	100	somatic	0	0.661590553567656	0.945332614527176
6	27125847	27258595	2	neutral	AA	100	somatic	0	0.47630585709632	0.417338136858986
6	32490073	32640923	1	loss	A	-1	germline	1	4.22279422759854e-13	2.52020626589911e-14
6	32643940	32668076	1	loss	A	-1	germline	1	0.000150180000955814	0.000254197518292254
6	34161491	34173559	2	neutral	AA	100	somatic	0	0.258131933270358	0.591761791786488
6	35787654	35799722	4	gain	AABB	2.88359	germline	1	0.00053245933578949	0.00067141430992923
6	36792315	36813434	2	neutral	AA	54.5678	somatic	0	0.128916370341542	0.137201062321628
6	43499106	43517208	2	neutral	AA	100	somatic	0	0.187377507414409	0.2497069317164
6	60237422	60240439	4	gain	-	-1	germline	1	0.0832778215960587	0.270059894008976
6	61411035	61420086	1	loss	A	-1	somatic	0	0.00511855791836758	0.0083016363502324
6	64262100	64280202	2	neutral	AA	100	germline	1	0.0529143263948591	0.226932478220392
6	64787058	64808177	2	neutral	AA	54.8563	germline	1	0.705692150334183	0.844687697119082
6	66298575	66337796	1	loss	A	-1	germline	1	2.9282603430911e-09	1.06872399818769e-10
6	73883313	73892364	1	loss	A	-1	germline	1	0.00381452121169799	0.00670059265438516
6	74782379	74890991	2	neutral	AA	100	somatic	0	0.639134568240828	0.669333124341452
6	78257963	78327354	1	loss	A	-1	germline	1	7.64915944649871e-15	0
6	80222030	80252200	2	neutral	AA	37.0746	somatic	0	0.319242306162326	0.477259791323925
6	94257114	94284267	2	neutral	AA	100	somatic	0	0.0560967974384683	0.154201609844874
6	95644934	95717342	2	neutral	AA	100	somatic	0	0.171033566877728	0.325382955408567
6	98791665	98855022	2	neutral	AA	85.1833	somatic	0	0.649770129069203	0.354223632851692
6	99476524	99509711	2	neutral	AA	62.121	somatic	0	0.186274270969611	0.264067755782784
6	103290012	103314148	1	loss	A	-1	germline	1	1.26694478128069e-05	6.14574346968766e-06
6	104421387	104439489	2	neutral	AA	100	somatic	0	0.485990779792074	0.871023534447471
6	110992413	111010515	2	neutral	AA	77.3993	somatic	0	0.659692484038081	0.601853538015725
6	118643525	118646542	4	gain	AAAA	9.76367	germline	1	0.0832778215960587	0.270059894008976
6	136401587	136419689	2	neutral	AA	27.284	germline	1	0.879296676340664	0.976627904249284
6	140960274	141020614	2	neutral	AA	15.7463	somatic	0	0.016905786970409	0.0555504631860675
6	146505520	146541724	2	neutral	AA	100	somatic	0	0.135468497685943	0.104309707074622
6	148297618	148360975	2	neutral	AA	100	somatic	0	3.53216756501905e-06	1.99047654059203e-06
6	151166785	151224108	2	neutral	AA	22.4767	germline	1	0.00866176933927499	0.0251328983481989
6	157312414	157315431	7	gain	AAAABBB	3.37392	germline	1	0.0832726471517971	0.270050907308588
6	162571045	162607249	2	neutral	AA	100	germline	1	0.0324403115294496	0.027497059934266
6	162948170	163111088	2	neutral	AA	61.1207	somatic	0	1.67207786716991e-06	0.000198888596580127
7	905100	908117	4	gain	AAAA	5.54363	germline	1	0.0832778215960587	0.270059894008976
7	5442668	5457753	2	neutral	AA	100	somatic	0	0.416257894453051	0.468346311495656
7	26097050	26106101	1	loss	A	-1	germline	1	0.00471653938318661	0.00822842037210847
7	29635991	29648059	1	loss	A	-1	germline	1	0.00107497651586842	0.00131558290236378
7	50709736	50718787	2	neutral	AA	100	somatic	0	0.0863192685580977	0.065310619869267
7	57485918	57497986	3	gain	AAB	1.55541	germline	1	0.00053294848605335	0.000672200069482209
7	57820805	58062165	2	neutral	AA	0.564955	somatic	0	4.45289858335076e-08	7.07684130973885e-06
7	58062165	58068199	3	gain	AAB	5.37238	germline	1	0.0143173108891377	0.0366570500717747
7	58068199	61045978	2	neutral	AA	-1	somatic	0	3.23866795762894e-11	3.13880366142882e-10
7	61045978	61058046	3	gain	-	-1	germline	1	0.000532804574880295	0.000671929464839627
7	61058046	61963146	2	neutral	AA	2.18658	somatic	0	0.000564763070453006	0.00334858558901063
7	62295016	62358373	3	gain	AAB	0.553163	somatic	0	4.42737028529658e-10	5.06677033662584e-10
7	62400611	62406645	5	gain	-	-1	germline	1	0.0143096105414942	0.0366366723914731
7	62436815	62454917	3	gain	AAB	3.06072	germline	1	2.29935558495558e-05	1.38954884231213e-05
7	62518274	62572580	2	neutral	AA	2.80218	somatic	0	0.299776205273475	0.405417484196595
7	64910755	64937908	2	neutral	AA	9.09465	germline	1	0.791991984190401	0.718526673386134
7	65487002	65490019	3	gain	AAB	25.6443	germline	1	0.0832889105679666	0.270079151959175
7	71689954	71738226	2	neutral	AA	54.5678	somatic	0	0.0230153111177496	0.0155388390432839
7	72754955	72764006	2	neutral	AA	100	germline	1	0.39735149105684	0.616482709935212
7	74100537	74154843	2	neutral	AA	17.8168	somatic	0	9.4649432208105e-08	3.75683398834425e-08
7	74414305	74417322	0	loss	-	-1	germline	1	0.0832674729679841	0.270041920826501
7	79694055	79775514	2	neutral	AA	27.5456	somatic	0	0.0983248332056037	0.251039570368121
7	83377812	83441169	2	neutral	AA	34.4745	somatic	0	0.0669626671461006	0.056314022580718
7	96302640	96347895	2	neutral	AA	37.694	somatic	0	0.503246803999164	0.422593908194723
7	99147671	99398082	2	neutral	AA	100	somatic	0	9.97791184618562e-09	2.92722237782428e-07
7	100951837	100957871	4	gain	AABB	9.67225	germline	1	0.0143104270718064	0.0366391312406574
7	100957871	100960888	14	gain	AAAAAAAAABBBBB	3.33322	germline	1	0.0832682121211547	0.270043204596285
7	100960888	100975973	3	gain	AAB	0.943565	germline	1	0.00010778311254877	9.11607391411717e-05
7	111481167	111574694	2	neutral	AA	100	somatic	0	0.613034486415503	0.623885209451321
7	126201110	126252399	2	neutral	AA	36.3786	somatic	0	0.241421341684033	0.211745569257363
7	127377740	128252670	2	neutral	AA	22.7887	germline	1	0.0285845645645172	0.0187944530617733
7	136519250	136630879	2	neutral	AA	32.3814	somatic	0	0.0156105080397763	0.0623255613453046
7	143847543	143850560	4	gain	AAAB	75.8619	germline	1	0.0832770823737895	0.27005861018127
7	146369755	146405959	2	neutral	AA	27.4262	somatic	0	0.811581694290473	0.843907046369395
7	152358500	152400738	2	neutral	AA	100	somatic	0	0.823548224699645	0.665153309749548
7	152400738	152406772	12	gain	AAAAAAAABBBB	5.33372	germline	1	0.0143072778241999	0.0366335112260957
7	152406772	152409789	6	gain	AAAABB	10.8237	germline	1	0.0832756039451972	0.270056042539222
7	158151140	158154157	5	gain	AAABB	34.3692	germline	1	0.0832763431568356	0.270057326358019
7	158594639	158597656	4	gain	AABB	9.14235	germline	1	0.0832837355655713	0.270070164791008
7	158814880	158974781	2	neutral	AA	100	somatic	0	0.490745493438	0.635020885379972
7	158974781	159273464	2	neutral	AA	12.586	somatic	0	9.31293828727975e-07	4.23233336023232e-05
8	6112442	6115459	0	loss	-	-1	germline	1	0.0832667338201285	0.270040637061164
8	32212509	32257764	2	neutral	AA	100	germline	1	0.93654658033278	0.853009312388292
8	32821943	32834011	0	loss	-	-1	germline	1	0.0143073944520972	0.0366338624549096
8	35570430	35582498	2	neutral	AA	54.5678	germline	1	0.632391829414397	0.797635390195105
8	39374867	39528734	1	loss	A	-1	germline	1	2.71937826504744e-29	0
8	40916554	40922588	0	loss	-	-1	germline	1	0.0143070445709213	0.0366328087773122
8	42325493	42331527	2	neutral	AA	60.359	somatic	0	0.983422227910035	0.817069087885774
8	42331527	42337561	1	loss	A	-1	germline	1	0.0144588388665309	0.0370865679444817
8	43236627	43242661	1	loss	A	-1	somatic	0	0.0229666941668903	0.0509365112424789
8	50118404	50127455	1	loss	A	-1	germline	1	0.00527795139644193	0.00974107341852826
8	82358066	82382202	1	loss	A	-1	germline	1	2.90270493939893e-06	9.68484119012736e-07
8	113381877	113424115	2	neutral	AA	54.8601	somatic	0	0.672837183536053	0.88279394153718
8	114066736	114256807	2	neutral	AA	24.0655	somatic	0	0.0289917608898175	0.0551116651914242
8	116103211	116109245	2	neutral	AA	54.5678	somatic	0	0.255069175745811	0.454076234882867
8	118031074	118043142	2	neutral	AA	54.5686	germline	1	0.397265965607493	0.758055056145953
8	125525302	125564523	2	neutral	AA	54.5678	germline	1	0.245212228354902	0.292411600708028
8	130838239	130841256	1	loss	A	-1	germline	1	0.0833059159812764	0.270108682763022
8	136667083	136851120	1	loss	A	-1	germline	1	3.3676924356578e-36	0
8	139958630	139964664	1	loss	A	-1	germline	1	0.0273025263353484	0.0562777135450584
8	142004156	142016224	2	neutral	AA	12.675	somatic	0	0.0365421333768737	0.0614169392099156
8	143618251	143630319	1	loss	A	-1	germline	1	0.000751837019759094	0.000873697743588031
8	144125107	144128124	5	gain	AAABB	100	germline	1	0.0832756039451972	0.270056042539222
9	902083	905100	2	neutral	AA	100	somatic	0	0.125743663995911	0.337435090151012
9	4332412	4335429	2	neutral	AA	100	somatic	0	0.302746740546326	0.548224812427245
9	6700757	6712825	1	loss	A	-1	germline	1	0.000823765432360311	0.00126690303801524
9	7174426	7195545	2	neutral	AA	83.8879	somatic	0	0.147892494009075	0.115292522931454
9	10242715	10281936	2	neutral	AA	100	somatic	0	0.278793865206187	0.733607154575848
9	11675790	11681824	2	neutral	AA	100	somatic	0	0.729789032402278	0.815370696702975
9	15395751	15398768	2	neutral	AA	100	germline	1	0.142213960427053	0.360910401511349
9	17064152	17112424	1	loss	A	-1	germline	1	4.63514684404598e-11	7.4140693584468e-13
9	19939353	19951421	2	neutral	AA	54.5678	germline	1	0.744808072228976	0.699929157925476
9	20584991	20588008	2	neutral	AA	100	somatic	0	0.271329575603132	0.515892317064463
9	23363648	23378733	1	loss	A	-1	germline	1	0.000383791290965018	0.000284073688228803
9	25988438	25991455	2	neutral	AA	100	somatic	0	0.823808296654764	0.907780351546557
9	30344986	30402309	2	neutral	AA	100	germline	1	0.439213933627092	0.706487323437892
9	33793417	33802468	2	neutral	AA	0.971302	somatic	0	0.00414901355170989	0.00918708735040297
9	40868282	40874316	4	gain	AABB	2.00758	germline	1	0.0143100771252114	0.0366373749050788
9	40910520	40928622	6	gain	AAAABB	1.98605	somatic	0	0.000532221078084553	0.000671118263543269
9	80750005	80810345	2	neutral	AA	38.0658	germline	1	0.549981103424762	0.508905094026332
9	87852023	87861074	2	neutral	AA	100	somatic	0	0.192352749333952	0.252025678402487
9	90510000	90618612	2	neutral	AA	100	somatic	0	0.620542513785068	0.685775671964123
9	98918379	98954583	2	neutral	AA	84.1958	somatic	0	0.282450706707577	0.500317921733944
9	101953481	101962532	1	loss	A	-1	germline	1	0.00475655404026989	0.00749423041245367
9	102291385	102327589	2	neutral	AA	36.3795	germline	1	0.447057331319837	0.899308873909044
9	102372844	102384912	2	neutral	AA	100	somatic	0	0.732886112691332	0.826788583251344
9	103012448	103015465	0	loss	-	-1	germline	1	0.0832903891879217	0.270081719761611
9	103679205	103712392	2	neutral	AA	100	somatic	0	0.337576216180837	0.64979192482354
9	104391217	104400268	2	neutral	AA	100	germline	1	0.169788939864945	0.426535285460994
9	112328944	112398335	2	neutral	AA	100	somatic	0	0.0097780124378895	0.0248982686163854
9	112446607	112546168	2	neutral	AA	92.9055	somatic	0	0.0053786403821063	0.00358773945033286
9	124212907	124227992	2	neutral	AA	62.163	somatic	0	0.2685203344172	0.609819048571028
9	126783391	126786408	2	neutral	AA	100	somatic	0	0.452260189395507	0.682812093942341
9	127552726	127661338	2	neutral	AA	100	somatic	0	1.12355037078257e-06	3.91476874805896e-07
9	128554370	128822883	2	neutral	AA	22.2945	somatic	0	5.68781465307741e-12	1.92058846604226e-09
9	129423266	129441368	3	gain	AAB	0.267789	germline	1	2.26943523365902e-05	1.30810613652166e-05
9	129622388	129625405	2	neutral	AA	100	germline	1	0.215940570930619	0.454440460804426
9	130032700	130035717	2	neutral	AA	100	somatic	0	0.14962264256645	0.371104494902223
9	130268026	130274060	1	loss	A	-1	germline	1	0.0155826603480775	0.0404996339200475
9	131384316	131387333	2	neutral	AA	100	somatic	0	0.618581909373229	0.801753383612842
9	131402418	131405435	2	neutral	AA	100	somatic	0	0.625721205587346	0.806120850698711
9	131842900	131845917	2	neutral	AA	100	somatic	0	0.381626851445796	0.622875931117218
9	132817391	132850578	2	neutral	AA	100	germline	1	0.0269715796738419	0.132960247097101
9	132850578	133037632	2	neutral	AA	36.3787	germline	1	0.190944496937193	0.377473831888927
9	133097972	133257873	2	neutral	AA	100	somatic	0	0.150964522738344	0.18779334949249
9	133511301	133589743	2	neutral	AA	9.08837	germline	1	0.0303669874111515	0.147761392712832
9	134470707	134482775	2	neutral	AA	13.6393	somatic	0	0.856000398512302	0.983387944139654
9	135321501	135327535	1	loss	A	-1	germline	1	0.0206972144962357	0.056403746166643
9	135457266	135466317	2	neutral	AA	100	somatic	0	0.746728797752045	0.913561277093517
9	136772678	136781729	1	loss	A	-1	germline	1	0.00566903189730149	0.00869772939305213
9	137720016	137729067	2	neutral	AA	38.3526	somatic	0	0.311206199182921	0.586914968781036
10	5846946	5852980	1	loss	A	-1	germline	1	0.0204856596064604	0.0557446461131783
10	26935776	26941810	3	gain	-	-1	germline	1	0.014314276982615	0.0366436980579229
10	38484852	38493903	3	gain	-	-1	germline	1	0.00270346323841373	0.00496288993348881
10	38524073	38527090	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
10	38527090	38530107	20	gain	-	-1	germline	1	0.0832674729679841	0.270041920826494
10	38578379	38581396	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
10	39257204	39269272	1	loss	A	-1	germline	1	0.00511255682636505	0.00969209142530447
10	39341680	39353748	1	loss	A	-1	germline	1	0.00102904273384155	0.00135717667622903
10	41857858	41915181	30	gain	AAAAAAAAAAAAAAAAAAAABBBBBBBBBB	9.83143	germline	1	2.2094836240534e-05	1.22908991496695e-05
10	42301357	42322476	3	gain	AAA	14.9011	germline	1	1.09296085568704e-05	6.26100577805211e-05
10	46072607	46096743	2	neutral	AA	48.6702	somatic	0	0.195136646696408	0.655378213775714
10	46516106	46561361	4	gain	AABB	1.8698	germline	1	9.14884749265996e-11	1.3855583347322e-12
10	51258830	51285983	2	neutral	AA	100	somatic	0	0.360825556028937	0.354910882530708
10	55437375	55630463	2	neutral	AA	36.1885	somatic	0	0.628628260936029	0.557896120222435
10	59977960	59983994	2	neutral	AA	100	somatic	0	0.910571941961225	0.99775392444433
10	65082724	65088758	2	neutral	AA	100	somatic	0	0.602032331091904	0.813212974692012
10	65547342	65556393	1	loss	A	-1	germline	1	0.00505576887376216	0.00944897247693965
10	66192980	66223150	2	neutral	AA	100	germline	1	0.0321096532362034	0.0201232683931871
10	67725616	67728633	0	loss	-	-1	germline	1	0.0832822570412997	0.270067597068776
10	76363287	76411559	2	neutral	AA	54.6208	somatic	0	0.535113898099877	0.948905844364307
10	82723123	82741225	2	neutral	AA	100	germline	1	0.842021151820705	0.651727406706395
10	89538526	89556628	2	neutral	AA	27.2839	somatic	0	0.631814876525053	0.883115277719807
10	95693206	95729410	2	neutral	AA	54.5684	germline	1	0.0622448281157692	0.145704874412906
10	121566998	121784222	2	neutral	AA	100	somatic	0	0.015639086316164	0.0699310812619112
10	122538472	122562608	2	neutral	AA	27.816	somatic	0	0.256504946024005	0.45362080108631
10	123672864	123703034	2	neutral	AA	100	somatic	0	0.141275403095694	0.268702050736212
10	128463860	128466877	6	gain	AAABBB	51.2692	germline	1	0.0832748647388742	0.270054758724881
10	128898308	128919427	2	neutral	AA	100	somatic	0	0.0666913369381749	0.154918912810109
10	130838239	130841256	0	loss	-	-1	germline	1	0.0832763431568356	0.270057326358025
10	132361824	132364841	4	gain	AAAA	69.1941	germline	1	0.0832815177871374	0.270066313214333
11	793471	796488	2	neutral	AA	100	somatic	0	0.573034419244862	0.772156332706299
11	1508500	1511517	3	gain	AAB	42.0871	somatic	0	0.0832918678291403	0.270084287581854
11	4519466	4522483	2	neutral	AA	100	somatic	0	0.380586253815997	0.621940552843902
11	4947880	4953914	1	loss	A	-1	germline	1	0.0255972555889589	0.0548145009270733
11	5243546	5246563	2	neutral	AA	100	somatic	0	0.607482251164152	0.794753784145929
11	5762470	5789623	1	loss	A	-1	germline	1	9.02564152217875e-07	2.25802032627342e-07
11	9663451	9702672	2	neutral	AA	31.3337	somatic	0	0.0138083702096399	0.0260993994341793
11	12861471	12888624	2	neutral	AA	42.102	somatic	0	0.917037536226124	0.737523136471448
11	18922624	18940726	3	gain	AAB	2.62713	germline	1	2.21458036070127e-05	1.23153156711409e-05
11	20494481	20542753	2	neutral	AA	100	somatic	0	0.254543249973589	0.116747735941985
11	22853775	22871877	2	neutral	AA	43.9651	somatic	0	0.941407280731703	0.999940264320847
11	24446751	24455802	2	neutral	AA	54.5678	somatic	0	0.974153469858957	0.931735749310198
11	27101711	27113779	2	neutral	AA	100	somatic	0	0.0972402316673362	0.243483063454326
11	29219645	29246798	2	neutral	AA	36.3786	somatic	0	0.0193036452563887	0.0677244549043403
11	35890232	35911351	2	neutral	AA	100	somatic	0	0.232996583213687	0.680956471408914
11	37742670	37745687	1	loss	A	-1	germline	1	0.0833273615979852	0.270145920614006
11	38898181	38904215	2	neutral	AA	100	somatic	0	0.355943649077427	0.803883823686727
11	39764060	39788196	2	neutral	AA	36.4214	somatic	0	0.131560223508117	0.185423818124261
11	39875689	39926978	2	neutral	AA	100	somatic	0	0.908154508003029	0.989579579296205
11	42793128	42796145	1	loss	A	-1	germline	1	0.0851711634916921	0.273333906592066
11	44286543	44289560	2	neutral	AA	100	somatic	0	0.875700245508573	0.927614465172188
11	44455495	44470580	2	neutral	AA	100	somatic	0	0.55406068459965	0.319251010473119
11	44530920	44533937	2	neutral	AA	100	somatic	0	0.257266064127165	0.500852165815667
11	46425596	46470851	2	neutral	AA	36.441	somatic	0	0.505130316645867	0.804629210497706
11	46938486	46944520	2	neutral	AA	100	somatic	0	0.106869403345802	0.18301285633653
11	48169422	48172439	2	neutral	AA	100	somatic	0	0.540069037515353	0.749319225798405
11	50175727	50178744	1	loss	A	-1	germline	1	0.0833214451191743	0.270135647729153
11	54755533	54776652	1	loss	A	-1	germline	1	8.9961461340021e-05	4.20594362877669e-05
11	55183947	55217134	1	loss	A	-1	germline	1	3.45361598845374e-06	1.25985833832054e-06
11	55600293	55684769	1	loss	A	-1	germline	1	1.41187081739791e-16	0
11	58689701	58716854	2	neutral	AA	36.3917	somatic	0	0.670957820441222	0.551263336573254
11	60279660	60336983	2	neutral	AA	93.3681	somatic	0	0.747346087159518	0.437157626260733
11	61887721	61890738	2	neutral	AA	100	somatic	0	0.424485474991793	0.659951890750859
11	64440103	64452171	2	neutral	AA	54.5678	somatic	0	0.368840420642255	0.28038427486139
11	67647174	67779922	2	neutral	AA	4.34209	somatic	0	0.775702527881659	0.918635098279566
11	69731921	69737955	2	neutral	AA	25.6025	somatic	0	0.422897333364733	0.343784788349766
11	70060774	70063791	2	neutral	AA	100	somatic	0	0.498996713631347	0.719273762816331
11	72896754	72932958	2	neutral	AA	100	somatic	0	0.00427746043242269	0.0065748647857401
11	73068723	73080791	2	neutral	AA	100	germline	1	0.122898532129978	0.076804329518998
11	73596698	73795820	2	neutral	AA	18.405	somatic	0	1.74400260076805e-10	2.45872244786227e-09
11	77177877	77195979	2	neutral	AA	15.4844	somatic	0	0.0113508232328636	0.0478921725190516
11	79238488	79268658	2	neutral	AA	100	somatic	0	0.524299570973147	0.776737276477673
11	82143859	82152910	1	loss	A	-1	germline	1	0.015427863804868	0.0400217217605897
11	84216538	84228606	2	neutral	AA	54.5678	germline	1	0.192869359660916	0.275491953232577
11	88633426	88717902	2	neutral	AA	100	somatic	0	0.0070658011411859	0.028275918066905
11	91478457	91490525	2	neutral	AA	59.0824	somatic	0	0.245270242884345	0.295025195858424
11	93774394	93813615	2	neutral	AA	36.3786	somatic	0	0.323463104535084	0.72240167641935
11	96562102	96565119	0	loss	-	-1	germline	1	0.0832667338201285	0.270040637061164
11	100659188	100810038	2	neutral	AA	100	germline	1	0.532560650657183	0.573119525889415
11	103422760	103425777	2	neutral	AA	100	somatic	0	0.970099666682698	0.956605861898275
11	105537677	105540694	2	neutral	AA	100	somatic	0	0.407153834198809	0.645265577999258
11	105963074	105972125	2	neutral	AA	54.5678	germline	1	0.678395343564869	0.863289883825808
11	106195383	106201417	2	neutral	AA	55.0239	somatic	0	0.436593124134346	0.868518525416874
11	107824563	107839648	2	neutral	AA	100	germline	1	0.568584932799362	0.749776294124775
11	110057143	110096364	2	neutral	AA	100	somatic	0	0.707698312326331	0.81355168551421
11	111360487	111381606	2	neutral	AA	38.0614	somatic	0	0.759086641338108	0.98279532876403
11	112277655	112280672	2	neutral	AA	100	somatic	0	0.390780581713518	0.630974109515516
11	112844851	112893123	2	neutral	AA	36.5158	somatic	0	0.312909625342914	0.500786539777745
11	115373097	115376114	2	neutral	AA	100	somatic	0	0.834228757669226	0.911990668007667
11	116815223	116935903	2	neutral	AA	60.3939	germline	1	0.341122232331651	0.582620915631509
11	121714831	121781205	2	neutral	AA	22.6153	somatic	0	0.405863289875643	0.0745568085479947
11	128150092	128174228	2	neutral	AA	49.3598	somatic	0	0.834801445025329	0.880904725248971
11	132042022	132045039	2	neutral	AA	22.3415	somatic	0	0.55882803501576	0.762435895125281
11	132238127	132244161	2	neutral	AA	100	somatic	0	0.0215890092192945	0.0530916026356334
12	2253699	2256716	5	gain	AAAAA	13.4281	germline	1	0.0832763431568356	0.270057326358019
12	8640688	8643705	2	neutral	AA	100	somatic	0	0.190017861137851	0.423362106941541
12	9183748	9195816	2	neutral	AA	100	somatic	0	0.4491317401044	0.550903869815942
12	9482431	9509584	1	loss	A	-1	germline	1	0.00367428845515914	0.00611083641001819
12	25107474	25201001	2	neutral	AA	100	somatic	0	0.195252200513472	0.39337737174255
12	31349647	31355681	2	neutral	AA	100	somatic	0	0.221340097022136	0.435834104542187
12	31355681	31470327	2	neutral	AA	40.5317	somatic	0	0.000409578374521033	0.00163498900453274
12	32140101	32212509	2	neutral	AA	36.4144	somatic	0	0.115421591003178	0.348044963441429
12	34451123	34457157	2	neutral	AA	54.6088	somatic	0	0.274908968677165	0.368003151576252
12	34677398	37754738	2	neutral	AA	0.64635	germline	1	2.00259000156118e-05	0.00196217409545985
12	37971962	37977996	2	neutral	AA	7.02414	somatic	0	0.370311916120731	0.485584929880391
12	38258577	38346070	2	neutral	AA	27.284	somatic	0	0.0645642172349486	0.0564676806076818
12	39709754	39715788	1	loss	A	-1	germline	1	0.0161832647487442	0.041080232225396
12	43665041	43671075	2	neutral	AA	19.4976	somatic	0	0.251537423825746	0.550530342653084
12	45203711	45230864	2	neutral	AA	54.5678	somatic	0	0.304835344169331	0.614223997575712
12	55711922	55766228	2	neutral	AA	100	somatic	0	0.142707256855769	0.125991364498451
12	55766228	55935180	2	neutral	AA	51.5409	somatic	0	6.25838670175027e-07	4.27679894743349e-06
12	60113725	60122776	2	neutral	AA	100	somatic	0	0.068565364420108	0.0914244174196829
12	60234405	60258541	2	neutral	AA	100	somatic	0	0.781066959102161	0.466346771316747
12	61027876	61100284	2	neutral	AA	35.9606	somatic	0	0.144436345490781	0.457676053398505
12	63103572	63139776	2	neutral	AA	31.111	somatic	0	0.0344663138999224	0.178065135910136
12	67668293	67677344	2	neutral	AA	54.5678	somatic	0	0.455924424000477	0.63227314440561
12	69152657	69164725	2	neutral	AA	8.43313	somatic	0	0.123156980532372	0.215596676186248
12	70468069	70492205	2	neutral	AA	100	germline	1	0.481550193144188	0.673467747453193
12	70857262	70950789	2	neutral	AA	100	somatic	0	0.251395040851572	0.244517208627961
12	75563782	75578867	2	neutral	AA	54.5679	germline	1	0.972340159736958	0.556172345230421
12	91264250	91339675	2	neutral	AA	100	somatic	0	0.0198663118946721	0.0286064476393761
12	91677579	91749987	2	neutral	AA	27.3947	somatic	0	0.00305700561852564	0.00307114925165919
12	91964194	91979279	2	neutral	AA	27.2872	somatic	0	0.454293993499668	0.484398822225443
12	94012737	94036873	2	neutral	AA	36.3915	somatic	0	0.896883146574625	0.993412799142671
12	99265334	99283436	2	neutral	AA	100	somatic	0	0.445195038005286	0.584621908565754
12	100969939	100975973	2	neutral	AA	54.5873	somatic	0	0.101401906388154	0.208469605080732
12	101974600	101995719	2	neutral	AA	100	somatic	0	0.971188502130066	0.703788109804432
12	107999549	108026702	2	neutral	AA	54.5688	somatic	0	0.410234460781648	0.73727361024323
12	115834698	115840732	2	neutral	AA	100	somatic	0	0.483900099220697	0.7303836729744
12	126798476	126834680	2	neutral	AA	17.2979	somatic	0	0.697773538064139	0.49048412406222
12	127371706	127377740	2	neutral	AA	100	somatic	0	0.460860440900371	0.470537869289818
12	129302586	129311637	2	neutral	AA	54.5679	somatic	0	0.12226092785137	0.397727842872583
12	130077955	130080972	2	neutral	AA	97.3243	somatic	0	0.568697108836695	0.769168703596313
12	132238127	132268297	2	neutral	AA	20.2555	somatic	0	0.0527793409725231	0.0464862584756033
13	19993659	20069084	2	neutral	AA	100	somatic	0	0.659556964676187	0.928576811807909
13	21671111	21710332	2	neutral	AA	36.6105	somatic	0	0.0662857044634307	0.110203610120392
13	22021083	22024100	0	loss	-	-1	germline	1	0.0832741255378665	0.270053474915002
13	23058931	23064965	1	loss	A	-1	germline	1	0.0208614300088077	0.0568881782053209
13	31959081	31965115	1	loss	A	-1	germline	1	0.0217599575134983	0.0551327358722538
13	33724026	33730060	2	neutral	AA	100	somatic	0	0.44761781312374	0.499206730775925
13	37498293	37510361	1	loss	A	-1	germline	1	0.0010819195999199	0.0014114198591535
13	39055065	39157643	2	neutral	AA	27.2839	somatic	0	0.00376340686500838	0.00938670665344898
13	42726754	42784077	2	neutral	AA	100	germline	1	0.257610999190972	0.33614578308661
13	45420935	45426969	1	loss	A	-1	somatic	0	0.0213035512080069	0.0578698643499508
13	48956859	48962893	1	loss	A	-1	germline	1	0.0236160596715098	0.0642005683628247
13	49352086	49376222	2	neutral	AA	100	somatic	0	0.677878801817232	0.894612787121961
13	50495529	50501563	1	loss	A	-1	germline	1	0.023847513845374	0.0515548707766161
13	58041046	58179828	2	neutral	AA	63.3	somatic	0	0.427764790189227	0.561087016786379
13	59582733	59612903	2	neutral	AA	43.3241	somatic	0	0.50763822204598	0.841319529995815
13	61302423	61317508	2	neutral	AA	100	somatic	0	0.131466585891849	0.138214694091744
13	63028147	63043232	3	gain	AAB	1.05516	germline	1	0.00053294848605335	0.000672238735627384
13	63043232	63058317	3	gain	AAB	3.49917	germline	1	0.00142707266972456	0.00636682532395383
13	63058317	63067368	3	gain	AAB	0.62786	germline	1	0.00270167690462847	0.00496010726983032
13	63649649	63664734	1	loss	A	-1	germline	1	0.000327295437907176	0.000272244316353198
13	66530884	66564071	2	neutral	AA	94.3025	somatic	0	0.412618389553061	0.765501608798437
13	68277727	68301863	2	neutral	AA	100	germline	1	0.834045757927118	0.976480780671653
13	68558308	68606580	2	neutral	AA	100	somatic	0	0.838136566406429	0.846951992713176
13	68950518	68971637	2	neutral	AA	100	somatic	0	0.810957508378304	0.572878338845012
13	74335863	74356982	2	neutral	AA	100	germline	1	0.16019809109799	0.240738005919589
13	77512764	77539917	2	neutral	AA	100	somatic	0	0.816869069100798	0.823680761716632
13	79926364	79968602	2	neutral	AA	54.5678	somatic	0	0.425078930381584	0.175218176226055
13	80134537	81051705	2	neutral	AA	100	somatic	0	0.195614735202731	0.174600594285792
13	84415660	84433762	2	neutral	AA	100	somatic	0	0.410849951427699	0.196002080969707
13	86753835	86780988	2	neutral	AA	100	somatic	0	0.423615732149307	0.81823877956854
13	89873413	89942804	2	neutral	AA	21.1017	somatic	0	0.5146088070679	0.613276773942063
13	105036855	105076076	2	neutral	AA	100	somatic	0	0.349853916095412	0.680493255302479
13	106189349	106246672	2	neutral	AA	100	somatic	0	0.13372270902454	0.0847112290036298
13	107019024	107064279	2	neutral	AA	54.5681	somatic	0	0.0111956983163899	0.0696496761334198
13	111610898	111668221	2	neutral	AA	4.67924	somatic	0	0.0775391259088545	0.202146811234709
13	111972938	111978972	2	neutral	AA	100	somatic	0	0.632568730025747	0.861725937713744
13	114154229	114157246	1	loss	A	-1	somatic	0	0.0847481903420394	0.272604150918752
14	0	16092678	3	gain	AAB	-1	somatic	0	NA	NA
14	16092678	16095695	0	loss	-	-1	somatic	0	0.0832903891879217	0.270081719761611
14	16095695	19749282	3	gain	AAB	-1	somatic	0	0.507325487636549	0.756381127609596
14	19749282	19954438	3	gain	AAB	0.504166	germline	1	6.49302544698411e-26	0
14	19954438	19957455	3	gain	AAB	9.36375	germline	1	0.083294085830838	0.270088139345641
14	23852402	23858436	2	neutral	AA	100	somatic	0	0.195132763944122	0.251369928358191
14	26498311	26531498	2	neutral	AA	100	somatic	0	0.890717040150718	0.657841309462549
14	38334002	38370206	2	neutral	AA	57.6049	somatic	0	0.0152912713571543	0.0243774886805801
14	49563276	49575344	2	neutral	AA	100	germline	1	0.21655053489724	0.273387653166819
14	57380323	57434629	2	neutral	AA	21.8871	somatic	0	0.0419722234128303	0.202243441932007
14	57579445	57591513	2	neutral	AA	100	somatic	0	0.59671634742204	0.809280084303521
14	59483172	59784872	2	neutral	AA	100	somatic	0	0.0131530910796932	0.0716826913276108
14	64406916	64693531	2	neutral	AA	21.9035	somatic	0	3.89100814290908e-05	0.000229802894245235
14	64693531	64871534	2	neutral	AA	15.594	somatic	0	4.5832413528445e-05	0.000275829886472234
14	79639749	79642766	0	loss	-	-1	germline	1	0.0832659946775881	0.270039353300283
14	82050332	82711055	2	neutral	AA	100	somatic	0	3.00851587435202e-10	2.49255661644021e-06
14	85752191	85900024	2	neutral	AA	100	somatic	0	0.0135075923142598	0.0260023246065297
14	90356133	90392337	2	neutral	AA	100	somatic	0	0.0326855344245151	0.0277885536407581
14	94682511	94688545	3	gain	AAB	23.6623	germline	1	0.0143190614778338	0.0366549415761155
14	99926057	99929074	7	gain	AAAABBB	21.945	germline	1	0.0832733863421741	0.270052191109564
15	0	17079237	6	gain	-	-1	somatic	0	NA	NA
15	17079237	17082254	13	gain	-	-1	germline	1	0.0832689512796405	0.270044488370532
15	17082254	20340614	6	gain	-	-1	somatic	0	0.0233074509907644	0.130929646696286
15	20340614	20343631	17	gain	-	-1	germline	1	0.0832682121211547	0.270043204596285
15	20343631	20669467	6	gain	-	-1	germline	1	4.27096953548879e-12	2.54241072639161e-14
15	20669467	20672484	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
15	22226239	22250375	3	gain	AAB	4.87247	germline	1	0.00053317059148645	0.000672251624805775
15	27306867	27309884	1	loss	A	-1	germline	1	0.0833118315668658	0.270118954899403
15	34626109	34656279	2	neutral	AA	63.6801	germline	1	0.86817548469553	0.897513424578773
15	35507073	35534226	2	neutral	AA	28.5355	somatic	0	0.620405972466364	0.400652296972554
15	38297798	38306849	2	neutral	AA	100	somatic	0	0.228325908366161	0.433475759772712
15	39076184	39085235	2	neutral	AA	100	somatic	0	0.429940907029914	0.618284843336385
15	39344697	39374867	2	neutral	AA	100	somatic	0	0.498204849623894	0.166439352427129
15	41142829	41429444	2	neutral	AA	52.4205	somatic	0	1.26688477504103e-21	0
15	45433003	45466190	2	neutral	AA	54.5678	somatic	0	0.151895128749863	0.275780318517033
15	46561361	46567395	2	neutral	AA	100	somatic	0	0.275907184218574	0.292921516343839
15	47563005	47596192	2	neutral	AA	100	somatic	0	0.105977511544135	0.357388111056818
15	52218236	52302712	2	neutral	AA	43.0562	somatic	0	0.760499065064403	0.945255145361452
15	53512529	53533648	2	neutral	AA	100	germline	1	0.854240020684099	0.923809093981149
15	55117573	55135675	2	neutral	AA	100	germline	1	0.123122817392963	0.125819720124294
15	63188048	63320796	2	neutral	AA	100	somatic	0	0.000399134769842788	0.000988187590220235
15	64762922	64781024	2	neutral	AA	100	somatic	0	0.0669039919736141	0.0677913573170629
15	67212726	67224794	2	neutral	AA	100	somatic	0	0.449558468321409	0.421246643711368
15	67731650	67843279	2	neutral	AA	100	somatic	0	0.180144853331519	0.252470592652876
15	68811736	68847940	2	neutral	AA	100	somatic	0	0.000514406745946348	0.000415619727210381
15	72441187	72474374	2	neutral	AA	100	somatic	0	0.00681892247159329	0.0167813891939103
15	76514137	76520171	2	neutral	AA	100	somatic	0	0.42259413201721	0.797327375084546
15	77714903	77720937	1	loss	A	-1	somatic	0	0.0274037629886428	0.0578792633392834
15	83779073	83788124	2	neutral	AA	100	somatic	0	0.323147553062424	0.384693777836109
15	91261233	91279335	2	neutral	AA	27.7535	somatic	0	0.876560235867121	0.744235601004242
15	94009720	94054975	2	neutral	AA	6.7985	germline	1	0.379229686839155	0.0873008923143826
15	100242842	100245859	2	neutral	AA	100	somatic	0	0.262496991953704	0.506495948179684
16	1022763	1025780	5	gain	AAABB	4.08999	germline	1	0.0832756039451972	0.270056042539222
16	9259173	9283309	2	neutral	AA	36.523	somatic	0	0.659072068542467	0.684911526731956
16	10858183	10873268	2	neutral	AA	100	somatic	0	0.11970590574647	0.43158811705561
16	11974473	11983524	2	neutral	AA	100	germline	1	0.166323873485283	0.435809146515079
16	19833758	19845826	2	neutral	AA	100	somatic	0	0.887186506098504	0.981371770788804
16	21559482	21583618	4	gain	AABB	3.79554	germline	1	9.65038628485491e-07	2.25415875410029e-07
16	21692230	21716366	2	neutral	AA	54.5777	germline	1	0.0105645143194995	0.0437902947401088
16	22615432	22699908	4	gain	AABB	1.4376	germline	1	1.03640182223078e-18	0
16	25327715	25333749	1	loss	A	-1	germline	1	0.0168277825590489	0.044297607918007
16	34061930	34064947	28	gain	AAAAAAAAAAAAAAAAAABBBBBBBBBB	11.6982	germline	1	0.0832667338201285	0.270040637061158
16	34083049	34086066	15	gain	AAAAAAAAAABBBBB	100	germline	1	0.0832682121211547	0.270043204596285
16	34095117	34101151	7	gain	AAAAABB	1.8887	germline	1	0.0143085607771964	0.0366366723914731
16	34101151	34161491	2	neutral	AA	3.01139	germline	1	0.0845035354907922	0.405003367367272
16	34161491	34191661	2	neutral	AA	-1	somatic	0	0.0143112436432187	0.0366415902342263
16	34191661	34212780	3	gain	AAB	0.952034	germline	1	0.00359200224458229	0.0222904415184561
16	34212780	34218814	2	neutral	AA	-1	germline	1	NA	NA
16	34258035	34595939	2	neutral	AA	-1	somatic	0	NA	NA
16	34595939	34598956	4	gain	-	-1	germline	1	0.0832837355655713	0.270070164791008
16	34598956	34957979	2	neutral	AA	0.890216	germline	1	3.06219001575447e-19	2.77555756156289e-15
16	35232526	35522158	3	gain	AAB	4.38251	germline	1	5.47238517647217e-60	0
16	36122541	36125558	4	gain	-	-1	germline	1	0.0832770823737895	0.27005861018127
16	46401460	46404477	14	gain	AAAAAAAAAAAAAA	3.74563	germline	1	0.0832682121211547	0.270043204596285
16	46404477	46467834	2	neutral	AA	0.551316	somatic	0	1.19559316090415e-05	6.99694205907875e-06
16	53376764	53437104	2	neutral	AA	100	germline	1	0.477859667597168	0.385491920869646
16	55766228	55787347	1	loss	A	-1	germline	1	0.00130414705597981	0.00143131969103016
16	58753058	58807364	2	neutral	AA	100	somatic	0	0.247562165627043	0.420783282549154
16	70151284	70163352	3	gain	AAB	3.14831	germline	1	0.000533405129678537	0.000673412600065038
16	71276625	71303778	2	neutral	AA	55.071	somatic	0	0.557870253985718	0.767746125511003
16	77198996	77208047	2	neutral	AA	61.8081	somatic	0	0.6485958292573	0.387330052105995
16	78336405	78351490	1	loss	A	-1	germline	1	0.00028552298128855	0.000267772502499541
16	82840786	82880007	2	neutral	AA	36.384	somatic	0	0.46307431896139	0.337773997215193
16	86334472	86373693	2	neutral	AA	98.6484	somatic	0	0.606835805567282	0.638885636895385
16	89040721	89052789	2	neutral	AA	19.7576	somatic	0	0.463864471022993	0.574850850909171
17	404278	663740	2	neutral	AA	23.9028	somatic	0	0.0204974405079591	0.0101277694029271
17	14569093	14578144	2	neutral	AA	100	somatic	0	0.168218244784891	0.334360487529342
17	21290969	21303037	4	gain	AABB	0.235141	germline	1	0.000532385383109229	0.000671272707255643
17	21855148	21858165	6	gain	-	-1	germline	1	0.0832756039451972	0.270056042539222
17	21858165	21885318	3	gain	-	-1	germline	1	2.15853232018441e-07	4.1099080139162e-08
17	21885318	21966777	1	loss	A	-1	somatic	0	1.99516314423248e-09	3.34867689133489e-11
17	21966777	21990913	12	gain	-	-1	germline	1	0.000532122517751319	0.00067107965782065
17	22123661	22159865	5	gain	AAABB	0.377317	germline	1	1.97627235254618e-09	7.55939755237023e-11
17	26781909	26824147	3	gain	-	-1	somatic	0	3.32302275611775e-09	1.97179950145454e-09
17	26824147	26827164	4	gain	-	-1	germline	1	0.0832778215960587	0.270059894008976
17	26827164	26866385	3	gain	-	-1	germline	1	5.65144049073446e-08	1.00222923293813e-08
17	26866385	26869402	6	gain	-	-1	germline	1	0.0832733863421741	0.270052191109564
17	26869402	26878453	3	gain	-	-1	germline	1	0.00277531744935677	0.00519488216515518
17	26935776	26938793	15	gain	AAAAAAAAAABBBBB	8.73373	germline	1	0.0832682121211547	0.270043204596285
17	42409969	42500479	2	neutral	AA	37.3815	somatic	0	1.2503533542382e-06	1.97816416982466e-05
17	48009521	48199592	2	neutral	AA	100	somatic	0	3.19471111668244e-05	3.25078487123376e-05
17	62352339	62807906	2	neutral	AA	56.9237	somatic	0	0.000519889770955304	0.000155021332490679
17	75228895	75548697	2	neutral	AA	100	somatic	0	5.93041646679465e-11	4.00256494614837e-11
17	81410728	81425813	2	neutral	AA	17.1114	germline	1	0.812139021647964	0.952416891921338
17	83103265	83193775	2	neutral	AA	47.0088	somatic	0	0.000515931019334633	0.000681112315858212
18	1324463	1390837	2	neutral	AA	15.5966	somatic	0	0.0516157933659674	0.108056258207323
18	6501635	6540856	2	neutral	AA	15.5926	somatic	0	0.0836187389320742	0.206085488672163
18	7144256	7147273	3	gain	AAB	12.0069	somatic	0	0.0833081342859985	0.270112534780745
18	8960490	8966524	2	neutral	AA	21.8303	somatic	0	0.471317921911465	0.382329065706842
18	12083085	12092136	2	neutral	AA	2.23841	somatic	0	0.292330374167644	0.745678568530609
18	22211154	22337868	2	neutral	AA	12.1577	somatic	0	0.408120988579351	0.381058379170919
18	24479938	24549329	2	neutral	AA	44.1542	somatic	0	0.78542530954149	0.286761047548473
18	33280527	33286561	2	neutral	AA	100	germline	1	0.368623952034874	0.544050665085365
18	34375698	34381732	2	neutral	AA	54.5693	germline	1	0.954730807015024	0.979849907074524
18	36164779	36170813	2	neutral	AA	100	somatic	0	0.115748873529456	0.154313518432231
18	39676567	39685618	2	neutral	AA	54.8373	somatic	0	0.445112224486173	0.905724892795694
18	40681228	40687262	1	loss	A	-1	germline	1	0.0184012615841751	0.0471615072952376
18	46241559	46247593	2	neutral	AA	36.3811	somatic	0	0.946159289199033	0.798890900817098
18	49252525	49258559	2	neutral	AA	100	somatic	0	0.8926493405647	0.977148476845725
18	50245118	50272271	2	neutral	AA	73.9933	somatic	0	0.650638735141342	0.777222994588127
18	51195473	51246762	2	neutral	AA	36.3791	somatic	0	0.148550224129164	0.150082487270467
18	52697939	52710007	2	neutral	AA	100	somatic	0	0.799022243695244	0.414393405069627
18	63725074	63791448	2	neutral	AA	46.5803	somatic	0	0.878875517671383	0.880895403211585
18	66057215	66066266	1	loss	A	-1	germline	1	0.00657978414417676	0.00957424864591705
18	69056113	69089300	2	neutral	AA	57.245	somatic	0	0.127248150369739	0.149538632851477
18	69602190	69617275	2	neutral	AA	36.3786	somatic	0	0.722176467077561	0.888692814443164
18	69915958	69921992	2	neutral	AA	100	somatic	0	0.0623657850080659	0.110856311833089
18	74616444	74619461	3	gain	-	-1	germline	1	0.0833044371380438	0.270106114773473
18	77446390	77509747	2	neutral	AA	19.3474	somatic	0	0.561835535087829	0.450020100775169
18	79199267	79202284	5	gain	AAABB	16.3607	germline	1	0.0832763431568356	0.270057326358019
19	1399888	1427041	2	neutral	AA	14.3574	somatic	0	0.196827149829443	0.209007200440938
19	2959677	2971745	2	neutral	AA	56.5263	somatic	0	0.00710015982609478	0.00581093355724804
19	3472567	3481618	2	neutral	AA	54.5679	somatic	0	0.097008373579122	0.261821122340134
19	7448973	7451990	6	gain	AAAABB	6.96636	germline	1	0.0832748647388742	0.270054758724881
19	8882048	8918252	2	neutral	AA	1.7425	somatic	0	0.0104340095291282	0.00723349133535234
19	9413040	9434159	2	neutral	AA	100	germline	1	0.0655187725488492	0.215735773641636
19	10550449	10610789	2	neutral	AA	13.6863	somatic	0	0.000702153157003472	0.0036959645312501
19	10710350	10716384	2	neutral	AA	36.3786	somatic	0	0.196031921061567	0.201711468438571
19	11530974	11555110	2	neutral	AA	36.4387	somatic	0	0.00432828052774998	0.00636423442572398
19	12246003	12363666	2	neutral	AA	27.2839	germline	1	1.13318653104983e-06	5.88718987404313e-06
19	13208426	13217477	2	neutral	AA	36.5728	somatic	0	0.0759203005624527	0.260172715564885
19	14934150	14940184	1	loss	A	-1	germline	1	0.0186097613424073	0.0497932484866881
19	16466786	16484888	2	neutral	AA	36.5472	somatic	0	0.0519826956778622	0.124714313385016
19	19900132	19954438	2	neutral	AA	8.39509	germline	1	0.807546466343141	0.93574621862841
19	21049609	21565516	2	neutral	AA	1.4298	germline	1	2.48427880844617e-05	4.56808576865253e-06
19	21568533	21574567	3	gain	AAB	15.309	germline	1	0.0143156771766872	0.0366500221655568
19	23173577	23267104	2	neutral	AA	32.2772	germline	1	0.0071618445113002	0.0321454030152794
19	23297274	23303308	2	neutral	AA	49.4907	somatic	0	0.695992523591843	0.71321638454898
19	24329088	24404513	4	gain	AABB	0.24179	germline	1	4.52997199624327e-16	0
19	27243510	27249544	2	neutral	AA	29.5209	somatic	0	0.0452206600504244	0.125787474186655
19	27337037	27340054	4	gain	AAAB	69.5352	germline	1	0.0832778215960587	0.270059894008976
19	27340054	27346088	3	gain	AAB	8.03806	germline	1	0.0147181952406866	0.0376289308384354
19	27346088	27379275	6	gain	AAAABB	0.155588	somatic	0	2.03678100221494e-07	3.04842816545303e-08
19	27379275	27382292	3	gain	AAB	4.49772	germline	1	0.0833325387960953	0.270154909622146
19	27382292	27400394	6	gain	AAAABB	1.18936	germline	1	2.21078598823131e-05	1.22972642007113e-05
19	34390783	34393800	6	gain	AAAABB	7.23434	germline	1	0.0832756039451972	0.270056042539222
19	35181237	35196322	2	neutral	AA	100	germline	1	0.0453320466027208	0.133540671521601
19	36348816	36354850	1	loss	A	-1	somatic	0	0.0225772084812206	0.048398999419298
19	37990064	37999115	2	neutral	AA	100	somatic	0	0.269683379133038	0.277525030704142
19	39857587	39860604	2	neutral	AA	100	somatic	0	0.223543522504252	0.463261543522518
19	44938215	44968385	2	neutral	AA	100	somatic	0	0.0498413736470458	0.0777923001419133
19	45752805	45779958	2	neutral	AA	54.5678	germline	1	0.35117696005384	0.609988325198076
19	46286814	46320001	2	neutral	AA	24.2916	somatic	0	0.0307058969151819	0.0608719095672038
19	48453020	48480173	2	neutral	AA	54.5678	somatic	0	0.726570247085343	0.774658896304393
19	50902824	50905841	1	loss	A	-1	somatic	0	0.0833406749195457	0.270169035647454
19	51632938	51645006	1	loss	A	-1	germline	1	0.00118872891632721	0.00151149811180262
19	53053945	53056962	2	neutral	AA	100	somatic	0	0.27959022287457	0.524573601644357
19	53868535	53883620	2	neutral	AA	12.9393	somatic	0	0.175088613141749	0.262291369419751
19	56098098	56122234	2	neutral	AA	19.6142	somatic	0	0.504782298193468	0.458914744342718
19	58345763	58351797	2	neutral	AA	38.6	somatic	0	0.465975023284424	0.494884680871297
20	60340	63357	7	gain	-	-1	germline	1	0.0832719079667353	0.270049623512067
20	66374	69391	3	gain	-	-1	germline	1	0.0833014795153749	0.270100978847847
20	1611078	1614095	0	loss	-	-1	germline	1	0.0832926071577236	0.270085571498668
20	22081423	22084440	1	loss	A	-1	germline	1	0.0833236637588505	0.270139500027559
20	28782180	28788214	7	gain	-	-1	germline	1	0.0143086774143191	0.0366352673996192
20	28803299	28872690	8	gain	-	-1	germline	1	4.59536829827051e-06	1.66386684175013e-06
20	28872690	29376529	3	gain	-	-1	somatic	0	5.00382142403684e-12	2.44471110022459e-13
20	29889419	29895453	4	gain	-	-1	germline	1	0.0143104270718064	0.0366391312406574
20	31066049	31075100	38	gain	-	-1	germline	1	0.0143065780744276	0.0366321063403103
20	31165610	31168627	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
20	31183712	31189746	16	gain	-	-1	germline	1	0.0143071611971413	0.0366338624549077
20	31189746	31241035	3	gain	-	-1	somatic	0	2.72290260561409e-05	2.53226618084357e-05
20	31241035	31244052	50	gain	-	-1	germline	1	0.0832667338201285	0.270040637061158
20	31452225	31464293	1	loss	A	-1	germline	1	0.000963684339854954	0.00149803731841647
20	36937131	36940148	2	neutral	AA	100	germline	1	0.133030934181966	0.347964687155956
20	38225390	38228407	2	neutral	AA	100	somatic	0	0.138043296572399	0.355091727509934
20	43465919	43477987	2	neutral	AA	54.5777	somatic	0	0.984523120299347	0.958240957072791
20	45363612	45426969	2	neutral	AA	27.4659	somatic	0	0.211467931836968	0.152581704695376
20	51222626	51249779	2	neutral	AA	100	somatic	0	0.826297136592165	0.952026458098197
20	51542428	51560530	2	neutral	AA	100	somatic	0	0.60461557373464	0.853609401256869
20	51774737	51777754	2	neutral	AA	100	somatic	0	0.653957180465647	0.82313779409152
20	55117573	55135675	2	neutral	AA	54.7367	somatic	0	0.29579903735673	0.376773925305568
20	55171879	55186964	2	neutral	AA	100	somatic	0	0.842811513443217	0.854717977005827
20	56276101	56285152	2	neutral	AA	100	somatic	0	0.339239874321912	0.806258815473908
20	56692447	56716583	2	neutral	AA	65.3815	somatic	0	0.0986434524135333	0.160543678439735
20	59679277	59724532	2	neutral	AA	100	somatic	0	0.0133154874712155	0.0248602467744694
20	60481799	60527054	2	neutral	AA	10.9549	somatic	0	0.273871731332355	0.486528546930493
20	60732210	60738244	2	neutral	AA	54.5689	somatic	0	0.45191485229339	0.597798866237424
20	62104945	62153217	2	neutral	AA	32.3637	somatic	0	0.720593166321354	0.854898919742537
20	62684209	62693260	2	neutral	AA	36.3963	somatic	0	0.521012000933063	0.294112109833484
21	0	10692248	6	gain	AAAABB	-1	somatic	0	4.52224443988954e-16	0
21	10692248	10695265	48	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBB	100	germline	1	0.0832667338201285	0.270040637061158
21	10695265	10755605	6	gain	AAAABB	0.469585	somatic	0	1.97372611894911e-11	1.87405646556726e-13
21	14584178	14587195	2	neutral	AA	100	germline	1	0.519820660984664	0.734746903963216
21	18135187	18159323	2	neutral	AA	54.6202	somatic	0	0.790435477009622	0.840790505883381
21	21200459	21206493	2	neutral	AA	100	somatic	0	0.912151391149481	0.651196769324929
21	22760248	22787401	2	neutral	AA	36.3856	somatic	0	0.266547847616326	0.312568020574425
21	23635178	23665348	2	neutral	AA	100	somatic	0	0.847131561671639	0.976020618263224
21	28338681	28399021	2	neutral	AA	100	somatic	0	0.265301317325898	0.462071202944214
21	31784095	31787112	3	gain	AAB	10.6772	germline	1	0.0832911285058731	0.270083003669501
21	32191390	32363359	2	neutral	AA	100	somatic	0	0.988783500795415	0.483776140852252
21	35434665	35437682	2	neutral	AA	100	germline	1	0.204506483963749	0.440943131334893
21	36315629	36445360	2	neutral	AA	54.572	germline	1	0.000408507923129406	0.00132639809643265
21	41064387	41169982	2	neutral	AA	57.6098	somatic	0	0.626101518343464	0.760157188638108
21	42159558	42171626	2	neutral	AA	100	germline	1	0.127704332956183	0.0423176805160199
21	43309035	43315069	2	neutral	AA	100	germline	1	0.763553433913865	0.96959124045656
22	11211172	11214189	1	loss	A	-1	somatic	0	0.0834553887223786	0.270368141505188
22	29120084	29123101	3	gain	AAB	29.0522	germline	1	0.0832948251753691	0.270089423275814
22	29123101	29189475	2	neutral	AA	93.3662	somatic	0	0.0201170266681537	0.0210398041143733
22	35298900	35323036	2	neutral	AA	54.5678	somatic	0	0.0943972841143238	0.145672228962777
22	36547938	36596210	2	neutral	AA	36.3792	germline	1	0.799970633637573	0.623171583101994
22	40132134	40210576	2	neutral	AA	54.5679	somatic	0	1.20480009993766e-05	0.000120158586437102
22	48839196	48860315	2	neutral	AA	91.8965	somatic	0	0.564090062220327	0.993676336241238
22	50643362	50646379	4	gain	AAAA	16.3798	germline	1	0.0832815177871374	0.270066313214333
X	3523856	3526873	2	gain	AA	6.0631	germline	1	0.534075631668081	0.745050564477742
X	125271874	125274891	0	loss	-	-1	germline	1	0.0832667338201285	0.270040637061164
Y	10656044	10659061	9	gain	-	-1	germline	1	0.0832704296125575	0.270047055932389
Y	10659061	10665095	3	gain	-	-1	germline	1	0.0144680233229161	0.037086212921897
Y	10746554	10749571	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
Y	10749571	10752588	2	gain	-	-1	germline	1	0.172832412278194	0.401763759536954
Y	10752588	10755605	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
Y	10755605	10758622	3	gain	-	-1	germline	1	0.0838783397791505	0.271101258011036
Y	10758622	10764656	6	gain	-	-1	germline	1	0.0143091439711968	0.0366366723914731
Y	10764656	10767673	2	gain	-	-1	germline	1	0.534030583103647	0.745011495043619
Y	10767673	10773707	3	gain	-	-1	germline	1	0.0143197617661778	0.0366640791570518
Y	10773707	10776724	5	gain	-	-1	germline	1	0.0832756039451972	0.270056042539222
Y	10776724	10794826	2	gain	-	-1	germline	1	0.00118726923627845	0.0100206462379169
Y	10794826	10797843	5	gain	-	-1	germline	1	0.0832756039451972	0.270056042539222
Y	10797843	10806894	3	gain	-	-1	germline	1	0.00441568498765718	0.0119875006210289
Y	10806894	10809911	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
Y	10812928	10888353	2	gain	-	-1	germline	1	0.30579641144982	0.00357558388275048
Y	10924557	10927574	5	gain	-	-1	germline	1	0.0832763431568356	0.270057326358019
Y	10927574	10933608	2	gain	-	-1	germline	1	0.207158301312113	0.494468266866986
Y	10933608	10936625	5	gain	-	-1	germline	1	0.0832756039451972	0.270056042539222
Y	10936625	10954727	2	gain	-	-1	germline	1	0.100724388912852	0.12098143804294
Y	10975846	10984897	2	gain	-	-1	germline	1	0.306276096725469	0.199476860963005
Y	10984897	10987914	14	gain	-	-1	germline	1	0.0832682121211547	0.270043204596285
Y	10987914	10990931	4	gain	-	-1	germline	1	0.0832815177871374	0.270066313214333
Y	10990931	10996965	2	gain	-	-1	germline	1	0.836339064027088	0.699883102956863
Y	10996965	10999982	7	gain	-	-1	germline	1	0.0832726471517971	0.270050907308588
Y	11002999	11036186	2	gain	-	-1	germline	1	0.511949530200186	0.0372958341910056
Y	11292631	11304699	32	gain	AAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	6.52717	germline	1	0.000532065032078109	0.000670989585897508
Y	11304699	11307716	27	gain	AAAAAAAAAAAAAAAAABBBBBBBBBB	52.631	germline	1	0.0832667338201285	0.270040637061158
Y	11313750	11334869	11	gain	AAAAAAABBBB	1.43661	germline	1	0.000532122517751319	0.000671066789709074
Y	11687858	11690875	9	gain	AAAAAABBB	21.8824	germline	1	0.0832704296125575	0.270047055932389
Y	11721045	11724062	40	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBB	100	germline	1	0.0832667338201285	0.270040637061158
Y	11724062	11745181	2	gain	AA	2.25311	germline	1	0.384671271325345	0.158938713393714
Y	11745181	11748198	8	gain	AAAAABBB	4.30947	germline	1	0.0832711687869888	0.27004833972
Y	26637093	26640110	6	gain	AAAABB	12.3474	germline	1	0.0832756039451972	0.270056042539222
Y	56825195	56837263	29	gain	AAAAAAAAAAAAAAAAAAABBBBBBBBBB	4.92163	germline	1	0.000532073243962828	0.00067101531957614
Y	56837263	56852348	9	gain	AAAAAABBB	31.9217	germline	1	0.0027002953628039	0.00495811034210292
