chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5667750	5672788	4	gain	AABB	1.20503	somatic	0	0.0143234231529193	0.0366703850104585
1	8340409	8864361	2	neutral	AA	100	somatic	0	4.30580386762123e-09	3.64905883287747e-08
1	15383533	15469179	2	neutral	AA	13.6927	somatic	0	0.343430943116906	0.460599414425809
1	16605248	16726160	8	gain	AAAAABBB	2.48514	germline	1	4.59757361452242e-06	1.66494658715433e-06
1	16726160	16882338	8	gain	AAAAABBB	-1	germline	1	NA	NA
1	16882338	16942794	3	gain	AAB	0.865839	germline	1	4.28625761995268e-10	1.03403952067538e-11
1	31429563	31432082	5	gain	AAAAA	100	somatic	0	0.0832923051559419	0.270085152780391
1	31432082	31555513	2	neutral	AA	11.7568	somatic	0	0.466272077980542	0.247688100237666
1	32689063	32724329	2	neutral	AA	50.9894	somatic	0	0.000410902014293445	0.00187225660635537
1	36127498	36157726	2	neutral	AA	27.2839	somatic	0	0.189862910823328	0.162801955622152
1	41566019	41702045	2	neutral	AA	35.296	somatic	0	1.18364357987513e-07	8.40646918742749e-09
1	46601500	46689665	2	neutral	AA	52.5229	somatic	0	0.697506741089967	0.0680630286414134
1	55662343	55667381	1	loss	A	-1	somatic	0	0.0143969758968432	0.0369024308004449
1	63141254	63284837	2	neutral	AA	15.8242	somatic	0	0.000520757031001818	8.21146933739358e-05
1	63720624	63733219	2	neutral	AA	54.5678	somatic	0	0.496746136613997	0.647299518690806
1	72290262	72345680	1	loss	A	-1	germline	1	2.31885401194304e-14	1.11022302462516e-16
1	103193354	103223582	2	neutral	AA	16.5386	somatic	0	0.669714728944189	0.973602227687374
1	125080945	125083464	6	gain	-	-1	somatic	0	0.0832892171428909	0.270079790101139
1	152583387	152613615	1	loss	A	-1	somatic	0	2.27278864396646e-08	9.80383219051362e-10
1	222556169	222687157	2	neutral	AA	22.6335	somatic	0	0.142806772661689	0.139028396044625
1	224012151	224014670	7	gain	AAAAAAA	1.39842	germline	1	0.0832848940804227	0.270072282480761
1	234775838	234783395	6	gain	AAAABB	2.38294	germline	1	0.00270193546798831	0.00495997657532754
1	236095794	236098313	6	gain	AAAABB	65.7509	somatic	0	0.0832873643795757	0.270076572530895
1	248584996	248630338	1	loss	A	-1	germline	1	9.25113798399241e-12	2.22044604925031e-14
2	3178978	3181497	8	gain	-	-1	germline	1	0.0832737784687027	0.270052977870721
2	20101620	20131848	2	neutral	AA	27.2839	somatic	0	0.408178788137866	0.250598249421718
2	34472515	34505262	1	loss	A	-1	germline	1	1.17017608406093e-08	8.8206419945891e-10
2	36716944	36727020	2	neutral	AA	72.2867	somatic	0	0.167369063584457	0.522924660284823
2	37162807	37346694	2	neutral	AA	29.0672	somatic	0	0.415016057035201	0.175973612849627
2	41372056	41387170	2	neutral	AA	5.19701	somatic	0	0.170469929045438	0.397262588355601
2	53992246	54062778	2	neutral	AA	21.8271	somatic	0	0.0227099683112381	0.129253140625214
2	64559451	64574565	2	neutral	AA	36.3786	somatic	0	0.236560951377788	0.462140838543478
2	69322880	69436235	2	neutral	AA	100	somatic	0	3.02548421203364e-08	2.3200922294464e-09
2	73312976	73902422	2	neutral	AA	16.0213	somatic	0	0.85388300347327	0.302119084305074
2	88918181	89003827	2	neutral	AA	0.384023	somatic	0	0.0099030174981207	0.0461094046314219
2	89772122	89789755	4	gain	-	-1	germline	1	2.21338955387041e-05	1.23073357664039e-05
2	89789755	89797312	3	gain	AAA	96.321	germline	1	0.1170569104852	0.139764905818529
2	89797312	89825021	4	gain	AAAA	2.3613	germline	1	3.24559746230624e-06	1.84720850171516e-07
2	89825021	89842654	26	gain	AAAAAAAAAAAAAAAAABBBBBBBBB	4.25925	germline	1	4.59428825511782e-06	1.66378020138858e-06
2	89842654	89850211	4	gain	AABB	11.9353	germline	1	0.0027024683468302	0.00496069166716862
2	96598612	96820284	2	neutral	AA	53.5442	somatic	0	6.50612805068382e-05	0.000863046880183238
2	123395734	123506570	2	neutral	AA	22.1875	somatic	0	0.229362505261871	0.359772567161958
2	124121206	124171586	2	neutral	AA	36.3786	somatic	0	0.783220375775764	0.642240541692618
2	129340574	129524461	2	neutral	AA	74.0499	somatic	0	0.0154515264946193	0.0904316651915533
2	134615360	135116641	2	neutral	AA	18.0547	somatic	0	0.423712460989767	0.425858171615243
2	135116641	135119160	5	gain	AAAAB	25.0045	somatic	0	0.0832910699395926	0.270083007699364
2	138076466	138187302	2	neutral	AA	100	somatic	0	0.00115187253219433	0.00282616551195469
2	158558455	158659215	2	neutral	AA	55.0709	somatic	0	0.00323533226084185	0.00180315909794748
2	169707549	170067766	2	neutral	AA	9.32621	somatic	0	9.59447058901392e-10	7.73081876292991e-09
2	170755453	170783162	2	neutral	AA	27.2964	somatic	0	0.262148246127655	0.191936320864773
2	172138384	172143422	1	loss	A	-1	somatic	0	0.0160103838235805	0.041797925879937
2	176400532	176408089	0	loss	-	-1	germline	1	0.0143592538770553	0.0367909596935345
2	190864630	190952795	2	neutral	AA	100	somatic	0	0.598285518213858	0.302796338454043
2	191444000	191454076	2	neutral	AA	27.2849	somatic	0	0.256581019137398	0.368768616353414
2	194439091	194479395	2	neutral	AA	100	somatic	0	0.569206173188421	0.669068625033424
2	196323303	196424063	2	neutral	AA	54.5873	somatic	0	0.137777159549796	0.0828088674929797
2	207484992	207495068	1	loss	A	-1	somatic	0	0.00141285768817588	0.00158262524259856
2	208369161	208424579	2	neutral	AA	62.232	somatic	0	0.323295407704357	0.473476469117269
2	212072091	212094762	1	loss	A	-1	germline	1	1.33318787846704e-06	2.10915247045307e-07
2	218115172	218125248	2	neutral	AA	100	somatic	0	0.523973912341876	0.910609316891908
2	223798036	223929024	2	neutral	AA	19.1551	somatic	0	8.55790985476934e-05	2.35084239450511e-05
2	233413059	233433211	2	neutral	AA	100	somatic	0	0.0911210834501019	0.218379812445104
3	6607337	6612375	1	loss	A	-1	somatic	0	0.0210499607927745	0.0563385618919772
3	13401080	13421232	2	neutral	AA	100	germline	1	0.210614269918868	0.0921951164451531
3	37936140	37946216	1	loss	A	-1	somatic	0	0.00154488065756638	0.00159021135840853
3	39586085	39712035	2	neutral	AA	10.8787	somatic	0	0.244014467506641	0.446303225274025
3	46951641	46959198	2	neutral	AA	100	germline	1	0.57627064598657	0.638924827916362
3	47447884	47452922	1	loss	A	-1	somatic	0	0.0159904940968596	0.0415739367603216
3	52992203	53004798	1	loss	A	-1	somatic	0	0.000250456521041597	0.000245798864247027
3	68743510	68783814	2	neutral	AA	36.3786	somatic	0	0.000430312993511004	0.000298617876560825
3	74766439	75864723	2	neutral	AA	0.686499	germline	1	7.98166424256744e-08	3.82716667801652e-07
3	77779163	77784201	3	gain	AAB	1.39843	somatic	0	0.0143320075203942	0.0366815456700136
3	80010997	80016035	1	loss	A	-1	somatic	0	0.0198550247837465	0.0537490370608538
3	83993536	84011169	2	neutral	AA	100	somatic	0	0.254154462600788	0.314624795689747
3	87472275	87494946	2	neutral	AA	27.2852	somatic	0	0.273563665875279	0.529818057869332
3	90348973	90416986	2	neutral	AA	2.0341	somatic	0	0.245484825373848	0.640155307164383
3	90535379	90537898	0	loss	-	-1	somatic	0	0.083279953660172	0.270063702529707
3	98686863	98694420	1	loss	A	-1	somatic	0	0.00608810464133614	0.0107053864855817
3	104359651	104551095	1	loss	A	-1	germline	1	3.65835001449446e-43	0
3	105271529	105311833	2	neutral	AA	100	somatic	0	0.456569931573509	0.639088826519647
3	107863580	107891289	2	neutral	AA	36.3786	somatic	0	0.812816694363594	0.92681598951031
3	125252237	125426048	2	neutral	AA	34.7965	somatic	0	0.0257265473956786	0.00220868771563809
3	139114294	139116813	0	loss	-	-1	somatic	0	0.0832836589531033	0.270070137474334
3	157825426	157860692	2	neutral	AA	100	somatic	0	0.215530297383322	0.374663878087068
3	162792894	162906249	1	loss	A	-1	germline	1	8.04805330749931e-27	0
3	188932557	189078659	2	neutral	AA	11.3196	somatic	0	0.0405765968002213	0.0165987177986128
3	196053770	196066365	2	neutral	AA	27.2839	somatic	0	0.0432678958311615	0.124783210299214
3	196993357	197801956	2	neutral	AA	4.51738	germline	1	0.00278712845877335	0.00211938720038518
4	125950	133507	0	loss	-	-1	germline	1	0.0144187877664012	0.0369704016055459
4	10209507	10232178	1	loss	A	-1	germline	1	1.2326147841113e-06	1.83133504805255e-07
4	40293924	40296443	5	gain	-	-1	germline	1	0.0832910699395926	0.270083007699364
4	42760025	42767582	1	loss	A	-1	somatic	0	0.00463598758569781	0.00944373140957611
4	43450231	43452750	0	loss	-	-1	somatic	0	0.0832750134773221	0.270055122777636
4	49652009	49657047	14	gain	-	-1	somatic	0	0.0143073396878549	0.0366336932720677
4	63828941	63851612	1	loss	A	-1	somatic	0	1.79815920281234e-05	7.04119746419707e-06
4	165080146	165085184	1	loss	A	-1	somatic	0	0.0144573851073651	0.0369760214785778
4	172503639	172513715	1	loss	A	-1	germline	1	0.0204344547766039	0.0555859266421272
5	758219	778371	4	gain	-	-1	germline	1	0.00270245058265508	0.00496093005211573
5	1176373	1181411	1	loss	A	-1	somatic	0	0.0207603644899894	0.0565391990460603
5	1539109	1541628	4	gain	-	-1	somatic	0	0.0833028050940377	0.27010338647122
5	3322561	3325080	4	gain	-	-1	somatic	0	0.0832953932617351	0.270090515537367
5	12811634	12821710	1	loss	A	-1	somatic	0	0.00129290859967934	0.00170159200924747
5	20832130	20834649	4	gain	-	-1	somatic	0	0.083296010894023	0.270091588098088
5	23902791	23905310	0	loss	-	-1	somatic	0	0.0832663687285578	0.27004010869028
5	45372228	45377266	1	loss	A	-1	somatic	0	0.0180106926831079	0.0479752277933164
5	46268992	46276549	1	loss	A	-1	germline	1	0.0160575608254687	0.0419324269337746
5	46405018	46410056	1	loss	A	-1	somatic	0	0.0187687193314952	0.0503456955830895
5	49657047	49659566	250	gain	-	-1	germline	1	0.0832651338237945	0.270037963870413
5	86918095	86923133	1	loss	A	-1	somatic	0	0.0157361754639674	0.0409605988927949
5	91202914	91207952	1	loss	A	-1	somatic	0	0.017798584538189	0.0473018160816668
5	112926770	112944403	1	loss	A	-1	germline	1	1.31723230530407e-05	7.61893351286513e-06
5	135776619	135786695	1	loss	A	-1	somatic	0	0.00223507874377854	0.00214075595216101
5	139605499	139716335	2	neutral	AA	54.5755	somatic	0	0.56800205993819	0.180361844185895
5	143958331	144013749	2	neutral	AA	23.3578	somatic	0	0.482487806818814	0.272194337727601
5	149459827	149464865	2	neutral	AA	100	somatic	0	0.473458248198481	0.773686192624901
5	155885796	156135177	2	neutral	AA	13.6594	somatic	0	0.000221104180745165	0.00604199194945532
5	157936262	158031984	2	neutral	AA	9.25631	germline	1	0.0104182870642743	0.00808813229171468
5	158031984	158049617	2	neutral	AA	54.5678	germline	1	0.257140255770082	0.495191161838324
5	167596627	167616779	2	neutral	AA	36.3786	somatic	0	0.226252982872747	0.334966545968656
5	172244182	172334866	2	neutral	AA	35.7635	germline	1	1.58525708835332e-05	6.77323048581258e-06
5	177382942	177398056	2	neutral	AA	36.3786	somatic	0	0.905333459930095	0.782202266718773
5	178327567	178345200	2	neutral	AA	36.3788	somatic	0	0.0842126627949283	0.0446997486513209
5	178584505	178587024	4	gain	AAAA	7.12405	somatic	0	0.0833028050940377	0.27010338647122
5	178587024	178637404	2	neutral	AA	54.5678	somatic	0	0.0550763435810708	0.138156579766152
5	180949846	181002745	1	loss	A	-1	germline	1	5.80380273634676e-14	1.11022302462516e-16
6	256938	297242	3	gain	AAB	1.87652	germline	1	1.99059070894994e-11	1.88848936488739e-13
6	297242	345103	4	gain	AAAB	18.7121	germline	1	2.01613135686709e-13	4.44089209850063e-16
6	345103	382888	4	gain	AABB	2.74785	germline	1	9.16887484565060e-11	1.38833389229376e-12
6	3433397	3440954	2	neutral	AA	54.5678	somatic	0	0.48464743319916	0.409072297993494
6	3758348	3778500	2	neutral	AA	27.2839	somatic	0	0.873891321808497	0.277820452339548
6	14469136	14529592	2	neutral	AA	36.3786	somatic	0	0.903384700963087	0.977016081124499
6	15680775	15711003	2	neutral	AA	27.2364	somatic	0	0.860008984963657	0.437330559772945
6	16040992	16051068	2	neutral	AA	100	somatic	0	0.665797341803692	0.646719442845481
6	18003293	18010850	2	neutral	AA	36.4059	somatic	0	0.171121954303856	0.443685427286576
6	20958080	20960599	4	gain	-	-1	somatic	0	0.0833040404513599	0.270105531670388
6	21403943	21411500	2	neutral	AA	54.5678	somatic	0	0.744622258108995	0.911333139897118
6	21980794	22003465	2	neutral	AA	100	somatic	0	0.434375512605979	0.55986447280695
6	25852497	25860054	2	neutral	AA	100	somatic	0	0.631920175021786	0.736545652918281
6	32490062	32573189	0	loss	-	-1	germline	1	3.18792143667204e-13	2.52020626589911e-14
6	32573189	32666392	1	loss	A	-1	somatic	0	5.32499596824783e-08	1.82470716314498e-09
6	34066956	34074513	2	neutral	AA	6.55969	germline	1	0.181379673234874	0.160267535615376
6	38900917	38905955	2	neutral	AA	100	somatic	0	0.544281314530122	0.47480942678339
6	41361980	41427474	2	neutral	AA	27.2876	somatic	0	0.218664298509523	0.112404292647076
6	50558849	50581520	2	neutral	AA	54.5678	somatic	0	0.206209716955346	0.506210988593967
6	52531226	52548859	2	neutral	AA	54.5678	somatic	0	0.0769399632151801	0.294626480101523
6	54062778	54070335	0	loss	-	-1	germline	1	0.0143495805899174	0.0367618136008002
6	56740475	56765665	2	neutral	AA	62.2452	somatic	0	0.947265311024949	0.481653267109942
6	60231809	60239366	3	gain	-	-1	germline	1	0.00270500972272951	0.00496552100950132
6	60239366	60241885	5	gain	-	-1	germline	1	0.0832910699395926	0.270083007699364
6	64043056	64048094	2	neutral	AA	36.3786	somatic	0	0.229674444176275	0.499530683141129
6	65541861	65546899	2	neutral	AA	100	somatic	0	0.0863086326075187	0.143097482126095
6	65708115	65735824	2	neutral	AA	100	somatic	0	0.957923469473089	0.829399148497279
6	66300080	66340384	1	loss	A	-1	germline	1	6.41723522933795e-11	8.37330205172293e-13
6	68166659	68194368	2	neutral	AA	54.5873	somatic	0	0.812040524462133	0.917390913919518
6	69214563	69219601	2	neutral	AA	36.3788	germline	1	0.570580239623229	0.830767358853519
6	70589937	70597494	2	neutral	AA	100	somatic	0	0.0351123469782026	0.0488072459380374
6	70872065	70879622	2	neutral	AA	54.5678	somatic	0	0.951927377641707	0.991275878319623
6	73093823	73126570	2	neutral	AA	100	somatic	0	0.725161840712773	0.697758038762595
6	73882270	73892346	1	loss	A	-1	germline	1	0.00118716532140925	0.00129986580371522
6	74000663	74005701	3	gain	AAB	17.7468	somatic	0	0.0143228380203336	0.0366606952691476
6	74708502	74731173	2	neutral	AA	100	somatic	0	0.274118018869843	0.457132857300179
6	76947893	77018425	2	neutral	AA	100	somatic	0	0.655645915711781	0.665374718809855
6	77154451	77167046	1	loss	A	-1	somatic	0	0.00147786011876021	0.0016309410955383
6	78257773	78328305	1	loss	A	-1	germline	1	5.03419143796471e-18	0
6	79237664	79265373	2	neutral	AA	54.5678	somatic	0	0.163724641825769	0.526698358278656
6	84993579	87391667	2	neutral	AA	11.5147	somatic	0	1.5040610100836e-08	2.02820735661913e-06
6	87391667	87847606	2	neutral	AA	54.1956	somatic	0	3.27199930737972e-12	1.74908976191546e-10
6	90867887	90898115	2	neutral	AA	21.8928	somatic	0	0.0108278360590229	0.0926844006981001
6	95250947	95253466	0	loss	-	-1	somatic	0	0.0832750134773221	0.270055122777636
6	98230924	98243519	2	neutral	AA	54.5685	somatic	0	0.412535061211035	0.576949435751884
6	101485472	101495548	1	loss	A	-1	somatic	0	0.00557161184984186	0.00953318935799341
6	101916221	101921259	2	neutral	AA	100	germline	1	0.361589643338719	0.425539629079125
6	103289076	103314266	1	loss	A	-1	germline	1	2.24444791258984e-07	3.33997242085715e-08
6	109039953	109044991	2	neutral	AA	54.5678	somatic	0	0.453226672455761	0.467152883473499
6	109455588	109573981	2	neutral	AA	100	somatic	0	0.923786741129426	0.442750074247118
6	113060277	113455760	2	neutral	AA	16.1003	somatic	0	5.3245824013932e-05	0.00102575262301341
6	113831091	113873914	2	neutral	AA	100	somatic	0	0.755008894194726	0.909578688730419
6	115617062	115627138	2	neutral	AA	100	somatic	0	0.495626091441934	0.626475640349273
6	118644900	118647419	4	gain	AAAA	8.3873	somatic	0	0.0832923051559419	0.270085152780391
6	119566854	119589525	2	neutral	AA	100	somatic	0	0.0622914950423138	0.103710391070293
6	125670391	125688024	2	neutral	AA	54.5678	somatic	0	0.262271413478207	0.650975441213812
6	129791475	129801551	2	neutral	AA	54.5678	somatic	0	0.127238373580802	0.26597831196032
6	134577575	134605284	2	neutral	AA	3.84124	germline	1	0.190735449452541	0.148800806966424
6	139116813	139144522	2	neutral	AA	100	somatic	0	0.077753974241764	0.137974143701425
6	144875247	144950817	2	neutral	AA	36.3786	somatic	0	0.00476628822863248	0.00414884855518971
6	146812358	146845105	2	neutral	AA	44.6089	somatic	0	0.0348731440564117	0.124508082786973
6	149248231	149265864	2	neutral	AA	27.2874	germline	1	0.199180390501726	0.285584194919257
6	149598372	149613486	2	neutral	AA	100	somatic	0	0.141923848234936	0.206250887116168
6	153883191	153900824	2	neutral	AA	10.9139	somatic	0	0.927479727247034	0.955018432583975
6	157213309	157225904	2	neutral	AA	54.5679	somatic	0	0.0750203240057276	0.1870541334433
6	157309031	157311550	10	gain	AAAAAAABBB	20.3326	germline	1	0.0832713084959745	0.27004868809417
6	157314069	157316588	4	gain	AAAA	100	germline	1	0.0832929227696812	0.270086225325568
6	157830464	157963971	2	neutral	AA	100	somatic	0	0.993061855988085	0.886868749788468
6	162344512	162367183	2	neutral	AA	100	germline	1	0.0742443080592946	0.194510419922125
6	162415044	162440234	2	neutral	AA	21.9283	germline	1	0.100380179452381	0.299366464696212
6	165309375	165319451	1	loss	A	-1	germline	1	0.0202634594632727	0.0550321537571582
6	166732610	166745205	2	neutral	AA	54.5678	somatic	0	0.00879939820206747	0.00457270041167746
6	168322099	168339732	2	neutral	AA	18.8026	somatic	0	0.0209514976904903	0.0685654916375668
6	169448092	169463206	2	neutral	AA	54.5678	somatic	0	0.669857369018111	0.340173882888028
6	169591675	169707549	2	neutral	AA	23.608	somatic	0	2.80214992139211e-06	0.000601385348333316
6	170045095	170115627	2	neutral	AA	32.5865	somatic	0	0.000161354712364195	0.00255517984868636
7	48541130	48553725	1	loss	A	-1	somatic	0	0.000252146849431416	0.000274985793571325
7	57486099	57498694	3	gain	-	-1	somatic	0	0.000107953505487721	9.11760406933082e-05
7	62297389	62357845	3	gain	AAB	0.373947	germline	1	2.11736875435259e-09	3.4602624099378e-09
7	62400668	62405706	5	gain	-	-1	germline	1	0.014314453436684	0.0366442571979204
7	62438453	62456086	2	neutral	AA	10.3002	somatic	0	0.000272316195162016	0.000254306444551378
7	63909549	63964967	2	neutral	AA	30.312	somatic	0	0.952588792169428	0.966502397971377
7	71539600	71663031	2	neutral	AA	23.7329	somatic	0	0.0120350643946198	0.00971738609375872
7	71816690	72028286	2	neutral	AA	13.6435	somatic	0	8.87487356536704e-07	1.80051480391796e-08
7	77240097	77250173	2	neutral	AA	100	somatic	0	0.765116911303649	0.858297897023584
7	78376166	78393799	2	neutral	AA	21.8451	somatic	0	0.917568252880696	0.97170654361456
7	82487174	82522440	2	neutral	AA	36.3786	somatic	0	0.621989160940833	0.625918516508522
7	88011341	88056683	2	neutral	AA	36.3786	somatic	0	0.964086586507622	0.813085271798655
7	89532817	89613425	2	neutral	AA	56.9087	somatic	0	0.0542850356235066	0.0291784431718258
7	89683957	89694033	2	neutral	AA	100	somatic	0	0.856748134945829	0.815408949252366
7	94175334	94187929	2	neutral	AA	100	somatic	0	0.407111965050716	0.678054777138192
7	99435006	99767514	2	neutral	AA	27.2839	somatic	0	0.719114514576733	0.46571623505129
7	100948925	100956482	3	gain	AAB	5.23578	germline	1	0.00270419197904694	0.0049656999567671
7	100956482	100959001	18	gain	AAAAAAAAAAAAAAAAAB	4.69405	germline	1	0.0832682211135207	0.270043325943431
7	100959001	100976634	3	gain	AAB	0.391247	germline	1	4.63165437429777e-06	1.68796756538914e-06
7	101770119	101805385	2	neutral	AA	94.7845	somatic	0	0.000905810678321336	0.00200687586626891
7	103815547	103828142	2	neutral	AA	100	somatic	0	0.451111863978596	0.649342420387935
7	109800691	109813286	1	loss	A	-1	somatic	0	0.0001877283072525	0.00021998387138944
7	111186141	111974588	2	neutral	AA	20.7048	somatic	0	0.154447455784714	0.100775928238473
7	113506140	113594305	2	neutral	AA	41.7975	somatic	0	0.434053536469997	0.587899876858713
7	114281992	114292068	2	neutral	AA	100	somatic	0	0.259572526216155	0.564325509999434
7	118594520	118634824	2	neutral	AA	100	somatic	0	0.857061998789974	0.892569806976616
7	125947481	126121292	2	neutral	AA	33.3385	somatic	0	0.192200524406388	0.176717371859935
7	129436296	129456448	2	neutral	AA	36.3786	somatic	0	0.444523613893381	0.873362868528035
7	129625221	129675601	2	neutral	AA	25.6085	somatic	0	0.028171058297698	0.0679114279896257
7	131149216	131197077	2	neutral	AA	54.5678	somatic	0	0.000636540516487531	0.000373292630778455
7	133776533	133816837	2	neutral	AA	100	somatic	0	0.479653291505079	0.425805626493434
7	134098965	134114079	1	loss	A	-1	somatic	0	7.16167545875341e-05	4.61703260447033e-05
7	140577833	140592947	2	neutral	AA	22.3127	somatic	0	0.114514406032195	0.114088519857419
7	144487321	144502435	2	neutral	AA	48.1184	somatic	0	0.759700726603436	0.991902208715604
7	144703955	144726626	2	neutral	AA	36.3786	somatic	0	0.0705938356044152	0.0788952084466357
7	152175309	152190423	2	neutral	AA	27.3152	somatic	0	0.990507351886783	0.814244192986102
7	152402019	152407057	10	gain	AAAAAAAABB	1.71734	germline	1	0.014308021692945	0.0366342800869264
7	152407057	152409576	4	gain	AAAB	6.21349	germline	1	0.0833028050940377	0.27010338647122
7	152414614	152417133	2	neutral	AA	10.889	germline	1	0.221955051416397	0.46146234556503
7	155316502	155356806	2	neutral	AA	9.96866	germline	1	0.000502555524495898	0.00229935706992679
7	155679238	155696871	2	neutral	AA	100	somatic	0	0.392920387510268	0.681891119642787
7	155848011	155863125	2	neutral	AA	8.39506	somatic	0	0.107776722839125	0.295232427107915
7	157054612	157092397	2	neutral	AA	40.6846	somatic	0	0.521727714962185	0.0833483081203414
7	157870768	157878325	2	neutral	AA	100	somatic	0	0.0480533930595945	0.0740806277655427
7	158593721	158596240	6	gain	AAAABB	9.0818	germline	1	0.0832892171428909	0.270079790101139
7	159203319	159218433	2	neutral	AA	10.5681	somatic	0	0.0665142845170522	0.229899493795399
8	647383	649902	0	loss	-	-1	germline	1	0.0832836589531033	0.270070137474334
8	6111094	6116132	1	loss	A	-1	somatic	0	0.0143796941512345	0.0368398762868415
8	25114430	25132063	1	loss	A	-1	germline	1	1.09416882634023e-05	5.51394753756096e-06
8	28517599	28613321	2	neutral	AA	100	somatic	0	0.0435271142919858	0.112173102110175
8	39374489	39528148	1	loss	A	-1	germline	1	7.5570971097742e-35	0
8	42520720	42523239	0	loss	-	-1	somatic	0	0.0832706910120654	0.27004761565779
8	43236116	43238635	4	gain	AAAA	3.59619	germline	1	0.0833028050940377	0.27010338647122
8	43238635	43241154	6	gain	AAAABB	1.31221	germline	1	0.0832879819636379	0.270077645051201
8	43241154	43243673	3	gain	AAB	2.4176	germline	1	0.0833275150601924	0.270146292817411
8	46493183	46498221	1	loss	A	-1	somatic	0	0.0216619310048061	0.0592942318403008
8	50118024	50125581	1	loss	A	-1	somatic	0	0.00475129129383836	0.00816362729781606
8	67244705	67249743	1	loss	A	-1	somatic	0	0.0161495715661348	0.0397153280144182
8	86159876	86182547	1	loss	A	-1	somatic	0	0.0148144390417088	0.00526122829827702
8	95863064	95868102	1	loss	A	-1	somatic	0	0.0228048090624459	0.0564259984520041
8	96057027	96167863	2	neutral	AA	95.5989	somatic	0	4.06071454676497e-05	4.02786302412528e-05
8	97359350	97500414	2	neutral	AA	36.705	somatic	0	0.00886736138178181	0.0499039439693391
8	108730116	108893851	2	neutral	AA	10.9491	somatic	0	0.00508786591715855	0.00407591132493179
8	127690629	127811541	2	neutral	AA	27.2839	somatic	0	0.00704012302295109	0.000687241719385723
8	136146912	136151950	1	loss	A	-1	somatic	0	0.0143917355869914	0.0368873738279499
8	142673641	142718983	2	neutral	AA	35.3848	somatic	0	0.00194706189433616	0.0101849793200565
8	143618266	143630861	1	loss	A	-1	somatic	0	0.00020067901541834	0.00023671425504268
8	144124585	144127104	7	gain	AAAAAAB	75.5839	somatic	0	0.0832861292225801	0.27007442749961
8	145069210	145071729	3	gain	-	-1	germline	1	0.083654243377409	0.270713122840275
9	23361206	23378839	1	loss	A	-1	germline	1	2.50055592768579e-05	7.84489738514527e-06
9	40868256	40913598	4	gain	-	-1	germline	1	0.000107722182688929	9.09499726117202e-05
9	42387213	42389732	6	gain	AAAABB	15.2204	germline	1	0.0832892171428909	0.270079790101139
9	71786462	71824247	2	neutral	AA	100	somatic	0	0.120809976215499	0.0941115773206147
9	90273403	90291036	2	neutral	AA	36.3786	somatic	0	0.711018035054715	0.814280287071011
9	100568556	100669316	2	neutral	AA	11.6087	somatic	0	0.44365727737321	0.284516211004763
9	121637472	121642510	2	neutral	AA	39.9007	germline	1	0.452860473687294	0.88464557223003
9	128567241	128592431	2	neutral	AA	100	somatic	0	0.0175781052313881	0.0235136674246177
9	129423701	129443853	3	gain	AAB	0.253053	somatic	0	1.08064570942917e-06	3.61915155955295e-07
9	129998033	130078641	2	neutral	AA	67.2752	somatic	0	3.09130823599967e-07	2.13006298988017e-06
9	133897445	133902483	2	neutral	AA	100	germline	1	0.43328218732289	0.850754633936393
9	134000724	134035990	2	neutral	AA	18.6097	somatic	0	0.210103659643873	0.578208734668218
9	137325804	137328323	7	gain	AAAAABB	10.7909	germline	1	0.0832867467992232	0.270075500013698
9	137358551	137361070	0	loss	-	-1	somatic	0	0.0832676036481573	0.270042253522595
10	1178892	1196525	2	neutral	AA	27.2839	germline	1	0.0374991658780883	0.0684363577393654
10	2498848	2539152	2	neutral	AA	5.53492	somatic	0	0.281571808335432	0.298161736054522
10	3420802	3493853	2	neutral	AA	3.08372	somatic	0	0.545046398811625	0.605470952328818
10	15627876	15685813	2	neutral	AA	61.996	somatic	0	0.133474846372206	0.166634686174606
10	20502141	20524812	3	gain	AAB	18.2769	germline	1	2.04823081080724e-07	3.06720082665635e-08
10	21607982	21623096	2	neutral	AA	29.0499	somatic	0	0.123024909662504	0.389416676513944
10	22232694	22285593	2	neutral	AA	29.0711	somatic	0	0.360484003449604	0.549512289247153
10	25590521	25726547	2	neutral	AA	40.0329	somatic	0	0.93298020662916	0.84634916680784
10	26547741	26562855	2	neutral	AA	27.2936	somatic	0	0.842621257711098	0.888886910860243
10	26935667	26940705	4	gain	AAAB	59.345	germline	1	0.0143147458492602	0.0366445506783475
10	26940705	27557860	2	neutral	AA	68.0599	somatic	0	1.40569029672541e-08	2.54414376232859e-08
10	28792170	28799727	2	neutral	AA	54.5678	somatic	0	0.0820195538499679	0.0594556685964804
10	38485282	38525586	3	gain	AAB	0.569329	somatic	0	1.99892780342448e-09	4.53803344901971e-08
10	38525586	38528105	14	gain	AAAAAAAAAAAAAB	4.05506	germline	1	0.0832694560553748	0.2700454707944
10	38573447	38578485	3	gain	AAB	13.252	germline	1	0.0181581699778058	0.0484230309801671
10	38578485	38581004	5	gain	AAAAA	2.5723	germline	1	0.0832910699395926	0.270083007699364
10	39404717	39409755	4	gain	-	-1	somatic	0	0.0143173777995687	0.0366489531315378
10	39558376	39560895	0	loss	-	-1	somatic	0	0.0832663687285578	0.27004010869028
10	39560895	41843109	2	neutral	AA	1.55531	germline	1	0.0688581105358138	0.0413554348086229
10	41843109	41855704	2	neutral	AA	-1	somatic	0	NA	NA
10	41855704	41898527	25	gain	AAAAAAAAAAAAAAAAABBBBBBBB	9.84651	germline	1	9.63708701864563e-07	2.25185748936596e-07
10	41898527	42299048	2	neutral	AA	-1	somatic	0	NA	NA
10	42299048	42321719	3	gain	AAB	18.4038	somatic	0	6.79159886784477e-07	2.53661817783968e-06
10	42321719	42362023	2	neutral	AA	-1	germline	1	NA	NA
10	42362023	43082457	2	neutral	AA	4.33131	germline	1	0.000188741381742751	0.000698881268682228
10	46515854	46561196	4	gain	AABB	0.487027	germline	1	4.28480127753638e-12	2.54241072639161e-14
10	57944557	57962190	2	neutral	AA	54.5678	somatic	0	0.139334122904128	0.176689684197282
10	62211743	62289832	2	neutral	AA	54.5679	somatic	0	0.576323582922582	0.439974542570887
10	65556975	65698039	2	neutral	AA	27.3551	somatic	0	0.831502902230603	0.197074945832784
10	67725834	67728353	0	loss	-	-1	somatic	0	0.0832682211135207	0.270043325943417
10	69521881	69531957	1	loss	A	-1	somatic	0	0.00129974046201061	0.0015741430152949
10	71809133	71932564	2	neutral	AA	100	somatic	0	0.00150558049755765	0.000883828574766765
10	74111499	74146765	2	neutral	AA	25.5159	somatic	0	0.0107501488157025	0.0299062869031074
10	74741249	74768958	2	neutral	AA	54.5678	somatic	0	0.149675665529638	0.133230514178243
10	77653213	77665808	2	neutral	AA	54.5678	somatic	0	0.983576723402794	0.436479614664639
10	94255942	95203086	2	neutral	AA	6.61746	somatic	0	0.000700704430253357	3.1670887954971e-05
10	97291337	97548275	2	neutral	AA	100	somatic	0	2.39521522549733e-09	1.72035163892303e-10
10	103757610	103797914	2	neutral	AA	54.5678	somatic	0	0.0803059252385502	0.224119523843437
10	107233830	107430312	2	neutral	AA	100	somatic	0	9.49216093716139e-05	0.000847805559684667
10	118352696	118758255	2	neutral	AA	7.33947	somatic	0	5.12979272869809e-06	8.24795745280049e-05
10	120393086	120430871	2	neutral	AA	27.2839	somatic	0	0.0156488624596272	0.0078771454592852
10	123753432	123773584	2	neutral	AA	43.0438	somatic	0	0.0388448436748164	0.0556978195506191
10	127640249	127776275	2	neutral	AA	47.7052	somatic	0	0.661057705920742	0.785718978129493
10	128443810	128463962	2	neutral	AA	39.9808	somatic	0	0.0760396060668871	0.0659621874669959
10	128463962	128466481	10	gain	AAAAAAAAAB	100	germline	1	0.0832719259835927	0.270049760533645
10	130411149	130532061	2	neutral	AA	35.6521	somatic	0	4.44193755514468e-14	3.32622818177697e-13
10	130642897	130748695	2	neutral	AA	14.5271	germline	1	1.01928670678041e-06	3.91420267084053e-05
10	132426349	132451539	2	neutral	AA	8.5388	germline	1	0.655407598445156	0.414246390086112
11	3216763	3224320	1	loss	A	-1	germline	1	0.020519988949971	0.055849374550876
11	18922728	18940361	1	loss	A	-1	somatic	0	2.73856750310525e-05	7.49628799501245e-06
11	47034768	47042325	1	loss	A	-1	somatic	0	0.0166570531205836	0.0437919142921058
11	54538869	54755503	2	neutral	AA	41.7845	somatic	0	0.980409801290742	0.914969570192471
11	55599368	55685014	1	loss	A	-1	germline	1	4.09915934363247e-20	0
11	69242272	69307766	2	neutral	AA	20.5984	germline	1	0.00316537241770582	0.00579194127106963
11	70227201	70237277	1	loss	A	-1	somatic	0	0.00102222189639213	0.00157430986105878
11	107727554	107740149	2	neutral	AA	100	somatic	0	0.659875297915592	0.987529976314382
11	108581495	108604166	2	neutral	AA	46.1437	germline	1	0.0160133284991338	0.0438057143607161
11	115546530	115896671	2	neutral	AA	34.7062	somatic	0	0.000285928882780264	0.00377094112138976
11	131678206	131680725	4	gain	AABB	9.88486	somatic	0	0.0833021874209415	0.2701023138763
12	2254505	2257024	7	gain	AAAAABB	21.3068	germline	1	0.0832861292225801	0.27007442749961
12	4579542	4592137	2	neutral	AA	100	somatic	0	0.893285971834843	0.569488896936172
12	7158998	7169074	2	neutral	AA	100	somatic	0	0.475638044938366	0.507839817709282
12	7844166	7970116	1	loss	A	-1	germline	1	8.01894585809699e-27	0
12	11383361	11390918	1	loss	A	-1	somatic	0	0.0065443555549567	0.00917363897894219
12	19046159	19325768	2	neutral	AA	13.9008	somatic	0	0.00113575711878356	0.000612059166169021
12	33147521	33155078	1	loss	A	-1	somatic	0	0.00577687833178288	0.00937567380815763
12	37356770	37361808	3	gain	-	-1	somatic	0	0.0143286902951388	0.036668035776526
12	37616227	37623784	1	loss	A	-1	somatic	0	0.00358996091885258	0.00657822542866915
12	37679202	37742177	2	neutral	AA	10.0646	somatic	0	0.241124171731578	0.275120216510058
12	41623956	41868299	2	neutral	AA	100	somatic	0	0.0363010664264312	0.040124535697409
12	43855790	43906170	2	neutral	AA	54.5678	somatic	0	0.0270645807213337	0.0205669003942326
12	51873767	51956894	2	neutral	AA	15.5913	somatic	0	0.183676828454125	0.197634429169808
12	59534046	59544122	2	neutral	AA	2.69676	somatic	0	0.68008318751677	0.884418716696502
12	60370354	60400582	2	neutral	AA	27.2839	somatic	0	0.131724859901279	0.268620810076061
12	79716274	79771692	2	neutral	AA	27.8769	somatic	0	0.866831181785453	0.695460710555707
12	82638314	82640833	1	loss	A	-1	somatic	0	0.0832990991111091	0.270096950948318
12	88701547	88704066	1	loss	A	-1	somatic	0	0.0832984814602723	0.270095878372051
12	90288517	90313707	2	neutral	AA	36.3798	somatic	0	0.225730275557086	0.368299021850056
12	91953576	91958614	2	neutral	AA	100	somatic	0	0.381550920277257	0.551891308934004
12	123559469	123776103	2	neutral	AA	60.9151	somatic	0	3.12729605972155e-11	1.42697855753937e-08
12	124438600	124441119	3	gain	AAB	5.60877	somatic	0	0.0833040404513599	0.270105531670388
12	124881944	124902096	2	neutral	AA	21.9359	somatic	0	0.149266329689394	0.467965879730958
12	128083593	128086112	0	loss	-	-1	somatic	0	0.0832818062899452	0.27006691998803
12	128826698	128849369	2	neutral	AA	36.3786	somatic	0	0.316899756395324	0.301384019905924
12	131917511	131945220	2	neutral	AA	26.8915	somatic	0	0.145077665698716	0.330589761005078
12	132844503	132882288	2	neutral	AA	14.9781	germline	1	0.036499779194394	0.0456993134835852
13	22018579	22023617	0	loss	-	-1	germline	1	0.0144396956413245	0.0370334461172397
13	63027899	63063165	3	gain	-	-1	germline	1	3.26244017134598e-08	1.36900180081057e-09
13	63063165	63068203	5	gain	-	-1	germline	1	0.0143145509069573	0.0366445506783475
13	82590453	82598010	1	loss	A	-1	somatic	0	0.00518173297368948	0.00952465200974684
13	87210299	87230451	2	neutral	AA	8.92806	somatic	0	0.679981321876489	0.333468871052013
13	89147410	89190233	1	loss	A	-1	germline	1	4.49964948466081e-11	5.31907851097912e-13
13	89875401	89877920	2	neutral	AA	100	somatic	0	0.415041535635989	0.652039748492547
13	90210428	90212947	0	loss	-	-1	somatic	0	0.0832774835390724	0.2700594126288
13	91527865	91545498	2	neutral	AA	100	somatic	0	0.846549752106576	0.938360004891046
13	92777289	92784846	2	neutral	AA	54.5678	somatic	0	0.651125970765292	0.683384676938928
13	93590926	93593445	2	neutral	AA	100	somatic	0	0.174588495075063	0.404008349692975
13	94517918	94543108	2	neutral	AA	30.9816	somatic	0	0.323526307824677	0.384032589019218
13	96064584	96074660	2	neutral	AA	36.4579	somatic	0	0.18820321303576	0.282803347128779
13	96109926	96112445	2	neutral	AA	100	somatic	0	0.474128745370771	0.700212662855918
13	96397092	96460067	2	neutral	AA	100	somatic	0	0.132459399690664	0.0483591573389974
13	97306451	97314008	2	neutral	AA	54.5678	somatic	0	0.272191479584216	0.469845784985382
13	97530642	97575984	2	neutral	AA	21.9786	somatic	0	0.00785422809510762	0.0402538176627463
13	98538242	98540761	2	neutral	AA	100	somatic	0	0.567411623627558	0.768331100060782
13	98601217	98606255	1	loss	A	-1	germline	1	0.0204676439923349	0.055683750114328
13	99631488	99639045	2	neutral	AA	100	somatic	0	0.441424814208029	0.620945875845102
13	100218415	100238567	2	neutral	AA	100	somatic	0	0.706963825973999	0.729541386394975
13	100238567	100407340	2	neutral	AA	64.3617	somatic	0	0.0300035190223816	0.0618842157380907
13	103679521	103689597	2	neutral	AA	54.5678	somatic	0	0.994916010538804	0.597072189051891
13	105138022	105140541	2	neutral	AA	100	somatic	0	0.483826086873931	0.707712758220764
13	107306881	107311919	2	neutral	AA	54.5682	somatic	0	0.281840674373968	0.270963795481099
13	109216283	109218802	1	loss	A	-1	somatic	0	0.0833003344239125	0.270099096110178
13	110354871	110465707	2	neutral	AA	8.345	somatic	0	2.37523470901544e-06	1.95984761098833e-05
13	110788139	110798215	2	neutral	AA	36.453	somatic	0	0.159158115682182	0.285928940584356
13	113176151	113317215	2	neutral	AA	9.40844	somatic	0	0.0268436651005458	0.119976118453903
13	113470874	113561558	2	neutral	AA	6.72593	somatic	0	0.00184501461376133	0.0208720410540209
14	18680904	18693499	3	gain	AAB	7.08012	germline	1	0.000108234191169965	9.12746564577516e-05
14	31104612	31124764	2	neutral	AA	36.3786	somatic	0	0.019876675662212	0.0742285452884289
14	34714339	34953644	2	neutral	AA	88.2213	somatic	0	2.62082314404484e-21	0
14	35381874	35384393	2	neutral	AA	100	somatic	0	0.88838913529988	0.932025749065496
14	35555685	35694230	2	neutral	AA	25.1659	somatic	0	0.445862623256686	0.299594997980452
14	35946130	35948649	4	gain	AAAA	5.62159	somatic	0	0.0833028050940377	0.27010338647122
14	43097571	43135356	2	neutral	AA	54.5678	somatic	0	0.296105644452779	0.251242152094471
14	44964150	44974226	2	neutral	AA	36.3787	somatic	0	0.254302489586662	0.234642598161457
14	46442803	46455398	2	neutral	AA	100	somatic	0	0.164533289978705	0.37918239199775
14	54511160	54533831	2	neutral	AA	36.384	somatic	0	0.361241771584524	0.649772070037415
14	60924534	60944686	2	neutral	AA	100	somatic	0	0.0736786396860994	0.11005484784746
14	61841450	61889311	2	neutral	AA	27.3746	somatic	0	0.00327109400895112	0.0116377431141533
14	63871764	63914587	2	neutral	AA	100	somatic	0	0.310297093551828	0.153152719250461
14	64380602	64408311	2	neutral	AA	48.0896	somatic	0	0.000504630115377634	0.000178272126567736
14	67050742	67227072	2	neutral	AA	77.0357	somatic	0	0.541381445820431	0.763917723535165
14	67894607	67990329	2	neutral	AA	48.2057	somatic	0	0.497973796229986	0.446597247576761
14	73791586	73955321	2	neutral	AA	29.1017	somatic	0	2.76037970314898e-12	1.47773127068263e-10
14	77008349	77038577	2	neutral	AA	100	somatic	0	0.0204580584396748	0.0271103550915459
14	77600314	77872366	2	neutral	AA	100	somatic	0	4.42745212389047e-11	7.16232739783607e-10
14	80023592	80028630	2	neutral	AA	100	germline	1	0.198806411526261	0.465604556162467
14	84482222	84535121	2	neutral	AA	16.1631	germline	1	0.622283331525741	0.591485127586103
14	84812211	84837401	2	neutral	AA	36.384	somatic	0	0.410219731335724	0.529121005120313
14	88205304	88220418	2	neutral	AA	100	somatic	0	0.547368257501144	0.840129493639194
14	90144934	90200352	2	neutral	AA	36.3786	somatic	0	0.963340866744136	0.950841659811042
14	92754618	92835226	2	neutral	AA	27.2839	somatic	0	0.0290560593242652	0.0877034963265582
14	94699286	94789970	2	neutral	AA	21.9466	somatic	0	0.841258924317311	0.76545861632755
14	99215853	99230967	2	neutral	AA	47.4045	germline	1	0.0444025651179909	0.300364232988714
14	103349532	103425102	2	neutral	AA	36.0806	somatic	0	1.22815920895022e-06	9.88123917944339e-06
15	22227656	22252846	5	gain	AAABB	2.348	germline	1	2.21278902126375e-05	1.23026053882036e-05
15	23371282	23424181	1	loss	A	-1	germline	1	1.08132306354108e-08	8.12634071145624e-10
15	34434730	34520376	1	loss	A	-1	germline	1	3.87727848172779e-20	0
15	38966411	38976487	2	neutral	AA	100	germline	1	0.377182462860221	0.478882093264624
15	40966497	41074814	2	neutral	AA	14.0808	somatic	0	0.000105990512314189	7.18735341003196e-05
15	53526231	53564016	2	neutral	AA	54.5699	somatic	0	0.00475536921335893	0.0175609481092465
15	56750551	56783298	2	neutral	AA	25.844	somatic	0	0.868299883219808	0.434986239318835
15	59627249	59675110	2	neutral	AA	20.454	somatic	0	0.0037942149986514	0.00810934072999248
15	72093780	72096299	0	loss	-	-1	somatic	0	0.0832737784687027	0.270052977870707
15	76592714	76602790	1	loss	A	-1	somatic	0	0.00144566085443386	0.00144136934467709
15	77534820	77565048	2	neutral	AA	100	somatic	0	0.44057438838533	0.321582552081613
15	97769947	97805213	2	neutral	AA	100	germline	1	0.0360753774180479	0.0408459177822269
15	100185668	100200782	2	neutral	AA	100	somatic	0	0.186902560684477	0.108446342340211
16	846384	848903	4	gain	AAAA	12.1843	somatic	0	0.0832941580082887	0.27008837042525
16	881650	886688	2	neutral	AA	21.8271	somatic	0	0.0156808499077897	0.0395678992745973
16	1025233	1027752	5	gain	AAABB	8.55379	germline	1	0.0832910699395926	0.270083007699364
16	3327599	3471182	2	neutral	AA	11.2498	somatic	0	0.000190151802963454	0.00336742939431611
16	4642517	4650074	2	neutral	AA	15.5908	somatic	0	0.762994277362996	0.849718624138813
16	6400779	6594742	2	neutral	AA	12.7939	somatic	0	0.241964234134958	0.33128377860065
16	6713135	6725730	2	neutral	AA	36.8129	somatic	0	0.882155877844671	0.982691414692891
16	11922427	11975326	2	neutral	AA	18.1978	somatic	0	0.000392978207421725	0.000313707625670512
16	19310654	19355996	2	neutral	AA	19.5343	somatic	0	0.0644466540100207	0.287126360680342
16	19935366	19955518	1	loss	A	-1	germline	1	2.92807493796111e-06	9.01017948362615e-07
16	21557602	21582792	4	gain	AABB	1.8539	germline	1	4.33714395625457e-08	4.13536904719791e-09
16	22615582	22698709	4	gain	AABB	1.18826	germline	1	1.16336625357242e-22	0
16	25328545	25333583	1	loss	A	-1	somatic	0	0.0198781576481073	0.053829725117866
16	34049323	34051842	2	neutral	AA	54.8533	somatic	0	0.179037751904701	0.409658768299886
16	34061918	34064437	27	gain	AAAAAAAAAAAAAAAAAABBBBBBBBB	100	germline	1	0.0832676036481573	0.27004225352261
16	34069475	34071994	4	gain	AAAA	100	germline	1	0.083304658135586	0.270106604274635
16	34074513	34084589	2	neutral	AA	57.6427	somatic	0	0.0527634628522143	0.0447214777039157
16	34084589	34087108	15	gain	AAAAAAAAAABBBBB	35.6223	germline	1	0.0832682211135207	0.270043325943431
16	34094665	34099703	8	gain	AAAAABBB	2.80174	germline	1	0.0143109448967349	0.0366424963585439
16	34099703	34210539	2	neutral	AA	3.00777	somatic	0	2.98723037644347e-06	0.000158772828048437
16	34210539	34213058	4	gain	AAAB	3.89933	somatic	0	0.0832929227696812	0.270086225325568
16	34213058	34218096	2	neutral	AA	-1	somatic	0	NA	NA
16	34255881	34595946	2	neutral	AA	-1	somatic	0	NA	NA
16	34595946	34598465	3	gain	-	-1	somatic	0	0.083304658135586	0.270106604274635
16	34598465	34958682	2	neutral	AA	1.41808	somatic	0	7.03524335340213e-07	4.81361323007024e-05
16	35233253	35522938	3	gain	AAB	2.69085	somatic	0	9.50580324969015e-72	0
16	35988953	36089713	2	neutral	AA	4.55535	germline	1	0.0028770326853707	0.0079781675174696
16	36122460	36127498	4	gain	-	-1	germline	1	0.0143150382671057	0.036645137645371
16	49120500	49133095	2	neutral	AA	54.5678	somatic	0	0.00361257855470642	0.00445794896772744
16	54309640	54337349	2	neutral	AA	21.9172	somatic	0	0.984004746997616	0.726638563439802
16	55168619	55191290	2	neutral	AA	36.3853	somatic	0	0.0106066707514994	0.0155841428513869
16	58030203	58052874	2	neutral	AA	54.5678	somatic	0	0.408411040046626	0.884315233032219
16	62529137	62604707	2	neutral	AA	53.5855	somatic	0	0.329228659746392	0.268463648733869
16	65320189	65325227	1	loss	A	-1	somatic	0	0.0288570369257844	0.0564434997556559
16	65798799	65834065	2	neutral	AA	21.2528	somatic	0	0.00219385657738924	0.0256982130281002
16	69816604	69824161	3	gain	AAB	21.5066	somatic	0	0.00276540961743425	0.00516523275910863
16	70149112	70161707	3	gain	AAB	3.17404	somatic	0	0.000107956941102642	9.1108529077788e-05
16	71884703	71892260	2	neutral	AA	100	somatic	0	0.0133295114885267	0.0160684738668689
16	73494344	73542205	2	neutral	AA	36.3786	somatic	0	0.325012578184116	0.137243499273
16	74108980	74111499	0	loss	-	-1	somatic	0	0.0832688385825932	0.270044398367347
16	77119185	77126742	2	neutral	AA	54.7239	somatic	0	0.519013936748698	0.874346624845328
16	78723788	78754016	2	neutral	AA	74.2214	somatic	0	0.168807962804382	0.461065748415074
16	85900419	85915533	2	neutral	AA	54.5678	somatic	0	0.124233712784496	0.0906319848864706
16	89066802	89076878	2	neutral	AA	12.1317	somatic	0	0.110360691206259	0.346783802035658
16	89210385	89238094	2	neutral	AA	100	somatic	0	0.42736314653935	0.885229989268422
16	89396791	89416943	2	neutral	AA	51.9503	somatic	0	0.236544130197259	0.190405534020347
16	89847692	89935857	2	neutral	AA	4.98491	somatic	0	0.0974790991265585	0.146481950889155
17	2309923	2335113	2	neutral	AA	36.3786	somatic	0	0.00544344582353165	0.0135922053406831
17	6579628	6594742	2	neutral	AA	27.2839	somatic	0	0.653854704233609	0.756872762983384
17	10844295	10897194	2	neutral	AA	73.8525	somatic	0	0.443138937296798	0.592484375273991
17	16156866	16222360	2	neutral	AA	36.4128	somatic	0	6.18579924428472e-05	0.000104161392091351
17	21290588	21303183	4	gain	AABB	0.198382	germline	1	0.00010769201484715	9.09099194178475e-05
17	21675995	21859882	4	gain	-	-1	germline	1	4.33872947844096e-08	4.15029888234386e-09
17	21859882	21885072	3	gain	-	-1	somatic	0	5.02815465461166e-07	1.62326536812252e-06
17	21885072	21968199	0	loss	-	-1	germline	1	7.57988363339808e-23	0
17	21968199	21978275	24	gain	-	-1	germline	1	0.0143069499835359	0.0366328130651997
17	22129415	22154605	7	gain	AAAAABB	0.263223	germline	1	2.03879512200784e-07	3.05110506859663e-08
17	22157124	22159643	4	gain	AABB	2.83971	germline	1	0.0832929227696812	0.270086225325568
17	22159643	26716514	2	neutral	AA	12.7556	somatic	0	0.0110280672200713	0.00863397416344447
17	26716514	26782008	2	neutral	AA	-1	somatic	0	NA	NA
17	26782008	26822312	3	gain	-	-1	germline	1	5.32647710998961e-09	1.24050222316541e-08
17	26822312	26827350	4	gain	-	-1	germline	1	0.0143152332152633	0.0366460181113302
17	26827350	26865135	3	gain	-	-1	germline	1	1.01717615232576e-09	1.18141966209961e-08
17	26865135	26867654	5	gain	-	-1	germline	1	0.0832923051559419	0.270085152780391
17	26877730	26880249	5	gain	-	-1	germline	1	0.0832892171428909	0.270079790101139
17	26880249	26938186	2	neutral	AA	-1	somatic	0	NA	NA
17	26938186	26940705	20	gain	AAAAAAAAAAAAABBBBBBB	100	germline	1	0.0832676036481573	0.27004225352261
17	26940705	27016275	2	neutral	AA	-1	somatic	0	NA	NA
17	27016275	27348783	2	neutral	AA	67.12	somatic	0	0.0421575012182469	0.0359019932221036
17	30726762	30817446	2	neutral	AA	18.2299	germline	1	4.13066782848596e-05	0.000136153938141592
17	31872907	31893059	2	neutral	AA	54.5679	somatic	0	0.000152587675665568	4.67709906003533e-05
17	35492710	35631255	2	neutral	AA	100	somatic	0	1.97144456402209e-05	0.000160267841153749
17	47329491	47334529	2	neutral	AA	100	somatic	0	0.27133055112244	0.485024827747151
17	48772878	48845929	2	neutral	AA	47.0601	somatic	0	8.51528921740668e-06	5.18061590626395e-06
17	49248969	49322020	2	neutral	AA	17.1831	somatic	0	9.50587867644243e-09	6.98440837387793e-08
17	56083016	56095611	1	loss	A	-1	somatic	0	0.000313665232809898	0.000229746017601395
17	56478499	56483537	2	neutral	AA	54.5678	somatic	0	0.451317044959289	0.607611826486659
17	66796323	66798842	8	gain	AAAAAAAA	28.0131	germline	1	0.0832824238406218	0.27006799248037
17	69146550	69161664	2	neutral	AA	54.5678	somatic	0	0.548893550471429	0.757473325454266
17	74600185	74640489	2	neutral	AA	36.3786	somatic	0	0.299405668990596	0.642582039510653
17	75068719	75466721	2	neutral	AA	8.89684	somatic	0	1.64060502955686e-31	0
17	80021073	80129390	2	neutral	AA	12.1623	somatic	0	0.830217620178929	0.954821474807099
17	80396404	80436708	2	neutral	AA	16.7822	somatic	0	0.0418207939364906	0.157053698466446
17	81799487	81817120	2	neutral	AA	21.8271	germline	1	0.88187077167513	0.530737621704568
18	12060972	12091200	2	neutral	AA	1.45573	somatic	0	0.0522995885779151	0.234633320192396
18	31983743	31998857	2	neutral	AA	36.48	somatic	0	0.107405741246755	0.160928673961773
18	38271167	38447497	2	neutral	AA	13.6543	somatic	0	0.0103501992745531	0.00203886840658052
18	39160374	39165412	2	neutral	AA	54.5678	somatic	0	0.286697382804654	0.453030946743437
18	40820395	40838028	2	neutral	AA	38.1315	somatic	0	0.0487693738120895	0.123655201227202
18	41283891	41288929	0	loss	-	-1	germline	1	0.0143121143257543	0.0366445506783436
18	42472859	42477897	1	loss	A	-1	somatic	0	0.022703373905002	0.0573119892616085
18	53425471	53430509	1	loss	A	-1	somatic	0	0.0293547015980676	0.0564913319809899
18	54637110	54657262	2	neutral	AA	27.3836	somatic	0	0.406207675291351	0.581894306533978
18	54823516	54843668	2	neutral	AA	46.8867	somatic	0	0.29476773878473	0.337465758711061
18	58264470	58269508	1	loss	A	-1	somatic	0	0.0251871425122686	0.0533605799619958
18	58775827	58785903	2	neutral	AA	54.5678	somatic	0	0.568267830253394	0.810055019683086
18	59473590	59491223	2	neutral	AA	35.2889	somatic	0	0.356112622755369	0.800963904963895
18	65531785	65539342	4	gain	AAAB	100	germline	1	0.00270460082264809	0.00496707208220448
18	66647702	66677930	2	neutral	AA	36.3786	germline	1	0.966612834051592	0.731333460619088
18	71703335	71713411	2	neutral	AA	100	somatic	0	0.538334642894283	0.725129442881415
18	74265158	74363399	2	neutral	AA	100	somatic	0	0.0366539724746994	0.0675032076442975
18	74615299	74617818	3	gain	AAB	100	somatic	0	0.0833176303613617	0.270129129682005
18	76955450	76968045	2	neutral	AA	8.19561	somatic	0	0.000316924496199761	0.00178491458108943
18	78706155	78741421	2	neutral	AA	25.3971	somatic	0	0.000925539091617037	0.000722387520353585
18	79199879	79202398	4	gain	AAAB	47.1476	somatic	0	0.0832984814602723	0.270095878372066
19	455939	481129	2	neutral	AA	3.90376	germline	1	0.418037352780041	0.218214678070462
19	4509010	4551833	2	neutral	AA	9.82024	somatic	0	0.00221113654460713	0.000444601738645023
19	4881822	4944797	2	neutral	AA	59.1399	somatic	0	1.12741817778008e-07	9.90144624846145e-07
19	7448683	7451202	9	gain	AAAAAABBB	6.01128	germline	1	0.0832725434749201	0.270050832976228
19	8919779	8922298	1	loss	A	-1	somatic	0	0.123035973363153	0.33344737879528
19	14935151	14940189	1	loss	A	-1	somatic	0	0.0178539649063558	0.0474938516452816
19	15171937	15335672	2	neutral	AA	10.933	somatic	0	0.00253240274156078	0.00528683742611824
19	17330720	17338277	3	gain	AAB	22.7611	somatic	0	0.00297017583021131	0.00582871366722937
19	19950480	20043683	2	neutral	AA	36.3786	somatic	0	0.0572709294618941	0.0777913634374148
19	21557602	21587830	2	neutral	AA	0.330611	germline	1	0.0291769705679892	0.0989758632352929
19	21822097	21854844	2	neutral	AA	100	somatic	0	0.00698615375058898	0.025441353173872
19	22958166	22960685	0	loss	-	-1	somatic	0	0.0832805711997203	0.270064775012705
19	24331021	24388958	4	gain	AABB	0.230245	germline	1	9.92513735205722e-17	0
19	27338707	27341226	5	gain	AAABB	3.84256	germline	1	0.0832923051559419	0.270085152780391
19	27346264	27379011	6	gain	AAAABB	0.50042	germline	1	1.97946869534056e-09	7.56770202059442e-11
19	27379011	27384049	4	gain	AAAB	2.31438	germline	1	0.0143178652446157	0.0366536495916605
19	27384049	27389087	6	gain	AAAABB	0.851774	germline	1	0.0143135762305693	0.0366427898266323
19	27389087	27391606	3	gain	AAB	5.63678	germline	1	0.0833040404513599	0.270105531670388
19	27391606	27399163	6	gain	AAAABB	0.437916	germline	1	0.00270197099025715	0.00496009575073875
19	27469695	27472214	0	loss	-	-1	somatic	0	0.0832805711997203	0.270064775012705
19	29510085	29515123	1	loss	A	-1	somatic	0	0.0207360685765451	0.0564571625518336
19	33757119	33893145	2	neutral	AA	14.0907	somatic	0	0.0215163572381385	0.0116781744500647
19	34391907	34394426	4	gain	AAAA	8.47076	somatic	0	0.0833021874209415	0.2701023138763
19	34394426	34412059	2	neutral	AA	18.4206	somatic	0	0.011936250029895	0.0150552566868181
19	36349170	36356727	1	loss	A	-1	somatic	0	0.00527830486720508	0.0088713997987383
19	40001720	40077290	2	neutral	AA	36.3786	somatic	0	0.0510115432812045	0.0300218909176323
19	47480631	47531011	2	neutral	AA	100	somatic	0	0.0776957319545206	0.356679558793099
19	48956765	49002107	2	neutral	AA	36.3786	somatic	0	0.000556582141175004	0.00586188264087273
19	49594072	49626819	2	neutral	AA	27.2878	somatic	0	0.0258291160835213	0.1281741702496
19	51780564	51795678	2	neutral	AA	40.9147	somatic	0	0.257839411815904	0.231938272212147
19	58335002	58350116	2	neutral	AA	21.8271	somatic	0	0.259317907622817	0.318498711561297
20	60456	62975	9	gain	-	-1	germline	1	0.0832725434749201	0.270050832976228
20	65494	68013	4	gain	-	-1	germline	1	0.0832984814602723	0.270095878372066
20	216634	249381	2	neutral	AA	21.0296	somatic	0	0.00849586874390897	0.0015531141497277
20	1576894	1602084	1	loss	A	-1	germline	1	1.18483280545882e-06	2.04191598296433e-07
20	3896893	3904450	1	loss	A	-1	somatic	0	0.00425608403908978	0.00946132565412683
20	4123603	4161388	2	neutral	AA	100	somatic	0	0.037581747659345	0.107002574679408
20	4161388	4370465	2	neutral	AA	10.0002	somatic	0	0.0851844398113631	0.13013147998506
20	5010291	5017848	2	neutral	AA	18.1951	somatic	0	0.0195750704277286	0.0293543436253607
20	6698021	6750920	2	neutral	AA	15.695	somatic	0	0.00113705424419156	0.000535400492844507
20	21255322	21325854	2	neutral	AA	27.2839	somatic	0	0.218030850158306	0.306442944869146
20	22081554	22084073	1	loss	A	-1	somatic	0	0.0833207192277104	0.270134493076307
20	23431738	23585397	3	gain	AAB	0.436537	germline	1	2.11305417015985e-38	0
20	23585397	23587916	3	gain	AAB	9.49003	germline	1	0.0833126883681384	0.270120548412768
20	23686157	23703790	2	neutral	AA	15.5908	somatic	0	0.0656582155995312	0.256362888495798
20	26207676	26308436	2	neutral	AA	2.15979	somatic	0	0.411368614339058	0.549139862225594
20	26308436	26315993	2	neutral	AA	-1	somatic	0	NA	NA
20	26315993	26323550	1	loss	A	-1	somatic	0	0.0185943890186328	0.0495347410101356
20	26323550	26381487	2	neutral	AA	3.86043	somatic	0	0.102210766483726	0.159248838294535
20	28782094	28787132	9	gain	-	-1	germline	1	0.0143092883499114	0.0366380945839802
20	28802246	28804765	4	gain	-	-1	germline	1	0.0833015697515553	0.270101241284488
20	28804765	28832474	9	gain	-	-1	germline	1	9.64460645613448e-07	2.25402277509446e-07
20	28870259	28872778	9	gain	-	-1	germline	1	0.0832725434749201	0.270050832976228
20	29263223	29265742	16	gain	-	-1	germline	1	0.0832682211135207	0.270043325943431
20	29265742	29270780	4	gain	-	-1	germline	1	0.0143181577186705	0.0366498336777045
20	29275818	29280856	4	gain	-	-1	germline	1	0.0143184501979954	0.0366507142423813
20	29283375	29376578	3	gain	-	-1	germline	1	1.98632655222065e-09	7.61878338195743e-11
20	29409325	29411844	5	gain	-	-1	germline	1	0.0832898347380818	0.270080862630771
20	29885416	29892973	8	gain	-	-1	germline	1	0.0143105551057932	0.0366419094285363
20	30938358	30943396	5	gain	-	-1	germline	1	0.0143142584978937	0.0366436702432358
20	31066827	31074384	42	gain	-	-1	germline	1	0.0143066577114416	0.0366325196670224
20	31165068	31167587	6	gain	-	-1	germline	1	0.0832892171428909	0.270079790101139
20	31182701	31187739	18	gain	-	-1	germline	1	0.0143097755520057	0.0366413225067542
20	31187739	31190258	5	gain	-	-1	germline	1	0.0832923051559419	0.270085152780391
20	31190258	31240638	3	gain	AAB	2.31616	germline	1	6.96064474955285e-06	7.77243250649207e-06
20	31240638	31243157	65	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	51.4566	germline	1	0.0832663687285578	0.270040108690294
20	31243157	31245676	3	gain	AAA	8.04117	germline	1	0.0833336934793269	0.270157020181215
20	33895664	33900702	2	neutral	AA	100	somatic	0	0.834718059902728	0.737819042732634
20	35394469	35439811	2	neutral	AA	54.5678	somatic	0	0.000105773066831712	0.000278227718028878
20	36074599	36140093	2	neutral	AA	54.5802	somatic	0	0.369952440724893	0.366688654376822
20	36888236	36938616	2	neutral	AA	27.3062	somatic	0	0.000206715519263491	0.000404477572784168
20	38462611	38465130	1	loss	A	-1	somatic	0	0.0834554840140713	0.270368412642751
20	43641675	43646713	1	loss	A	-1	somatic	0	0.0163642397575654	0.0428814978107193
20	44616528	44634161	2	neutral	AA	100	somatic	0	0.617768319642358	0.474677657449341
20	45525887	45535963	2	neutral	AA	27.5279	somatic	0	0.973499323786356	0.82713740130666
20	47158199	47160718	2	neutral	AA	100	somatic	0	0.228273402512991	0.468681791038019
20	47160718	47180870	2	neutral	AA	36.3793	somatic	0	0.0204600541429967	0.0556414987454039
20	52208794	52218870	2	neutral	AA	100	germline	1	0.485299515791299	0.602995532753549
20	53390205	53422952	2	neutral	AA	14.2151	somatic	0	0.407552654229712	0.172219280836927
20	53959499	53964537	2	neutral	AA	100	somatic	0	0.104073910593481	0.134932971483131
20	53964537	54047664	2	neutral	AA	54.5678	somatic	0	0.00478534737742358	0.0015377808524667
20	54876415	54911681	2	neutral	AA	54.5697	somatic	0	0.165090326819762	0.132557487322842
20	55082973	55355025	2	neutral	AA	100	somatic	0	0.711658493922632	0.591327909679844
20	58226685	58254394	2	neutral	AA	54.5678	germline	1	0.0852108218601196	0.152863614971926
20	59947162	60030289	2	neutral	AA	26.3377	somatic	0	0.0116450435880111	0.0192689726024515
20	61327574	61332612	3	gain	AAA	100	somatic	0	0.0143252762118863	0.0366612824624214
20	63692915	63695434	3	gain	AAA	100	somatic	0	0.0833077466123662	0.270111967342507
20	64088398	64090917	4	gain	AAAA	12.6153	somatic	0	0.0832997167656559	0.270098023527708
21	0	10652851	6	gain	AAAABB	-1	germline	1	9.153116534004e-11	1.38833389229376e-12
21	10652851	10680560	6	gain	AAAABB	2.09448	germline	1	9.24003530877586e-09	5.59111423825698e-10
21	10680560	10683079	6	gain	AAAABB	-1	germline	1	NA	NA
21	10683079	10690636	5	gain	AAAAB	9.67477	germline	1	0.00270213084574786	0.00496021492877485
21	10690636	10693155	59	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBB	100	germline	1	0.0832663687285578	0.270040108690294
21	10693155	10700712	5	gain	AAAAA	5.24466	germline	1	0.00270214860800249	0.00496021492877485
21	10700712	10756130	6	gain	AAAABB	0.593474	germline	1	4.27837427759545e-12	2.54241072639161e-14
21	15711003	15892371	2	neutral	AA	37.092	somatic	0	0.00772506233938359	0.0223500947951558
21	16159385	16177018	2	neutral	AA	100	somatic	0	0.0660520042992905	0.101212350427559
21	20867396	20897624	2	neutral	AA	37.106	somatic	0	0.484419782894768	0.391247227253888
21	21159600	21179752	2	neutral	AA	100	somatic	0	0.692655386802905	0.799913011183403
21	28278294	28311041	2	neutral	AA	36.5166	somatic	0	0.181366362322752	0.308715856470564
21	28754385	28789651	2	neutral	AA	36.3786	somatic	0	0.055279084742487	0.188725932393221
21	30154949	30195253	2	neutral	AA	39.3303	somatic	0	0.359395921940888	0.908190282466381
21	31784742	31787261	3	gain	AAB	100	somatic	0	0.083305893515168	0.270108749492457
21	33069432	33082027	2	neutral	AA	36.3787	somatic	0	0.620401735422796	0.739600955234352
21	33165154	33220572	2	neutral	AA	9.36386	somatic	0	0.903007595339966	0.966448059261293
21	35112341	35127455	2	neutral	AA	54.5679	germline	1	0.943924423560577	0.663799887438765
21	38961373	38986563	2	neutral	AA	54.5679	somatic	0	0.279643389386877	0.436053971890176
21	39457616	39460135	2	neutral	AA	100	somatic	0	0.512341843194715	0.729243196446815
21	40147822	40276291	2	neutral	AA	100	somatic	0	1.17428001023208e-06	1.82145575711168e-05
21	41805324	41807843	4	gain	AAAA	6.9498	somatic	0	0.0833028050940377	0.27010338647122
21	43583738	43631599	2	neutral	AA	17.3817	somatic	0	0.247397883262655	0.410735338915249
21	44739959	44750035	2	neutral	AA	54.5678	somatic	0	0.985569187743278	0.931122275722738
21	45241240	45256354	2	neutral	AA	36.3839	somatic	0	0.312342766282945	0.426208532238871
21	46082586	46092662	2	neutral	AA	24.7437	somatic	0	0.0154343997464676	0.053307730546394
22	11212069	11214588	5	gain	-	-1	somatic	0	0.0832910699395926	0.270083007699364
22	16557387	16567463	2	neutral	AA	13.2814	germline	1	0.00758024364361529	0.0573074330143398
22	17751393	17756431	2	neutral	AA	21.8271	somatic	0	0.3893535268177	0.490121902583235
22	17874824	17877343	3	gain	AAA	10.1908	somatic	0	0.0833077466123662	0.270111967342507
22	18731284	18733803	9	gain	AAAAAABBB	100	somatic	0	0.0832725434749201	0.270050832976228
22	21068916	21104182	2	neutral	AA	39.5007	somatic	0	0.206667932689978	0.194318415823763
22	23570283	23582878	2	neutral	AA	36.3786	somatic	0	0.84828964824721	0.741126074224172
22	25069088	25119468	2	neutral	AA	22.0201	somatic	0	0.870316313018655	0.872120341693314
22	29119640	29122159	4	gain	AAAA	12.2692	somatic	0	0.0833040404513599	0.270105531670388
22	31379183	31384221	1	loss	A	-1	somatic	0	0.0205539686435621	0.0547558045939488
22	34467477	34469996	1	loss	A	-1	somatic	0	0.083380043451655	0.270237485319994
22	35248367	35250886	1	loss	A	-1	somatic	0	0.115690952788055	0.322465980560365
22	36391993	36442373	2	neutral	AA	17.643	somatic	0	0.000660054489869364	0.000129885231831772
22	36749691	36752210	0	loss	-	-1	germline	1	0.0832713084959745	0.270048688094156
22	37392036	37480201	2	neutral	AA	54.5678	somatic	0	0.179499204862034	0.188281705823418
22	37480201	37512948	2	neutral	AA	57.2683	somatic	0	0.0249762755599173	0.120321126630973
22	37800114	37895836	2	neutral	AA	94.5988	somatic	0	0.000182675897800227	0.00106212056984512
22	39749820	39769972	2	neutral	AA	70.8527	somatic	0	0.754880024414654	0.442287289125048
22	41097485	41125194	2	neutral	AA	100	somatic	0	0.00528632133862177	0.0177768088053591
22	41727235	41737311	2	neutral	AA	36.3786	somatic	0	0.143581418638105	0.324141473500001
22	42520720	42566062	3	gain	AAB	3.36605	germline	1	9.71259662986423e-07	2.27185436685318e-07
22	49825820	49861086	2	neutral	AA	93.6223	somatic	0	0.836930000821978	0.909197253195921
22	50380000	50425342	2	neutral	AA	15.5826	somatic	0	0.0866267711876189	0.0788670850148121
X	3524081	3526600	2	gain	-	-1	somatic	0	0.591064876045058	0.784096321535653
X	24091716	24099273	0	loss	-	-1	germline	1	0.0143085088569957	0.0366369208555641
X	78267849	78270368	2	gain	-	-1	germline	1	0.0879558484251473	0.278091881864924
X	93540546	93548103	0	loss	-	-1	germline	1	0.0143143559669961	0.0366548237889595
X	108772939	108777977	0	loss	-	-1	germline	1	0.0143091909112484	0.0366401486878625
X	119738146	119743184	0	loss	-	-1	somatic	0	0.0143111397957178	0.0366460181113263
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