chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	1362623	1545625	2	neutral	AA	7.66764	somatic	0	0.886354957139801	0.84279813633413
1	5670589	5673062	4	gain	AABB	1.02765	germline	1	0.0832820067112023	0.270067280492054
1	9258912	9342994	3	gain	AAB	0.676871	germline	1	3.01830718869939e-23	0
1	13603973	13833962	2	neutral	AA	36.3786	somatic	0	0.290334364497648	0.15988459768153
1	15824727	15829673	0	loss	-	-1	germline	1	0.0143235857776071	0.0366809426082213
1	15995364	16064608	2	neutral	AA	18.1965	somatic	0	0.546215101817631	0.613626677998415
1	16502329	16504802	2	neutral	AA	100	somatic	0	0.180570848109471	0.41159251947884
1	16611141	16623506	8	gain	AAAAABBB	5.6836	germline	1	0.000532198140000306	0.000671093228204689
1	16883171	16942523	4	gain	AABB	3.54345	germline	1	9.23657304898667e-09	5.58938673123066e-10
1	17123052	17140363	2	neutral	AA	54.5678	somatic	0	0.752891393017514	0.24983576128118
1	31429357	31434303	3	gain	AAA	16.0047	germline	1	0.0143141584540083	0.0366459561088419
1	35124019	35151222	2	neutral	AA	100	somatic	0	0.699573268846769	0.701339222254199
1	43727586	43987251	2	neutral	AA	33.1625	somatic	0	0.597633674993552	0.488489717237045
1	54240309	54252674	2	neutral	AA	100	somatic	0	0.216841611685427	0.362036310186297
1	55340794	55662284	2	neutral	AA	41.4028	somatic	0	4.50477681079859e-08	6.23788152243065e-08
1	55662284	55667230	1	loss	A	-1	germline	1	0.0146667346277483	0.0377168670970995
1	55667230	56186560	2	neutral	AA	100	germline	1	4.84608161878936e-12	9.10490682848319e-10
1	59599300	59683382	2	neutral	AA	100	somatic	0	0.241662131977008	0.173297209734709
1	65287200	65311930	2	neutral	AA	36.3786	germline	1	0.89971189835271	0.906564310386478
1	72300628	72345142	1	loss	A	-1	germline	1	2.20855091757566e-12	1.96509475358653e-14
1	95059647	95279744	2	neutral	AA	33.3732	somatic	0	0.0281476148583406	0.13346688513947
1	103294737	103428279	2	neutral	AA	54.5678	somatic	0	8.91970551529408e-06	2.16740890756073e-05
1	125069502	125076921	3	gain	-	-1	germline	1	0.0027053223241776	0.00497087135056029
1	125079394	125081867	12	gain	-	-1	germline	1	0.0832687379338078	0.270044235994298
1	125081867	125084340	5	gain	-	-1	germline	1	0.0832783877838826	0.270060995486675
1	125084340	125163476	3	gain	-	-1	germline	1	0.00027333683662846	0.000481778909606656
1	125163476	125165949	6	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
1	165592080	165616810	1	loss	A	-1	germline	1	2.65417852689048e-07	3.70653518988462e-08
1	179406258	180239659	2	neutral	AA	30.2624	germline	1	1.92635265240775e-28	0
1	223492429	223507267	2	neutral	AA	100	somatic	0	0.445792504494434	0.876930754509703
1	224011759	224014232	6	gain	AAAAAA	1.76329	germline	1	0.0832771815030846	0.270058900508607
1	228067479	228072425	1	loss	A	-1	germline	1	0.0143300642834632	0.0366927069252102
1	234776728	234781674	6	gain	AAAABB	4.02524	germline	1	0.0143094944302004	0.0366367841569266
1	236094837	236097310	5	gain	AAABB	6.52467	germline	1	0.0832771815030846	0.270058900508607
2	3180278	3182751	5	gain	-	-1	germline	1	0.0832783877838826	0.270060995486675
2	34468674	34505769	1	loss	A	-1	germline	1	3.37512364512931e-09	7.53686668630849e-10
2	89772373	89789684	5	gain	-	-1	germline	1	2.2110794647933e-05	1.22973679087535e-05
2	89789684	89794630	3	gain	-	-1	germline	1	0.0145713997985347	0.0373544669889954
2	89794630	89824306	5	gain	-	-1	somatic	0	9.23400919991233e-09	5.58794455152167e-10
2	89824306	89841617	19	gain	-	-1	germline	1	4.59442320714572e-06	1.6638089157528e-06
2	89841617	89851509	4	gain	-	-1	germline	1	0.000532409281636104	0.000671282244330551
2	91411972	91414445	5	gain	-	-1	germline	1	0.0832801972316187	0.270064137976019
2	125685279	125695171	0	loss	-	-1	germline	1	0.0144940722595997	0.037196767776393
2	172138111	172143057	1	loss	A	-1	germline	1	0.0160577369660617	0.0419505080673221
2	238914057	238916530	2	neutral	AA	100	somatic	0	0.707923747532361	0.853363722903341
2	240145611	240155503	2	neutral	AA	100	somatic	0	0.634456939049005	0.712281656101402
2	240622900	240672360	2	neutral	AA	45.5752	somatic	0	0.00277148331181863	0.0297830887109731
2	240766334	240768807	2	neutral	AA	100	somatic	0	0.223228278663606	0.462915312942419
2	241115027	241127392	2	neutral	AA	54.5679	somatic	0	0.610879391989973	0.935599501687565
2	241209001	241211474	2	neutral	AA	100	somatic	0	0.63765278618034	0.813447510875927
2	241248569	241307921	2	neutral	AA	37.3767	somatic	0	0.000292724348634625	0.00496308660113121
2	241312867	241399422	2	neutral	AA	65.0294	somatic	0	0.000131818646796167	0.00282268318025702
2	241735750	241738223	2	neutral	AA	100	somatic	0	0.301260635361294	0.546750411862488
3	8269712	8301861	2	neutral	AA	28.9435	somatic	0	0.0878033017156398	0.214047952678095
3	26359707	26409167	2	neutral	AA	100	somatic	0	0.735756072952068	0.732837806583794
3	29401497	29421281	2	neutral	AA	36.3795	somatic	0	0.827845601182948	0.896656813282407
3	37935820	37945712	1	loss	A	-1	germline	1	0.00161985744364009	0.00163565465781912
3	52993917	53003809	1	loss	A	-1	germline	1	0.000911368090447793	0.00141514922265518
3	53176919	53293150	2	neutral	AA	72.9248	somatic	0	0.0784960695106335	0.0921762846826959
3	56592132	56629227	2	neutral	AA	36.3786	somatic	0	0.0223542522373597	0.060109604250279
3	68586182	68591128	1	loss	A	-1	germline	1	0.0184852504551446	0.0433748605133817
3	68690048	68699940	1	loss	A	-1	germline	1	0.0197516716948857	0.0534274399599669
3	69174756	69229162	2	neutral	AA	26.058	somatic	0	0.398346135908271	0.357598341501478
3	76235171	76294523	2	neutral	AA	36.5409	somatic	0	0.0140339030346979	0.0795296192133852
3	79605870	79675114	2	neutral	AA	100	somatic	0	0.433228334371519	0.219081571168439
3	90395569	90425245	2	neutral	AA	1.59067	germline	1	0.553224286853937	0.903825504960296
3	90667599	90712113	1	loss	A	-1	germline	1	7.26532635845794e-11	1.43118850104429e-12
3	95744668	95749614	1	loss	A	-1	germline	1	0.0206470667224977	0.0562572883519038
3	98138532	98185519	2	neutral	AA	1.21304	germline	1	0.106749016148431	0.27823289747814
3	98687538	98694957	1	loss	A	-1	germline	1	0.00503848934247412	0.00950425093564045
3	99179665	99184611	1	loss	A	-1	germline	1	0.0144693540106319	0.0371192962608154
3	123820637	123842894	2	neutral	AA	28.0521	somatic	0	0.0641033994601561	0.0718260565996303
3	131988956	131996375	1	loss	A	-1	germline	1	0.0108255403909029	0.0196256314445927
3	132911385	132968264	2	neutral	AA	27.6821	somatic	0	0.000354793991877985	0.000975255734483316
3	133413404	133418350	1	loss	A	-1	germline	1	0.0268654173314237	0.0554560211134992
3	136301868	136309287	1	loss	A	-1	germline	1	0.0220438681256654	0.0607024644750729
3	143854410	143975587	2	neutral	AA	36.3842	somatic	0	0.0926325470442207	0.247316766494448
3	146666211	146673630	1	loss	A	-1	germline	1	0.0144672397798733	0.0370303929592709
3	160554579	160683175	2	neutral	AA	100	germline	1	0.0324721668274386	0.0843878518108386
3	162807482	162827266	1	loss	A	-1	germline	1	2.97003015510363e-06	7.49403746502786e-07
3	170622162	170763123	2	neutral	AA	27.2839	somatic	0	6.57360768603942e-05	0.000988288763168588
3	176765094	176911001	2	neutral	AA	19.9612	somatic	0	0.505067208866944	0.534940843066266
3	183108339	183130596	2	neutral	AA	54.5678	somatic	0	0.506492512975582	0.821697721010193
3	186765906	186775798	1	loss	A	-1	germline	1	0.000928890140496753	0.00100215401722969
3	197708931	197783121	2	neutral	AA	49.1901	somatic	0	0.018689195833783	0.0353160243127963
4	126123	133542	1	loss	A	-1	germline	1	0.0147043690962968	0.0378316666450118
4	553952	556425	4	gain	-	-1	somatic	0	0.0832826098781407	0.270068328003331
4	7861667	7864140	4	gain	-	-1	germline	1	0.0832820067112023	0.270067280492054
4	40292589	40297535	4	gain	-	-1	germline	1	0.0143131113115428	0.0366422297611082
4	49089050	49091523	4	gain	-	-1	germline	1	0.083284419400188	0.270071470554956
4	62777105	62816673	3	gain	-	-1	germline	1	2.87716974081851e-11	4.23594492815482e-12
4	186174859	186177332	0	loss	-	-1	germline	1	0.0832681348482546	0.270043188551223
5	756738	764157	3	gain	AAB	33.858	somatic	0	0.00270198970251547	0.00496015177300513
5	3630364	3714446	2	neutral	AA	35.6223	germline	1	0.591887378726203	0.793122571058085
5	8413146	8440349	2	neutral	AA	7.27572	somatic	0	0.813839680738022	0.520805066869484
5	11427733	11445044	2	neutral	AA	100	somatic	0	0.63116313579775	0.907505217511578
5	11786318	11798683	2	neutral	AA	100	somatic	0	0.343653528607387	0.475509815518598
5	20676753	20988351	2	neutral	AA	11.4047	somatic	0	0.178679714448351	0.205918847091036
5	31506020	31513439	2	neutral	AA	100	germline	1	0.277251884404909	0.298518575409926
5	32569410	32591667	2	neutral	AA	100	somatic	0	0.567791417960651	0.614587710946836
5	33365716	33390446	2	neutral	AA	54.7191	somatic	0	0.730843405032364	0.990333993430074
5	37619276	37668736	2	neutral	AA	100	somatic	0	0.0127584373239663	0.0113994792781864
5	45003654	45013546	1	loss	A	-1	germline	1	0.00147565037663627	0.00151418473009479
5	45372131	45377077	1	loss	A	-1	germline	1	0.0172913116574823	0.0457360154262559
5	51905797	51935473	2	neutral	AA	15.7303	somatic	0	0.872622434184307	0.966021201899573
5	52951876	52956822	2	neutral	AA	100	somatic	0	0.389263922895508	0.446775447681833
5	56785026	56824594	2	neutral	AA	37.0065	somatic	0	0.465332091151465	0.727390008429125
5	58026472	58038837	1	loss	A	-1	germline	1	0.000358867845609935	0.000283618094811144
5	60509364	60704731	2	neutral	AA	100	somatic	0	3.95611367029473e-10	1.88571173787011e-07
5	60704731	60709677	1	loss	A	-1	somatic	0	0.021501035732607	0.0562888960745466
5	77236736	77251574	2	neutral	AA	100	somatic	0	0.110944662215359	0.370819754768577
5	84907982	84967334	2	neutral	AA	100	somatic	0	0.0938028623505374	0.206418065642745
5	86918531	86923477	1	loss	A	-1	germline	1	0.0198774906982899	0.0538256402670353
5	87022397	87037235	2	neutral	AA	100	somatic	0	0.0342420245523152	0.0193673709736388
5	91261119	91320471	2	neutral	AA	32.3788	somatic	0	0.248343021558868	0.417460880829013
5	93182640	93190059	2	neutral	AA	100	somatic	0	0.322925317587899	0.618671713645051
5	99009028	99011501	0	loss	-	-1	germline	1	0.0832687379338078	0.270044235994287
5	99832537	99842429	2	neutral	AA	100	somatic	0	0.338721715369418	0.527820775940272
5	107078427	107115522	2	neutral	AA	100	somatic	0	0.874207691576188	0.131930308239525
5	112927072	112944383	1	loss	A	-1	germline	1	1.28507028058601e-05	6.33585971865358e-06
5	113513173	113552741	2	neutral	AA	100	somatic	0	0.108149467670932	0.161149040563899
5	115397599	115402545	2	neutral	AA	100	somatic	0	0.502221421339758	0.48190798100007
5	116146918	116156810	2	neutral	AA	100	somatic	0	0.952258437920353	0.905486233570212
5	116710762	116755276	2	neutral	AA	36.6087	somatic	0	0.183219412345539	0.265149248652337
5	118538309	118545728	1	loss	A	-1	germline	1	0.0213670416488112	0.0560509664326194
5	123924503	123954179	2	neutral	AA	100	somatic	0	0.410396329597824	0.140497863307935
5	124913703	124948325	2	neutral	AA	36.7231	somatic	0	0.78764708446087	0.725267042115278
5	126160095	126169987	2	neutral	AA	54.5678	germline	1	0.991475557746761	0.999778038116547
5	130992337	131217380	2	neutral	AA	100	germline	1	0.012281897463656	0.0215895643089884
5	135777592	135785011	1	loss	A	-1	germline	1	0.00559798505246108	0.0106360821644427
5	153276540	153343311	2	neutral	AA	14.1202	somatic	0	0.704169883787962	0.0999241160627489
5	167812834	167830145	2	neutral	AA	100	somatic	0	0.576618721231312	0.200619171336748
5	174455312	174524556	2	neutral	AA	10.8297	somatic	0	0.743228966018766	0.738171791633519
5	178585222	178587695	6	gain	AAAABB	100	germline	1	0.0832765783679934	0.270057853024022
5	181045857	181048330	4	gain	AAAB	27.2206	germline	1	0.0832820067112023	0.270067280492054
6	257192	383315	4	gain	AABB	1.12733	germline	1	3.59430567695954e-33	0
6	1872061	1928940	2	neutral	AA	14.7311	somatic	0	6.32538387551108e-09	9.26943196088992e-07
6	8823664	8828610	2	neutral	AA	100	somatic	0	0.46647620273258	0.644507636117975
6	13208293	13233023	2	neutral	AA	37.1795	somatic	0	0.0512035452479997	0.0423148512356096
6	23834774	23852085	2	neutral	AA	68.8423	somatic	0	0.264774800207735	0.493248856164774
6	24636026	24650864	2	neutral	AA	36.1801	somatic	0	0.369907896708214	0.276904680261676
6	32490274	32574356	0	loss	-	-1	somatic	0	7.17855463799315e-10	1.7132040230905e-10
6	32574356	32576829	3	gain	AAB	2.01154	germline	1	0.0832916578068635	0.270084041028375
6	32576829	32665857	0	loss	-	-1	germline	1	3.97727530723026e-09	1.28283850209243e-09
6	35786783	35799148	3	gain	AAB	2.87497	germline	1	0.000107959960197286	9.10906401336842e-05
6	40458280	40549781	2	neutral	AA	36.511	somatic	0	0.0097917558552039	0.0121918431755603
6	40868798	40910839	2	neutral	AA	100	somatic	0	0.00178307537472033	0.0291145640846321
6	45725770	45730716	2	neutral	AA	100	somatic	0	0.619651885700453	0.552144937809776
6	48124580	48263068	2	neutral	AA	100	somatic	0	0.637750346431986	0.475845884595713
6	60229915	60239807	3	gain	-	-1	germline	1	0.00053343090035839	0.000672669888362898
6	82331116	82350900	2	neutral	AA	100	somatic	0	0.717377717086137	0.142403155865913
6	96145294	96152713	2	neutral	AA	36.4554	somatic	0	0.852340396572245	0.854718466828949
6	103289791	103314521	1	loss	A	-1	germline	1	5.2455845232424e-07	1.18141909588587e-07
6	113453821	113466186	2	neutral	AA	43.785	somatic	0	0.360128662962304	0.530426251149176
6	141435816	141448181	2	neutral	AA	100	somatic	0	0.990247249009427	0.961523085931891
6	157312476	157314949	9	gain	AAAAAABBB	2.1493	germline	1	0.0832711503114042	0.270048425796215
6	158403069	158425326	2	neutral	AA	54.5681	somatic	0	0.701757397739519	0.758383628870345
6	168658600	168727844	2	neutral	AA	14.5016	somatic	0	0.340867698923406	0.346636529049215
7	3571012	3580904	1	loss	A	-1	germline	1	0.00144919906956892	0.00166405757433508
7	9760931	9765877	1	loss	A	-1	germline	1	0.0170512144785913	0.0449954500511218
7	20231613	20239032	1	loss	A	-1	germline	1	0.00476626842723361	0.00810095876721484
7	57487358	57497250	3	gain	-	-1	germline	1	0.000627937583651972	0.00100067277784277
7	61046005	61053424	4	gain	-	-1	germline	1	0.00270169480749222	0.00496003537236123
7	61053424	61095465	3	gain	-	-1	somatic	0	0.00134838915534291	0.00186075678024189
7	62297343	62381425	3	gain	AAB	0.531089	somatic	0	6.98711033924423e-08	1.71087844713647e-06
7	62401209	62406155	4	gain	-	-1	germline	1	0.0143113979514461	0.0366393635653721
7	62438304	62455615	3	gain	AAB	3.23328	germline	1	1.49867021774082e-05	7.52862842718915e-05
7	66558322	66600363	2	neutral	AA	100	somatic	0	0.337829832786237	0.217681506960741
7	68586182	68596074	2	neutral	AA	62.1596	somatic	0	0.988529988165399	0.969283358944255
7	70955316	70962735	1	loss	A	-1	germline	1	0.0196646354250433	0.0531520339735478
7	73655832	73722603	2	neutral	AA	93.3704	germline	1	0.946904263210338	0.796855966975733
7	77224371	77241682	2	neutral	AA	100	somatic	0	0.135203118094999	0.253862791438794
7	83369776	83392033	2	neutral	AA	26.146	somatic	0	0.280938364013661	0.234554613287783
7	86671231	86695961	2	neutral	AA	54.5678	somatic	0	0.953959754127129	0.892929168779794
7	90180418	90182891	0	loss	-	-1	germline	1	0.0832765783679934	0.270057853024011
7	100950333	100957752	3	gain	AAA	8.95134	germline	1	0.00270183357795718	0.00496032637866584
7	100957752	100960225	13	gain	AAAAAAAAAAAAA	19.5768	germline	1	0.0832681348482546	0.270043188551233
7	100960225	100970117	4	gain	AABB	0.381521	germline	1	0.000532489737074658	0.000671376771108623
7	110540627	110572776	2	neutral	AA	100	somatic	0	0.0640052694346552	0.10621253446104
7	114146261	114173464	2	neutral	AA	100	somatic	0	0.313068546191303	0.171125139664546
7	114836228	114838701	1	loss	A	-1	somatic	0	0.124927400859036	0.336231656822714
7	114838701	114843647	2	neutral	AA	54.5678	somatic	0	0.339044564186818	0.46333195034352
7	116290352	116300244	1	loss	A	-1	germline	1	0.00131387811228701	0.00160991220482887
7	124797472	124817256	2	neutral	AA	54.5679	somatic	0	0.200600572644648	0.531487103903104
7	127376811	127384230	2	neutral	AA	100	somatic	0	0.540901931322014	0.570110163949749
7	131697142	131709507	2	neutral	AA	100	somatic	0	0.25454480867635	0.18026114920544
7	134100898	134113263	1	loss	A	-1	germline	1	0.000180170046709552	0.000198623048601743
7	136450248	136625831	2	neutral	AA	100	somatic	0	0.0033422674099146	0.00432033931438536
7	143846991	143849464	4	gain	AAAB	44.4616	germline	1	0.0832820067112023	0.270067280492054
7	149262861	149307375	2	neutral	AA	54.5678	somatic	0	0.240079270436766	0.244587954629362
7	152401098	152408517	7	gain	AAAAABB	2.29263	germline	1	0.00270067157642997	0.00495863875992886
7	155316765	155346441	2	neutral	AA	4.20634	somatic	0	0.00759775867214437	0.0506998559194592
7	158150823	158153296	5	gain	AAABB	4.80305	germline	1	0.0832771815030846	0.270058900508607
7	158153296	158232432	2	neutral	AA	7.31557	somatic	0	0.000127950315833067	0.000821220980469439
7	158519300	158593490	2	neutral	AA	38.3931	somatic	0	5.31917261430258e-07	2.74999797412745e-05
7	158593490	158595963	6	gain	AAAABB	36.7024	germline	1	0.0832771815030846	0.270058900508607
8	642980	650399	1	loss	A	-1	germline	1	0.0186364364654068	0.0439748139399366
8	5737360	5747252	1	loss	A	-1	germline	1	0.00128758399412628	0.0015053399860252
8	6110783	6115729	1	loss	A	-1	germline	1	0.014989722792357	0.0386546584182721
8	16237718	16269867	2	neutral	AA	100	somatic	0	0.307740416198853	0.722067555927064
8	23305552	23320390	2	neutral	AA	100	somatic	0	0.340805032455623	0.465870398720644
8	24522268	24546998	2	neutral	AA	100	somatic	0	0.43097803168553	0.729776680712263
8	27779209	27786628	2	neutral	AA	100	somatic	0	0.118813038750537	0.415177503539704
8	28488960	28493906	2	neutral	AA	54.568	somatic	0	0.250930651595243	0.714557873575356
8	29819434	29824380	2	neutral	AA	36.3791	somatic	0	0.957788646211582	0.978095805965476
8	30138451	30148343	2	neutral	AA	36.3786	somatic	0	0.325052810348288	0.522787108586077
8	33998804	34003750	2	neutral	AA	100	somatic	0	0.908219038783908	0.852662447844773
8	43235459	43237932	4	gain	AAAA	77.7963	germline	1	0.083284419400188	0.270071470554956
8	43237932	43240405	15	gain	AAAAAAAAAABBBBB	6.13882	germline	1	0.0832681348482546	0.270043188551233
8	43240405	43242878	8	gain	AAAAABBB	3.51705	germline	1	0.0832729596317546	0.270051568178793
8	47919321	47983619	2	neutral	AA	16.352	somatic	0	0.961160459835433	0.897280825180676
8	58704074	58748588	2	neutral	AA	100	germline	1	0.139360196198785	0.284901171420164
8	67775038	67779984	2	neutral	AA	100	somatic	0	0.0405116938950735	0.0840801855395712
8	88798011	88830160	2	neutral	AA	54.5678	somatic	0	0.000669384777607231	0.00594459455174967
8	89124447	89206056	2	neutral	AA	100	somatic	0	0.0915792108139743	0.0727706805257157
8	91130050	91186929	2	neutral	AA	27.2869	somatic	0	0.014161424860389	0.0338773102988505
8	106944885	106959723	2	neutral	AA	62.8986	somatic	0	0.967816898608981	0.995864439463356
8	107399917	107404863	2	neutral	AA	100	somatic	0	0.389508692567274	0.35996034962769
8	112575906	112882558	2	neutral	AA	37.6717	somatic	0	1.63548330224283e-07	1.222792052058e-07
8	114621077	114630969	1	loss	A	-1	germline	1	0.000975304475957679	0.00160433519311776
8	120974214	121236352	2	neutral	AA	10.8019	somatic	0	1.27988435317205e-11	7.57379714499962e-11
8	121785358	121810088	2	neutral	AA	54.5682	somatic	0	0.722205622305096	0.739213375601941
8	126179879	126182352	0	loss	-	-1	germline	1	0.0832657225414246	0.27003899880862
8	126231812	126241704	2	neutral	AA	100	somatic	0	0.0449919746260062	0.0600828189729729
8	133067184	133077076	2	neutral	AA	36.3791	somatic	0	0.12094496395913	0.0969277789637606
8	136667872	136850874	1	loss	A	-1	germline	1	1.40675811527612e-45	0
8	138206078	138220916	2	neutral	AA	5.79242	somatic	0	0.107878067882515	0.277405820047293
8	144123967	144126440	5	gain	AAAAA	38.6943	germline	1	0.0832771815030846	0.270058900508607
8	144126440	144158589	2	neutral	AA	54.6265	somatic	0	0.692400005858452	0.796667386033912
9	6699357	6711722	1	loss	A	-1	germline	1	0.000219321015738772	0.000264477385721773
9	23359958	23377269	1	loss	A	-1	germline	1	2.04517017185016e-05	7.85920519286165e-06
9	40868798	40913312	4	gain	-	-1	somatic	0	0.000107604805529115	9.08540360053944e-05
9	40913312	40915785	6	gain	-	-1	germline	1	0.0832765783679934	0.270057853024022
9	40923204	40925677	5	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
9	40925677	40928150	6	gain	-	-1	germline	1	0.0832759752364407	0.270056805542403
9	42387220	42389693	6	gain	AAAABB	100	somatic	0	0.0832771815030846	0.270058900508607
9	64772816	64775289	0	loss	-	-1	germline	1	0.0832723565214328	0.270050520714956
9	75864221	75869167	2	neutral	AA	100	somatic	0	0.194851652136582	0.268304791513341
9	78008312	78013258	2	neutral	AA	54.5678	somatic	0	0.871150574828209	0.70796701524458
9	81351808	81356754	1	loss	A	-1	germline	1	0.015091603139589	0.0389034376157344
9	86831976	86839395	1	loss	A	-1	germline	1	0.00306052126554542	0.00542687888643834
9	92925448	93046625	2	neutral	AA	32.5795	somatic	0	0.0549185125026295	0.199885940808832
9	93306290	93308763	2	neutral	AA	100	somatic	0	0.152486808234549	0.374999901848197
9	96090888	96160132	2	neutral	AA	100	somatic	0	0.559671230327476	0.137897774917803
9	97507917	97510390	2	neutral	AA	100	somatic	0	0.391351906349702	0.631487012712904
9	98657862	98774093	2	neutral	AA	6.92204	somatic	0	0.00162444478029984	0.00853538763242934
9	103012815	103015288	0	loss	-	-1	germline	1	0.0832705472116976	0.270047378341276
9	103294737	103299683	2	neutral	AA	54.5704	somatic	0	0.402950445210435	0.399875056135668
9	105035729	105043148	1	loss	A	-1	germline	1	0.0058613028355264	0.00987226863505897
9	105782575	105792467	2	neutral	AA	36.3786	somatic	0	0.315185720052333	0.772225924737614
9	111965075	111970021	2	neutral	AA	36.3786	somatic	0	0.478762166400305	0.645370608344997
9	112523973	112551176	2	neutral	AA	27.4119	somatic	0	0.342755015967508	0.304490973841336
9	112659988	112669880	2	neutral	AA	36.3786	somatic	0	0.0311745401919528	0.0794080873133622
9	115921875	115924348	2	neutral	AA	100	somatic	0	0.454095686215865	0.684328892060836
9	116923440	116928386	2	neutral	AA	100	somatic	0	0.480930850963421	0.838226027984412
9	118090696	118164886	2	neutral	AA	54.5678	somatic	0	0.209849691885476	0.279750759003195
9	118582823	118602607	2	neutral	AA	100	somatic	0	0.0891622102426455	0.110643962650822
9	120261990	120286720	2	neutral	AA	100	somatic	0	0.0018687869132849	0.011567966750029
9	120595845	120600791	2	neutral	AA	54.5678	somatic	0	0.949323398698462	0.997809797947751
9	121523220	121550423	2	neutral	AA	64.6093	somatic	0	0.567982759514577	0.710501576583405
9	125944944	125957309	2	neutral	AA	100	germline	1	0.00708104354893606	0.0130719643315627
9	126939090	126983604	2	neutral	AA	100	somatic	0	0.839628502464651	0.674367782282692
9	127720558	127787329	2	neutral	AA	48.3731	somatic	0	0.994496747594242	0.899155665111055
9	127965385	127995061	2	neutral	AA	54.568	germline	1	0.619278204988447	0.80358370071408
9	128183009	128200320	2	neutral	AA	100	somatic	0	0.632123401537451	0.892215133831389
9	128717177	128722123	2	neutral	AA	36.3858	somatic	0	0.497915294805764	0.836298576810917
9	129424455	129429401	2	neutral	AA	0.963218	somatic	0	0.0171765378309435	0.0435841631724602
9	129429401	129439293	3	gain	AAB	0.367368	germline	1	0.000533278128694217	0.000672522586615543
9	129439293	129471442	2	neutral	AA	1.18232	germline	1	0.422461274482399	0.793062545755259
9	130000664	130003137	2	neutral	AA	100	somatic	0	0.418565008439775	0.654969635351231
9	131056635	131081365	2	neutral	AA	100	somatic	0	0.396837456820744	0.122535627109768
9	131111041	131143190	2	neutral	AA	87.138	somatic	0	0.626513789180448	0.212412069205011
9	131425112	131566073	2	neutral	AA	51.9192	somatic	0	0.510968055548975	0.46783548590869
9	131585857	131756494	2	neutral	AA	54.5679	germline	1	0.25441803320734	0.219243854543335
9	134001978	134098425	2	neutral	AA	9.07173	somatic	0	0.00573814268764571	0.0277387406081604
9	135332452	135337398	2	neutral	AA	24.2957	somatic	0	0.931195209780898	0.752081862782708
9	135673726	135678672	2	neutral	AA	100	somatic	0	0.881812084489536	0.735575432135311
9	137466651	137516111	2	neutral	AA	14.766	germline	1	0.839970137253545	0.705449076824847
9	137713951	137862331	2	neutral	AA	46.7586	germline	1	0.159567658715175	0.0306073712466498
10	2391391	2393864	4	gain	-	-1	germline	1	0.083284419400188	0.270071470554956
10	38484826	38502137	3	gain	-	-1	germline	1	8.74408237771522e-06	5.67592270739325e-06
10	38526867	38529340	18	gain	-	-1	germline	1	0.0832681348482546	0.270043188551233
10	38573854	38578800	1	loss	A	-1	germline	1	0.029466258820098	0.056984775331962
10	38578800	38581273	4	gain	-	-1	germline	1	0.0832826098781407	0.270068328003331
10	38581273	38596111	1	loss	A	-1	germline	1	0.000176329400443656	0.000140712009821686
10	41838214	41843160	2	neutral	AA	11.2359	somatic	0	0.0173959623748584	0.0451616363499491
10	41857998	41914877	18	gain	AAAAAAAAAAAABBBBBB	2.23711	germline	1	2.20956716364676e-05	1.22910204769511e-05
10	42300665	42322922	3	gain	AAB	25.0224	somatic	0	4.51123060250319e-06	1.84779356737774e-06
10	45156980	45174291	2	neutral	AA	15.5908	somatic	0	0.179006009297898	0.269456720003374
10	46514657	46561644	4	gain	AABB	2.25992	germline	1	9.26906401844393e-13	3.44169137633799e-15
10	47093339	47120542	2	neutral	AA	100	somatic	0	0.00428630510576241	0.03864692092294
10	49511933	49541609	2	neutral	AA	100	germline	1	0.054392377100216	0.0503396804668179
10	53023593	53028539	1	loss	A	-1	germline	1	0.0186198779555934	0.044225789152649
10	56653957	56681160	2	neutral	AA	40.4726	somatic	0	0.0515062284584204	0.0441916735585444
10	57497250	57529399	2	neutral	AA	100	somatic	0	0.00921240447893019	0.0821754518827617
10	63246975	63286543	2	neutral	AA	100	somatic	0	0.239507148121433	0.454516540983339
10	63983929	64058119	2	neutral	AA	54.5791	somatic	0	0.253253016726352	0.157272110850213
10	66407469	66466821	2	neutral	AA	100	somatic	0	0.0494492471296659	0.0604523551568673
10	67725578	67728051	0	loss	-	-1	germline	1	0.0832693410228994	0.270045283440318
10	67765146	67849228	2	neutral	AA	63.2136	somatic	0	0.0518406966347709	0.0298672019682846
10	71420240	71435078	2	neutral	AA	13.1566	somatic	0	0.182353535743999	0.336298765558349
10	71679905	71689797	2	neutral	AA	11.4076	somatic	0	0.914906210276225	0.670398011610419
10	73005433	73010379	2	neutral	AA	9.09464	somatic	0	0.493574468098201	0.916752188214021
10	76494836	76502255	1	loss	A	-1	germline	1	0.0153495587592934	0.0396198048178207
10	89181326	89191218	1	loss	A	-1	germline	1	0.00158064734417271	0.00162708763574593
10	97804677	97821988	2	neutral	AA	54.5693	somatic	0	0.147843032745469	0.0922649168497273
10	98996663	99046123	2	neutral	AA	54.5873	germline	1	0.219484368636218	0.170192925063831
10	99201922	99226652	2	neutral	AA	100	germline	1	0.934142160536261	0.874223510933767
10	102095332	102117589	2	neutral	AA	54.5678	somatic	0	0.45224249400074	0.44679216069985
10	103250223	103252696	4	gain	AABB	20.4037	germline	1	0.0832832130486178	0.270069375517573
10	108302562	108502875	2	neutral	AA	75.378	germline	1	0.0531055890189127	0.0894085416820735
10	108651255	108661147	2	neutral	AA	54.5693	somatic	0	0.755389232993797	0.768166336211059
10	111834006	111937872	2	neutral	AA	36.3788	somatic	0	0.0117436656589469	0.0731814998909788
10	113446402	113456294	1	loss	A	-1	germline	1	0.00130329541070983	0.00174462365139216
10	115978754	115996065	2	neutral	AA	100	somatic	0	0.499882211397408	0.734464558597343
10	120467249	120469722	0	loss	-	-1	germline	1	0.0832687379338078	0.270044235994287
10	121045931	121053350	2	neutral	AA	100	somatic	0	0.557874134563134	0.436756961928056
10	121142378	121295704	2	neutral	AA	100	somatic	0	0.832007271366429	0.65914536865496
10	122586610	122591556	1	loss	A	-1	germline	1	0.019027943003858	0.046422636119955
10	125126381	125153584	2	neutral	AA	54.5678	somatic	0	0.340997313628212	0.359804842959598
10	125843551	125930106	2	neutral	AA	22.3973	somatic	0	0.793990346255517	0.763431140518798
10	127703247	127745288	2	neutral	AA	14.5623	somatic	0	0.686474402171853	0.265219721405046
10	128462458	128464931	10	gain	AAAAAABBBB	47.4754	germline	1	0.0832687379338078	0.270044235994298
10	130079800	130084746	2	neutral	AA	100	somatic	0	0.676101885998469	0.935431421360171
10	131622952	131625425	0	loss	-	-1	germline	1	0.0832765783679934	0.270057853024011
10	132251094	132268405	2	neutral	AA	9.43217	germline	1	0.000609030410286776	0.00534020255397938
10	132362379	132364852	4	gain	AABB	8.45812	germline	1	0.0832820067112023	0.270067280492054
10	132750640	132775370	2	neutral	AA	23.4107	somatic	0	0.165656713165982	0.0760580872396661
11	3617999	3622945	2	neutral	AA	100	somatic	0	0.184260208232416	0.251495379093296
11	5762090	5786820	1	loss	A	-1	germline	1	4.37260148710598e-07	3.90220292745269e-08
11	16245137	16267394	2	neutral	AA	100	somatic	0	0.32243718927048	0.659550693163951
11	18923396	18940707	4	gain	AAAB	4.02993	germline	1	4.5984769075476e-06	1.66449236149724e-06
11	18945653	19007478	2	neutral	AA	8.29272	somatic	0	2.80855799344717e-05	0.000762561260966299
11	19605944	19618309	2	neutral	AA	100	somatic	0	0.878547143660099	0.953866947493563
11	26513033	26555074	2	neutral	AA	100	somatic	0	0.0511269654689036	0.215378591562452
11	32416084	32421030	2	neutral	AA	100	somatic	0	0.570133547119412	0.74831346212275
11	36894687	36944147	2	neutral	AA	100	somatic	0	0.658566451279994	0.648285847622197
11	37775075	37780021	2	neutral	AA	100	somatic	0	0.539466822831482	0.802528862116878
11	38781586	38920074	2	neutral	AA	44.0132	somatic	0	0.000230731310931841	7.72644888888951e-05
11	42693872	42698818	2	neutral	AA	100	somatic	0	0.895261523548959	0.990439377333045
11	48713154	48715627	0	loss	-	-1	germline	1	0.083266928687763	0.27004109367399
11	48715627	49900194	2	neutral	AA	1.66914	somatic	0	8.44469228624485e-06	0.000243849279468966
11	54757166	54776950	1	loss	A	-1	germline	1	4.98742481191013e-05	2.80696044956397e-05
11	54930276	54937695	3	gain	AAB	6.9407	germline	1	0.00270412423116148	0.00496335377212964
11	55222090	55249293	2	neutral	AA	11.4903	somatic	0	0.973351542957253	0.615602449904212
11	55597986	55684541	1	loss	A	-1	germline	1	3.5506035002485e-21	0
11	63425031	63429977	3	gain	AAB	12.7485	germline	1	0.0143145392498412	0.0366442362148444
11	64243594	64337568	2	neutral	AA	100	somatic	0	0.009595715030322	0.0101509292102546
11	65660623	65680407	2	neutral	AA	54.5678	somatic	0	0.173466188086842	0.131517087380005
11	66328333	66345644	2	neutral	AA	100	somatic	0	0.0681341854816782	0.101530080307272
11	68643061	68670264	2	neutral	AA	12.4159	somatic	0	0.0958524042912134	0.0857891614568186
11	69053579	69125296	2	neutral	AA	62.0428	somatic	0	0.375517152477722	0.239076837711492
11	69921602	69929021	2	neutral	AA	100	somatic	0	0.476230348268708	0.661048337675735
11	70245565	70388999	2	neutral	AA	11.6483	somatic	0	0.322382596086012	0.373541929808759
11	76430538	76477525	2	neutral	AA	100	somatic	0	0.0178080016725994	0.0406887945296633
11	80471420	80476366	2	neutral	AA	100	somatic	0	0.336785992296527	0.397862945376877
11	90563733	90568679	2	neutral	AA	100	germline	1	0.989289426976344	0.96115355255859
11	90927264	90956940	2	neutral	AA	24.092	somatic	0	0.00871904847674785	0.0160539646302875
11	91829909	91889261	2	neutral	AA	100	somatic	0	0.0613821902860526	0.0280434868227571
11	104044056	104049002	1	loss	A	-1	somatic	0	0.0235934905287071	0.055338670094438
11	107780759	107800543	3	gain	AAB	5.38135	germline	1	9.71092627315213e-07	2.29988182165464e-07
11	112553649	112561068	2	neutral	AA	100	somatic	0	0.197416053300726	0.445726512419785
11	114608712	114621077	2	neutral	AA	27.5142	somatic	0	0.202492376925506	0.106980603690834
11	114942567	115132988	2	neutral	AA	100	somatic	0	0.344082399184612	0.181268183496288
11	119438481	119448373	2	neutral	AA	100	somatic	0	0.272227002442046	0.329565762096851
11	122883370	122903154	2	neutral	AA	36.379	somatic	0	0.509655397296277	0.569894681958507
11	123739028	124033315	2	neutral	AA	15.6351	somatic	0	3.45308474640819e-07	6.66121256555074e-05
12	2255376	2257849	6	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
12	11383219	11390638	3	gain	-	-1	germline	1	0.00270311751355544	0.00496306260302404
12	37616803	37624222	1	loss	A	-1	germline	1	0.0037297411006248	0.00649534843711885
12	48315001	48317474	0	loss	-	-1	germline	1	0.0832717534146493	0.270049473254097
12	48611761	48720573	2	neutral	AA	44.6676	germline	1	0.828488317980531	0.875346049372113
12	50345334	50355226	2	neutral	AA	7.79555	somatic	0	0.883361091653195	0.910007117928265
12	57445317	57608535	2	neutral	AA	100	somatic	0	0.0891545063583602	0.0673148747729883
12	69654518	69701505	2	neutral	AA	54.5682	somatic	0	0.010377390873355	0.00830523346245482
12	71635391	71719473	2	neutral	AA	54.5678	somatic	0	0.485806455654782	0.659508209038082
12	86030724	86040616	1	loss	A	-1	germline	1	0.00139850120371902	0.0016297062432904
12	88696618	88704037	1	loss	A	-1	germline	1	0.0289812414797297	0.0832060509583146
12	92853731	93029314	2	neutral	AA	21.8279	somatic	0	0.0234006036449807	0.0521630832718595
12	94958254	94985457	2	neutral	AA	54.7247	germline	1	0.876984030993478	0.341682970685987
12	95826277	95833696	2	neutral	AA	100	somatic	0	0.481940550997039	0.376944736944009
12	105206366	105270664	2	neutral	AA	100	somatic	0	0.038631078033802	0.0307735542510704
12	123152927	123397754	2	neutral	AA	51.1176	germline	1	0.930522281231348	0.633001519249055
13	19118763	19143493	2	neutral	AA	36.4459	somatic	0	0.245461522825345	0.54403803220892
13	22019592	22024538	1	loss	A	-1	germline	1	0.0171410314351218	0.0452835229267988
13	25039125	25051490	2	neutral	AA	100	somatic	0	0.933891079616135	0.807443919300676
13	26475938	26478411	0	loss	-	-1	germline	1	0.0832687379338078	0.270044235994287
13	33561083	33570975	1	loss	A	-1	germline	1	0.00166107135208464	0.00152282949482396
13	50493714	50501133	1	loss	A	-1	germline	1	0.0194720387352337	0.0525499748679663
13	54762112	54920384	2	neutral	AA	75.1903	somatic	0	0.00317216951874457	0.00438648061613878
13	63059027	63068919	4	gain	AABB	0.971573	germline	1	0.000532744587376801	0.000672175494992322
13	66600363	66602836	0	loss	-	-1	germline	1	0.0832663256128247	0.270040046239822
13	71902475	71907421	1	loss	A	-1	germline	1	0.0151104645383569	0.0390559207886568
13	72580077	72597388	2	neutral	AA	100	somatic	0	0.401664875668309	0.65079288224056
13	90210094	90212567	0	loss	-	-1	germline	1	0.0832687379338078	0.270044235994287
13	102196725	102253604	2	neutral	AA	57.5091	somatic	0	0.140683276895231	0.109746978957317
13	114153680	114156153	1	loss	A	-1	somatic	0	0.0965773601115747	0.292439419692083
14	0	16091811	4	gain	AAAB	-1	somatic	0	NA	NA
14	16091811	16096757	12	gain	-	-1	germline	1	0.0143072104995152	0.0366330586252198
14	16096757	18658785	4	gain	AAAB	-1	somatic	0	0.757617666917916	0.878457231465106
14	18693407	19727121	4	gain	AAAB	-1	somatic	0	NA	NA
14	19727121	19942272	4	gain	AAAB	1.57436	germline	1	3.10690488259049e-29	0
14	19949691	19957110	4	gain	AABB	1.68983	germline	1	0.00270145197484989	0.00495968618545317
14	24138953	24156264	2	neutral	AA	54.5678	somatic	0	0.113266392605402	0.290534901470175
14	25867580	25882418	2	neutral	AA	100	somatic	0	0.599434672678945	0.482093431920881
14	26404221	26411640	2	neutral	AA	100	somatic	0	0.0228802346040966	0.03608845478601
14	27512125	27559112	2	neutral	AA	63.807	somatic	0	0.0722045899895027	0.0718909524930011
14	35136384	35146276	1	loss	A	-1	germline	1	0.00135695887994431	0.00155893063927037
14	36328370	36377830	2	neutral	AA	54.8585	somatic	0	0.176124868059673	0.0500078023239185
14	37300259	37302732	0	loss	-	-1	somatic	0	0.0832874353410409	0.270076708200302
14	38697504	38704923	2	neutral	AA	100	germline	1	0.512500964656654	0.347983635639215
14	40139263	40149155	1	loss	A	-1	somatic	0	0.00602765973892347	0.00952892074258649
14	41937134	41947026	2	neutral	AA	100	somatic	0	0.0508408696911971	0.205983894642053
14	42350125	42468829	2	neutral	AA	48.5283	somatic	0	0.000378497165549595	0.000871235768691636
14	48357042	48376826	2	neutral	AA	54.5678	somatic	0	0.259646916763118	0.630924779904218
14	50236522	50241468	2	neutral	AA	48.8849	somatic	0	0.714017717551757	0.909240744527339
14	54242782	54247728	1	loss	A	-1	somatic	0	0.0143142536521288	0.0366450961530119
14	60249699	60257118	2	neutral	AA	100	germline	1	0.0864748805232731	0.101701692614578
14	64033389	64095214	2	neutral	AA	100	germline	1	0.302826056978846	0.721116186129975
14	66578106	66659715	1	loss	A	-1	germline	1	9.4324699134492e-19	0
14	69001646	69060998	2	neutral	AA	100	somatic	0	0.179909593243124	0.243605113409803
14	72060747	72068166	2	neutral	AA	100	germline	1	0.333230077515591	0.559899613913164
14	75320161	75339945	2	neutral	AA	100	somatic	0	0.116801463435276	0.0403991156278068
14	75918627	75953249	2	neutral	AA	100	somatic	0	0.0957467032270879	0.217671197198561
14	80478839	80528299	2	neutral	AA	100	somatic	0	0.00305291152715003	0.0191733891501854
14	82321224	82358319	2	neutral	AA	37.4669	somatic	0	0.301723166477183	0.352581540844599
14	84042432	84151244	2	neutral	AA	27.2841	somatic	0	0.0158189347585007	0.0037057401271382
14	90536530	90623085	2	neutral	AA	100	somatic	0	6.81344579719319e-06	2.99164492340021e-05
14	90828344	90833290	2	neutral	AA	100	somatic	0	0.782348640671271	0.984560698502441
14	91960978	92020330	2	neutral	AA	42.0464	somatic	0	0.00168426797776203	0.026165156983934
14	94884064	94898902	2	neutral	AA	100	somatic	0	0.256427483796118	0.383560718695963
14	99926511	99928984	6	gain	AAABBB	29.1217	germline	1	0.0832765783679934	0.270057853024022
14	101613097	101618043	2	neutral	AA	54.5693	somatic	0	0.965492997085596	0.99215719118171
14	101825775	101872762	2	neutral	AA	54.579	somatic	0	0.0187459182726581	0.0204593522161923
14	104251788	104264153	2	neutral	AA	27.2843	somatic	0	0.201263202880631	0.195684461719891
14	104959066	104993688	2	neutral	AA	36.3983	somatic	0	0.00851528159505121	0.0188018899450325
14	105330016	105354746	2	neutral	AA	11.505	somatic	0	0.174033357949228	0.369689626376745
15	0	17081011	5	gain	-	-1	somatic	0	NA	NA
15	17081011	17083484	9	gain	-	-1	germline	1	0.0832705472116976	0.270047378341287
15	17083484	20340425	5	gain	-	-1	somatic	0	0.886725648471459	0.988281977681131
15	20340425	20342898	11	gain	-	-1	germline	1	0.0832687379338078	0.270044235994298
15	20342898	20357736	4	gain	-	-1	germline	1	2.21140657833532e-05	1.22973679087535e-05
15	20357736	20379993	5	gain	-	-1	somatic	0	NA	NA
15	20379993	20382466	3	gain	-	-1	germline	1	0.0839922612986137	0.271299101277659
15	20382466	20671807	5	gain	-	-1	germline	1	1.97532708877133e-11	1.87516668859189e-13
15	22224851	22271838	3	gain	AAB	1.51335	germline	1	1.00612410860479e-06	2.54739657701286e-07
15	35818932	35865919	2	neutral	AA	100	somatic	0	0.758561621763567	0.667761801194607
15	40502794	40554727	2	neutral	AA	95.4206	somatic	0	0.762884461908444	0.523186955604632
15	48218554	48579612	2	neutral	AA	15.3321	somatic	0	2.16609100866582e-15	1.35479405471983e-11
15	51589253	51606564	2	neutral	AA	21.8271	germline	1	0.90232490039984	0.956131852265486
15	56406657	56414076	1	loss	A	-1	germline	1	0.0072899082525756	0.0094768029286032
15	61634579	61646944	2	neutral	AA	100	somatic	0	0.796976963575659	0.717993992237528
15	63182677	63222245	2	neutral	AA	54.5678	somatic	0	0.187870920395514	0.23309460965585
15	68793914	68803806	2	neutral	AA	100	germline	1	0.834576301272013	0.859600584499358
15	76180765	76262374	2	neutral	AA	3.12863	somatic	0	0.942389754393984	0.994469112863704
15	76591283	76593756	1	loss	A	-1	germline	1	0.0833526012598989	0.270189859437521
15	97159224	97225995	2	neutral	AA	27.4152	somatic	0	0.730592776136448	0.948367974225658
15	99877051	99881997	1	loss	A	-1	germline	1	0.0258157621185114	0.0536693283241552
16	158272	180529	2	neutral	AA	5.19531	somatic	0	0.00749497050862978	0.0174379253037455
16	845766	848239	4	gain	AABB	5.93386	germline	1	0.0832868321457929	0.27007566066531
16	1023822	1026295	6	gain	AAAABB	8.39763	germline	1	0.0832771815030846	0.270058900508607
16	2789544	2811801	2	neutral	AA	36.3786	somatic	0	0.663406833667248	0.622423603864976
16	7419000	7478352	2	neutral	AA	56.1376	somatic	0	0.00238390637138422	0.0011751338863415
16	13757299	13782029	2	neutral	AA	100	somatic	0	0.959962365063144	0.922113204342885
16	19934853	19954637	1	loss	A	-1	germline	1	2.12324661225908e-06	9.51481133770748e-07
16	21557141	21581871	4	gain	AABB	2.58009	germline	1	4.32902049387037e-08	4.12876177691146e-09
16	21715413	21720359	2	neutral	AA	100	somatic	0	0.680060131680479	0.770647708444782
16	22615585	22699667	4	gain	AABB	2.14666	germline	1	1.15731900185e-22	0
16	25328466	25333412	1	loss	A	-1	germline	1	0.0197052441884725	0.0532836313334603
16	34063102	34065575	9	gain	AAAAAABBB	2.08349	germline	1	0.0832699441155293	0.270046330889325
16	34075467	34082886	2	neutral	AA	36.6839	germline	1	0.0547153934056666	0.0911287695083658
16	34082886	34085359	6	gain	AAAABB	47.2782	germline	1	0.0832771815030846	0.270058900508607
16	34095251	34100197	6	gain	AAAAAA	2.16663	germline	1	0.0143098751165815	0.0366370707500189
16	34901449	34903922	4	gain	-	-1	somatic	0	0.0832820067112023	0.270067280492054
16	34903922	34953382	2	neutral	AA	0.693743	germline	1	0.000222676087060328	0.00340168182595957
16	34955855	34958328	2	neutral	AA	21.905	germline	1	0.725954021720961	0.862768279723708
16	35232831	35237777	3	gain	-	-1	germline	1	0.0143357827584808	0.036688689470274
16	35237777	35462820	3	gain	AAB	4.65147	germline	1	1.20146307584465e-58	0
16	35462820	35497442	3	gain	-	-1	germline	1	9.32989678576542e-09	5.78230352488163e-10
16	35497442	35524645	3	gain	AAB	38.2853	germline	1	9.57687185836019e-09	6.64702848318655e-10
16	36024191	36088489	2	neutral	AA	21.9472	germline	1	0.354591489950508	0.743177229760072
16	36123111	36125584	5	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
16	48475746	48478219	1	loss	A	-1	germline	1	0.083297086946291	0.270093469163694
16	48960454	48972819	2	neutral	AA	54.5678	germline	1	0.633872950921448	0.610728679699283
16	55165211	55172630	2	neutral	AA	100	somatic	0	0.925994025357841	0.927443496608128
16	55325956	55345740	2	neutral	AA	54.5755	somatic	0	0.367930063391361	0.593401254841489
16	55766150	55788407	1	loss	A	-1	germline	1	0.000213846262423632	0.00019311380488396
16	57291991	57294464	0	loss	-	-1	germline	1	0.0832705472116976	0.270047378341276
16	58244096	58256461	2	neutral	AA	36.4221	somatic	0	0.686829216191487	0.79784690324341
16	58736223	58756007	2	neutral	AA	100	somatic	0	0.173333410364062	0.125192199428875
16	60153252	60212604	2	neutral	AA	36.3829	somatic	0	0.0194966817042669	0.0148169894800505
16	60336254	60341200	2	neutral	AA	54.5678	somatic	0	0.465301295146827	0.522740841308085
16	65321822	65324295	1	loss	A	-1	germline	1	0.0833399268755275	0.270167855098724
16	70149118	70163956	4	gain	AABB	1.75749	germline	1	2.21162467961942e-05	1.22988109448885e-05
16	73739914	73890767	2	neutral	AA	34.1314	somatic	0	0.72800786358533	0.118430038825548
16	76504728	76507201	0	loss	-	-1	somatic	0	0.0832723565214328	0.270050520714956
16	78364424	78384208	2	neutral	AA	54.568	germline	1	0.844016365668354	0.911606397983673
16	78705698	78844186	2	neutral	AA	100	somatic	0	8.13505243788957e-06	1.08431429165501e-05
16	81730177	81737596	2	neutral	AA	54.5678	somatic	0	0.966858296320701	0.917078432127186
16	84124041	84190812	2	neutral	AA	36.381	somatic	0	0.783981714524072	0.990019148806602
17	8348848	8405727	2	neutral	AA	54.5873	somatic	0	0.224817520134059	0.272539473883083
17	13354200	13359146	2	neutral	AA	100	somatic	0	0.442495140608236	0.694737862381271
17	14286521	14288994	1	loss	A	-1	somatic	0	0.0833019130886551	0.270101849930107
17	21290057	21304895	4	gain	AABB	0.297878	germline	1	2.21203367471146e-05	1.23028523095758e-05
17	21851428	21856374	3	gain	-	-1	germline	1	0.0143144440500453	0.0366456694549379
17	21856374	21858847	5	gain	-	-1	germline	1	0.0832795940788348	0.270063090476605
17	21858847	21923145	3	gain	-	-1	somatic	0	1.27384999142738e-16	1.11022302462516e-16
17	21967659	21989916	9	gain	-	-1	somatic	0	0.000107544605848083	9.08273879955956e-05
17	22123458	22158080	6	gain	AAAABB	0.591045	germline	1	9.14570789948218e-11	1.38522526782481e-12
17	22158080	22160553	3	gain	AAB	3.2085	germline	1	0.0832910545868437	0.270082993472611
17	26782590	26841942	3	gain	-	-1	somatic	0	7.38458598452232e-16	0
17	26841942	26846888	1	loss	A	-1	somatic	0	0.0286349633188071	0.0573312522218974
17	26864199	26869145	4	gain	-	-1	germline	1	0.0143116834988976	0.03664136988179
17	26869145	26879037	3	gain	-	-1	germline	1	0.000655529121436247	0.00110889666556502
17	26935916	26940862	11	gain	AAAAAAAAAAA	4.55908	germline	1	0.0143072104995152	0.0366330586252198
17	42013797	42026162	2	neutral	AA	54.5678	somatic	0	0.14661784999277	0.248398160786042
17	51262817	51272709	2	neutral	AA	54.5678	germline	1	0.861072739440142	0.958185865522244
17	64327676	64441434	2	neutral	AA	54.7869	somatic	0	0.862653767925545	0.736770520779386
17	79502004	79521788	2	neutral	AA	100	somatic	0	0.389053010419877	0.755777341266789
17	80743450	80745923	4	gain	AAAB	3.9176	germline	1	0.0832820067112023	0.270067280492054
17	82585835	82588308	6	gain	AAAABB	100	germline	1	0.0832771815030846	0.270058900508607
18	2846423	2895883	2	neutral	AA	51.8444	somatic	0	0.00211117913463937	0.00851783888257374
18	5084488	5133948	2	neutral	AA	31.6574	somatic	0	0.420778028348434	0.190405490335229
18	7144497	7146970	3	gain	AAB	34.7042	germline	1	0.0833007065318298	0.27009975472072
18	21524992	21633804	2	neutral	AA	100	somatic	0	0.00581370386784315	0.00120288696210613
18	28657124	28756044	2	neutral	AA	37.2903	somatic	0	0.0186075599995602	0.0502791651073771
18	29594391	29596864	0	loss	-	-1	germline	1	0.0832862289540836	0.270074613133262
18	29596864	29599337	2	neutral	AA	100	somatic	0	0.127331216312067	0.339745593710094
18	31169692	31177111	2	neutral	AA	100	somatic	0	0.692092331830412	0.884814206000991
18	34960801	34990477	2	neutral	AA	36.3787	somatic	0	0.338549662803986	0.34122695894276
18	39807881	39837557	2	neutral	AA	100	somatic	0	0.566076447140486	0.565117119463466
18	41284262	41289208	0	loss	-	-1	germline	1	0.0143097799441487	0.0366405100201238
18	45231170	45241062	2	neutral	AA	54.5873	somatic	0	0.642752565953903	0.494289017428286
18	56260750	56263223	1	loss	A	-1	somatic	0	0.0877916258773799	0.27781354908503
18	57279626	57282099	1	loss	A	-1	germline	1	0.0833007065318298	0.270099754720709
18	61090519	61107830	3	gain	AAA	100	germline	1	4.62370624413666e-06	1.67853983379374e-06
18	64342514	64367244	2	neutral	AA	54.5703	germline	1	0.912314289804154	0.420225173758058
18	66098344	66103290	1	loss	A	-1	germline	1	0.0151018795303561	0.0382248671446
18	74615356	74617829	3	gain	-	-1	germline	1	0.0832898481574209	0.270080898369982
18	79519315	79524261	1	loss	A	-1	germline	1	0.0251593610855761	0.0586512286796175
18	79863062	79966928	2	neutral	AA	91.2541	somatic	0	0.000960018694925085	0.000140272749206027
19	4295601	4300547	4	gain	AABB	100	somatic	0	0.014313016120124	0.0366430896580817
19	4384629	4431616	2	neutral	AA	54.5678	germline	1	0.0858171172774632	0.0753145234577884
19	7448676	7451149	12	gain	AAAAAAAABBBB	7.39535	somatic	0	0.0832687379338078	0.270044235994298
19	7582218	7646516	2	neutral	AA	17.5994	somatic	0	0.124891324959296	0.210848309080671
19	8254874	8264766	2	neutral	AA	100	somatic	0	0.498443507423195	0.750652578581245
19	8880543	8910219	2	neutral	AA	1.10405	germline	1	0.482907785853736	0.509543002573786
19	9419657	9439441	2	neutral	AA	54.5678	somatic	0	0.736451321133195	0.723785838994937
19	13220658	13235496	2	neutral	AA	36.3788	somatic	0	0.0743774712751702	0.10695264517512
19	13574297	13581716	2	neutral	AA	36.383	somatic	0	0.576697291671049	0.411472747006629
19	16175893	16195677	2	neutral	AA	54.5873	somatic	0	0.0534564838107285	0.117434156319795
19	19210264	19239940	2	neutral	AA	42.3604	somatic	0	0.063232161378862	0.0535567098374135
19	21559614	21586817	2	neutral	AA	0.273358	somatic	0	0.0029606548708394	0.00978448096279605
19	22407853	22437529	2	neutral	AA	2.39944	somatic	0	0.000473577372165086	0.000638211604031436
19	23654245	23678975	2	neutral	AA	54.5683	somatic	0	0.00490437653643364	0.0219868445406601
19	24329374	24406037	4	gain	AABB	0.338801	germline	1	4.9791647052112e-20	0
19	24415929	24418402	2	neutral	AA	7.90955	germline	1	0.0926866957867282	0.28603912000247
19	27242568	27319231	2	neutral	AA	2.71167	germline	1	0.756151001917875	0.703543890858284
19	27336542	27346434	3	gain	AAB	1.36243	germline	1	0.00641792327806005	0.022277867080722
19	27346434	27378583	6	gain	AAAABB	0.159145	germline	1	1.97654674069197e-09	7.56090745568372e-11
19	27378583	27383529	4	gain	AAAB	4.16813	germline	1	0.0143118738666573	0.03664136988179
19	27383529	27388475	6	gain	AAAABB	0.616961	germline	1	0.0143097799441487	0.0366370707500189
19	27388475	27393421	5	gain	AAABB	1.38707	germline	1	0.0143106365161454	0.036638217142003
19	27393421	27398367	6	gain	AAAABB	0.761086	germline	1	0.0143098751165815	0.0366370707500189
19	27398367	27400840	3	gain	AAB	3.51167	germline	1	0.0832868321457929	0.27007566066531
19	27470084	27472557	0	loss	-	-1	germline	1	0.0832717534146493	0.270049473254097
19	29510309	29515255	1	loss	A	-1	germline	1	0.019630944852137	0.0530302002843933
19	32163838	32183622	2	neutral	AA	44.1631	somatic	0	0.360818758778599	0.707167989231696
19	36348154	36355573	1	loss	A	-1	germline	1	0.00528118460242315	0.00946273878526172
19	40856433	40863852	1	loss	A	-1	germline	1	0.00446626883964752	0.00698091733916162
19	51107018	51114437	2	neutral	AA	54.5678	somatic	0	0.160212476926753	0.240055379908088
19	51116910	51119383	2	neutral	AA	100	somatic	0	0.580802759877334	0.777316422134602
19	51631294	51643659	1	loss	A	-1	germline	1	0.000293068338594655	0.000251301618380162
19	52378140	52385559	2	neutral	AA	36.3786	somatic	0	0.628284274143993	0.77732060686295
19	53016174	53048323	3	gain	AAB	2.07198	germline	1	1.99667761123987e-09	7.90847387577287e-11
19	55956571	55971409	2	neutral	AA	42.6372	somatic	0	0.653078141755154	0.663805383937358
19	57660468	57806375	2	neutral	AA	48.1197	somatic	0	0.598874445686483	0.541836745188922
19	58345489	58352908	2	neutral	AA	36.3786	somatic	0	0.148404126958503	0.147477887756387
20	64298	66771	6	gain	-	-1	germline	1	0.0832765783679934	0.270057853024022
20	28773355	28788193	6	gain	-	-1	germline	1	0.00270075827719146	0.00495875513052868
20	28803031	28832707	8	gain	-	-1	somatic	0	2.03628443128207e-07	3.04937541883987e-08
20	29263009	29265482	9	gain	-	-1	germline	1	0.0832711503114042	0.270048425796215
20	29265482	29314942	3	gain	-	-1	somatic	0	2.99437508406269e-10	5.29263299853255e-11
20	29408916	29411389	5	gain	-	-1	germline	1	0.0832795940788348	0.270063090476605
20	29876313	29878786	7	gain	-	-1	germline	1	0.0832747689839509	0.270054710588062
20	29886205	29888678	3	gain	-	-1	germline	1	0.0832904513703629	0.270081945919814
20	29891151	29893624	7	gain	-	-1	germline	1	0.0832741658630137	0.270053663115339
20	30939703	30942176	6	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
20	31053461	31055934	40	gain	-	-1	germline	1	0.0832663256128247	0.270040046239833
20	31162273	31172165	3	gain	-	-1	germline	1	0.00061631631739006	0.000945009620497705
20	31184530	31189476	15	gain	-	-1	germline	1	0.0143083524246586	0.0366370707500189
20	31189476	31241409	3	gain	-	-1	somatic	0	1.37376590856152e-06	6.84847536236433e-07
20	31241409	31243882	34	gain	-	-1	germline	1	0.083266928687763	0.270041093674001
20	31451614	31463979	1	loss	A	-1	germline	1	0.000199315859477884	0.00021759188325654
20	37371976	37384341	2	neutral	AA	54.5678	somatic	0	0.297761127445685	0.228744004121861
20	38707396	38771694	2	neutral	AA	62.2362	somatic	0	0.100190487218685	0.037957656443171
20	44652488	44692056	2	neutral	AA	54.6202	somatic	0	0.646414376072277	0.890657243337308
20	47412356	47437086	2	neutral	AA	53.7211	somatic	0	0.133586234373355	0.166439458356097
20	48344677	48354569	2	neutral	AA	54.5679	somatic	0	0.767440342157099	0.555818453058096
20	52031920	52059123	2	neutral	AA	100	germline	1	0.0131523314917562	0.00575102850646869
20	53557761	53572599	2	neutral	AA	100	somatic	0	0.0521477215895975	0.167530167440615
20	56938352	56980393	2	neutral	AA	100	somatic	0	0.743736008826343	0.401399983652967
20	57047164	57059529	2	neutral	AA	56.5794	somatic	0	0.81516809716532	0.922523028679373
20	61409536	61414482	2	neutral	AA	100	somatic	0	0.265031447601303	0.244913496952653
20	62064881	62067354	1	loss	A	-1	germline	1	0.0902600652857491	0.28198146292017
20	62376479	62398736	2	neutral	AA	29.1928	germline	1	0.97977945093077	0.263433372624159
21	8989355	8996774	9	gain	AAAAAABBB	1.64892	germline	1	0.00270032479881629	0.00495840602623954
21	10651211	10653684	4	gain	AAAB	61.8191	germline	1	0.0832820067112023	0.270067280492054
21	10653684	10661103	6	gain	AAAABB	8.22743	germline	1	0.00270096636939607	0.00495898787923832
21	10661103	10690779	4	gain	AAAA	3.32664	germline	1	9.23400919991233e-09	5.58722290655567e-10
21	10690779	10693252	38	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	16.8139	germline	1	0.0832663256128247	0.270040046239833
21	10693252	10703144	4	gain	AABB	50.7027	germline	1	0.000532405929571997	0.000671250738177309
21	10703144	10708090	6	gain	AAAAAA	2.16114	germline	1	0.0143098751165815	0.0366370707500189
21	10708090	10715509	4	gain	AAAA	3.31668	germline	1	0.00270131322229457	0.00495922063796206
21	10715509	10717982	7	gain	AAAABBB	2.74076	germline	1	0.0832747689839509	0.270054710588062
21	10717982	10737766	5	gain	AAABB	6.35385	germline	1	9.64699448019112e-07	2.25295825773131e-07
21	10752604	10755077	12	gain	AAAAAAAABBBB	3.17074	germline	1	0.0832687379338078	0.270044235994298
21	10762496	10764969	4	gain	AABB	30.3649	germline	1	0.0832820067112023	0.270067280492054
21	14034275	14039221	2	neutral	AA	100	somatic	0	0.401947619318876	0.644190444368607
21	14088681	14105992	2	neutral	AA	55.4235	germline	1	0.0201237280151932	0.0394610130771904
21	14105992	14108465	1	loss	A	-1	somatic	0	0.125694582470618	0.337355757660005
21	15837092	15861822	2	neutral	AA	37.0878	somatic	0	0.87821433770226	0.832316203747409
21	18574703	18599433	2	neutral	AA	100	germline	1	0.691739631001151	0.995405158925972
21	18700826	18720610	2	neutral	AA	100	somatic	0	0.0156429844673277	0.040150079884385
21	24678067	24680540	2	neutral	AA	54.5679	germline	1	0.317420086536559	0.562789979198557
21	29725460	29760082	2	neutral	AA	54.8213	germline	1	0.270972590224532	0.127637467144026
21	30628105	30818526	2	neutral	AA	64.8348	somatic	0	0.101808715226792	0.092147801550595
21	33190133	33197552	2	neutral	AA	30.639	germline	1	0.921795401893914	0.998468417327705
21	35566686	35635930	2	neutral	AA	36.742	somatic	0	0.000264038812254391	0.00125086156071208
21	36548467	36553413	2	neutral	AA	54.5693	somatic	0	0.779245188428435	0.703658682841472
21	36966404	36978769	2	neutral	AA	100	somatic	0	0.377991815323862	0.566750642951271
21	43262662	43265135	3	gain	AAB	100	germline	1	0.083297086946291	0.270093469163706
21	44464540	44506581	2	neutral	AA	17.398	somatic	0	0.869896888845152	0.625293259000161
21	44506581	44511527	2	neutral	AA	100	somatic	0	0.599804379344104	0.85929529325735
21	45025911	45030857	2	neutral	AA	36.3786	somatic	0	0.155785764961408	0.354697146591563
22	11620627	11630519	4	gain	AABB	8.94422	germline	1	0.00270148666400626	0.00495945340670023
22	17874844	17877317	4	gain	AAAA	4.66813	germline	1	0.0832850225812811	0.270072518078096
22	18730502	18732975	25	gain	AAAAAAAAAAAAAAAAAAAAAAAAB	8.4758	germline	1	0.0832675317662396	0.270042141111134
22	25687051	25701889	2	neutral	AA	36.3786	somatic	0	0.864546912630684	0.955256873882237
22	29119575	29122048	3	gain	AAB	8.13345	germline	1	0.0832916578068635	0.270084041028375
22	36746307	36751253	1	loss	A	-1	germline	1	0.020670313397562	0.0552993274691108
22	37695939	37873995	2	neutral	AA	100	germline	1	0.0417292675622086	0.08206858778431
22	41610698	41615644	2	neutral	AA	54.5678	germline	1	0.0766665062477966	0.103255178768424
22	42800211	42812576	2	neutral	AA	100	somatic	0	0.690194868582987	0.619694530323449
22	42889239	42896658	2	neutral	AA	100	somatic	0	0.745022145395611	0.831191838896866
22	44617866	44642596	2	neutral	AA	73.6357	somatic	0	0.530108717533504	0.599323334202892
22	44739043	44741516	0	loss	-	-1	somatic	0	0.083266928687763	0.27004109367399
22	44946775	44951721	2	neutral	AA	54.568	somatic	0	0.39540189316607	0.426042094047641
22	45327617	45330090	4	gain	AABB	28.3168	somatic	0	0.0832832130486178	0.270069375517573
22	45589755	45646634	2	neutral	AA	38.2943	somatic	0	0.907341764212313	0.835601324069007
22	46940013	46942486	1	loss	A	-1	somatic	0	0.088310249511918	0.278693487264662
22	50644567	50666824	3	gain	AAB	30.8467	germline	1	2.04321811398152e-07	3.06088212553846e-08
X	26792482	26802374	2	gain	AB	100	germline	1	0.905623405961472	0.962993621249769
X	70915748	70920694	0	loss	-	-1	germline	1	0.0143080669358355	0.0366356378041693
X	78267977	78270450	3	gain	-	-1	germline	1	0.0833115660528967	0.270118612032381
X	155687715	155692661	0	loss	-	-1	germline	1	0.0143085427533322	0.0366356378041693
Y	3845515	3852934	2	gain	AB	0.54502	germline	1	0.759862190671585	0.943409042433991
Y	10656157	10658630	4	gain	-	-1	germline	1	0.0832814035478025	0.270066232983743
Y	10752604	10757550	4	gain	-	-1	germline	1	0.014313016120124	0.0366419431327072
Y	10757550	10760023	5	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
Y	10760023	10764969	4	gain	-	-1	germline	1	0.0143122546088778	0.0366419431327072
Y	10764969	10774861	2	gain	-	-1	germline	1	0.285030017516867	0.534999971716245
Y	10774861	10777334	4	gain	-	-1	germline	1	0.0832820067112023	0.270067280492054
Y	10777334	10794645	2	gain	-	-1	germline	1	0.00182873040177511	0.00109022383329027
Y	10794645	10797118	5	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
Y	10797118	10802064	3	gain	-	-1	germline	1	0.0143780664974229	0.0368373038971853
Y	10802064	10900984	2	gain	-	-1	somatic	0	0.013061177028562	6.51472250464691e-05
Y	10923241	10928187	3	gain	-	-1	germline	1	0.0143187285938171	0.0366568504110308
Y	10928187	10955390	2	gain	-	-1	germline	1	0.509309866317091	0.463131901564671
Y	10957863	10960336	4	gain	-	-1	germline	1	0.083285625765913	0.270073565604201
Y	10962809	10985066	2	gain	-	-1	germline	1	0.877573149978187	0.155428090357188
Y	10985066	10987539	4	gain	-	-1	germline	1	0.0832820067112023	0.270067280492054
Y	10987539	10990012	6	gain	-	-1	germline	1	0.0832771815030846	0.270058900508607
Y	10990012	10997431	2	gain	-	-1	germline	1	0.410977451397228	0.309811034739669
Y	10997431	10999904	6	gain	-	-1	germline	1	0.0832759752364407	0.270056805542403
Y	10999904	11039472	2	gain	AA	13.9256	germline	1	0.0055246056509849	0.000438163173690609
Y	11291718	11306556	26	gain	AAAAAAAAAAAAAAAAABBBBBBBBB	4.48099	germline	1	2.20949906515145e-05	1.22907320319054e-05
Y	11306556	11309029	4	gain	AABB	13.1014	germline	1	0.0832826098781407	0.270068328003331
Y	11313975	11333759	8	gain	AAAAABBB	1.44787	germline	1	0.000532178035342949	0.000671156228035374
Y	11687398	11689871	3	gain	AAA	20.112	germline	1	0.0833622589816154	0.270206625525968
Y	11689871	11692344	4	gain	AAAB	79.5628	germline	1	0.0832820067112023	0.270067280492054
Y	11717074	11719547	4	gain	AAAB	100	germline	1	0.0832850225812811	0.270072518078096
Y	11719547	11724493	19	gain	AAAAAAAAAAAAABBBBBB	100	germline	1	0.014306925030791	0.0366327720595876
Y	11724493	11746750	2	gain	AB	100	germline	1	0.825937165014897	0.214528460343641
Y	11746750	11749223	10	gain	AAAAAABBBB	68.1877	germline	1	0.0832687379338078	0.270044235994298
Y	26636683	26656467	2	gain	AA	7.5532	germline	1	0.847216836650485	0.710829095780521
Y	56827067	56836959	23	gain	AAAAAAAAAAAAAAABBBBBBBB	2.62135	germline	1	0.000532080872808676	0.000671009237054432
Y	56836959	56851797	7	gain	AAAAABB	1.04007	germline	1	0.000532224947311033	0.00067119823100259
