chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5668303	5673549	4	gain	AABB	0.888665	somatic	0	0.01431246365861	0.0366411206543228
1	10494623	10510361	2	neutral	AA	100	somatic	0	0.390281898490962	0.572439305391926
1	10518230	10565444	2	neutral	AA	54.5678	somatic	0	0.47121973422418	0.646293879296419
1	10979878	11252670	2	neutral	AA	14.7861	germline	1	8.06884832748961e-06	4.63746681991228e-05
1	14896017	14979953	2	neutral	AA	22.2597	somatic	0	0.00544429965855042	0.00614529249818196
1	16503916	16506539	2	neutral	AA	100	somatic	0	0.593138692306889	0.785427753727129
1	16611459	16637689	6	gain	AAAABB	21.3892	somatic	0	0.000532342580983006	0.00067120467856352
1	16721625	16939334	3	gain	AAB	0.948169	somatic	0	1.98442027742792e-09	7.59529106275636e-11
1	23887661	23900776	2	neutral	AA	15.7082	somatic	0	0.146756371660519	0.0684765843402617
1	31431409	31434032	5	gain	AAAAA	4.80363	germline	1	0.0832805675092876	0.270064747320555
1	36270844	36283959	2	neutral	AA	27.2974	somatic	0	0.222803034652569	0.687434059628578
1	36687901	36808559	2	neutral	AA	7.65467	somatic	0	0.0528654949617478	0.233226865928613
1	37781692	37904973	2	neutral	AA	21.8271	somatic	0	0.189093274337712	0.518854347975401
1	40493874	40567318	2	neutral	AA	100	somatic	0	0.00109232668692378	0.000183226291766592
1	44866415	44887399	2	neutral	AA	54.5678	somatic	0	0.116523990315049	0.208383566585588
1	44966089	45029041	2	neutral	AA	22.0512	somatic	0	0.000946707528730253	0.000814160340658621
1	48074344	48234347	2	neutral	AA	18.2721	germline	1	0.0191116698175971	0.0140475779222469
1	55662683	55667929	0	loss	-	-1	somatic	0	0.0143129703324837	0.0366496650536537
1	60895568	60932290	2	neutral	AA	54.5678	somatic	0	0.844598465888484	0.798650526683512
1	65506802	65632706	2	neutral	AA	36.379	somatic	0	0.793525522329921	0.871615453974374
1	66514034	66713382	2	neutral	AA	30.4286	somatic	0	0.00760765280052189	0.0167572845558615
1	73910894	73924009	1	loss	A	-1	somatic	0	0.000283724069701243	0.000267642564416692
1	76174543	76185035	2	neutral	AA	100	somatic	0	0.569661583279522	0.876965761214401
1	92610261	92762395	2	neutral	AA	21.4529	somatic	0	0.000272635105805163	0.000795658731745919
1	124941359	124975458	3	gain	-	-1	somatic	0	2.0443069499545e-07	3.06620823176118e-08
1	125069886	125075132	3	gain	-	-1	somatic	0	0.0143180379415125	0.0366514962231518
1	125080378	125083001	8	gain	-	-1	germline	1	0.0832760729333532	0.270056941499491
1	125083001	125085624	5	gain	-	-1	germline	1	0.0832805675092876	0.270064747320555
1	125085624	125161691	3	gain	-	-1	germline	1	0.0330923991384499	0.00967263789180162
1	125161691	125164314	4	gain	-	-1	germline	1	0.0832824938162702	0.270068092722855
1	125164314	125166937	6	gain	-	-1	germline	1	0.0832779991561211	0.27006028683121
1	125166937	143737777	1	loss	A	-1	somatic	0	2.42209358534048e-33	0
1	152582533	152614009	1	loss	A	-1	germline	1	3.09157443353337e-08	1.0264931127324e-09
1	169256944	169272682	1	loss	A	-1	germline	1	5.34203978719801e-05	3.63873588188346e-05
1	173002588	173013080	2	neutral	AA	100	germline	1	0.0725554995848222	0.171889026424183
1	182059807	182075545	2	neutral	AA	27.2887	somatic	0	0.898953039188319	0.860232986855206
1	196769591	196827297	1	loss	A	-1	germline	1	4.8468465200346e-05	3.30607782861314e-05
1	209905575	209913444	1	loss	A	-1	somatic	0	0.00467034088590186	0.00941608194648069
1	224012069	224014692	8	gain	AAAAAAAA	2.78994	germline	1	0.083276715003599	0.270058056606703
1	228067227	228072473	1	loss	A	-1	somatic	0	0.0143452273118268	0.0367397923928877
1	234776861	234782107	7	gain	AAAAABB	3.70808	germline	1	0.0143099305265606	0.0366371542042592
1	236096230	236098853	5	gain	AAABB	15.892	germline	1	0.0832799254149807	0.270063632193177
1	237449698	237517896	2	neutral	AA	15.6808	somatic	0	0.723289194882984	0.665139650287783
1	246197403	246294454	2	neutral	AA	7.66142	somatic	0	0.746353719075093	0.600217252288056
2	3179076	3181699	6	gain	-	-1	germline	1	0.083277357077855	0.270059171717276
2	35751490	35767228	1	loss	A	-1	somatic	0	8.03723165840412e-05	4.42418185311322e-05
2	41010605	41023720	1	loss	A	-1	somatic	0	0.000243871164628629	0.000248011857048036
2	52522952	52557051	1	loss	A	-1	germline	1	8.77182625368516e-08	5.1748779705818e-09
2	89772175	89774798	4	gain	-	-1	germline	1	0.0832850622817247	0.27007255330631
2	89774798	89782667	8	gain	-	-1	germline	1	0.00270091270765334	0.00495895978307437
2	89782667	89790536	4	gain	-	-1	germline	1	0.0143128689964432	0.0366423411760813
2	89795782	89824635	4	gain	-	-1	somatic	0	2.03839741579211e-07	3.05188015969904e-08
2	89824635	89842996	26	gain	-	-1	germline	1	4.59503510997866e-06	1.66409994073469e-06
2	89842996	89850865	4	gain	-	-1	germline	1	0.00270141119291699	0.00495957926584079
2	91411550	91414173	5	gain	-	-1	somatic	0	0.0832805675092876	0.270064747320555
2	109198113	109200736	14	gain	-	-1	germline	1	0.0832715785539157	0.270049135843119
2	132243791	132246414	4	gain	-	-1	somatic	0	0.0832805675092876	0.270064747320555
2	179203360	179213852	1	loss	A	-1	somatic	0	0.000956939676670156	0.00125753474147206
2	238971038	238973661	2	neutral	AA	100	somatic	0	0.814827106728969	0.904055502022445
2	239083827	239102188	2	neutral	AA	12.2085	somatic	0	0.75447270644414	0.657274040763905
2	239123172	239125795	3	gain	AAB	6.2388	somatic	0	0.083724569520533	0.270834986584654
2	239301536	239304159	2	neutral	AA	100	somatic	0	0.160229888864869	0.385339976327325
2	239343504	239346127	2	neutral	AA	100	somatic	0	0.692346785969798	0.844933519166423
2	239474654	239477277	2	neutral	AA	87.9744	somatic	0	0.16058493320546	0.385817454994195
2	239592689	239603181	2	neutral	AA	16.4866	somatic	0	0.811675391527075	0.763919050603281
2	239650395	239653018	2	neutral	AA	100	somatic	0	0.603812385885895	0.792341556357207
2	239700232	239708101	2	neutral	AA	54.1987	somatic	0	0.531402773455729	0.975858055946053
2	239718593	239721216	2	neutral	AA	19.3063	somatic	0	0.0957805394541258	0.291139885742219
2	239957286	239975647	2	neutral	AA	54.6557	somatic	0	0.118591936072803	0.242609328067171
2	240167126	240169749	2	neutral	AA	100	somatic	0	0.130473921125394	0.344306929718286
2	240195979	240201225	2	neutral	AA	54.5678	somatic	0	0.0928811677383158	0.182024560638527
2	240471394	240474017	2	neutral	AA	100	somatic	0	0.439445232729329	0.672389577711776
2	240809761	240833368	2	neutral	AA	14.5482	somatic	0	0.272891555465325	0.644915776281406
2	240835991	240838614	2	neutral	AA	100	somatic	0	0.54045400120366	0.749583022923532
2	241051077	241053700	2	neutral	AA	72.6512	somatic	0	0.717114427730339	0.858143910557245
2	241211080	241213703	2	neutral	AA	100	somatic	0	0.384673852245247	0.625614356497337
2	241297639	241300262	2	neutral	AA	100	somatic	0	0.157463296085781	0.381668888069535
2	241496987	241499610	2	neutral	AA	100	somatic	0	0.866265917897086	0.924220961874967
2	241588792	241591415	4	gain	AABB	25.2822	somatic	0	0.0832812096076049	0.270065862451294
2	241693712	241696335	2	neutral	AA	61.0892	somatic	0	0.265763173494528	0.509977316420183
2	241754041	241785517	2	neutral	AA	39.095	somatic	0	0.0866402384507433	0.35583312389042
3	380335	401319	2	neutral	AA	54.5714	somatic	0	0.255404740898411	0.146753341602352
3	2022333	2027579	2	neutral	AA	100	somatic	0	0.758850326981155	0.989285216618894
3	4272867	4280736	2	neutral	AA	100	somatic	0	0.951843834429958	0.975549873309181
3	6620452	6665043	2	neutral	AA	57.9243	somatic	0	0.324793049624365	0.63282424229391
3	8257204	8283434	2	neutral	AA	23.8014	somatic	0	0.81027782812904	0.88098723049624
3	10457901	10486754	2	neutral	AA	54.5856	germline	1	0.00100413752004085	0.00034895747871122
3	17109829	18788549	2	neutral	AA	10.049	somatic	0	3.64874011968955e-07	0.000275311619888918
3	19407577	19454791	2	neutral	AA	100	somatic	0	0.753526219943944	0.721829028762743
3	25340803	25406378	2	neutral	AA	54.5678	somatic	0	0.0371943816216908	0.158604808851264
3	33828831	33881291	2	neutral	AA	100	somatic	0	0.0995973945312433	0.0461451402061419
3	34261626	34668191	2	neutral	AA	100	somatic	0	7.16220160184635e-08	1.2055269317246e-05
3	36108218	36131825	2	neutral	AA	100	somatic	0	0.397233924060486	0.5756684866299
3	42308990	42332597	2	neutral	AA	100	somatic	0	0.682256641964657	0.510671472952239
3	42909657	42930641	2	neutral	AA	100	somatic	0	0.118833104294849	0.258071534142988
3	50277664	50372092	2	neutral	AA	37.3824	somatic	0	0.000101539502192299	0.00226040211245992
3	52444262	52488853	2	neutral	AA	13.6966	somatic	0	0.00246658884094441	0.00520528064079906
3	52992469	53005584	1	loss	A	-1	somatic	0	0.00026957100382969	0.000260221460441135
3	56444337	56457452	2	neutral	AA	100	somatic	0	0.225351086620809	0.270189337331884
3	57239106	57246975	2	neutral	AA	100	somatic	0	0.111899788339624	0.123260343503542
3	66978305	66988797	1	loss	A	-1	somatic	0	0.00107925523694061	0.00156784236248664
3	67059618	67067487	3	gain	-	-1	germline	1	0.00270244535628951	0.00496106631391657
3	68520629	68544236	2	neutral	AA	54.5678	somatic	0	0.774341639504589	0.946896490203551
3	68688501	68698993	1	loss	A	-1	germline	1	0.0210085119290324	0.0574054527350181
3	68856373	68995392	2	neutral	AA	24.7721	somatic	0	0.0446530657567627	0.0801025389252118
3	74068274	74383034	2	neutral	AA	38.4504	somatic	0	3.15443602364523e-05	0.00093581608934945
3	74920749	75883390	2	neutral	AA	0.71247	somatic	0	8.78455769231781e-06	0.000664565802274142
3	76515533	76872261	2	neutral	AA	100	somatic	0	0.036686060177992	0.0481268083449001
3	78369994	78404093	2	neutral	AA	54.5678	somatic	0	0.0888236897451077	0.214388192048385
3	87175405	87185897	2	neutral	AA	100	somatic	0	0.489457235966727	0.210225745940107
3	88101324	88177391	2	neutral	AA	33.8301	somatic	0	0.417785701154997	0.556155282824138
3	90393826	90456778	2	neutral	AA	2.56265	germline	1	0.000650694265008597	0.00520165582562426
3	90669241	90713832	1	loss	A	-1	germline	1	3.79807103374349e-09	1.19512510998732e-10
3	97538878	97635929	2	neutral	AA	92.4287	somatic	0	0.246291882076578	0.478864055321195
3	98113315	98165775	2	neutral	AA	4.27501	somatic	0	0.0171410740748961	0.0214047250412621
3	99228090	99230713	0	loss	-	-1	germline	1	0.0832651583527125	0.270037985191138
3	105796082	105835427	2	neutral	AA	25.6361	somatic	0	0.177298983720589	0.288650865487478
3	108762695	109153522	2	neutral	AA	100	somatic	0	0.0890081107179828	0.0694441813126594
3	117080228	117093343	2	neutral	AA	100	somatic	0	0.222571475093571	0.406766221309591
3	119892084	120109793	2	neutral	AA	27.2874	somatic	0	0.00863039334578356	0.00123625154760965
3	128125681	128288307	2	neutral	AA	18.1767	somatic	0	0.0216746823544374	0.0325026619926294
3	128605690	128624051	2	neutral	AA	36.3795	germline	1	0.555836717373561	0.668595182977204
3	146665045	146672914	1	loss	A	-1	germline	1	0.0212736376937782	0.0582470705060708
3	153267136	153282874	2	neutral	AA	21.8273	somatic	0	0.305055721720028	0.22455157571323
3	155525539	155530785	2	neutral	AA	54.5678	somatic	0	0.712054563664761	0.546510713978532
3	162806987	162827971	1	loss	A	-1	germline	1	6.2473630917167e-06	1.31147150883582e-06
3	165015553	165065390	2	neutral	AA	36.3786	somatic	0	0.958728756026528	0.700599538376856
3	175111480	175127218	2	neutral	AA	100	somatic	0	0.650670799831291	0.77287510234561
3	186023160	186070374	2	neutral	AA	100	germline	1	0.115794952037197	0.158644406384246
3	189013380	189123546	2	neutral	AA	36.3517	somatic	0	0.42818529456588	0.670102315696098
3	194652830	194702667	2	neutral	AA	61.9856	somatic	0	0.495748910639008	0.767740250021781
4	125904	133773	1	loss	A	-1	somatic	0	0.0050266187024232	0.00956464022614334
4	7863754	7866377	4	gain	AABB	20.4338	germline	1	0.0832844201593456	0.270071438155405
4	9471653	9476899	1	loss	A	-1	somatic	0	0.016980426028414	0.0435881807092126
4	9715592	9985761	2	neutral	AA	7.00548	somatic	0	5.5647590189704e-06	7.19741016030895e-06
4	9993630	10053959	2	neutral	AA	29.6941	germline	1	0.0227136101528605	0.0575591412979733
4	10208716	10232323	1	loss	A	-1	germline	1	2.03328385284565e-06	2.37593821950099e-07
4	10389703	10400195	1	loss	A	-1	germline	1	0.00149198183117969	0.00159328966204031
4	11457264	11462510	2	neutral	AA	100	germline	1	0.722154171713985	0.886798275448442
4	13841571	13983213	2	neutral	AA	100	somatic	0	5.25257757448688e-06	0.000574725603225579
4	17303931	17311800	2	neutral	AA	100	somatic	0	0.0762325939852339	0.059855560558789
4	22775509	22827969	2	neutral	AA	21.8311	somatic	0	0.136728279734669	0.162702612234682
4	35121970	35145577	2	neutral	AA	54.5678	somatic	0	0.00399912380458803	0.00739041976880639
4	40294526	40297149	4	gain	AAAA	17.3127	germline	1	0.0832882729537763	0.270078129111253
4	49047477	49089445	2	neutral	AA	72.3095	somatic	0	0.562528173059314	0.410880729087754
4	55641699	55657437	2	neutral	AA	54.5678	somatic	0	0.293796285404233	0.510534422934059
4	58416833	58450932	2	neutral	AA	54.5791	somatic	0	0.975977224199296	0.768660583462362
4	62802489	62810358	1	loss	A	-1	somatic	0	0.00531696705564108	0.00992582727348168
4	63828082	63851689	1	loss	A	-1	germline	1	2.36171650779462e-05	7.62207314930485e-06
4	67340279	67500282	2	neutral	AA	61.5315	somatic	0	0.865183370455295	0.970215866254448
4	70619029	70624275	1	loss	A	-1	germline	1	0.0183410183968695	0.0429055794702569
4	77750966	77756212	2	neutral	AA	100	somatic	0	0.510182510864459	0.902903701248202
4	83618617	83652716	2	neutral	AA	100	germline	1	0.295220061616334	0.234139076676888
4	105179677	105392140	2	neutral	AA	100	somatic	0	0.204914409811901	0.161040499868564
4	106134449	106142318	1	loss	A	-1	germline	1	0.00635888422602093	0.00949306464813193
4	110231575	110305019	2	neutral	AA	31.1677	somatic	0	0.00729040908659961	0.00332237832843885
4	115244128	115257243	1	loss	A	-1	germline	1	0.000282433761223744	0.00027868741985615
4	127876496	127886988	2	neutral	AA	54.5678	somatic	0	0.285883968209962	0.261391937434792
4	127886988	127981416	2	neutral	AA	36.3921	somatic	0	2.05703142525534e-07	2.32315351400558e-08
4	130861470	130871962	2	neutral	AA	100	somatic	0	0.553685054937509	0.831362225358026
4	137169785	137180277	1	loss	A	-1	somatic	0	0.00175579398975244	0.00163606886740697
4	141954137	142011843	2	neutral	AA	36.38	somatic	0	0.0470086774756179	0.0860738547318003
4	150187734	150224456	2	neutral	AA	100	somatic	0	0.250325183004993	0.20872705891021
4	157230489	157456067	2	neutral	AA	73.6191	somatic	0	0.320782979679557	0.399019725359611
4	157474428	157526888	2	neutral	AA	100	germline	1	0.187834384993523	0.0972762364730065
4	161721065	161752541	2	neutral	AA	27.2876	somatic	0	0.760139517632726	0.814283933057696
4	165081128	165083751	0	loss	-	-1	somatic	0	0.0832658003547883	0.270039100241212
4	173595386	173637354	2	neutral	AA	100	somatic	0	0.386698603671427	0.216902523593681
4	176053137	176158057	2	neutral	AA	27.4943	germline	1	0.315257075233524	0.161465320024504
4	182941135	182964742	2	neutral	AA	100	somatic	0	0.271140946123931	0.176869601113733
5	7685390	7785064	2	neutral	AA	9.94084	somatic	0	0.0407317520237723	0.100772690703339
5	10735939	10746431	2	neutral	AA	100	somatic	0	0.931277141948423	0.7489540493598
5	17012778	17028516	2	neutral	AA	42.9849	somatic	0	0.465497669061514	0.730207853899898
5	19801027	19837749	2	neutral	AA	53.2837	somatic	0	0.353523052758449	0.661204675055549
5	20831866	20834489	4	gain	AABB	2.49937	somatic	0	0.0832850622817247	0.27007255330631
5	22481733	22670589	2	neutral	AA	100	somatic	0	0.657236881059152	0.604019013668466
5	24386031	24425376	2	neutral	AA	54.5678	somatic	0	0.94108626375194	0.975853958211835
5	35022296	35030165	2	neutral	AA	54.5678	germline	1	0.690550795421071	0.838245041337832
5	45370031	45377900	1	loss	A	-1	somatic	0	0.00525665852384196	0.00932819678787822
5	46269720	46274966	1	loss	A	-1	somatic	0	0.0229232632412063	0.0539800973099434
5	50936037	50943906	1	loss	A	-1	somatic	0	0.0117800742901575	0.0223059153618064
5	52908533	52913779	1	loss	A	-1	somatic	0	0.0237607277845063	0.0654226190335738
5	59594560	59599806	2	neutral	AA	100	somatic	0	0.936860062468696	0.96856595868566
5	64683180	64701541	2	neutral	AA	100	somatic	0	0.0475686476782848	0.310948506056202
5	64701541	64798592	2	neutral	AA	27.3837	somatic	0	0.11316926237303	0.0153379062671809
5	82708436	82729420	2	neutral	AA	27.2839	somatic	0	0.459535552867887	0.674782614535296
5	83146477	83235659	2	neutral	AA	38.4471	somatic	0	0.537924147233523	0.933918961909707
5	84652079	84659948	0	loss	-	-1	germline	1	0.0143184434185992	0.0366682856739908
5	86918351	86923597	1	loss	A	-1	somatic	0	0.0176051462738253	0.0467198723568238
5	91201710	91206956	1	loss	A	-1	somatic	0	0.0233409503939616	0.0648420135146432
5	106386257	106391503	1	loss	A	-1	somatic	0	0.0243709338581107	0.0610471932203341
5	110139770	110152885	3	gain	AAB	100	somatic	0	0.000107759106020776	9.09748832556012e-05
5	112555553	112568668	2	neutral	AA	100	somatic	0	0.870897479705601	0.984634270650334
5	112817853	112833591	2	neutral	AA	36.3786	germline	1	0.195698718518738	0.431881880874314
5	120044218	120049464	1	loss	A	-1	somatic	0	0.0211647977443341	0.0547273636680491
5	134806462	134864168	2	neutral	AA	81.3103	somatic	0	0.000332628002757712	0.00140157766629345
5	135779595	135784841	1	loss	A	-1	somatic	0	0.0170956018848745	0.0439294329836847
5	136123208	136165176	2	neutral	AA	100	somatic	0	0.301946614568894	0.55741984799791
5	137516021	137521267	1	loss	A	-1	somatic	0	0.0232858883249516	0.064673729839936
5	137778321	137870126	2	neutral	AA	100	germline	1	0.691014983999181	0.311065211094432
5	137870126	138106196	2	neutral	AA	17.5382	somatic	0	7.74708542922774e-09	9.16288822594424e-09
5	141175106	141177729	6	gain	AAAAAB	100	germline	1	0.0832779991561211	0.27006028683121
5	165068013	165172933	2	neutral	AA	34.2854	somatic	0	0.749829331796442	0.82470078123876
5	171016977	171027469	2	neutral	AA	100	germline	1	0.485201730007085	0.679143250850566
5	172569793	172609138	2	neutral	AA	12.2497	somatic	0	0.00741845604882829	0.025679343396448
5	173173083	173201936	2	neutral	AA	54.5682	germline	1	0.80623169723113	0.832514827917176
5	178584332	178586955	6	gain	AAAABB	38.3293	germline	1	0.083277357077855	0.270059171717276
5	178849255	178880731	2	neutral	AA	55.7511	germline	1	0.634633530314616	0.573134117485636
5	178920076	178930568	1	loss	A	-1	somatic	0	0.00661597991036353	0.0123664004816741
5	180950278	181002738	1	loss	A	-1	germline	1	2.4088164747356e-13	5.55111512312578e-16
6	296399	382958	4	gain	-	-1	germline	1	5.2653499598279e-22	0
6	20957770	20960393	4	gain	-	-1	somatic	0	0.0832857044081142	0.270073668460576
6	32488478	32564545	0	loss	-	-1	germline	1	1.26795395841835e-08	3.18247217467871e-09
6	32564545	32575037	1	loss	A	-1	germline	1	NA	NA
6	32575037	32577660	3	gain	-	-1	somatic	0	0.0833390148802567	0.270166237981567
6	32577660	32582906	1	loss	A	-1	germline	1	NA	NA
6	32582906	32588152	0	loss	-	-1	germline	1	0.0143100318442487	0.0366399001681367
6	32588152	32666842	1	loss	A	-1	germline	1	9.07028725674831e-07	4.70246842576572e-08
6	35657062	35662308	1	loss	A	-1	somatic	0	0.0174373540897751	0.046200562001277
6	35785589	35788212	4	gain	-	-1	germline	1	0.0832844201593456	0.270071438155405
6	35788212	35798704	6	gain	-	-1	germline	1	0.000532339012928412	0.000671193499556799
6	54062653	54070522	1	loss	A	-1	germline	1	0.016721588149921	0.0439870105995582
6	60231949	60239818	3	gain	-	-1	somatic	0	0.00270301799513103	0.00496329765236736
6	73882041	73892533	1	loss	A	-1	somatic	0	0.0016035545133304	0.00151002350924134
6	76730619	76743734	1	loss	A	-1	somatic	0	0.00482585136137872	0.00730292060959004
6	78257205	78325403	1	loss	A	-1	germline	1	8.49692285798142e-17	0
6	103288494	103314724	1	loss	A	-1	germline	1	1.02316311654409e-06	2.13608717491987e-07
6	109790911	109919438	2	neutral	AA	62.1217	somatic	0	0.841023952439974	0.476596868176559
6	113901152	113903775	1	loss	A	-1	somatic	0	0.117182739706772	0.324719935861575
6	118643536	118648782	3	gain	AAA	10.76	somatic	0	0.014320065428239	0.0366637060656518
6	134218910	134234648	2	neutral	AA	81.0379	somatic	0	0.0299386482695221	0.0482108564931136
6	142793497	142851203	2	neutral	AA	100	somatic	0	0.318616603986981	0.0973173454179606
6	144613859	144700418	2	neutral	AA	54.5777	somatic	0	0.673875748944069	0.972423607048867
6	148133925	148157532	2	neutral	AA	54.5681	somatic	0	0.0935996937635492	0.0693749230108524
6	153141232	153162216	2	neutral	AA	54.5678	somatic	0	0.761419646485106	0.96269007231493
6	169445800	169464161	2	neutral	AA	54.5678	somatic	0	0.0381035198709021	0.0628787006704926
7	9762806	9765429	0	loss	-	-1	somatic	0	0.0832658003547883	0.270039100241212
7	15006183	15048151	1	loss	A	-1	germline	1	9.32634222021136e-11	8.05466804365551e-13
7	22395174	22397797	0	loss	-	-1	somatic	0	0.0832760729333532	0.2700569414995
7	26096227	26106719	1	loss	A	-1	somatic	0	0.00126568293453619	0.0015934400396117
7	45440852	45448721	1	loss	A	-1	somatic	0	0.00561882271516862	0.00958913459201927
7	48541238	48551730	1	loss	A	-1	somatic	0	0.00121741731042934	0.00148227397286282
7	51526212	51531458	0	loss	-	-1	germline	1	0.0143065873978279	0.0366325779979303
7	54453480	54456103	0	loss	-	-1	somatic	0	0.0832651583527125	0.270037985191138
7	57409601	57417470	1	loss	A	-1	somatic	0	0.0047575510867045	0.00943276900352319
7	57485668	57498783	3	gain	-	-1	somatic	0	0.000111842208257355	0.000101760343055979
7	57905348	57915840	1	loss	A	-1	somatic	0	0.0018727546797194	0.00156224718465381
7	58062728	58065351	4	gain	-	-1	somatic	0	0.0832831359266183	0.270069207863677
7	61097539	61108031	3	gain	AAB	18.2488	somatic	0	0.0368209045806169	0.13941333747609
7	62296250	62359202	3	gain	AAB	0.413267	germline	1	3.39855647100613e-09	3.56842004833879e-08
7	62401170	62406416	4	gain	-	-1	germline	1	0.0143117543417674	0.0366411206543228
7	62437892	62456253	3	gain	AAB	2.20806	germline	1	8.58438078649791e-05	0.000318249427632145
7	63835951	64955972	2	neutral	AA	2.13201	somatic	0	0.991180200162771	0.0607648456751121
7	65391390	65428112	2	neutral	AA	2.18271	germline	1	0.946258214182199	0.834311421265692
7	68701616	68756699	2	neutral	AA	32.3977	somatic	0	0.373352297968149	0.372107912274012
7	71408552	71421667	2	neutral	AA	36.3786	somatic	0	0.466545038481008	0.575340913699762
7	71943644	71948890	2	neutral	AA	100	somatic	0	0.376005245446582	0.707428531430248
7	96870013	96930342	2	neutral	AA	100	somatic	0	0.643389399148441	0.709304253959038
7	98889723	98897592	2	neutral	AA	100	somatic	0	0.477763346118963	0.647578818940983
7	100951401	100954024	4	gain	AAAA	4.72069	germline	1	0.0832882729537763	0.270078129111253
7	100954024	100959270	8	gain	AAAAAAAA	13.4171	germline	1	0.0143130716691571	0.036649359866517
7	100959270	100972385	3	gain	AAB	0.584373	germline	1	0.000107748408223148	9.10165576759603e-05
7	109442052	109449921	2	neutral	AA	100	somatic	0	0.773860763631741	0.931148973908909
7	116290705	116301197	1	loss	A	-1	somatic	0	0.000896363211896413	0.00157377823472571
7	125166937	125201036	2	neutral	AA	30.5943	somatic	0	0.116082391297492	0.192633002889961
7	129285047	129313900	2	neutral	AA	54.5678	somatic	0	0.226703735982634	0.374503544309252
7	134987449	135194666	2	neutral	AA	100	somatic	0	0.0516002959497429	0.0716632174407327
7	141238058	141293141	2	neutral	AA	100	somatic	0	0.29503320175655	0.708853567252003
7	143847943	143850566	4	gain	AABB	47.0712	somatic	0	0.0832805675092876	0.270064747320555
7	144952226	144967964	2	neutral	AA	54.5678	somatic	0	0.468700509146296	0.32189024605001
7	148978531	149104435	2	neutral	AA	100	somatic	0	9.21495049979817e-05	5.89292642964034e-05
7	150832992	150851353	2	neutral	AA	100	somatic	0	0.0831588555668454	0.186521419918408
7	152401546	152406792	9	gain	AAAAAAABB	3.4169	germline	1	0.0143095252621359	0.0366368491082768
7	152406792	152409415	4	gain	AAAB	6.87722	germline	1	0.0832805675092876	0.270064747320555
7	155672427	155727510	2	neutral	AA	79.3326	somatic	0	0.246928821080156	0.0958099565183219
7	157831156	157888862	2	neutral	AA	70.9568	somatic	0	0.263029121228455	0.350022881486493
7	158148539	158153785	4	gain	AAAA	12.3197	somatic	0	0.0143116530133213	0.0366399001681345
7	158497398	158581334	2	neutral	AA	35.0496	somatic	0	0.0869335611131831	0.140654760765649
7	158594449	158597072	5	gain	AAABB	14.0147	somatic	0	0.0832799254149807	0.270063632193177
8	642635	650504	1	loss	A	-1	germline	1	0.0253467457181112	0.0567163388139204
8	4264998	4267621	0	loss	-	-1	somatic	0	0.0832696524514502	0.27004579061224
8	6111590	6114213	0	loss	-	-1	germline	1	0.0832658003547883	0.270039100241212
8	6609960	6651928	2	neutral	AA	11.8602	somatic	0	0.50323276888539	0.564121620590576
8	25115225	25133586	1	loss	A	-1	germline	1	8.16044826968285e-06	4.38977915206973e-06
8	37382996	37398734	2	neutral	AA	54.5686	somatic	0	0.0953121116716692	0.165082791330082
8	38072845	38078091	1	loss	A	-1	somatic	0	0.0207009155565868	0.056303546237556
8	38581707	38615806	2	neutral	AA	54.5678	somatic	0	0.358342791352506	0.193843560783947
8	39014502	39030240	2	neutral	AA	36.3786	somatic	0	0.763931400480072	0.846943270867614
8	39376476	39528610	1	loss	A	-1	germline	1	1.58531881197411e-33	0
8	43237532	43240155	6	gain	AAAABB	1.15998	germline	1	0.0832792833246839	0.27006251706916
8	43240155	43242778	4	gain	AAAA	17.5834	germline	1	0.0832850622817247	0.27007255330631
8	43654589	43659835	3	gain	AAA	16.7452	somatic	0	0.0143140850707008	0.0366456977943324
8	46492675	46497921	1	loss	A	-1	somatic	0	0.029109231051113	0.0564974003072062
8	47172032	47193016	2	neutral	AA	36.3786	somatic	0	0.0431548118814874	0.0561862506178984
8	50117661	50125530	1	loss	A	-1	somatic	0	0.00598713058449736	0.0094723685729029
8	57548620	57564358	2	neutral	AA	100	somatic	0	0.0344611947788217	0.125079950793846
8	59222094	59224717	4	gain	AABB	82.4773	somatic	0	0.0832857044081142	0.270073668460576
8	60677859	60685728	2	neutral	AA	100	somatic	0	0.639229924693439	0.465343748893403
8	66144191	66183536	2	neutral	AA	18.7867	somatic	0	0.0640074452732519	0.0274171251479276
8	67413723	67447822	2	neutral	AA	36.3786	somatic	0	0.935557486197543	0.877726022925115
8	69181625	69194740	2	neutral	AA	100	somatic	0	0.000704790807623636	0.00102298142912227
8	77116200	77239481	2	neutral	AA	37.003	somatic	0	0.615731372504295	0.905097185954451
8	78642786	78671639	2	neutral	AA	36.3791	somatic	0	0.00570839274628929	0.00608542569376247
8	80329375	80418557	2	neutral	AA	27.7846	somatic	0	8.52852742957607e-05	0.00104239412210627
8	82760896	82823848	2	neutral	AA	54.5792	germline	1	0.853046845731843	0.962339075973331
8	105276728	105295089	2	neutral	AA	54.5678	somatic	0	0.91511500099325	0.987722476164135
8	106947579	106952825	2	neutral	AA	100	somatic	0	0.0791528020109462	0.221359332357718
8	111280775	111286021	1	loss	A	-1	somatic	0	0.0169531205815435	0.04446335916475
8	111487992	111503730	2	neutral	AA	100	germline	1	0.312251077083258	0.56954490717843
8	114302471	114365423	1	loss	A	-1	germline	1	1.56968889406515e-14	0
8	114622477	114630346	1	loss	A	-1	somatic	0	0.00324907420927317	0.00613390421217885
8	115023796	115034288	2	neutral	AA	54.5678	somatic	0	0.157689700254096	0.196452258093196
8	115446099	115579872	2	neutral	AA	19.9542	somatic	0	0.188923310262644	0.443467775840158
8	118326153	118588453	2	neutral	AA	100	germline	1	0.103965904011817	0.216733876372829
8	123747894	123837076	2	neutral	AA	100	somatic	0	0.377713702665327	0.583578916544148
8	142431523	142478737	2	neutral	AA	10.0111	germline	1	0.0258750081467796	0.226881051021998
8	143320720	143346950	2	neutral	AA	16.6014	somatic	0	0.479177804529638	0.693390415482692
8	143924010	143934502	2	neutral	AA	36.3786	somatic	0	0.815509110917609	0.766693890263144
8	144123358	144125981	6	gain	AAAAAB	100	germline	1	0.083277357077855	0.270059171717276
8	144125981	144149588	2	neutral	AA	9.63814	germline	1	0.338118939365222	0.699417297801311
9	18200997	18316409	2	neutral	AA	21.8271	somatic	0	0.0721012953153272	0.0755591379622644
9	22497471	22502717	1	loss	A	-1	germline	1	0.0199543349701703	0.0479882162622166
9	28774310	28797917	2	neutral	AA	54.579	somatic	0	0.634091704464918	0.963660404266081
9	29091693	29096939	1	loss	A	-1	germline	1	0.0233864674932299	0.053235727307548
9	32291753	32333721	2	neutral	AA	27.2879	somatic	0	0.614165246729336	0.916185667819886
9	33794732	33802601	2	neutral	AA	1.29989	somatic	0	0.00425849658559097	0.0109860342770892
9	38421704	38434819	2	neutral	AA	54.5679	somatic	0	0.0255484011240683	0.052249561232689
9	40879455	40882078	4	gain	AABB	8.72859	somatic	0	0.0832812096076049	0.270065862451294
9	40908308	40913554	5	gain	AAABB	7.42684	germline	1	0.0143106397636664	0.036638374610418
9	40913554	40916177	7	gain	AAAAABB	4.72647	germline	1	0.083276715003599	0.270058056606703
9	40924046	40929292	6	gain	AAAABB	1.46772	germline	1	0.0143101331625697	0.0366377644028926
9	69121296	69129165	1	loss	A	-1	germline	1	0.0207487259075425	0.0565738570490282
9	69304906	69638027	2	neutral	AA	39.1787	somatic	0	0.00273120420659796	0.0184716361483094
9	72064302	72069548	2	neutral	AA	100	somatic	0	0.316846339843564	0.438605651629067
9	80379212	80801515	2	neutral	AA	15.5023	somatic	0	0.000198714944016721	0.000175300800958622
9	103013079	103015702	0	loss	-	-1	germline	1	0.0832658003547883	0.270039100241212
9	103805225	103807848	1	loss	A	-1	somatic	0	0.0833698576452342	0.270219782730059
9	104366547	104371793	2	neutral	AA	100	somatic	0	0.962451812472865	0.99582160189604
9	110263051	110268297	1	loss	A	-1	somatic	0	0.0210634100363976	0.0547178547025866
9	113279501	113350322	2	neutral	AA	68.2439	somatic	0	0.0288355227779461	0.0136721479187546
9	118223856	118278939	2	neutral	AA	43.8293	somatic	0	0.13416080589927	0.366132219089324
9	129395213	129426689	2	neutral	AA	4.51186	somatic	0	0.760728210908957	0.474535775470088
9	129426689	129442427	3	gain	AAB	0.707886	germline	1	2.24413138177755e-05	1.29028837423384e-05
9	130507365	130512611	1	loss	A	-1	germline	1	0.0225925185902818	0.0501537027980303
9	131108032	131142131	2	neutral	AA	48.2112	somatic	0	0.167128137381523	0.240199156774633
9	137358641	137363887	1	loss	A	-1	somatic	0	0.0270113037243494	0.0759642336669095
9	137405855	137521267	2	neutral	AA	24.2329	somatic	0	0.509355143284957	0.275941279589712
10	4666317	4668940	0	loss	-	-1	somatic	0	0.0832735046924712	0.270052481104263
10	38484656	38526624	3	gain	-	-1	somatic	0	1.78219444140447e-09	1.66369752419016e-08
10	38526624	38529247	19	gain	-	-1	germline	1	0.0832702944815954	0.270046905685833
10	38573838	38581707	4	gain	-	-1	germline	1	0.00314024806696471	0.00651992638702392
10	39557463	39562709	1	loss	A	-1	somatic	0	0.0197375863641004	0.0532619024361008
10	41821112	41842096	2	neutral	AA	47.6306	somatic	0	0.000273635207843079	0.00143373761703114
10	41857834	41878818	19	gain	AAAAAAAAAAAAABBBBBB	9.27113	germline	1	0.000532142804240316	0.000671081719090139
10	42301121	42322105	3	gain	AAB	1.78767	somatic	0	4.06962969181213e-06	1.32616321234513e-05
10	46516282	46560873	4	gain	AABB	0.414688	germline	1	1.97667020253198e-11	1.87738713464114e-13
10	56654177	57223368	2	neutral	AA	4.01297	somatic	0	0.000764969294315821	0.00278900116763281
10	67077979	67093717	2	neutral	AA	100	somatic	0	0.12211474848675	0.0538663148736744
10	67725860	67728483	0	loss	-	-1	somatic	0	0.0832696524514502	0.27004579061224
10	67857010	67896355	2	neutral	AA	36.3786	somatic	0	0.000267015986349126	0.000697303562723794
10	69519992	69530484	1	loss	A	-1	germline	1	0.00117500865609738	0.00156323176915341
10	70167873	70241317	2	neutral	AA	8.93156	germline	1	0.0633053939091099	0.320260170773722
10	75503055	75568630	2	neutral	AA	100	somatic	0	0.182648791870682	0.354337088099508
10	97423466	97465434	2	neutral	AA	21.9481	somatic	0	0.0834994534694472	0.0477103117522762
10	99508751	99529735	2	neutral	AA	54.5679	somatic	0	0.524468292057218	0.553499958791601
10	103243903	103469481	2	neutral	AA	66.9082	somatic	0	3.71715393023024e-09	2.76221967521195e-08
10	111107657	111354219	2	neutral	AA	15.611	germline	1	1.44141160389714e-05	0.00192389538774407
10	114147714	114307717	2	neutral	AA	19.673	somatic	0	0.308578118515577	0.411625310822849
10	120466521	120469144	0	loss	-	-1	somatic	0	0.0832696524514502	0.27004579061224
10	126947954	126950577	4	gain	-	-1	germline	1	0.0832812096076049	0.270065862451294
10	127703378	127755838	2	neutral	AA	16.5837	germline	1	0.0664952536424144	0.0991526855616106
10	128464048	128466671	5	gain	AAABB	25.5737	germline	1	0.0832792833246839	0.27006251706916
10	130399822	130544087	2	neutral	AA	16.9604	somatic	0	7.27521743733373e-05	0.00124788975104639
10	131189345	131194591	1	loss	A	-1	somatic	0	0.0207946637547216	0.0566918278345616
10	132249037	132367072	2	neutral	AA	50.105	somatic	0	2.91441340103015e-08	3.32774729772112e-07
11	5762731	5788961	1	loss	A	-1	germline	1	3.13143070332416e-07	3.61549449268139e-08
11	18922322	18940683	3	gain	-	-1	germline	1	4.60484179706746e-06	1.66749850349923e-06
11	28986773	28992019	1	loss	A	-1	somatic	0	0.0218737747681384	0.0531555822447491
11	31371080	31376326	1	loss	A	-1	somatic	0	0.014518657666876	0.0372719387357182
11	50175367	50177990	0	loss	-	-1	somatic	0	0.0832696524514502	0.27004579061224
11	54755125	54778732	1	loss	A	-1	somatic	0	7.00845694012785e-06	1.60747946853501e-06
11	55232511	55250872	2	neutral	AA	4.66742	somatic	0	0.583417196643412	0.558207544901684
11	61000488	61066063	2	neutral	AA	54.9466	somatic	0	0.17325755186975	0.0507834152407132
11	63898903	63914641	2	neutral	AA	27.284	somatic	0	0.963526670488755	0.912011697323586
11	71361338	71405929	2	neutral	AA	5.43242	germline	1	0.0630668625686645	0.177653072093043
11	73457115	73493837	2	neutral	AA	54.5678	somatic	0	0.493767208485553	0.456986744658393
11	73493837	73575150	2	neutral	AA	36.3829	somatic	0	2.6518135388096e-05	0.000155011442530162
11	76958820	77016526	2	neutral	AA	100	somatic	0	0.407416316850801	0.24711476578801
11	93292241	93478474	2	neutral	AA	38.8466	somatic	0	0.0105337316416015	0.00477913895800219
11	104028180	104051787	2	neutral	AA	100	somatic	0	0.00411413654274116	0.0121171115723339
11	104395400	104403269	1	loss	A	-1	germline	1	0.0207768821876179	0.056048464103975
11	112269646	112340467	2	neutral	AA	16.6393	somatic	0	0.37153950875912	0.459970215283414
11	117636304	117657288	2	neutral	AA	36.3786	germline	1	0.635178251797566	0.885152214749889
11	119535356	119540602	2	neutral	AA	100	somatic	0	0.350564439315013	0.797568896271768
11	131519843	131653616	2	neutral	AA	75.3793	somatic	0	0.000237722346513212	0.00420253168808848
12	758047	765916	1	loss	A	-1	somatic	0	0.00394435033506157	0.0070378572178128
12	2255780	2258403	5	gain	AAABB	20.733	germline	1	0.0832799254149807	0.270063632193177
12	13031064	13156968	2	neutral	AA	15.6672	germline	1	0.391208183749858	0.254647022560812
12	29293664	29322517	2	neutral	AA	54.5678	somatic	0	0.599469403108001	0.58963177224246
12	30324503	30329749	1	loss	A	-1	somatic	0	0.0207382021848423	0.0565400628778305
12	31371080	31601904	2	neutral	AA	13.3967	somatic	0	1.80105505135252e-08	7.22569415412266e-08
12	39709597	39714843	1	loss	A	-1	somatic	0	0.025490130169549	0.0559241585263202
12	53965602	54025931	2	neutral	AA	21.8271	somatic	0	0.348117801949308	0.171756448940457
12	56470567	56780081	2	neutral	AA	20.4207	somatic	0	3.44022573257872e-12	2.54362086948845e-11
12	57511898	57577473	2	neutral	AA	26.8028	somatic	0	0.782502074046336	0.715650838738464
12	71962005	71964628	1	loss	A	-1	somatic	0	0.0833120350432223	0.270119392679409
12	92135498	92237795	2	neutral	AA	11.7803	somatic	0	0.741946628944127	0.449429286566982
12	104109493	104327202	2	neutral	AA	100	somatic	0	1.25286067004509e-05	7.52037178120002e-05
12	109866978	110105671	2	neutral	AA	70.542	germline	1	0.0160359126710537	0.00355581904142488
12	110105671	110882079	2	neutral	AA	10.4888	somatic	0	2.03030927217266e-28	0
12	130984751	131026719	2	neutral	AA	10.4207	somatic	0	0.442392002299539	0.456762646526008
12	132952001	132991346	2	neutral	AA	38.2833	somatic	0	0.263604173626125	0.353950859110583
13	22020085	22022708	0	loss	-	-1	germline	1	0.0832658003547883	0.270039100241212
13	26473939	26479185	1	loss	A	-1	somatic	0	0.0236565504537035	0.0504221321361542
13	31958632	31963878	1	loss	A	-1	somatic	0	0.0188934127298002	0.0461430881217882
13	36695770	36706262	2	neutral	AA	36.291	somatic	0	0.504872330353816	0.802616436433041
13	37498408	37511523	1	loss	A	-1	germline	1	0.00027334463191388	0.000256419874075653
13	40063702	40079440	2	neutral	AA	100	somatic	0	0.634356261348128	0.952276673244729
13	41703077	41831604	2	neutral	AA	37.6261	somatic	0	0.100935905449186	0.103715945919935
13	42529322	42534568	2	neutral	AA	100	somatic	0	0.379807674411173	0.38135265907472
13	43379174	43523439	2	neutral	AA	5.83012	somatic	0	0.0687927798327659	0.126320176420307
13	45763481	45829056	2	neutral	AA	42.2196	somatic	0	0.275303980477488	0.445773497757168
13	48050737	48095328	2	neutral	AA	100	somatic	0	0.292898013471829	0.321878775609506
13	53682318	53692810	2	neutral	AA	36.3786	somatic	0	0.306397131985372	0.556837252870373
13	57178777	57215499	1	loss	A	-1	germline	1	2.18313566875763e-09	3.02354807857341e-11
13	63028067	63059543	3	gain	AAB	0.377869	germline	1	7.50926223474655e-08	8.66563303336676e-08
13	63059543	63064789	3	gain	AAB	1.56129	germline	1	0.0143145917952072	0.0366484443184546
13	63064789	63067412	5	gain	AAABB	3.33294	germline	1	0.0832792833246839	0.27006251706916
13	63686440	63778245	1	loss	A	-1	germline	1	2.83286640717111e-12	1.87627691161651e-14
13	67712745	67736352	2	neutral	AA	54.5678	somatic	0	0.634342210330862	0.61226793756461
13	75474202	75482071	2	neutral	AA	36.3786	somatic	0	0.598631781259842	0.275212106672558
13	78907709	79167386	2	neutral	AA	25.5096	somatic	0	0.0154815143488272	0.0755965737727154
13	82593024	82598270	1	loss	A	-1	somatic	0	0.025554053490907	0.0532412147220938
13	83647470	83673700	2	neutral	AA	54.5678	somatic	0	0.829475527385186	0.841947034574888
13	86732118	86768840	2	neutral	AA	27.2839	germline	1	0.64526271281349	0.831426356142295
13	90608912	90643011	2	neutral	AA	27.5484	somatic	0	0.468382055911518	0.86703822520449
13	93040433	93056171	2	neutral	AA	54.5704	germline	1	0.309211251913664	0.535123113542991
13	97835277	97843146	2	neutral	AA	54.5678	somatic	0	0.098661530881437	0.0756098891368437
13	105515421	105520667	2	neutral	AA	100	somatic	0	0.925638972162162	0.740337800452248
13	108293178	108301047	1	loss	A	-1	germline	1	0.0234829685345249	0.0561296993172873
13	109216474	109219097	0	loss	-	-1	germline	1	0.083272862642276	0.270051366013857
13	111543075	111668979	2	neutral	AA	6.65945	somatic	0	0.000287599776387752	0.00170583856719453
13	113436881	113533932	2	neutral	AA	16.9671	somatic	0	0.115631190083117	0.206529411820537
14	16092105	16094728	6	gain	-	-1	germline	1	0.083277357077855	0.270059171717276
14	34348185	34350808	0	loss	-	-1	germline	1	0.0832658003547883	0.270039100241212
14	35137708	35145577	1	loss	A	-1	germline	1	0.00361545684149119	0.00814988140248474
14	46280212	46301196	1	loss	A	-1	germline	1	3.72796972561732e-06	1.06793195575605e-06
14	46387755	46665793	2	neutral	AA	100	somatic	0	0.107015687634107	0.120404567906438
14	49021247	49023870	0	loss	-	-1	somatic	0	0.083276715003599	0.270058056606711
14	52528198	52530821	1	loss	A	-1	somatic	0	0.0855171560057156	0.273927452323461
14	67657662	67697007	2	neutral	AA	27.2845	germline	1	0.239625013753767	0.34365836790943
14	69580321	69698356	2	neutral	AA	100	somatic	0	0.400890630739169	0.260645645385215
14	74230900	74254507	2	neutral	AA	19.1775	somatic	0	0.202226184389532	0.345959698519736
14	79639526	79647395	1	loss	A	-1	germline	1	0.0072030063303113	0.00919732802906092
14	84830443	84835689	1	loss	A	-1	germline	1	0.0262821758121878	0.053111757429349
14	99925808	99928431	5	gain	AAABB	4.09043	germline	1	0.0832792833246839	0.27006251706916
14	101712071	101725186	2	neutral	AA	27.2962	somatic	0	0.0097461077230332	0.0111223931683968
14	104854425	104862294	1	loss	A	-1	somatic	0	0.00763575097680517	0.00970526133012783
14	105279351	106876758	2	neutral	AA	20.3977	germline	1	0.000140571005209026	0.00272037280292625
15	0	17080976	6	gain	-	-1	somatic	0	NA	NA
15	17080976	17083599	14	gain	-	-1	germline	1	0.0832715785539157	0.270049135843119
15	17083599	20653502	6	gain	-	-1	somatic	0	1.02046732389658e-12	1.3363754547413e-12
15	20656125	20671863	6	gain	-	-1	germline	1	2.21113801500448e-05	1.22964094030342e-05
15	22224679	22271893	4	gain	AAAB	2.57364	germline	1	4.59944114279361e-06	1.66492469133583e-06
15	26264099	26340166	2	neutral	AA	100	somatic	0	0.15940779968727	0.18528081805115
15	40491251	40569941	2	neutral	AA	100	somatic	0	0.400281582091618	0.3855487936647
15	40569941	40803388	2	neutral	AA	97.6264	germline	1	1.2708480614872e-08	2.27887885229094e-07
15	48528123	48551730	2	neutral	AA	36.3786	somatic	0	0.0643528828279747	0.038855193440664
15	50317009	50330124	2	neutral	AA	100	somatic	0	0.273617750769556	0.201316879475381
15	51880317	51998352	2	neutral	AA	47.7087	somatic	0	0.000434339060944297	0.000316338761570334
15	52077042	52098026	2	neutral	AA	36.3786	somatic	0	0.420666373614655	0.529712676844569
15	62771013	62786751	2	neutral	AA	100	somatic	0	0.152186927099539	0.219503229257836
15	68355380	68373741	2	neutral	AA	100	somatic	0	0.0818277010045229	0.207714828426152
15	69417695	69459663	2	neutral	AA	27.4921	germline	1	0.934939195463307	0.98724292960272
15	72093155	72095778	0	loss	-	-1	germline	1	0.0832696524514502	0.27004579061224
15	82105146	82705813	2	neutral	AA	19.8631	somatic	0	0.666535947086013	0.729679950457557
15	90023983	90031852	2	neutral	AA	100	somatic	0	0.114106761218809	0.381653709466368
15	96382135	96392627	2	neutral	AA	54.6043	somatic	0	0.929298724929414	0.833406791548211
15	97976919	98005772	2	neutral	AA	70.2665	somatic	0	0.972216605574591	0.817945241121223
16	844606	847229	3	gain	AAB	9.00258	somatic	0	0.0832901994051327	0.270081474634551
16	1728557	1762656	2	neutral	AA	23.9289	germline	1	0.245530914205468	0.425309906233373
16	6722749	6793570	2	neutral	AA	100	somatic	0	0.632940581219799	0.805516720093638
16	21558437	21582044	3	gain	AAB	4.00672	germline	1	2.04601164723721e-07	3.06758716206446e-08
16	22615506	22699442	3	gain	AAB	1.31294	germline	1	2.45376161204376e-21	0
16	23035186	23037809	1	loss	A	-1	somatic	0	0.0839285484947532	0.271188268263457
16	23376176	23449620	2	neutral	AA	14.212	germline	1	0.0193076228160135	0.0152481322308078
16	30022858	30083187	2	neutral	AA	18.1894	somatic	0	0.0895480394991981	0.053340137919372
16	31218946	31336981	2	neutral	AA	15.4841	somatic	0	4.40498698832535e-05	0.000294073404614736
16	34062278	34064901	26	gain	AAAAAAAAAAAAAAAAABBBBBBBBB	11.5969	germline	1	0.0832690104253151	0.270044675541991
16	34075393	34083262	2	neutral	AA	21.8271	germline	1	0.0119227050888539	0.021006297232147
16	34083262	34085885	14	gain	AAAAAAAABBBBBB	64.5007	germline	1	0.0832715785539157	0.270049135843119
16	34085885	34096377	2	neutral	AA	5.16575	germline	1	0.0681248161256311	0.333433529260314
16	34096377	34099000	11	gain	AAAAAAABBBB	2.82169	germline	1	0.0832735046924712	0.270052481104255
16	34099000	34101623	4	gain	AAAB	7.77998	germline	1	0.0832882729537763	0.270078129111253
16	34101623	34161952	2	neutral	AA	13.2699	germline	1	0.133814093288921	0.0929610415144778
16	34161952	34164575	4	gain	AAAB	5.53456	somatic	0	0.0832805675092876	0.270064747320555
16	34164575	34193428	2	neutral	AA	-1	germline	1	NA	NA
16	34193428	34211789	2	neutral	AA	2.05779	germline	1	0.000181840493608248	0.000352463537918846
16	34211789	34214412	4	gain	AAAB	13.5144	somatic	0	0.0832844201593456	0.270071438155405
16	34214412	34219658	2	neutral	AA	-1	germline	1	NA	NA
16	34219658	35179676	2	neutral	AA	0.549795	somatic	0	1.61130772697281e-08	5.31596553505764e-05
16	35924608	36123956	2	neutral	AA	3.82678	somatic	0	9.45266625414837e-06	0.00145125691489489
16	36123956	36126579	5	gain	-	-1	germline	1	0.0832799254149807	0.270063632193177
16	48475663	48478286	1	loss	A	-1	somatic	0	0.0835518894434483	0.270535631084369
16	57690262	57855511	2	neutral	AA	45.4155	somatic	0	0.655075317309311	0.893553830907098
16	60289655	60336869	2	neutral	AA	21.9314	somatic	0	0.689025846949557	0.759414353043848
16	70149512	70162627	4	gain	AABB	2.34112	germline	1	0.000107629373738395	9.08688846962269e-05
16	76505041	76510287	0	loss	-	-1	germline	1	0.0143060809232791	0.0366313577607087
16	88077717	88082963	1	loss	A	-1	germline	1	0.0200204912237555	0.0537107063529467
16	88492151	88531496	2	neutral	AA	18.6581	somatic	0	0.743986198944685	0.754435615543245
16	89040358	89302658	2	neutral	AA	100	somatic	0	0.0146153262331815	0.0642731208929903
17	4335819	4341065	2	neutral	AA	100	somatic	0	0.0347576058157457	0.0653410580283259
17	5261738	5282722	2	neutral	AA	36.3789	somatic	0	0.00146204154544966	0.0036115943969568
17	21290891	21304006	4	gain	AABB	0.273192	germline	1	0.000107621537500794	9.08726683378491e-05
17	21854836	21857459	5	gain	-	-1	germline	1	0.0832792833246839	0.27006251706916
17	21857459	21912542	3	gain	-	-1	somatic	0	7.4546238492304e-14	3.27515792264421e-14
17	21967625	21978117	20	gain	-	-1	germline	1	0.0143077016975117	0.0366344084204434
17	21978117	21991232	9	gain	-	-1	germline	1	0.00270072810481272	0.004958773952076
17	22122382	22159104	6	gain	AAAABB	0.388775	germline	1	4.24666016632623e-10	1.02344799302045e-11
17	26783453	26822798	3	gain	-	-1	somatic	0	4.40231029236629e-08	1.87649490923647e-06
17	26822798	26825421	5	gain	-	-1	somatic	0	0.0832805675092876	0.270064747320555
17	26825421	26864766	3	gain	-	-1	somatic	0	7.19457446335637e-07	3.0540833932946e-06
17	26864766	26867389	7	gain	-	-1	germline	1	0.083276715003599	0.270058056606703
17	26877881	26880504	5	gain	-	-1	germline	1	0.0832792833246839	0.27006251706916
17	26938210	26940833	25	gain	AAAAAAAAAAAAAAAAABBBBBBBB	19.0289	germline	1	0.0832690104253151	0.270044675541991
17	43544423	43570653	2	neutral	AA	36.3786	somatic	0	0.00224428236662626	0.00290744547179855
17	44124106	44158205	2	neutral	AA	22.4381	somatic	0	0.178151348610635	0.175571476828513
17	52798367	52866565	2	neutral	AA	54.5678	somatic	0	0.106686447528532	0.08878628707498
17	55772849	56082363	2	neutral	AA	15.9824	somatic	0	0.647630131869491	0.272416879519232
17	59447672	59455541	3	gain	AAA	78.3973	somatic	0	0.00270934285765661	0.00497782379012845
17	61588040	61598532	2	neutral	AA	100	somatic	0	0.0142103641166861	0.0213743966117202
17	63647095	63841197	2	neutral	AA	100	somatic	0	0.00773742824807252	0.0013634143574367
17	67450445	67481921	2	neutral	AA	54.5678	somatic	0	0.0426678440468022	0.0750177967453681
17	79791660	79836251	2	neutral	AA	18.9442	somatic	0	0.862760952173981	0.8856512363279
17	82585155	82587778	5	gain	AAABB	9.30908	germline	1	0.0832805675092876	0.270064747320555
18	5306329	5308952	1	loss	A	-1	germline	1	0.0833165311913379	0.270127199818024
18	40680107	40687976	1	loss	A	-1	somatic	0	0.00460315270771196	0.00956261098486377
18	41283397	41288643	0	loss	-	-1	germline	1	0.0146842400198948	0.0377725669103907
18	51450145	51452768	1	loss	A	-1	somatic	0	0.118466204064628	0.326648458868003
18	53425264	53430510	1	loss	A	-1	somatic	0	0.0268968296358449	0.0573379289331013
18	53430510	53469855	2	neutral	AA	56.9087	germline	1	0.45195023721656	0.41632006746885
18	54723649	54726272	1	loss	A	-1	somatic	0	0.0967169810270947	0.292668424752865
18	56260727	56263350	1	loss	A	-1	somatic	0	0.107250766131756	0.309482392340644
18	57278451	57281074	1	loss	A	-1	somatic	0	0.083400066810676	0.270272219467149
18	58081089	58094204	2	neutral	AA	36.5429	somatic	0	0.485715393870446	0.827082708451305
18	58290929	58296175	2	neutral	AA	54.5678	somatic	0	0.945083300308319	0.852938392454047
18	59240455	59274554	2	neutral	AA	30.9363	somatic	0	0.810873320576034	0.814141065716102
18	63085773	63109380	2	neutral	AA	24.223	germline	1	0.708699840373218	0.811600785414667
18	64544161	64546784	1	loss	A	-1	somatic	0	0.0972599424855273	0.293552045352353
18	66055009	66065501	1	loss	A	-1	somatic	0	0.00167843547506124	0.00168801411051067
18	67293065	67300934	1	loss	A	-1	germline	1	0.00503360441625939	0.00950864163366183
18	69611797	69648519	2	neutral	AA	43.0505	somatic	0	0.560573384168024	0.782790214616917
18	71371830	71384945	2	neutral	AA	100	somatic	0	0.926165556135593	0.828502096698459
18	79198862	79201485	7	gain	AAAABBB	38.1054	germline	1	0.083277357077855	0.270059171717276
18	79518868	79524114	1	loss	A	-1	somatic	0	0.0296797688442294	0.0568921930218087
18	79862481	79896580	2	neutral	AA	10.5908	germline	1	0.00856546748709914	0.033942372444404
19	2759396	2811856	2	neutral	AA	17.6829	somatic	0	0.129784329154623	0.13178920499279
19	2887923	2940383	2	neutral	AA	73.4829	somatic	0	0.00396194778614363	0.000179854921399381
19	5862405	5891258	2	neutral	AA	27.11	somatic	0	0.105229258418649	0.19020984419538
19	6373890	6397497	2	neutral	AA	36.3786	somatic	0	0.0635428879726632	0.0320129613166226
19	7449320	7451943	8	gain	AAAAABBB	3.70758	germline	1	0.083276715003599	0.270058056606703
19	8881478	8952299	2	neutral	AA	0.639844	germline	1	0.239928942750098	0.247526352995355
19	12792371	12800240	2	neutral	AA	36.3786	germline	1	0.134657580668825	0.326846814549505
19	13852063	13859932	2	neutral	AA	54.5678	germline	1	0.737207931517137	0.740556763690673
19	14368794	14379286	2	neutral	AA	27.2839	somatic	0	0.532742181641956	0.660750147948996
19	16147188	16246862	2	neutral	AA	10.3433	somatic	0	0.000283825872515301	0.00203899680253394
19	21482370	21566306	2	neutral	AA	8.99882	somatic	0	0.13702160608634	0.10551752429869
19	21568929	21574175	4	gain	AABB	3.09477	germline	1	0.0143128689964432	0.0366423411760813
19	21574175	21592536	2	neutral	AA	13.0307	somatic	0	0.00861983763417927	0.0572937938728293
19	24330948	24404392	4	gain	AABB	0.366082	germline	1	4.73375003640618e-18	0
19	27242478	27323791	2	neutral	AA	0.977408	germline	1	0.048953384189639	0.117000700891563
19	27336906	27342152	3	gain	AAB	1.83558	germline	1	0.0143137810435922	0.0366429514502996
19	27342152	27344775	2	neutral	AA	23.2752	germline	1	0.915533398769911	0.940960592424715
19	27344775	27347398	4	gain	AAAB	12.9223	germline	1	0.0832805675092876	0.270064747320555
19	27347398	27378874	6	gain	AAAABB	0.143595	germline	1	9.23221408602617e-09	5.58596724431482e-10
19	27378874	27384120	4	gain	AAAB	7.73444	germline	1	0.0143117543417674	0.0366411206543228
19	27384120	27399858	6	gain	AAAABB	0.242274	germline	1	2.21115252405326e-05	1.2296716605964e-05
19	29511373	29513996	0	loss	-	-1	somatic	0	0.0832722205960909	0.270050250926811
19	30796643	30799266	0	loss	-	-1	somatic	0	0.0832741467466766	0.270053596198031
19	33760633	33765879	2	neutral	AA	36.3786	somatic	0	0.293722773548007	0.465331899775803
19	36349534	36357403	1	loss	A	-1	somatic	0	0.00563115116931174	0.0095417774988642
19	37306929	37343651	2	neutral	AA	36.3786	somatic	0	0.454081010249981	0.28276610680761
19	38269570	38468918	2	neutral	AA	8.74406	somatic	0	0.00920615381018769	0.0249475699718691
19	38954173	38967288	2	neutral	AA	54.5678	somatic	0	0.0488592209258826	0.102842811921718
19	40221082	40357478	2	neutral	AA	100	somatic	0	0.00512372831995733	0.000151186106526202
19	44653952	44871661	2	neutral	AA	16.498	somatic	0	1.39506182543651e-06	5.34712345989785e-06
19	46904486	47017275	2	neutral	AA	22.605	somatic	0	0.093303231823894	0.110853722997379
19	47717616	47770076	2	neutral	AA	65.0278	somatic	0	0.00578574646415755	0.00286499832381759
19	50652753	50694721	2	neutral	AA	33.1427	somatic	0	0.000879754405957654	0.0017428606258848
19	52719677	52735415	2	neutral	AA	28.8133	somatic	0	0.595136851420472	0.925922328028371
19	56255481	56321056	2	neutral	AA	29.4468	somatic	0	0.41703287056877	0.197648565832894
20	60329	62952	8	gain	-	-1	germline	1	0.083276715003599	0.270058056606703
20	65575	68198	3	gain	-	-1	germline	1	0.0832895572506701	0.270080359456757
20	12716304	12726796	2	neutral	AA	100	somatic	0	0.808281978584925	0.735094256674031
20	17080976	17096714	2	neutral	AA	100	somatic	0	0.604906794199243	0.693130581950119
20	25862780	28763818	2	neutral	AA	17.8118	somatic	0	0.0857845420848714	0.212025742356156
20	28784802	28787425	9	gain	-	-1	germline	1	0.0832754308671176	0.270055826395641
20	28803163	29262188	9	gain	-	-1	somatic	0	7.35837898316734e-11	6.70451583140164e-10
20	29262188	29264811	22	gain	-	-1	germline	1	0.0832690104253151	0.270044675541991
20	29264811	29860232	3	gain	-	-1	somatic	0	1.82857923662628e-18	0
20	29875970	29894331	7	gain	-	-1	germline	1	0.00270104193650206	0.00495933146422223
20	30938285	30943531	6	gain	-	-1	germline	1	0.0143105384421814	0.0366380695055438
20	31066812	31074681	35	gain	-	-1	germline	1	0.0143069925888551	0.0366331881298754
20	31161240	31166486	3	gain	-	-1	somatic	0	0.0147757548398135	0.038021768365463
20	31166486	31169109	5	gain	-	-1	somatic	0	0.0832805675092876	0.270064747320555
20	31184847	31187470	26	gain	-	-1	germline	1	0.0832690104253151	0.270044675541991
20	31187470	31190093	4	gain	-	-1	germline	1	0.0832824938162702	0.270068092722855
20	31239930	31242553	51	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	31.4971	germline	1	0.0832670843709692	0.270041330351436
20	31242553	31245176	3	gain	AAA	4.83579	germline	1	0.0832959789757709	0.270091511385945
20	35022296	35190168	2	neutral	AA	40.2454	germline	1	3.40126771892205e-09	1.5978363077096e-10
20	38788924	38812531	2	neutral	AA	54.62	somatic	0	0.737659537824502	0.455923767370942
20	56814180	56869263	2	neutral	AA	100	somatic	0	0.0471023809627385	0.153344558641441
20	59426688	59434557	2	neutral	AA	100	somatic	0	0.554939348662712	0.913593789720054
20	62301496	62314611	2	neutral	AA	98.8374	somatic	0	0.886341494772524	0.849980789130035
20	63479223	63494961	2	neutral	AA	9.03281	somatic	0	0.530644836675781	0.873396651740884
21	0	8989021	6	gain	AAAABB	-1	somatic	0	0.000107586637163809	9.08461859887577e-05
21	8989021	10738562	6	gain	AAAABB	0.166995	somatic	0	2.89111489230076e-27	0
21	10751677	10754300	16	gain	AAAAAAAAAABBBBBB	13.9051	germline	1	0.0832709365157505	0.270048020762795
21	20170870	20186608	2	neutral	AA	27.7642	somatic	0	0.624186014062801	0.95051187892664
21	24483082	24493574	2	neutral	AA	54.568	somatic	0	0.948293000080691	0.970228189432132
21	31911418	31948140	2	neutral	AA	27.284	germline	1	0.91550806715323	0.970132190416984
21	33868176	33878668	2	neutral	AA	54.5681	somatic	0	0.776019355573659	0.806056251534837
21	37165287	37170533	2	neutral	AA	54.5678	somatic	0	0.656484490968664	0.954495987513755
21	39544348	39567955	2	neutral	AA	55.3679	germline	1	0.0366869146211391	0.0544312446878139
21	40436168	40449283	2	neutral	AA	36.4022	somatic	0	0.225038010353619	0.322875660001923
21	42049313	42101773	2	neutral	AA	27.2874	somatic	0	0.0477107865670973	0.186117325763188
21	42715555	42720801	1	loss	A	-1	somatic	0	0.0251808031505206	0.0568953215665888
21	43334583	43355567	2	neutral	AA	3.75962	germline	1	0.00026057267210128	0.00108787327354254
21	43583768	43693934	2	neutral	AA	14.6156	somatic	0	0.183296202580847	0.26343711578234
21	45577248	45608724	2	neutral	AA	17.1506	somatic	0	0.776594413139171	0.815835086828943
21	46083487	46107094	2	neutral	AA	4.08907	germline	1	0.0106031199579729	0.0209304470928077
22	15934725	15937348	3	gain	-	-1	somatic	0	0.0832921258925836	0.270084820188099
22	17875745	18035748	2	neutral	AA	1.98127	somatic	0	0.896325603081884	0.86010575857283
22	18730843	18733466	1	loss	A	-1	somatic	0	0.0834881739049352	0.270425109345832
22	19242328	19328887	2	neutral	AA	100	germline	1	0.00188064840262937	0.000615537536519439
22	21983363	21985986	2	neutral	AA	100	somatic	0	0.82782147914625	0.909409135042401
22	22347960	22355829	2	neutral	AA	0.88503	somatic	0	0.0530370561531221	0.184700401335319
22	22901413	22904036	4	gain	AAAB	29.2579	germline	1	0.0832831359266183	0.270069207863677
22	23751265	23759134	2	neutral	AA	54.5678	somatic	0	0.189325688047481	0.215216624557263
22	26835913	26841159	2	neutral	AA	47.0676	germline	1	0.785262106722381	0.919444991108989
22	29487766	29582194	2	neutral	AA	12.5819	somatic	0	0.00955266540582839	0.00639775736976012
22	31575674	31596658	2	neutral	AA	54.5678	somatic	0	0.0535851330550454	0.170455257263954
22	32236670	32241916	2	neutral	AA	100	somatic	0	0.336936675678238	0.814718926459375
22	36745607	36753476	1	loss	A	-1	somatic	0	0.00765730568295002	0.0105694034705728
22	40638139	40648631	2	neutral	AA	54.5678	somatic	0	0.653953338792548	0.78369328244945
22	44564770	44575262	2	neutral	AA	36.3786	somatic	0	0.38230890173028	0.474764870660731
22	46621202	46629071	2	neutral	AA	39.7899	germline	1	0.537999169695983	0.454569735788081
22	47208754	47221869	2	neutral	AA	21.8271	somatic	0	0.112247136421713	0.156380328270247
22	47374003	47381872	2	neutral	AA	7.08514	somatic	0	0.256457901455138	0.421481730469615
22	47746469	47770076	2	neutral	AA	36.3987	somatic	0	0.995681801265281	0.592575157509561
22	49110429	49126167	2	neutral	AA	23.7382	somatic	0	0.864886232102987	0.926404776069115
X	19446922	19452168	0	loss	-	-1	germline	1	0.0143062835112006	0.03663166281668
X	78267697	78270320	3	gain	-	-1	germline	1	0.0834772368127483	0.270406134180195
X	79665756	79671002	0	loss	-	-1	germline	1	0.0143062835112006	0.03663166281668
X	125271857	125282349	0	loss	-	-1	germline	1	0.0143387301919069	0.0367293949586015
X	141788888	141794134	0	loss	-	-1	somatic	0	0.0143347722823511	0.036717471659896
X	155688165	155693411	0	loss	-	-1	somatic	0	0.0143079043056794	0.0366368491082791
Y	3845318	3853187	2	gain	AB	0.711837	somatic	0	0.0585066196071935	0.106567864348351
Y	10623150	10662495	2	gain	AB	29.4025	somatic	0	0.00104788096663365	0.00322590404577239
Y	10686102	10688725	4	gain	-	-1	germline	1	0.0832857044081142	0.270073668460576
Y	10746431	10749054	5	gain	-	-1	germline	1	0.0832792833246839	0.27006251706916
Y	10749054	10754300	2	gain	-	-1	germline	1	0.0168368004353668	0.0437745498606124
Y	10754300	10756923	5	gain	-	-1	germline	1	0.0832805675092876	0.270064747320555
Y	10756923	10759546	2	gain	-	-1	germline	1	0.384742870699582	0.625642388573045
Y	10759546	10764792	6	gain	-	-1	germline	1	0.0143102344815234	0.036638374610418
Y	10764792	10767415	2	gain	-	-1	germline	1	0.126984713179931	0.339240376843663
Y	10767415	10772661	3	gain	-	-1	germline	1	0.0143138823853288	0.0366432565907435
Y	10772661	10775284	2	gain	-	-1	germline	1	0.195389672925612	0.429941802230496
Y	10775284	10777907	5	gain	-	-1	germline	1	0.0832792833246839	0.27006251706916
Y	10777907	10793645	2	gain	-	-1	germline	1	0.173794207462827	0.183485710478982
Y	10793645	10798891	4	gain	-	-1	germline	1	0.0143120583309028	0.036642036042307
Y	10798891	10804137	3	gain	-	-1	germline	1	0.0143173283809832	0.0366484443184546
Y	10804137	10806760	2	gain	-	-1	germline	1	0.269312533511234	0.513752842191594
Y	10806760	10809383	4	gain	-	-1	germline	1	0.0832824938162702	0.270068092722855
Y	10819875	10827744	3	gain	-	-1	germline	1	0.22839728392405	0.139015081434618
Y	10827744	10895942	2	gain	-	-1	germline	1	0.0605836179429413	0.000285253051697243
Y	10924795	10927418	5	gain	-	-1	germline	1	0.0832792833246839	0.27006251706916
Y	10927418	10935287	2	gain	-	-1	germline	1	0.527157276472537	0.354590388289582
Y	10935287	10937910	5	gain	-	-1	germline	1	0.0832805675092876	0.270064747320555
Y	10937910	10985124	2	gain	-	-1	germline	1	0.705893220617586	0.22539295332159
Y	10985124	10990370	9	gain	-	-1	germline	1	0.0143096265772929	0.0366380695055438
Y	10990370	10998239	2	gain	-	-1	germline	1	0.808953544671852	0.719893164052972
Y	10998239	11000862	7	gain	-	-1	germline	1	0.083277357077855	0.270059171717276
Y	11003485	11006108	3	gain	-	-1	germline	1	0.0833242393311009	0.270140583867388
Y	11013977	11016600	17	gain	-	-1	germline	1	0.0832702944815954	0.270046905685833
Y	11016600	11040207	2	gain	AB	17.9786	germline	1	0.296312666338682	0.614482901303357
Y	11292015	11307753	27	gain	AAAAAAAAAAAAAAAAAABBBBBBBBB	3.38999	germline	1	2.20973106789384e-05	1.22918022399388e-05
Y	11307753	11333983	14	gain	AAAAAAAAABBBBB	0.874587	germline	1	2.21028214150015e-05	1.22961022073209e-05
Y	11685465	11688088	3	gain	AAB	16.9803	germline	1	0.0833415847576097	0.270170699748148
Y	11688088	11690711	6	gain	AAAABB	23.2814	germline	1	0.083277357077855	0.270059171717276
Y	11716941	11719564	3	gain	AAA	100	germline	1	0.0832895572506701	0.270080359456757
Y	11719564	11724810	21	gain	AAAAAAAAAAAAAABBBBBBB	100	germline	1	0.0143077016975117	0.0366344084204434
Y	11724810	11743171	2	gain	AA	9.58726	germline	1	0.0897335618429524	0.0899681483269851
Y	11743171	11745794	3	gain	AAB	9.12247	germline	1	0.0833030433366134	0.270103778896259
Y	11745794	11748417	8	gain	AAAAABBB	28.2966	germline	1	0.0832760729333532	0.270056941499491
