chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	2820090	2860377	2	neutral	AA	5.15269	somatic	0	0.0172117633398994	0.0146217369012519
1	5668071	5677368	3	gain	AAB	0.40532	germline	1	0.00270420687520975	0.00496547451265894
1	8556339	8807358	2	neutral	AA	25.8423	somatic	0	0.0143574713940112	0.0254924643863625
1	10831005	10920876	2	neutral	AA	49.1973	somatic	0	0.0264497182971057	0.025601338119535
1	11311350	11339241	2	neutral	AA	27.4191	somatic	0	0.128641868054219	0.206597085449261
1	12795771	12854652	1	loss	A	-1	germline	1	0.000100984326305922	4.84300118676062e-05
1	16201572	16303839	2	neutral	AA	14.1231	somatic	0	0.0160235178690234	0.0556470849332995
1	16722204	16725303	5	gain	AAABB	18.9793	germline	1	0.0832881091088273	0.270077741187928
1	16905045	16939134	3	gain	AAB	1.32204	germline	1	4.6244568833334e-06	1.68226801322557e-06
1	22418166	22480146	2	neutral	AA	54.5678	somatic	0	0.959789165479295	0.831813410666207
1	31430058	31433157	8	gain	AAAAAAAA	9.9857	germline	1	0.0832728873793423	0.270051305596606
1	51991923	52357605	2	neutral	AA	14.8209	somatic	0	0.199651649248463	0.155176842620694
1	55661139	55667337	1	loss	A	-1	germline	1	0.0195322407737165	0.0527416728771035
1	57625905	57678588	2	neutral	AA	40.5319	somatic	0	0.69488573800781	0.435405055998948
1	61214547	61257933	2	neutral	AA	36.3859	somatic	0	0.839780421470426	0.835584431904921
1	62457246	62506830	2	neutral	AA	100	somatic	0	0.612325106752961	0.745715106576804
1	107609676	107730537	2	neutral	AA	27.4134	somatic	0	0.000496526177743309	0.000264766550569062
1	109642620	109648818	1	loss	A	-1	somatic	0	0.0205474279524112	0.055944169180008
1	112069137	112084632	2	neutral	AA	100	somatic	0	0.450899793776543	0.722361306854952
1	115685670	115691868	1	loss	A	-1	somatic	0	0.0182755646594669	0.048747957184633
1	125150016	125156214	4	gain	-	-1	germline	1	0.0143152459735671	0.0366462419790445
1	125156214	125162412	3	gain	-	-1	germline	1	0.0185944519253221	0.0497527652389879
1	125162412	125165511	6	gain	-	-1	germline	1	0.0832774536615486	0.270059236075671
1	143703729	143706828	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
1	151937772	152018346	2	neutral	AA	100	somatic	0	0.650308259562296	0.669511371889947
1	152582364	152613354	1	loss	A	-1	germline	1	2.87367858563323e-07	3.02404283836211e-08
1	191840496	191862189	2	neutral	AA	100	germline	1	0.998535036589121	0.97191568591988
1	194056281	194121360	2	neutral	AA	42.7054	somatic	0	0.439028978258585	0.596289352629406
1	195202911	195382653	2	neutral	AA	36.3786	somatic	0	0.251712952615436	0.0579958889061418
1	203938992	203951388	1	loss	A	-1	germline	1	0.000913369344548717	0.00146973263345718
1	209904567	209913864	1	loss	A	-1	somatic	0	0.00594652348099895	0.00950964323265135
1	218770806	218820390	2	neutral	AA	100	somatic	0	0.492777295523459	0.389217156011056
1	222198300	222207597	1	loss	A	-1	germline	1	0.0206328604627363	0.0562146809953693
1	224965707	225167142	2	neutral	AA	100	germline	1	0.131548793663691	0.146023969508983
1	228067806	228074004	1	loss	A	-1	somatic	0	0.0212587994075017	0.0581761076680104
1	229676187	229685484	1	loss	A	-1	somatic	0	0.00651966285047406	0.00932333672977381
1	234774042	234777141	3	gain	AAB	15.2235	germline	1	0.0833117072437466	0.270118720087404
1	234777141	234783339	7	gain	AAAAABB	47.5477	germline	1	0.0143097208224476	0.0366368384466487
1	236094216	236097315	5	gain	AAABB	34.1688	germline	1	0.0832843034651679	0.270071132113015
1	236710917	236714016	4	gain	AAAB	36.378	somatic	0	0.0832980044415964	0.270094925335202
1	240184896	240187995	4	gain	AABB	15.1412	somatic	0	0.0832949596223951	0.270089637820271
2	908007	911106	4	gain	AAAA	5.75695	germline	1	0.0832934372466036	0.270086994091139
2	3179574	3182673	6	gain	AAAABB	16.3497	germline	1	0.0832766926004289	0.270057914317355
2	3684711	3690909	1	loss	A	-1	somatic	0	0.0207447016646119	0.0505467735653023
2	4165056	4177452	1	loss	A	-1	germline	1	0.0016602926822522	0.00166601690822354
2	5742447	5782734	2	neutral	AA	47.593	somatic	0	0.493874315609469	0.381780822101725
2	18293397	18299595	1	loss	A	-1	somatic	0	0.0231041975290181	0.0640966929522031
2	24479001	24500694	2	neutral	AA	36.3786	somatic	0	0.936705699453862	0.991576509253215
2	35251125	35294511	2	neutral	AA	60.3336	somatic	0	0.501553561253418	0.579220914431436
2	35753163	35765559	1	loss	A	-1	germline	1	0.000929849851381452	0.00134450710651135
2	44132859	44222730	2	neutral	AA	25.6111	somatic	0	0.173194452889629	0.199510038291591
2	46100724	46230882	2	neutral	AA	28.6789	somatic	0	0.00115502750277967	0.0127317013601971
2	62401464	62624592	2	neutral	AA	100	somatic	0	0.0670945171666884	0.186586335054818
2	65295930	65326920	1	loss	A	-1	germline	1	2.91195204812273e-07	3.32289944449116e-08
2	75101166	75160047	2	neutral	AA	72.5771	somatic	0	0.42256187191593	0.370601626981338
2	89771832	89774931	5	gain	-	-1	germline	1	0.0832888702544628	0.270079063017077
2	89774931	89781129	6	gain	-	-1	germline	1	0.0143098409144231	0.0366372000819294
2	89781129	89790426	4	gain	-	-1	germline	1	0.0143140446937034	0.0366440717456959
2	89790426	89796624	3	gain	-	-1	germline	1	0.0149382989447801	0.0385037660707068
2	89796624	89815218	5	gain	AAAAA	15.2493	germline	1	0.000532578516199571	0.000671415510198892
2	89815218	89818317	2	neutral	AA	6.83707	somatic	0	0.0996582068988427	0.297444255460696
2	89818317	89821416	5	gain	AAABB	29.9055	germline	1	0.0832888702544628	0.270079063017077
2	89821416	89824515	3	gain	AAA	7.12866	germline	1	0.0833147525588449	0.270124008017897
2	89824515	89827614	6	gain	AAAABB	6.1164	germline	1	0.0832766926004289	0.270057914317355
2	89827614	89843109	25	gain	AAAAAAAAAAAAAAAABBBBBBBBB	71.7795	germline	1	0.000107520454681161	9.08077024357468e-05
2	89843109	89849307	4	gain	AABB	13.3751	germline	1	0.0143157265104125	0.0366469654151504
2	91411203	91414302	4	gain	-	-1	germline	1	0.0832903925626376	0.270081706689542
2	109196364	109202562	7	gain	AAAABBB	100	germline	1	0.0143093605518557	0.0366372000819294
2	121096524	121118217	2	neutral	AA	100	somatic	0	0.120850951689055	0.0457472285140357
2	125686143	125695440	1	loss	A	-1	germline	1	0.00584893082642574	0.00950778218982162
2	130805691	130979235	2	neutral	AA	100	somatic	0	0.424934024975486	0.833240937037963
2	132243627	132246726	4	gain	AABB	23.3356	germline	1	0.08329267606716	0.270085672233656
2	134849886	134883975	2	neutral	AA	54.5678	somatic	0	0.714546671296829	0.97575814742816
2	139312446	139318644	2	neutral	AA	100	somatic	0	0.0746449951141777	0.173657687780712
2	140750382	140871243	2	neutral	AA	41.5389	somatic	0	0.0351011775954776	0.0777013915862963
2	151730139	151742535	2	neutral	AA	100	somatic	0	0.935529888586251	0.93168060733716
2	151767327	151987356	2	neutral	AA	25.582	somatic	0	0.681050820446189	0.768351738776865
2	172040985	172047183	0	loss	-	-1	germline	1	0.0145702865675592	0.0374282376447564
2	176401278	176407476	1	loss	A	-1	germline	1	0.0239444887062083	0.0527377025692258
2	179202774	179212071	1	loss	A	-1	germline	1	0.00509302314373074	0.0075449590677894
2	221925588	221959677	2	neutral	AA	21.8271	somatic	0	0.509232015405453	0.762808135505842
2	225514230	225539022	2	neutral	AA	100	somatic	0	0.0156284610051571	0.0730765742172522
2	226403643	226416039	2	neutral	AA	100	somatic	0	0.246470642284541	0.407204481106889
3	32059155	32068452	1	loss	A	-1	germline	1	0.0206411391963057	0.0561921391464785
3	55317150	55366734	2	neutral	AA	100	germline	1	0.30959599161074	0.24010677520672
3	65202960	65230851	1	loss	A	-1	germline	1	4.33119892306318e-06	1.27477031242051e-06
3	68689335	68698632	1	loss	A	-1	germline	1	0.00533898899202416	0.00943915528039907
3	75724065	75755055	3	gain	AAB	0.852192	somatic	0	0.000200073826675583	0.000268227778480568
3	90667443	90713928	1	loss	A	-1	germline	1	1.44579260532072e-06	7.77978790278411e-08
3	93775740	93785037	3	gain	-	-1	somatic	0	0.00271280662712541	0.00498602336687071
3	93785037	93794334	2	neutral	AA	9.8348	somatic	0	0.145880203076706	0.426422036410969
3	93794334	93797433	3	gain	-	-1	somatic	0	0.0835373042225339	0.270510231039475
3	98687655	98693853	1	loss	A	-1	germline	1	0.0143414559848662	0.0367356809103235
3	99223782	99229980	1	loss	A	-1	somatic	0	0.0239737098242408	0.0558174106242341
3	110082678	110095074	2	neutral	AA	54.5679	somatic	0	0.64074551324178	0.847551147505042
3	140731788	140765877	2	neutral	AA	72.4483	somatic	0	0.253410394323242	0.319669188877748
3	141838131	141847428	1	loss	A	-1	germline	1	0.00701862514643672	0.00942134381767845
3	141875319	142160427	2	neutral	AA	100	somatic	0	0.450965477459329	0.37982881478378
3	146666373	146675670	1	loss	A	-1	somatic	0	0.0080780793117824	0.0108215846961331
3	148857366	148906950	2	neutral	AA	100	somatic	0	0.47154696521369	0.0627159425227771
3	185453457	185456556	1	loss	A	-1	germline	1	0.0832865868344599	0.2700750975438
3	185456556	185472051	2	neutral	AA	100	somatic	0	0.748112524688776	0.710565688771946
3	187281867	187303560	2	neutral	AA	27.2839	somatic	0	0.61633834020159	0.476213041616874
3	190018284	190024482	1	loss	A	-1	germline	1	0.0161819683124766	0.0421474256163452
3	191344656	191353953	1	loss	A	-1	germline	1	0.00732330895103275	0.0117501721946525
3	193157571	193166868	1	loss	A	-1	germline	1	0.00570080450648135	0.00909594070617625
3	197381508	197390805	3	gain	AAB	2.04884	germline	1	0.00272895436635066	0.00504448267131163
3	197725497	197744091	2	neutral	AA	27.2839	germline	1	0.697928074800702	0.857464241498562
4	6895275	6898374	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
4	7022334	7034730	2	neutral	AA	100	somatic	0	0.399763447849816	0.702300509361708
4	10208106	10232898	1	loss	A	-1	germline	1	4.05109937275313e-06	1.26922125265327e-06
4	10390947	10400244	1	loss	A	-1	germline	1	0.00478253400760661	0.00792328877159254
4	11990031	12237951	2	neutral	AA	21.858	somatic	0	0.98474711679924	0.839435671335172
4	12281337	12380505	2	neutral	AA	69.9975	somatic	0	0.0850882815195963	0.0416010463340991
4	26028501	26037798	2	neutral	AA	21.322	somatic	0	0.315131725206562	0.428084517470922
4	31414563	31454850	2	neutral	AA	55.0709	somatic	0	0.347744770867511	0.570650912942506
4	35979390	36004182	2	neutral	AA	100	somatic	0	0.137917826944031	0.25332153175861
4	38250957	38285046	2	neutral	AA	100	somatic	0	0.642546114169869	0.725835697487418
4	40218822	40237416	2	neutral	AA	100	somatic	0	0.611063420690291	0.575260866142616
4	40293198	40296297	5	gain	AAABB	6.5326	germline	1	0.0832888702544628	0.270079063017077
4	42760002	42769299	1	loss	A	-1	germline	1	0.00436770833775036	0.00959426876369729
4	44535729	44582214	2	neutral	AA	100	somatic	0	0.902983361695325	0.752767543530765
4	48961101	48967299	2	neutral	AA	100	somatic	0	0.803849868503128	0.866439996071293
4	49147041	49156338	87	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBBBBB	75.5375	germline	1	0.0143061184765666	0.0366314142922073
4	49645980	49658376	20	gain	AAAAAAAAAAAAABBBBBBB	9.07226	germline	1	0.00269996009666388	0.00495783460722565
4	60418104	60470787	2	neutral	AA	100	somatic	0	0.937353381256561	0.989550797497586
4	63201006	63204105	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
4	63269184	63287778	1	loss	A	-1	germline	1	7.45728682647632e-05	4.00634007122758e-05
4	66777252	66783450	2	neutral	AA	27.2839	somatic	0	0.207451751639846	0.330400421519633
4	68518890	68621157	1	loss	A	-1	germline	1	2.48567981486227e-14	0
4	69309135	69364917	1	loss	A	-1	germline	1	6.22106818662338e-05	3.77238679177827e-05
4	70620012	70623111	0	loss	-	-1	germline	1	0.0832690822991064	0.270044696993915
4	73920447	73935942	2	neutral	AA	100	somatic	0	0.853235631840511	0.680746837423447
4	79988289	79997586	2	neutral	AA	100	somatic	0	0.741477831431666	0.911282483893818
4	83465367	83697792	2	neutral	AA	14.6399	somatic	0	0.00988022621780923	0.0152539361839555
4	89179923	89186121	3	gain	AAB	15.3777	somatic	0	0.0143305099661389	0.0366693981329171
4	110764458	110770656	2	neutral	AA	100	somatic	0	0.227279284767167	0.537917166510085
4	114253932	114260130	1	loss	A	-1	germline	1	0.0222574286904761	0.0490837232083905
4	127210851	127241841	2	neutral	AA	54.5873	somatic	0	0.590490803748263	0.541262763728262
4	135751695	135767190	2	neutral	AA	54.5678	somatic	0	0.581394080460394	0.73795335158647
4	147146718	147267579	2	neutral	AA	54.8869	somatic	0	0.862917000111336	0.980429253212503
4	158991096	159006591	2	neutral	AA	100	somatic	0	0.198633282483113	0.190628702975435
4	159815430	159824727	2	neutral	AA	100	somatic	0	0.281138871974026	0.267631184352293
4	161132505	161141802	1	loss	A	-1	germline	1	0.00571116213968824	0.00927734527836599
4	163878219	163896813	2	neutral	AA	100	somatic	0	0.0145261126925022	0.0553166454551508
4	165080631	165083730	0	loss	-	-1	germline	1	0.0832698433038857	0.27004601870501
4	166664220	166667319	0	loss	-	-1	germline	1	0.0832698433038857	0.27004601870501
4	169289073	169502904	2	neutral	AA	21.1264	somatic	0	0.126661284128408	0.0575744953657588
4	169958457	170042130	2	neutral	AA	54.5678	somatic	0	0.438460504708635	0.175495768958127
4	172502736	172505835	0	loss	-	-1	germline	1	0.0832675603064494	0.270042053585892
4	177182226	177191523	2	neutral	AA	36.4085	somatic	0	0.459844149039233	0.893418176499692
4	177523116	177554106	2	neutral	AA	21.8274	somatic	0	0.707992962978391	0.840927195083341
4	180138672	180188256	2	neutral	AA	100	somatic	0	0.0625020975322305	0.215574589788472
4	185890416	185912109	2	neutral	AA	100	somatic	0	0.882599396947203	0.873879618399135
4	186429642	186438939	4	gain	AABB	6.45566	germline	1	0.0143205326615262	0.0366617986091996
5	415266	418365	4	gain	AAAB	33.3101	germline	1	0.0832919148933512	0.270084350380896
5	418365	427662	2	neutral	AA	100	somatic	0	0.717617350959722	0.686886227057897
5	1797420	1850103	2	neutral	AA	31.0164	germline	1	0.00494344142818439	0.0139997880439923
5	3322128	3325227	4	gain	AAAA	8.0632	germline	1	0.0832949596223951	0.270089637820271
5	3325227	3340722	2	neutral	AA	100	somatic	0	0.132910245773225	0.263153634934941
5	17342004	17357499	1	loss	A	-1	germline	1	0.000210472278841421	0.000215371204504877
5	17633310	17645706	1	loss	A	-1	germline	1	0.000917362207284996	0.00109474315561087
5	25854957	25895244	2	neutral	AA	93.1697	somatic	0	0.441189769375263	0.58290001514353
5	28870284	28879581	2	neutral	AA	100	germline	1	0.360035978612611	0.54524957287104
5	35220135	35232531	2	neutral	AA	100	somatic	0	0.630959908113816	0.977738105633266
5	45003678	45016074	1	loss	A	-1	germline	1	0.00154403432727167	0.00167461472034947
5	46320753	46404426	2	neutral	AA	9.18461	germline	1	7.67407095539397e-09	3.96026903937141e-07
5	46404426	46410624	1	loss	A	-1	somatic	0	0.0206540598039607	0.0561523167465769
5	46432317	49599495	2	neutral	AA	-1	germline	1	NA	NA
5	49599495	49602594	209	gain	-	-1	somatic	0	0.0832652773597176	0.270038088509269
5	49602594	50151117	2	neutral	AA	-1	germline	1	NA	NA
5	50151117	50250285	2	neutral	AA	2.36787	germline	1	2.8611446640554e-10	6.03130856369205e-09
5	56702403	56708601	2	neutral	AA	100	somatic	0	0.82723472817102	0.971499302584544
5	62057475	62447949	2	neutral	AA	41.3922	somatic	0	0.326340676373236	0.156184289639738
5	66327897	66361986	2	neutral	AA	100	somatic	0	0.014570307417936	0.022397111568233
5	72532095	73074420	2	neutral	AA	100	somatic	0	0.218033528153558	0.20644967527886
5	86418714	86421813	1	loss	A	-1	somatic	0	0.0832903925626376	0.270081706689546
5	86917653	86923851	1	loss	A	-1	somatic	0	0.0214565258570771	0.0551279966544312
5	91203570	91206669	0	loss	-	-1	germline	1	0.0832667993185717	0.270040731888964
5	91550658	91652925	2	neutral	AA	100	somatic	0	0.577576127146535	0.247905001716942
5	94150719	94259184	2	neutral	AA	100	somatic	0	0.10261984767826	0.284446408224355
5	99217584	99233079	2	neutral	AA	10.0987	somatic	0	0.456020764622481	0.784915019293117
5	102267000	109013523	2	neutral	AA	15.7325	somatic	0	9.41954986926676e-12	6.72137845381116e-08
5	116138124	116147421	2	neutral	AA	100	germline	1	0.0188568030613284	0.0216100081713037
5	118050207	118059504	1	loss	A	-1	germline	1	0.00598752448205298	0.009489189912254
5	120042864	120049062	1	loss	A	-1	germline	1	0.0218546986427489	0.0566138525131233
5	120768030	120780426	2	neutral	AA	100	germline	1	0.568814540422559	0.914143128417292
5	123625308	123674892	2	neutral	AA	49.1096	somatic	0	0.290239206764712	0.452950792961795
5	134044146	134115423	2	neutral	AA	49.7825	somatic	0	0.786430561467065	0.519327904551691
5	135779586	135785784	1	loss	A	-1	germline	1	0.0206063879676705	0.0542864655583014
5	137518125	137521224	1	loss	A	-1	germline	1	0.0833010493509568	0.270100212925693
5	140542749	140756580	2	neutral	AA	26.2325	somatic	0	0.000268910610744505	0.00138084153164142
5	150822132	150843825	1	loss	A	-1	germline	1	2.12178873914127e-05	7.5065351163861e-06
5	178582974	178586073	6	gain	AAAABB	25.3774	germline	1	0.0832766926004289	0.270057914317355
5	180950610	181003293	1	loss	A	-1	germline	1	1.96127988567786e-11	1.13353770814228e-13
5	181043580	181046679	4	gain	AAAA	10.4672	germline	1	0.0832934372466036	0.270086994091139
6	257217	297504	3	gain	-	-1	germline	1	1.986586470422e-09	7.59871054967221e-11
6	297504	368781	4	gain	-	-1	germline	1	4.54114850097401e-16	0
6	371880	374979	6	gain	-	-1	germline	1	0.0832820201465858	0.270067166724734
6	374979	384276	4	gain	-	-1	germline	1	0.00270315555799493	0.00496319610497042
6	19040256	19049553	1	loss	A	-1	germline	1	0.00547375082841838	0.00909875022597306
6	20958537	20961636	4	gain	-	-1	germline	1	0.0832919148933512	0.270084350380896
6	32489916	32666559	1	loss	A	-1	germline	1	2.17934719009606e-15	0
6	35657094	35663292	1	loss	A	-1	germline	1	0.0156826868248042	0.0404658694782897
6	60232164	60238362	3	gain	-	-1	germline	1	0.0143175286503139	0.0366494975399219
6	60238362	60241461	5	gain	-	-1	germline	1	0.0832843034651679	0.270071132113015
6	61319913	61323012	6	gain	-	-1	germline	1	0.0832820201465858	0.270067166724734
6	78255948	78327225	1	loss	A	-1	germline	1	5.27159004917194e-15	0
6	101823843	101892021	2	neutral	AA	37.3909	germline	1	0.147168283473278	0.443250266838476
6	103289670	103314462	1	loss	A	-1	germline	1	2.2326917627228e-05	7.48012135554088e-06
6	104767893	104786487	2	neutral	AA	54.5696	somatic	0	0.809504039879677	0.98879649292594
6	106614897	106670679	2	neutral	AA	100	somatic	0	0.573272462914821	0.701217004855925
6	110042391	110215935	2	neutral	AA	27.2842	somatic	0	0.316326681377549	0.76092835153557
6	112754016	112757115	2	neutral	AA	100	somatic	0	0.671975188621762	0.833577826220879
6	113048421	113054619	2	neutral	AA	100	somatic	0	0.0840501975951279	0.174131516867583
6	114929514	114932613	2	neutral	AA	100	somatic	0	0.121932818248343	0.331826223000799
6	118645215	118648314	5	gain	AAAAA	10.362	germline	1	0.0832858257057281	0.270073775728813
6	119153451	119299104	2	neutral	AA	54.5678	germline	1	0.117327000460694	0.302460387734293
6	128577510	128620896	2	neutral	AA	54.5678	germline	1	0.5777727079608	0.520256170911996
6	129342963	129395646	2	neutral	AA	54.5873	somatic	0	0.526287654264481	0.737815698096213
6	137815629	137828025	2	neutral	AA	54.5678	somatic	0	0.280401767397483	0.503029279358879
6	138754626	138757725	2	neutral	AA	100	somatic	0	0.745130254274492	0.872404522739167
6	139489089	139492188	2	neutral	AA	100	somatic	0	0.305530837281236	0.551027472477342
6	139922949	139926048	2	neutral	AA	100	somatic	0	0.160439747164729	0.385619198570999
6	142358763	142529208	2	neutral	AA	77.5296	somatic	0	0.260709648382271	0.36189683302604
6	144906141	144952626	2	neutral	AA	54.5706	germline	1	0.68984815658683	0.941133470596168
6	145107576	145358595	2	neutral	AA	15.7761	somatic	0	0.00303902844831089	0.0406220445451749
6	148045428	148073319	2	neutral	AA	100	somatic	0	0.113234876180983	0.146839729527643
6	150949191	150952290	2	neutral	AA	100	somatic	0	0.547096621497146	0.754312204176186
6	155244405	155386959	2	neutral	AA	36.6936	somatic	0	0.466074455887438	0.181851332701159
6	155569800	156211293	2	neutral	AA	15.5197	somatic	0	0.955480465157127	0.363570223239625
6	157221567	157224666	2	neutral	AA	100	somatic	0	0.42848818211043	0.663335345560963
6	157308339	157311438	10	gain	AAAAAAABBB	15.9892	germline	1	0.0832690822991064	0.270044696993911
6	157447794	157460190	2	neutral	AA	100	somatic	0	0.301831379559633	0.692402398600721
6	161572563	161575662	2	neutral	AA	100	somatic	0	0.136467234484257	0.352850695365859
6	161637642	161656236	2	neutral	AA	28.1447	somatic	0	0.985752706946373	0.850268111935702
6	161987829	161990928	2	neutral	AA	100	somatic	0	0.151324926245083	0.373420982583849
6	165306858	165319254	1	loss	A	-1	germline	1	0.00172460369614458	0.00176227021676545
6	165703530	165709728	2	neutral	AA	54.5802	somatic	0	0.742852916255226	0.825861479954506
6	167268525	167277822	2	neutral	AA	54.5678	somatic	0	0.612892739287681	0.909058993308113
6	167996790	168052572	2	neutral	AA	25.8139	somatic	0	0.909885206725254	0.703701091170906
6	170144397	170147496	4	gain	AAAA	7.55041	germline	1	0.0832919148933512	0.270084350380896
7	904908	908007	4	gain	AAAB	13.2152	germline	1	0.083296482020726	0.270092281568292
7	908007	1143531	2	neutral	AA	25.5702	somatic	0	0.199192991547497	0.492528166858702
7	16920540	16960827	2	neutral	AA	54.5678	somatic	0	0.0932926294688325	0.166711419572454
7	20772597	20781894	3	gain	AAB	100	germline	1	0.00270451357976672	0.00496400446249978
7	23490420	23546202	2	neutral	AA	22.9898	somatic	0	0.260121792424362	0.491724884922434
7	26096679	26105976	1	loss	A	-1	germline	1	0.00368900879315636	0.00626158520856379
7	30518952	30590229	2	neutral	AA	38.7604	somatic	0	0.0124972158082666	0.0538612692690933
7	31275108	31278207	0	loss	-	-1	germline	1	0.0832675603064494	0.270042053585892
7	41275581	41399541	2	neutral	AA	31.0727	somatic	0	0.0635744478760196	0.157322404224546
7	50978550	51229569	2	neutral	AA	14.4824	somatic	0	0.588924582117877	0.234271873609216
7	57486450	57495747	3	gain	AAB	1.76879	germline	1	0.00270357165972676	0.00496334307009105
7	57904815	57917211	1	loss	A	-1	germline	1	0.00213001624352816	0.00217737830785891
7	61106082	61958307	2	neutral	AA	5.3552	somatic	0	0.000355914643354865	0.000668688032767095
7	61958307	62358078	3	gain	AAB	0.534123	somatic	0	4.12538094271986e-10	4.65471661215133e-10
7	62401464	62404563	5	gain	-	-1	germline	1	0.0832888702544628	0.270079063017077
7	67768932	67892892	2	neutral	AA	94.356	somatic	0	0.334278812286516	0.157334290518135
7	68810196	69231660	2	neutral	AA	100	germline	1	0.00757381506357396	0.0135184344633766
7	71509425	71546613	2	neutral	AA	54.5678	somatic	0	0.496906499303785	0.737637552708221
7	83527347	83567634	2	neutral	AA	100	somatic	0	0.674346174018587	0.988198115635663
7	83648208	83660604	2	neutral	AA	54.5678	somatic	0	0.686341249319104	0.973999447217721
7	87308127	87320523	1	loss	A	-1	germline	1	0.00130087849723447	0.00158886156074456
7	96815859	96924324	2	neutral	AA	100	somatic	0	0.569522125963825	0.252436354396101
7	97770351	97773450	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
7	97804440	97863321	2	neutral	AA	28.5511	somatic	0	0.182260615225812	0.510195154365286
7	100729896	100739193	1	loss	A	-1	germline	1	0.0056246830760056	0.00856929808640161
7	100949925	100956123	3	gain	AAB	1.12114	germline	1	0.0143177689507536	0.0366509445370892
7	100956123	100959222	14	gain	AAAAAAAAAAAAAB	14.5321	germline	1	0.0832675603064494	0.270042053585888
7	100959222	100974717	4	gain	AABB	0.800587	germline	1	0.000107783123975691	9.10904765367704e-05
7	106100463	106103562	4	gain	AABB	10.9023	germline	1	0.0832972432283437	0.270093603449386
7	109800669	109813065	1	loss	A	-1	germline	1	0.00109110114763812	0.00145140417670597
7	128106462	128149848	2	neutral	AA	98.8194	germline	1	0.426122584267249	0.726325427424953
7	129085746	129132231	2	neutral	AA	36.3786	somatic	0	0.450524854868762	0.805273595915258
7	133092753	133136139	2	neutral	AA	54.5678	somatic	0	0.10580885249337	0.122623218659533
7	135754794	135770289	2	neutral	AA	16.4969	somatic	0	0.0647862337090483	0.0539380796738503
7	143846283	143849382	4	gain	AABB	12.5099	germline	1	0.0832934372466036	0.270086994091139
7	150753954	150769449	2	neutral	AA	54.5693	germline	1	0.155366225703094	0.0560539188915462
7	150908904	150912003	3	gain	AAB	100	somatic	0	0.083303333092145	0.270104178668139
7	152399523	152402622	4	gain	AAAB	24.8084	germline	1	0.0832934372466036	0.270086994091139
7	152402622	152408820	10	gain	AAAAAAAABB	2.67956	germline	1	0.0143076793948851	0.0366350303170924
7	154599813	154609110	1	loss	A	-1	germline	1	0.00655043399295599	0.00939856330668132
7	155315682	155343573	2	neutral	AA	6.85789	germline	1	0.0547216440580037	0.167764821889525
7	158151267	158154366	4	gain	AABB	7.85454	germline	1	0.0832934372466036	0.270086994091139
7	158594424	158597523	5	gain	AAABB	10.1241	germline	1	0.0832865868344599	0.270075097543796
8	625998	632196	3	gain	-	-1	somatic	0	0.017188634546321	0.0453986747142446
8	3926433	3932631	1	loss	A	-1	germline	1	0.0230576570124947	0.0566054127585712
8	4264224	4267323	1	loss	A	-1	germline	1	0.0833006687323561	0.270100212925693
8	6111228	6114327	0	loss	-	-1	germline	1	0.0832698433038857	0.27004601870501
8	15544584	15553881	1	loss	A	-1	germline	1	0.00410300888328581	0.00711054518495002
8	25114296	25117395	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
8	25210365	25213464	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
8	25715502	25727898	3	gain	-	-1	somatic	0	0.0159525650791554	0.0416097626641275
8	32821509	32833905	0	loss	-	-1	germline	1	0.0143135041467766	0.0366538386813798
8	38071215	38077413	1	loss	A	-1	somatic	0	0.0252105209011918	0.0564636812312546
8	40916097	40922295	1	loss	A	-1	germline	1	0.0248836332899142	0.0562388041385733
8	42332340	42338538	1	loss	A	-1	germline	1	0.0187119300619498	0.0501686094585447
8	43237248	43240347	5	gain	-	-1	germline	1	0.0832843034651679	0.270071132113015
8	43240347	43243446	3	gain	-	-1	germline	1	0.0833063781592881	0.27010946639085
8	50117028	50126325	1	loss	A	-1	germline	1	0.006799245967622	0.00962769123042684
8	52342110	52379298	2	neutral	AA	72.6657	somatic	0	0.577956451579711	0.658867007352551
8	57715776	57734370	2	neutral	AA	100	somatic	0	0.066718077526589	0.166112857845617
8	59221890	59224989	3	gain	AAB	13.3436	somatic	0	0.0833010493509568	0.270100212925689
8	59469810	59534889	2	neutral	AA	100	somatic	0	0.717087733542207	0.45683653735414
8	59711532	59748720	2	neutral	AA	100	somatic	0	0.607012645210845	0.850394591758323
8	72364749	72429828	2	neutral	AA	21.4516	somatic	0	0.10977802781355	0.207389810989655
8	74379099	74456574	2	neutral	AA	100	somatic	0	0.94845349825501	0.912575517172963
8	74555742	74605326	2	neutral	AA	100	somatic	0	0.435403651112318	0.629117033308758
8	83325912	83335209	2	neutral	AA	100	somatic	0	0.912407261137864	0.938217066251477
8	106946490	106952688	2	neutral	AA	100	somatic	0	0.0676442064451914	0.0980294412067688
8	112853184	112871778	2	neutral	AA	100	somatic	0	0.812535561930467	0.817086804624686
8	116528598	116782716	2	neutral	AA	54.568	somatic	0	0.111559116089204	0.421125475044448
8	121378533	121400226	2	neutral	AA	55.0709	somatic	0	0.112812819182586	0.326890121015651
8	123730674	123746169	2	neutral	AA	100	somatic	0	0.901987850121944	0.898928333035592
8	130015446	130027842	2	neutral	AA	54.5679	germline	1	0.975249463418129	0.953617889040432
8	135711408	135717606	2	neutral	AA	100	somatic	0	0.786722651138151	0.984567353815269
8	138633765	138714339	2	neutral	AA	4.58504	germline	1	0.0068693207104697	0.0268640582204425
8	139591356	139594455	3	gain	AAB	2.51148	somatic	0	0.0833109459290607	0.270117398116586
8	139752504	139786593	2	neutral	AA	100	germline	1	0.136544778447104	0.154099097074733
8	139960137	139963236	0	loss	-	-1	germline	1	0.0832675603064494	0.270042053585892
8	144125193	144128292	5	gain	AAAAB	32.9477	germline	1	0.0832843034651679	0.270071132113015
9	12021021	12228654	1	loss	A	-1	germline	1	1.77239218992164e-40	0
9	23363361	23378856	1	loss	A	-1	germline	1	0.000268420754455921	0.000268653131224039
9	29090313	29099610	1	loss	A	-1	germline	1	0.0271198285225601	0.0554085739784547
9	40912998	40916097	7	gain	-	-1	germline	1	0.0832766926004289	0.270057914317355
9	40922295	40925394	6	gain	-	-1	germline	1	0.0832782147283024	0.270060557838709
9	40925394	40928493	7	gain	-	-1	germline	1	0.0832759315449433	0.27005659256376
9	70663398	70691289	2	neutral	AA	62.107	somatic	0	0.163809528268766	0.122855453434728
9	71785236	71946384	2	neutral	AA	61.6158	somatic	0	0.0154342193216743	0.0140971209534042
9	73452498	73564062	2	neutral	AA	19.3488	somatic	0	0.977202361677603	0.56154446466346
9	73911150	73994823	2	neutral	AA	39.9299	somatic	0	0.780766516598739	0.586819002664238
9	80341575	80350872	2	neutral	AA	100	somatic	0	0.442883487859538	0.879965527061562
9	87850452	87862848	2	neutral	AA	27.3457	somatic	0	0.497652072409379	0.666786370145859
9	89139636	89412348	2	neutral	AA	48.2784	somatic	0	0.00735988638698002	0.00853115651633085
9	98545101	98551299	1	loss	A	-1	germline	1	0.0227430651455301	0.0549776214596908
9	98619477	98659764	2	neutral	AA	72.6706	germline	1	0.527761160626588	0.613185225683165
9	101954001	101963298	1	loss	A	-1	germline	1	0.00566400011176667	0.00950273245201894
9	108148902	108173694	2	neutral	AA	100	somatic	0	0.18377364978477	0.41559642017997
9	109410195	109422591	2	neutral	AA	16.0197	somatic	0	0.0969872116839203	0.223734567805686
9	110928705	110950398	2	neutral	AA	100	somatic	0	0.645517547014892	0.906162670017316
9	113094906	113218866	2	neutral	AA	14.766	somatic	0	0.00555857537396137	0.0168344159753262
9	118735086	118797066	2	neutral	AA	42.9888	somatic	0	0.0781376950847408	0.192906867592435
9	119392074	119447856	2	neutral	AA	70.8072	somatic	0	0.0482613145480646	0.0514377672637668
9	120650268	120656466	2	neutral	AA	54.5678	somatic	0	0.15764483862463	0.206843186738315
9	121651245	121660542	2	neutral	AA	100	germline	1	0.0451531011296421	0.178289388551025
9	124152138	124164534	2	neutral	AA	54.5679	somatic	0	0.663913830710782	0.281638802316572
9	128648787	128651886	1	loss	A	-1	germline	1	0.0833063781592881	0.270109466390854
9	129113637	129212805	2	neutral	AA	23.4666	somatic	0	0.651042765086661	0.54235713265656
9	129429735	129439032	3	gain	AAB	0.354883	germline	1	0.00270431640890292	0.00496429844061264
9	129944169	129965862	2	neutral	AA	54.5683	somatic	0	0.0155734961184671	0.0139484637003409
9	136802256	136805355	3	gain	AAB	17.0318	germline	1	0.0833109459290607	0.270117398116586
9	137325987	137329086	6	gain	AAAABB	2.85299	germline	1	0.0832766926004289	0.270057914317355
9	137353878	137356977	3	gain	AAB	14.9601	somatic	0	0.0833048556144462	0.27010682252005
9	137356977	137363175	1	loss	A	-1	somatic	0	0.0263871934115472	0.0532299892630756
9	137713362	137716461	3	gain	AAA	46.5345	somatic	0	0.083303333092145	0.270104178668139
9	138085242	138122430	2	neutral	AA	56.7138	somatic	0	0.624516610351671	0.805953565794133
10	8014014	8020212	2	neutral	AA	100	somatic	0	0.97727679947035	0.998587248884623
10	8627616	8680299	2	neutral	AA	23.9245	somatic	0	0.53778837501064	0.784300688877903
10	20561865	20568063	1	loss	A	-1	germline	1	0.0221698663945352	0.0553195659992761
10	26502648	26679291	2	neutral	AA	9.82064	somatic	0	0.729201445736684	0.668543206083664
10	26936508	26942706	3	gain	AAA	10.5574	germline	1	0.0143231766512817	0.0366679504983409
10	26942706	26964399	2	neutral	AA	2.23028	somatic	0	0.164958709318506	0.0638481929524481
10	37141515	37370841	2	neutral	AA	3.37954	somatic	0	0.968417087216043	0.769700896029403
10	38486481	38489580	4	gain	AAAB	13.7758	germline	1	0.083296482020726	0.270092281568292
10	38489580	38501976	3	gain	AAB	2.96349	germline	1	0.000584052524225088	0.000828692922190011
10	38514372	38526768	3	gain	AAB	0.963449	germline	1	0.000553265380287264	0.000730204235964704
10	38526768	38529867	18	gain	AAAAAAAAAAAAAAAAAB	16.3319	germline	1	0.0832667993185717	0.27004073188896
10	38573253	38582550	3	gain	AAB	2.66686	germline	1	0.00270777976242538	0.00496900426132973
10	38582550	38594946	1	loss	A	-1	germline	1	0.00162512002628264	0.00160350157534783
10	38783985	38836668	3	gain	AAB	0.569468	germline	1	3.04685810048965e-11	8.46500647355697e-12
10	41839599	41842698	2	neutral	AA	65.2492	somatic	0	0.0848966571132058	0.27286000008754
10	41858193	41861292	38	gain	AAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBB	100	germline	1	0.0832652773597176	0.270038088509269
10	42301350	42323043	3	gain	AAB	1.95646	germline	1	4.64895743860231e-06	1.7027795636837e-06
10	46515990	46559376	4	gain	AABB	0.550728	germline	1	1.98051299197453e-09	7.5722095260744e-11
10	49794732	49804029	1	loss	A	-1	germline	1	0.00601810826231678	0.00940737988431972
10	53023890	53033187	1	loss	A	-1	germline	1	0.00704568431437442	0.010092074044314
10	54684954	54709746	4	gain	AAAB	4.7814	germline	1	9.66090729091841e-07	2.25719990476492e-07
10	56919333	56968917	2	neutral	AA	100	somatic	0	0.856382325564144	0.841887876635992
10	62234118	62286801	2	neutral	AA	93.3847	somatic	0	0.174371108835239	0.204407269170537
10	65546949	65556246	1	loss	A	-1	germline	1	0.00482006790863809	0.00882924180284483
10	67331973	67387755	2	neutral	AA	54.5697	somatic	0	0.106672230057457	0.0738125506060059
10	67725546	67728645	1	loss	A	-1	germline	1	0.083271365330346	0.270048662141365
10	72417432	72625065	2	neutral	AA	51.8009	somatic	0	0.868712810389399	0.752860114977422
10	76498815	76501914	1	loss	A	-1	germline	1	0.0832698433038857	0.27004601870501
10	77279763	77422317	2	neutral	AA	69.4978	somatic	0	0.00431556458072153	0.00458284833010014
10	90850284	90856482	2	neutral	AA	100	somatic	0	0.808772308110798	0.992902141414664
10	99406623	99437613	2	neutral	AA	100	somatic	0	0.167582214372912	0.202027768733528
10	103983846	104039628	2	neutral	AA	14.6458	germline	1	0.115677768635784	0.500546573578362
10	111684861	111762336	2	neutral	AA	32.6972	somatic	0	0.860774401416453	0.440880030917536
10	116166015	116234193	2	neutral	AA	100	somatic	0	0.624501841981835	0.585305512205009
10	120467427	120470526	1	loss	A	-1	germline	1	0.0833360722893615	0.270161025646979
10	128462847	128465946	7	gain	AAAABBB	10.5177	germline	1	0.0832766926004289	0.270057914317355
10	131620728	131626926	1	loss	A	-1	germline	1	0.0293216053103709	0.056495794321454
11	870819	908007	2	neutral	AA	26.2822	somatic	0	9.80218740075591e-05	0.00176654876104687
11	4096878	4140264	2	neutral	AA	36.3786	somatic	0	0.690019314311985	0.863313450864837
11	5764140	5788932	1	loss	A	-1	germline	1	6.43840587734621e-06	1.25913193760319e-06
11	9117258	9191634	2	neutral	AA	54.5678	somatic	0	0.189230283658479	0.45985103841873
11	11704923	11974536	2	neutral	AA	54.5682	somatic	0	0.000481473695163071	0.00719856401531016
11	28984947	28991145	1	loss	A	-1	germline	1	0.0214634640537361	0.0550836713403033
11	36307884	36310983	3	gain	AAB	38.4759	somatic	0	0.0833109459290607	0.270117398116586
11	41040057	41049354	2	neutral	AA	100	somatic	0	0.282126374783983	0.564992355646408
11	41436729	41477016	2	neutral	AA	100	somatic	0	0.0197082130170818	0.0193648433610608
11	42301350	42369528	2	neutral	AA	100	somatic	0	0.768452305877515	0.731561411983074
11	42794091	42797190	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
11	45375558	45453033	2	neutral	AA	100	somatic	0	0.151930418614758	0.209706346953091
11	48858834	48861933	1	loss	A	-1	somatic	0	0.123259328192109	0.333776875818293
11	48865032	48942507	2	neutral	AA	44.546	somatic	0	2.1565048905626e-07	2.89973740530414e-06
11	50730630	50811204	2	neutral	AA	3.97747	somatic	0	1.29542888662662e-08	2.87707973489759e-06
11	54542400	54545499	3	gain	AAB	4.89449	somatic	0	0.0832995268850066	0.270097569121001
11	54929775	54935973	6	gain	AAAAAB	100	germline	1	0.014311402191009	0.0366404549400025
11	54935973	54939072	4	gain	AAAB	71.2396	germline	1	0.0832980044415964	0.270094925335202
11	55599159	55685931	1	loss	A	-1	germline	1	8.29589057626153e-16	0
11	61391190	61394289	3	gain	-	-1	germline	1	0.0833322648705548	0.27015441508453
11	63442728	63492312	2	neutral	AA	50.1016	somatic	0	0.918651807254536	0.984205817491379
11	63721638	63730935	2	neutral	AA	54.568	somatic	0	0.236146334196579	0.574269341651883
11	66349590	66380580	2	neutral	AA	100	somatic	0	0.365217847109698	0.631071220366952
11	66941499	66947697	1	loss	A	-1	somatic	0	0.0245350084758566	0.0564842107416278
11	70368993	70372092	3	gain	AAB	25.5082	somatic	0	0.083304094350478	0.270105500591733
11	73071321	73145697	2	neutral	AA	100	somatic	0	0.528663256696156	0.511000700285908
11	76849002	77016348	2	neutral	AA	100	somatic	0	0.679116037246108	0.930589464780748
11	80040972	80084358	2	neutral	AA	54.5873	somatic	0	0.656621973773606	0.300362757602217
11	82393113	82473687	2	neutral	AA	41.5192	somatic	0	0.880428857009745	0.473277541658567
11	82963329	82991220	2	neutral	AA	100	germline	1	0.558525298053205	0.535459242860186
11	83474664	83521149	2	neutral	AA	37.5774	somatic	0	0.730745518254942	0.831227639102575
11	84212226	84233919	2	neutral	AA	100	germline	1	0.16917151181413	0.25106568326265
11	96267336	96270435	1	loss	A	-1	somatic	0	0.0852264804128592	0.273427749187983
11	104396013	104399112	0	loss	-	-1	germline	1	0.0832698433038857	0.27004601870501
11	106915500	106918599	1	loss	A	-1	somatic	0	0.0888230723404424	0.279562958741922
11	107367954	107371053	1	loss	A	-1	somatic	0	0.0972092083612786	0.293469349607303
11	113575251	113916141	2	neutral	AA	11.8815	somatic	0	0.799247098104085	0.836390106207406
11	114873732	114892326	2	neutral	AA	63.582	somatic	0	0.755992634981478	0.951894569291093
11	124421751	124434147	2	neutral	AA	100	somatic	0	0.344653181212207	0.518791640794795
12	2252973	2256072	6	gain	-	-1	germline	1	0.0832820201465858	0.270067166724734
12	18095061	18101259	1	loss	A	-1	germline	1	0.0220729459831761	0.0573405289397796
12	27494328	27503625	1	loss	A	-1	germline	1	0.005798926136519	0.00943242292050084
12	29691519	29694618	1	loss	A	-1	germline	1	0.0834846715656715	0.270418929674379
12	37615662	37624959	1	loss	A	-1	germline	1	0.00718716943217027	0.00947858055774631
12	39710586	39713685	1	loss	A	-1	germline	1	0.0832865868344599	0.2700750975438
12	45508815	45515013	1	loss	A	-1	germline	1	0.0247504966670914	0.0557528224886596
12	54192213	54282084	2	neutral	AA	59.6117	somatic	0	0.425117629579252	0.467756347479231
12	69228561	69253353	2	neutral	AA	100	somatic	0	0.768556033553416	0.395072966423265
12	70477458	70483656	1	loss	A	-1	germline	1	0.0219127251821256	0.0558596360016076
12	70939209	70957803	2	neutral	AA	7.81262	germline	1	0.464448029652949	0.682438390961666
12	72817203	72959757	2	neutral	AA	100	somatic	0	0.602437221742004	0.780156423980877
12	77236377	77298357	2	neutral	AA	54.5728	somatic	0	0.710547267222956	0.863312372265314
12	81745422	81751620	0	loss	-	-1	germline	1	0.0143162070614871	0.0366617986092007
12	82978824	83009814	2	neutral	AA	100	somatic	0	0.555308946691524	0.753221777804231
12	87329820	87484770	2	neutral	AA	64.1266	somatic	0	0.0901761057324571	0.227481758871434
12	87528156	87571542	2	neutral	AA	100	somatic	0	0.782677500238145	0.952616593071441
12	88129362	88147956	2	neutral	AA	100	somatic	0	0.283359775538206	0.257075861940356
12	90091029	90097227	1	loss	A	-1	germline	1	0.0206944406697965	0.0529021894798014
12	107237796	107253291	2	neutral	AA	36.3786	somatic	0	0.178284292330993	0.161148580918698
12	107866893	107931972	2	neutral	AA	100	somatic	0	0.496128278878282	0.762556033628137
12	113113500	113448192	2	neutral	AA	37.7216	somatic	0	0.0766698068441933	0.0462343431696469
12	126473289	126560061	2	neutral	AA	100	somatic	0	0.547851092824999	0.720780298876977
12	130644543	130647642	3	gain	AAB	5.65953	somatic	0	0.083304094350478	0.270105500591733
13	19167315	19179711	2	neutral	AA	54.5678	somatic	0	0.974196173703837	0.999962370893058
13	19796412	19880085	2	neutral	AA	6.17089	somatic	0	0.0190156636274278	0.038089110767842
13	20521578	20595954	2	neutral	AA	12.8081	somatic	0	0.0254830118105587	0.0720295613983931
13	20822181	20868666	2	neutral	AA	54.5678	somatic	0	0.345779325262026	0.78731154394808
13	22018395	22024593	1	loss	A	-1	germline	1	0.019199316955846	0.0499967940835423
13	23645370	23865399	2	neutral	AA	57.4047	somatic	0	0.130988474298162	0.171453246251271
13	26087382	26099778	2	neutral	AA	100	somatic	0	0.137913251173886	0.168669601988609
13	26474757	26477856	1	loss	A	-1	germline	1	0.0832766926004289	0.270057914317359
13	33026043	33047736	2	neutral	AA	54.5678	somatic	0	0.394949393726074	0.252740628721463
13	35957697	35960796	3	gain	AAA	30.5207	germline	1	0.0833048556144462	0.27010682252005
13	37497900	37510296	1	loss	A	-1	germline	1	0.000975009699103522	0.00146420336384168
13	38483382	38486481	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
13	39189954	39261231	2	neutral	AA	36.3964	somatic	0	0.218867288255984	0.252077503236709
13	41275581	41291076	2	neutral	AA	100	somatic	0	0.882137937863461	0.997842092976841
13	43853949	43915929	2	neutral	AA	22.9056	somatic	0	0.527103114198346	0.26526071737767
13	45493320	45511914	2	neutral	AA	37.7507	somatic	0	0.752739826309101	0.853748100972199
13	46330050	46357941	2	neutral	AA	36.3786	somatic	0	0.00764718745243111	0.0440720783046492
13	46649247	46658544	2	neutral	AA	36.9809	somatic	0	0.421109834609646	0.450279948851321
13	47399205	47523165	2	neutral	AA	34.8062	somatic	0	0.163081729822658	0.2657469698834
13	49398060	49540614	2	neutral	AA	100	somatic	0	0.0727029394777078	0.0162667679086788
13	50495106	50501304	1	loss	A	-1	germline	1	0.0214842046249073	0.0558382592301095
13	53659185	53668482	1	loss	A	-1	germline	1	0.0215143180331129	0.0573223981369104
13	55341942	55379130	2	neutral	AA	100	somatic	0	0.967251964070784	0.82574625620154
13	63027462	63058452	3	gain	AAB	0.350468	germline	1	5.16457613246744e-06	1.99862706817822e-06
13	63058452	63064650	3	gain	AAB	1.51384	germline	1	0.0143201721508277	0.0366596275698183
13	63064650	63067749	5	gain	AAABB	0.785387	germline	1	0.0832873479688263	0.270076419363501
13	67527210	67530309	3	gain	AAB	100	somatic	0	0.0833071394401619	0.270110788333333
13	71902998	71906097	1	loss	A	-1	somatic	0	0.0880524871871414	0.278257234690006
13	72910173	72981450	2	neutral	AA	54.5792	somatic	0	0.699572104344274	0.64000669180321
13	72981450	73006242	2	neutral	AA	54.5681	somatic	0	0.0637554803923311	0.0471255193194879
13	73647735	73653933	2	neutral	AA	100	somatic	0	0.650161535349742	0.846009129243606
13	76315974	76334568	2	neutral	AA	55.9062	somatic	0	0.77561122788905	0.413530296669898
13	76963665	77007051	2	neutral	AA	36.3786	somatic	0	0.376063712356862	0.468916430137024
13	78423294	78426393	1	loss	A	-1	somatic	0	0.093316276650707	0.287078276952851
13	81308463	81370443	2	neutral	AA	100	somatic	0	0.043061180988889	0.191757305327581
13	88646895	88711974	2	neutral	AA	54.6088	somatic	0	0.733981762227182	0.867702072071042
13	88811142	88962993	2	neutral	AA	41.1353	somatic	0	0.584622154516876	0.750903003909535
13	94510203	94519500	2	neutral	AA	54.5679	somatic	0	0.493799635545441	0.564547676293804
13	98600883	98607081	1	loss	A	-1	germline	1	0.0223386381867163	0.0565542698944825
13	100655520	100720599	2	neutral	AA	36.3786	somatic	0	0.673783148406654	0.513978063381954
13	101709180	101774259	2	neutral	AA	54.5685	somatic	0	0.4025713821395	0.542662911408989
13	105716187	105731682	2	neutral	AA	100	somatic	0	0.279878129082064	0.163106572879113
14	0	16093107	3	gain	AAB	-1	somatic	0	NA	NA
14	16093107	16096206	4	gain	-	-1	germline	1	0.0832934372466036	0.270086994091139
14	16096206	18488634	3	gain	AAB	-1	somatic	0	NA	NA
14	18491733	18659079	3	gain	AAB	-1	somatic	0	NA	NA
14	18659079	18693168	7	gain	AAAAABB	5.60914	germline	1	0.000532244362507579	0.000671150466103443
14	18693168	19749927	3	gain	AAB	-1	somatic	0	NA	NA
14	19749927	19907976	3	gain	AAB	0.69435	germline	1	4.84060336386528e-16	0
14	19914174	19954461	3	gain	AAB	1.04636	germline	1	9.29393737168959e-09	5.63387003715832e-10
14	20242668	20410014	2	neutral	AA	100	somatic	0	0.0410184710010423	0.0938066923011136
14	21482268	21488466	1	loss	A	-1	somatic	0	0.0253701532980107	0.0519561520696703
14	37299564	37302663	1	loss	A	-1	somatic	0	0.0833680601707378	0.270216559032614
14	39298419	39313914	2	neutral	AA	89.6031	somatic	0	0.995487005700758	0.961582787907866
14	41142324	41201205	1	loss	A	-1	germline	1	2.3550147182011e-11	7.56839035886969e-13
14	62438652	62447949	2	neutral	AA	100	somatic	0	0.597229108967597	0.852907918431957
14	62745453	63008868	2	neutral	AA	100	somatic	0	0.000445425189030538	0.00709098094045679
14	65240148	65246346	1	loss	A	-1	somatic	0	0.0263487887642726	0.0566048853098202
14	72804807	72841995	2	neutral	AA	45.7537	somatic	0	0.305260563578614	0.302276852747301
14	77422317	77887167	2	neutral	AA	23.9194	somatic	0	0.776700504435551	0.752272008369387
14	79641201	79647399	1	loss	A	-1	germline	1	0.0186874716331426	0.0474409928145149
14	82030530	82036728	1	loss	A	-1	somatic	0	0.0282344552119076	0.0563164781234989
14	90410226	90509394	2	neutral	AA	82.2295	somatic	0	0.0230559777935585	0.094896884476375
14	96149574	96158871	2	neutral	AA	36.386	somatic	0	0.632030515571386	0.922720979476267
14	99419019	99422118	3	gain	AAB	46.4428	somatic	0	0.0833330263430437	0.270155737187574
14	99927255	99930354	5	gain	AAABB	11.4182	somatic	0	0.0832843034651679	0.270071132113015
14	101343498	101399280	2	neutral	AA	55.6525	somatic	0	0.275205764066896	0.482716749176915
14	101826942	101885823	2	neutral	AA	36.3786	somatic	0	0.579167339443641	0.774532597784405
14	105347406	105366000	2	neutral	AA	38.8171	germline	1	0.00447032567575067	0.0128595655389857
15	0	20338737	6	gain	-	-1	somatic	0	0.479804055115002	0.723425902099499
15	20338737	20341836	14	gain	-	-1	germline	1	0.0832675603064494	0.270042053585888
15	20341836	20667231	6	gain	-	-1	germline	1	9.14553572631012e-11	1.38544731242973e-12
15	20667231	20670330	4	gain	-	-1	germline	1	0.0832919148933512	0.270084350380896
15	20670330	20673429	6	gain	-	-1	germline	1	0.0832804979623696	0.270064523156157
15	22226028	22272513	4	gain	AAAB	2.99368	germline	1	0.000107674097716778	9.0895138517344e-05
15	22780749	22799343	2	neutral	AA	100	germline	1	0.187906586825808	0.145484710283074
15	27268101	27302190	2	neutral	AA	100	somatic	0	0.988468299750784	0.495259327934857
15	35099274	35105472	2	neutral	AA	54.5678	somatic	0	0.787053962470813	0.661115704447909
15	53116860	53181939	2	neutral	AA	100	germline	1	0.33250180320303	0.412959147713098
15	57687885	57690984	1	loss	A	-1	germline	1	0.105929329345697	0.307411777188144
15	60470787	60489381	2	neutral	AA	55.1503	somatic	0	0.498047761517036	0.830330577153136
15	63061551	63067749	2	neutral	AA	100	germline	1	0.0680012418365968	0.210345508524052
15	63111135	63151422	2	neutral	AA	54.5683	germline	1	0.982395874532566	0.343075278279683
15	65522157	65528355	1	loss	A	-1	somatic	0	0.0271938908308381	0.0559880444939352
15	67899090	67917684	2	neutral	AA	92.6493	somatic	0	0.266169676016626	0.521007805981439
15	68199693	68233782	2	neutral	AA	100	somatic	0	0.129426853582138	0.106729779371889
15	69420699	69445491	2	neutral	AA	54.5678	somatic	0	0.900457569790652	0.784110682170934
15	75039186	75104265	2	neutral	AA	84.1002	somatic	0	0.355658331099898	0.271249276958274
15	76591785	76601082	1	loss	A	-1	germline	1	0.0051021833858267	0.00914150066629804
15	99874572	99880770	1	loss	A	-1	germline	1	0.0270481387844914	0.0577100796758144
16	1022670	1025769	5	gain	AAAAA	4.21694	germline	1	0.0832865868344599	0.270075097543796
16	1735440	1763331	2	neutral	AA	100	somatic	0	0.617139129648649	0.372688390968999
16	5633982	5661873	2	neutral	AA	9.55634	somatic	0	0.351967678298365	0.416801075969017
16	6607068	6634959	3	gain	AAB	2.36472	germline	1	2.06187958144438e-07	3.18348487571285e-08
16	7245462	7391115	2	neutral	AA	100	somatic	0	0.338545450500837	0.0783332100838139
16	10294878	10319670	2	neutral	AA	27.9173	somatic	0	0.450267779794547	0.701938914887769
16	11642943	11649141	2	neutral	AA	100	somatic	0	0.0570668614474659	0.0973210380891594
16	19539195	19560888	2	neutral	AA	37.5132	somatic	0	0.812964168516033	0.799820253903523
16	21559743	21581436	3	gain	AAB	5.27001	germline	1	4.61348272562902e-06	1.67068729095554e-06
16	22613403	22700175	3	gain	AAB	0.998942	germline	1	2.30410059243131e-19	0
16	23747637	23750736	1	loss	A	-1	germline	1	0.0834549345547858	0.270367334501965
16	25294038	25328127	2	neutral	AA	100	somatic	0	0.725674064955635	0.715545772542396
16	25328127	25334325	1	loss	A	-1	germline	1	0.0203547367637367	0.0553335300364299
16	28603770	28606869	3	gain	AAB	4.59568	germline	1	0.083342164452543	0.270171602792454
16	31241019	31275108	2	neutral	AA	77.9646	somatic	0	0.202687831871221	0.386757768388278
16	31275108	31337088	2	neutral	AA	89.6548	somatic	0	0.364535880268412	0.68894103225714
16	34061109	34064208	25	gain	AAAAAAAAAAAAAAAAABBBBBBBB	100	germline	1	0.0832660383363278	0.270039410196754
16	34082802	34085901	14	gain	AAAAAAAAAABBBB	100	germline	1	0.0832675603064494	0.270042053585888
16	34085901	34095198	2	neutral	AA	12.6244	germline	1	0.0856027421897403	0.231645793338049
16	34095198	34098297	10	gain	AAAAAAABBB	4.93138	germline	1	0.0832675603064494	0.270042053585888
16	34098297	34101396	4	gain	AAAA	4.94656	germline	1	0.0832980044415964	0.270094925335202
16	34101396	34160277	2	neutral	AA	2.5479	germline	1	0.033311720268444	0.10738479683861
16	34160277	34212960	3	gain	AAB	0.47625	somatic	0	0.000110600042564367	9.86460786289722e-05
16	34243950	34256346	3	gain	-	-1	germline	1	0.000533061057257856	0.00067213161948021
16	34618929	34625127	3	gain	-	-1	germline	1	0.014317648800089	0.03664913579844
16	34625127	34959819	2	neutral	AA	0.930899	germline	1	6.14513583321647e-13	1.35855771077331e-11
16	35086878	35096175	2	neutral	AA	100	somatic	0	0.0512338700952443	0.146395061134813
16	35979390	36087855	2	neutral	AA	4.83807	germline	1	2.00041464343563e-06	1.48204973537958e-05
16	36121944	36125043	4	gain	-	-1	germline	1	0.0832903925626376	0.270081706689542
16	46401327	46404426	37	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8.27193	germline	1	0.0832652773597176	0.270038088509269
16	46404426	46423020	2	neutral	AA	1.73545	germline	1	2.68333492779002e-05	1.84451855638201e-05
16	48474558	48477657	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
16	55459704	55472100	2	neutral	AA	100	somatic	0	0.171713711956517	0.248015815117677
16	57291213	57294312	1	loss	A	-1	somatic	0	0.0897344028151225	0.281097557392395
16	58007082	58028775	2	neutral	AA	100	somatic	0	0.710829682032571	0.895440329886718
16	61766169	61976901	2	neutral	AA	88.1632	somatic	0	0.802873301771739	0.619616329139245
16	70148964	70161360	3	gain	AAB	3.63237	germline	1	0.000533162696746487	0.000671932628444338
16	72578580	72742827	2	neutral	AA	27.2839	somatic	0	0.0946747796567683	0.079058131434436
16	77942949	78255948	2	neutral	AA	8.26572	somatic	0	0.115746715090297	0.0858904202854917
16	82244361	82262955	2	neutral	AA	100	somatic	0	0.358058805541768	0.821893166267753
16	84466344	84472542	1	loss	A	-1	germline	1	0.0207128712027378	0.055645145197129
17	607404	663186	2	neutral	AA	100	germline	1	0.00609392404005759	0.00896983537698315
17	4211541	4298313	2	neutral	AA	100	germline	1	0.145233686430967	0.0758941717718642
17	5943882	5965575	2	neutral	AA	100	somatic	0	0.904320111290182	0.967311172157651
17	14661369	14683062	2	neutral	AA	100	germline	1	0.939713583161959	0.364666804413957
17	18349179	18860514	2	neutral	AA	27.2854	somatic	0	0.0177733090519186	0.0239432497537906
17	21290130	21302526	4	gain	AABB	0.279453	germline	1	0.000532735085770465	0.000671601099447527
17	21358308	21373803	2	neutral	AA	100	somatic	0	0.267579267630364	0.71016592877779
17	21854148	21857247	5	gain	-	-1	germline	1	0.0832858257057281	0.270073775728813
17	21857247	21885138	3	gain	-	-1	germline	1	2.06200588387704e-07	3.18376736085924e-08
17	21975009	21978108	23	gain	-	-1	germline	1	0.0832660383363278	0.270039410196754
17	21978108	22157850	6	gain	AAAABB	0.423616	somatic	0	9.14567422171474e-11	1.38589140163958e-12
17	22157850	22160949	3	gain	AAB	2.63466	germline	1	0.0833109459290607	0.270117398116586
17	26781558	26784657	4	gain	-	-1	germline	1	0.0832919148933512	0.270084350380896
17	26784657	26803251	3	gain	-	-1	germline	1	2.2831194117992e-05	1.37695181237074e-05
17	26803251	26818746	4	gain	-	-1	germline	1	0.000532739317975693	0.000671786736788249
17	26821845	26828043	4	gain	-	-1	germline	1	0.0143152459735671	0.0366462419790445
17	26828043	26843538	3	gain	-	-1	germline	1	0.000108187172934453	9.15839564216148e-05
17	26843538	26846637	1	loss	A	-1	somatic	0	0.11781878936912	0.325676432092567
17	26846637	26865231	3	gain	-	-1	germline	1	0.000303023808959159	0.00186537486424998
17	26865231	26868330	7	gain	-	-1	germline	1	0.0832759315449433	0.27005659256376
17	26868330	26877627	3	gain	-	-1	germline	1	0.00270742885874782	0.00496907782221145
17	26936508	26939607	17	gain	AAAAAAAAAAABBBBBB	7.52404	germline	1	0.0832667993185717	0.27004073188896
17	31389771	31399068	2	neutral	AA	100	somatic	0	0.748362366144404	0.937555401139317
17	41631966	41650560	2	neutral	AA	8.91243	somatic	0	0.917118024243308	0.977272061452359
17	48412578	48428073	2	neutral	AA	100	somatic	0	0.0103111361664145	0.0102924337751346
17	66795846	66802044	6	gain	AAAAAA	7.32653	germline	1	0.0143111619848311	0.0366411782761533
17	72776916	72817203	2	neutral	AA	100	germline	1	0.153997554478488	0.40305792853794
17	77313852	77416119	2	neutral	AA	11.6513	somatic	0	0.0262204721052456	0.0562411355919271
17	82585251	82588350	5	gain	AAABB	11.234	germline	1	0.0832858257057281	0.270073775728813
18	5305488	5308587	1	loss	A	-1	germline	1	0.0836014150284681	0.270621410879944
18	5324082	5327181	1	loss	A	-1	germline	1	0.0838506034861562	0.271053210248069
18	44077077	44080176	1	loss	A	-1	somatic	0	0.11274388681976	0.317978052906992
18	50169711	50172810	1	loss	A	-1	somatic	0	0.120446841638009	0.329607872729773
18	53587908	53591007	3	gain	AAB	59.2196	somatic	0	0.0833177979641121	0.270129296023948
18	57021600	57024699	3	gain	AAB	78.1854	germline	1	0.0833109459290607	0.270117398116586
18	59999739	60024531	2	neutral	AA	100	somatic	0	0.271445248757737	0.597432675094212
18	60470787	60483183	2	neutral	AA	100	germline	1	0.466804266209567	0.844174589123725
18	62627691	62686572	2	neutral	AA	57.443	somatic	0	0.867708216920692	0.477724406442827
18	63070848	63104937	2	neutral	AA	100	somatic	0	0.0717771011232716	0.21576846525041
18	65001525	65131683	2	neutral	AA	100	somatic	0	0.916628053745353	0.807940256154697
18	65531454	65534553	3	gain	AAB	88.3141	germline	1	0.0833459722377187	0.270178213661859
18	65534553	65537652	4	gain	AAAB	87.2311	germline	1	0.08329267606716	0.270085672233656
18	65537652	65540751	3	gain	AAB	100	germline	1	0.0833238890451603	0.270139872262724
18	66055185	66064482	1	loss	A	-1	germline	1	0.0062070053150671	0.00967066374785042
18	72674649	72742827	2	neutral	AA	11.021	somatic	0	0.0595995323390275	0.0466644186734283
18	74614623	74617722	3	gain	-	-1	germline	1	0.0833147525588449	0.270124008017897
18	74667306	74673504	2	neutral	AA	15.9094	germline	1	0.369514724951757	0.329339274160297
18	78178473	78187770	2	neutral	AA	100	somatic	0	0.129772922482859	0.404445160332126
18	79198044	79201143	5	gain	AAABB	19.6157	germline	1	0.0832858257057281	0.270073775728813
18	79520340	79523439	1	loss	A	-1	germline	1	0.114542616806613	0.320723233499324
19	3210564	3253950	2	neutral	AA	6.6127	somatic	0	0.0240965921893711	0.00550621868886447
19	3368613	3374811	2	neutral	AA	100	somatic	0	0.541665467518146	0.629947538424871
19	5968674	6070941	2	neutral	AA	100	somatic	0	0.984985275255422	0.890716598537203
19	7449996	7453095	10	gain	AAAAAABBBB	31.8225	germline	1	0.0832675603064494	0.270042053585888
19	8419983	8522250	2	neutral	AA	38.8287	germline	1	0.045909787923571	0.0950170922872177
19	8881734	8968506	2	neutral	AA	1.62825	somatic	0	0.691139425709435	0.475566199579456
19	12581940	12585039	1	loss	A	-1	germline	1	0.104633312991958	0.305370656900485
19	12585039	12588138	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
19	12588138	12591237	2	neutral	AA	100	somatic	0	0.331155837045498	0.576127644966517
19	17379192	17478360	2	neutral	AA	37.7116	germline	1	0.00055070528326761	0.00287085398017706
19	22957392	22960491	0	loss	-	-1	germline	1	0.0832675603064494	0.270042053585892
19	24330249	24351942	3	gain	AAB	0.852594	germline	1	4.60746202743073e-06	1.66751609331772e-06
19	24351942	24389130	4	gain	AABB	0.639952	germline	1	1.98019700437244e-09	7.57042206700476e-11
19	27336279	27342477	4	gain	AAAB	10.1088	germline	1	0.0143165674841311	0.0366494975399219
19	27345576	27379665	6	gain	AAAABB	0.145216	germline	1	4.32647124885451e-08	4.12658207604721e-09
19	27379665	27382764	3	gain	AAB	6.11822	germline	1	0.083328457592653	0.270147804640145
19	27382764	27398259	6	gain	AAAABB	0.236612	germline	1	0.000107593029438692	9.08659842739912e-05
19	27398259	27401358	3	gain	AAB	2.76279	germline	1	0.0833223662410835	0.270137228174696
19	27401358	27407556	2	neutral	AA	85.9099	germline	1	0.0234483641439142	0.0513187345119536
19	28520097	28994244	2	neutral	AA	2.73264	somatic	0	0.0560738936891163	0.146237485483006
19	29511777	29514876	1	loss	A	-1	germline	1	0.0833353107943276	0.270159703525045
19	29889855	29936340	2	neutral	AA	100	somatic	0	0.0491037039867518	0.129294564128731
19	35350293	35356491	2	neutral	AA	54.5678	somatic	0	0.387709799323101	0.692434461816192
19	37008258	37020654	1	loss	A	-1	germline	1	0.00165614927999198	0.0014980082225825
19	40287000	40401663	2	neutral	AA	100	somatic	0	0.000332745530091349	0.000239258917972829
19	43463475	43472772	2	neutral	AA	100	germline	1	0.267573073443049	0.562308297362452
19	43472772	43519257	2	neutral	AA	13.5847	germline	1	0.298603816852099	0.573398599150718
19	46491198	46525287	2	neutral	AA	15.9596	somatic	0	0.334218815999829	0.254951665855353
19	47454987	47712204	2	neutral	AA	100	somatic	0	1.34387347709877e-06	5.14371849369422e-06
19	52847247	52899930	2	neutral	AA	7.0701	germline	1	0.0281992334326918	0.165708184340058
19	58326279	58351071	2	neutral	AA	18.1901	somatic	0	0.400799896498165	0.563880380124999
20	65079	68178	5	gain	-	-1	germline	1	0.0832827812471454	0.270068488516105
20	1837707	1877994	2	neutral	AA	66.1679	somatic	0	0.050991304110555	0.230868852176508
20	5906694	5912892	2	neutral	AA	100	somatic	0	0.876640558590406	0.993672744891861
20	7059522	7136997	2	neutral	AA	100	somatic	0	0.646646817270185	0.908882022340845
20	7762995	7862163	2	neutral	AA	62.6606	somatic	0	0.3095831617228	0.650455362135122
20	8435478	8438577	2	neutral	AA	100	somatic	0	0.863332403789776	0.923145274578324
20	9526326	9535623	2	neutral	AA	100	somatic	0	0.865957789267629	0.993002159753334
20	11128509	11162598	2	neutral	AA	100	somatic	0	0.0495474688115696	0.0412010228783584
20	13009602	13012701	2	neutral	AA	100	somatic	0	0.580036517794045	0.776843080257195
20	14289489	14298786	1	loss	A	-1	germline	1	0.00631785471646006	0.00949941158216494
20	15442317	15451614	2	neutral	AA	100	somatic	0	0.699000876651857	0.802094683982786
20	19576383	19579482	2	neutral	AA	100	somatic	0	0.737769664886417	0.86869612332012
20	21305625	21308724	0	loss	-	-1	germline	1	0.0832667993185717	0.270040731888964
20	25749591	26288817	2	neutral	AA	1.75689	somatic	0	0.517184769242388	0.661224043934291
20	26288817	26381787	2	neutral	AA	1.96946	somatic	0	1.34660575420432e-10	1.36404776363008e-10
20	28780413	28786611	9	gain	-	-1	germline	1	0.0143076793948851	0.0366350303170924
20	28802106	28873383	9	gain	-	-1	somatic	0	2.03637880824794e-07	3.049989927284e-08
20	29263857	29270055	4	gain	-	-1	germline	1	0.0143148855802706	0.0366447951443175
20	29276253	29279352	4	gain	-	-1	germline	1	0.0832919148933512	0.270084350380896
20	29279352	29285550	3	gain	-	-1	germline	1	0.0143441033818347	0.0367077786732394
20	29285550	29307243	4	gain	-	-1	germline	1	0.000107723104393629	9.09467408718445e-05
20	29889855	29892954	6	gain	-	-1	germline	1	0.0832774536615486	0.270059236075671
20	31163544	31169742	4	gain	-	-1	germline	1	0.0143165674841311	0.0366494975399219
20	31182138	31188336	17	gain	-	-1	germline	1	0.0143070790239073	0.0366339454768356
20	31188336	31191435	5	gain	-	-1	germline	1	0.0832858257057281	0.270073775728813
20	31191435	31241019	3	gain	AAB	1.31894	germline	1	2.25155647027888e-05	1.2831632620891e-05
20	31241019	31244118	51	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBB	100	germline	1	0.0832652773597176	0.270038088509269
20	31244118	31247217	3	gain	AAA	14.1037	germline	1	0.0834160606394825	0.270299874731123
20	34863750	34894740	2	neutral	AA	100	somatic	0	0.109789973404789	0.440685805740822
20	36747942	36751041	2	neutral	AA	100	germline	1	0.465681451525103	0.693573065399301
20	43212456	43258941	2	neutral	AA	28.8553	somatic	0	0.651261438771605	0.611253714540084
20	43643217	43646316	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
20	44523333	44610105	2	neutral	AA	54.5693	somatic	0	0.362571187598766	0.513681245901837
20	45917883	46054239	2	neutral	AA	36.4298	somatic	0	0.416220115059971	0.357200114445429
20	48930111	49165635	2	neutral	AA	28.0917	somatic	0	0.0565677671787721	0.0303634180801809
20	49181130	49221417	2	neutral	AA	54.5678	somatic	0	0.360098589198601	0.256682000663311
20	49769940	49785435	2	neutral	AA	38.912	germline	1	0.557587216738092	0.719812986792396
20	51929943	51939240	2	neutral	AA	54.5678	somatic	0	0.440066026022604	0.727207745399244
20	53467047	53504235	2	neutral	AA	24.7231	somatic	0	0.108481934806294	0.363603946377389
20	53668482	53674680	1	loss	A	-1	somatic	0	0.0216973279429387	0.0496320792802121
20	53835828	53854422	2	neutral	AA	23.6346	somatic	0	0.2054172198309	0.239013972186947
20	63027462	63061551	2	neutral	AA	100	somatic	0	0.00026107022394966	0.00503079801137296
20	63929271	64022241	2	neutral	AA	34.2576	germline	1	0.387963949473304	0.282220072044443
20	64087320	64090419	4	gain	AAAB	78.0105	germline	1	0.0832980044415964	0.270094925335202
21	8990199	8996397	9	gain	AAAAAABBB	8.88647	somatic	0	0.0143076793948851	0.0366339454768356
21	10691550	10694649	49	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBB	100	germline	1	0.0832652773597176	0.270038088509269
21	10694649	10703946	6	gain	AAAABB	8.93916	germline	1	0.00270127288193981	0.00495930298244973
21	10703946	10738035	7	gain	AAAAABB	0.425253	germline	1	9.22835311033623e-09	5.58545210083139e-10
21	15587970	15609663	2	neutral	AA	100	somatic	0	0.706026070380654	0.611197663565758
21	15609663	15612762	3	gain	-	-1	somatic	0	0.0837825139077651	0.270935276546426
21	20586657	20589756	1	loss	A	-1	germline	1	0.0835228084917356	0.270485087840318
21	20750904	20760201	2	neutral	AA	100	somatic	0	0.306684998998759	0.395675785743421
21	25603938	25718601	2	neutral	AA	42.0923	somatic	0	0.441602829478645	0.525327815041216
21	26013006	26047095	2	neutral	AA	100	somatic	0	0.836362737378811	0.802586716575634
21	29697717	29734905	2	neutral	AA	54.5678	somatic	0	0.498312902332738	0.334004776769687
21	34776978	34792473	2	neutral	AA	100	somatic	0	0.536973612572632	0.628526951101717
21	35839935	35858529	2	neutral	AA	100	somatic	0	0.886107203706383	0.99433501987298
21	38405907	38412105	2	neutral	AA	58.0998	somatic	0	0.334109004471174	0.796582232570592
21	39549438	39568032	2	neutral	AA	54.5678	somatic	0	0.552334616503602	0.572466769852224
21	40603098	40655781	2	neutral	AA	54.5678	somatic	0	0.597355401823627	0.685953829838551
21	41439828	41446026	2	neutral	AA	22.5436	germline	1	0.726248560304787	0.65801097629991
21	41805510	41808609	4	gain	AAAB	100	germline	1	0.0832980044415964	0.270094925335202
21	43262040	43265139	4	gain	AAAB	36.134	germline	1	0.0832919148933512	0.270084350380896
21	44597709	44619402	2	neutral	AA	21.835	somatic	0	0.0017361942836787	0.0035148920030339
22	10725639	10731837	10	gain	-	-1	germline	1	0.0143073191696316	0.0366335838696628
22	16557957	16564155	2	neutral	AA	9.30703	germline	1	0.036849316894085	0.106550324155276
22	16564155	16567254	2	neutral	AA	10.8533	germline	1	0.339685306440586	0.584307779326784
22	17159163	17162262	2	neutral	AA	100	germline	1	0.145845242645755	0.365934132570255
22	17875032	17878131	3	gain	AAB	9.4687	somatic	0	0.0833147525588449	0.270124008017897
22	18138447	18141546	3	gain	AAB	15.4644	somatic	0	0.0833048556144462	0.27010682252005
22	18730356	18733455	67	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABB	33.9716	germline	1	0.0832652773597176	0.270038088509269
22	19071246	19077444	2	neutral	AA	36.3786	somatic	0	0.202437399413067	0.251665839363814
22	20248866	20298450	2	neutral	AA	4.62086	somatic	0	0.101441440885965	0.0505171985041719
22	20546370	20561865	2	neutral	AA	54.6553	somatic	0	0.482345770976236	0.6775580481268
22	22346889	22356186	2	neutral	AA	2.03162	germline	1	0.173273335290186	0.551933829534615
22	23037966	23041065	2	neutral	AA	100	somatic	0	0.12979723076073	0.343331298969276
22	24540981	24565773	2	neutral	AA	100	somatic	0	0.531572166722283	0.618662993786505
22	24788901	24810594	2	neutral	AA	100	somatic	0	0.0979106464522635	0.143850262596341
22	27621387	27677169	2	neutral	AA	24.0239	germline	1	0.35558939430415	0.125481814926406
22	29059323	29118204	2	neutral	AA	54.5734	somatic	0	0.0557221995787173	0.0904209570945932
22	29118204	29121303	4	gain	AAAB	41.272	germline	1	0.0832980044415964	0.270094925335202
22	31330890	31333989	2	neutral	AA	100	somatic	0	0.227009167466881	0.467232189170541
22	32480619	32493015	2	neutral	AA	54.5728	somatic	0	0.147595646039454	0.27031376198857
22	33363834	33376230	2	neutral	AA	36.3786	somatic	0	0.641389479037838	0.860443953546474
22	33658239	33667536	2	neutral	AA	54.5678	somatic	0	0.146752802323806	0.124331863434959
22	34467078	34470177	1	loss	A	-1	germline	1	0.0868053481005102	0.276132927586236
22	34876146	34879245	2	neutral	AA	100	germline	1	0.774888126772642	0.886524724058172
22	40900602	40916097	2	neutral	AA	54.5681	somatic	0	0.165800922900654	0.205834441916668
22	42319944	42326142	2	neutral	AA	100	somatic	0	0.0586168279015292	0.184053164572453
22	43491366	43506861	2	neutral	AA	95.7692	somatic	0	0.776291706565445	0.800665345450232
22	45325974	45329073	3	gain	AAB	8.4553	germline	1	0.0833216048474988	0.270135906137765
22	46302159	46323852	2	neutral	AA	54.568	somatic	0	0.5639730494578	0.930493595691729
22	46627554	46649247	2	neutral	AA	10.5304	germline	1	0.529799235532448	0.870311979340571
22	49571604	49580901	2	neutral	AA	28.5996	somatic	0	0.419477630926975	0.856108177031327
22	50640759	50646957	3	gain	AAB	6.13314	germline	1	0.0143303897211661	0.0366842392705358
X	3523563	3526662	2	gain	-	-1	somatic	0	0.662186434803934	0.827942978187254
X	26084283	26087382	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
X	50055048	50058147	2	gain	-	-1	somatic	0	0.282041591039833	0.527099154903787
X	50225493	50228592	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
X	58487427	58490526	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
X	62506830	62516127	2	gain	AA	6.4748	somatic	0	0.0946615115248521	0.227132923213129
X	63250590	63259887	3	gain	AAA	100	germline	1	0.00270574071587371	0.00496635673429002
X	63269184	63284679	2	gain	-	-1	germline	1	0.253796538338641	0.249551758634485
X	77865474	77868573	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
X	79665993	79672191	0	loss	-	-1	germline	1	0.0143082797880866	0.0366379233618616
X	131871747	131874846	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
X	141788547	141791646	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
X	145340001	145343100	0	loss	-	-1	germline	1	0.0832652773597176	0.270038088509273
Y	3845859	3852057	2	gain	-	-1	germline	1	0.23185424220704	0.537753188086645
Y	10623372	10626471	2	gain	AA	28.1979	germline	1	0.429705637196361	0.664344293947035
Y	10654362	10657461	9	gain	-	-1	germline	1	0.0832706043142989	0.270047340420823
Y	10660560	10663659	3	gain	-	-1	germline	1	0.0833071394401619	0.270110788333333
Y	10666758	10669857	5	gain	-	-1	germline	1	0.0832850645826308	0.270072453918553
Y	10685352	10688451	4	gain	-	-1	germline	1	0.0832980044415964	0.270094925335202
Y	10747332	10753530	3	gain	-	-1	germline	1	0.0144671387095799	0.0370719577679873
Y	10753530	10756629	5	gain	-	-1	germline	1	0.0832873479688263	0.270076419363501
Y	10756629	10759728	3	gain	-	-1	germline	1	0.0836884862748156	0.270772351118001
Y	10759728	10765926	6	gain	-	-1	germline	1	0.0143108016822326	0.0366404549400025
Y	10765926	10775223	3	gain	-	-1	germline	1	0.00270585030633456	0.00496907782221145
Y	10775223	10778322	5	gain	-	-1	germline	1	0.0832873479688263	0.270076419363501
Y	10778322	10784520	2	gain	-	-1	germline	1	0.880971660518506	0.708208544562199
Y	10784520	10790718	4	gain	-	-1	germline	1	0.0143168077703406	0.03664913579844
Y	10790718	10793817	3	gain	-	-1	germline	1	0.0835357782601949	0.270507584306635
Y	10793817	10796916	5	gain	-	-1	germline	1	0.0832843034651679	0.270071132113015
Y	10796916	10803114	4	gain	-	-1	germline	1	0.0143168077703406	0.0366509445370892
Y	10803114	10806213	2	gain	-	-1	germline	1	0.162525778619478	0.388393009447747
Y	10806213	10809312	4	gain	-	-1	germline	1	0.0832911537251771	0.270083028532858
Y	10812411	10821708	2	gain	-	-1	germline	1	0.721052878970835	0.66100977039144
Y	10821708	10827906	3	gain	-	-1	germline	1	0.0143198116481348	0.0366531151265614
Y	10827906	10843401	2	gain	-	-1	germline	1	0.688946043092888	0.57554298114682
Y	10843401	10846500	3	gain	-	-1	germline	1	0.0833002881151641	0.270098891020984
Y	10846500	10877490	2	gain	-	-1	germline	1	0.973978257016666	0.47333258164816
Y	10877490	10896084	3	gain	-	-1	germline	1	0.000456421076840088	0.00334087167379382
Y	10923975	10927074	5	gain	-	-1	germline	1	0.0832843034651679	0.270071132113015
Y	10927074	10933272	2	gain	-	-1	germline	1	0.41300479144613	0.69995359076404
Y	10933272	10936371	5	gain	-	-1	germline	1	0.0832843034651679	0.270071132113015
Y	10936371	10954965	2	gain	-	-1	germline	1	8.1635692434525e-05	0.000109121318994321
Y	10958064	10961163	4	gain	-	-1	germline	1	0.0832919148933512	0.270084350380896
Y	10970460	10976658	3	gain	-	-1	germline	1	0.0143218546025832	0.0366610749169074
Y	10976658	10979757	2	gain	-	-1	germline	1	0.125488859166852	0.337053841236875
Y	10979757	10985955	3	gain	-	-1	germline	1	0.0143307504587545	0.0366686743093788
Y	10985955	10989054	16	gain	-	-1	germline	1	0.0832675603064494	0.270042053585888
Y	10989054	10998351	2	gain	-	-1	germline	1	0.0293063305321464	0.146508748694378
Y	10998351	11001450	7	gain	-	-1	germline	1	0.0832751704950919	0.270055270814889
Y	11004549	11010747	2	gain	-	-1	germline	1	0.0919502441289516	0.142183343847658
Y	11013846	11016945	17	gain	-	-1	germline	1	0.0832667993185717	0.27004073188896
Y	11016945	11020044	2	gain	-	-1	germline	1	0.139921746558581	0.357711575034011
Y	11020044	11023143	4	gain	-	-1	germline	1	0.0832949596223951	0.270089637820271
Y	11029341	11041737	2	gain	AA	15.467	germline	1	0.210677740061831	0.165093635325409
Y	11292756	11308251	27	gain	AAAAAAAAAAAAAAAAABBBBBBBBBB	10.7522	germline	1	0.000107518767445821	9.08077024357468e-05
Y	11314449	11333043	8	gain	AAAAABBB	1.90971	germline	1	0.00270044138355924	0.00495871558452865
Y	11528280	11531379	3	gain	AAA	100	germline	1	0.0833375952963383	0.27016366990501
Y	11642943	11646042	16	gain	-	-1	germline	1	0.0832675603064494	0.270042053585888
Y	11686329	11689428	4	gain	AAAA	6.93412	germline	1	0.0832995268850066	0.270097569121001
Y	11689428	11692527	7	gain	AAAAABB	100	germline	1	0.0832766926004289	0.270057914317355
Y	11717319	11720418	3	gain	AAA	36.5544	germline	1	0.0833010493509568	0.270100212925689
Y	11720418	11723517	40	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBB	67.4257	germline	1	0.0832652773597176	0.270038088509269
Y	11723517	11729715	2	gain	AB	34.1263	germline	1	0.0311539078705331	0.0585991606924556
Y	11729715	11745210	3	gain	AAB	7.55147	germline	1	0.0811401443072892	0.0547592974055524
Y	11745210	11748309	8	gain	AAAAABBB	9.17484	germline	1	0.0832728873793423	0.270051305596606
Y	26635905	26642103	4	gain	AABB	6.23525	germline	1	0.0143145251949776	0.0366440717456959
Y	26651400	26654499	2	gain	AB	32.3615	germline	1	0.286251237686948	0.531506517169045
Y	56826363	56829462	16	gain	AAAAAAAAAABBBBBB	11.1517	germline	1	0.0832675603064494	0.270042053585888
Y	56829462	56835660	41	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBB	36.9812	germline	1	0.0143061184765666	0.0366314142922073
Y	56835660	56851155	9	gain	AAAAAABBB	0.946128	germline	1	0.000532159797631654	0.000671150466103443
