chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5670645	5676555	4	gain	AABB	1.0391	germline	1	0.0143121931141546	0.0366421168312625
1	16610055	16636650	9	gain	AAAAAABBB	15.1634	germline	1	0.000532205573615259	0.000671115241408948
1	16722345	16725300	4	gain	AABB	22.8601	germline	1	0.0832805238847742	0.270064597214943
1	16881915	16943970	3	gain	AAB	1.22421	germline	1	4.33835151927705e-08	4.13867895510123e-09
1	16949880	16952835	2	neutral	AA	100	somatic	0	0.373265233244331	0.615354621733508
1	35477730	35590020	2	neutral	AA	21.8896	somatic	0	0.6527875092948	0.532234587213452
1	37218225	37227090	2	neutral	AA	100	somatic	0	0.15268425605902	0.349446924781152
1	37785585	37891965	2	neutral	AA	100	germline	1	0.0359303687062737	0.00918471096203577
1	40554420	40563285	1	loss	A	-1	somatic	0	0.0055695531216091	0.00965035651494883
1	40882425	40914930	3	gain	AAB	2.58292	germline	1	9.27259127327863e-09	5.62035196161048e-10
1	50243865	50267505	2	neutral	AA	100	somatic	0	0.0255929815384619	0.0918086330962067
1	52980195	53101350	2	neutral	AA	76.8127	somatic	0	0.0323969553984059	0.098693755453643
1	54020355	54029220	1	loss	A	-1	somatic	0	0.00384339632329721	0.00667949951848978
1	55660380	55669245	1	loss	A	-1	somatic	0	0.00551215192753806	0.00963413881631292
1	62566215	62580990	2	neutral	AA	100	somatic	0	0.145772933505596	0.162438437259297
1	62625315	62716920	2	neutral	AA	28.6907	somatic	0	0.54251553647826	0.806374177008239
1	64862250	65030685	2	neutral	AA	36.3795	somatic	0	0.799194185959837	0.487532799238872
1	66883470	66895290	2	neutral	AA	36.3793	somatic	0	0.470015083050066	0.447643276230535
1	78153840	78257265	2	neutral	AA	100	somatic	0	0.11148186331809	0.232552009801171
1	81747120	81850545	2	neutral	AA	54.3587	somatic	0	0.209396904047225	0.236846354926412
1	88794795	88809570	2	neutral	AA	100	somatic	0	0.373986699390521	0.407041164940842
1	93203655	93230250	2	neutral	AA	100	somatic	0	0.284202539689159	0.612625286807941
1	97872555	97916880	2	neutral	AA	100	somatic	0	0.0819910591995523	0.0980136467525609
1	103362945	103365900	0	loss	-	-1	somatic	0	0.0832659715004687	0.270039323152404
1	103386585	103401360	2	neutral	AA	100	somatic	0	0.127928411129911	0.209969329234549
1	103560930	103617075	3	gain	AAB	9.8581	germline	1	9.270431333791e-09	5.61306445767684e-10
1	105472815	105481680	1	loss	A	-1	somatic	0	0.00473784221612944	0.0096315668511453
1	108823785	108829695	1	loss	A	-1	somatic	0	0.0258930730826102	0.0553393691557623
1	112148160	112154070	1	loss	A	-1	somatic	0	0.0227685263365899	0.0547995910982194
1	124943310	124975815	3	gain	-	-1	germline	1	9.8870455088391e-07	2.46763444788911e-07
1	125067420	125073330	3	gain	-	-1	somatic	0	0.0151088725760611	0.0390174552890177
1	125079240	125082195	10	gain	-	-1	germline	1	0.0832696094034153	0.270045641506175
1	125082195	125085150	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
1	125161980	125164935	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
1	148352820	150013530	2	neutral	AA	100	somatic	0	0.823438816213651	0.649443347335783
1	151603320	151733340	2	neutral	AA	21.8271	somatic	0	0.00315905751348414	0.00198289960119213
1	151733340	151751070	2	neutral	AA	54.5678	germline	1	0.190029194772526	0.160106494358353
1	152315475	152480955	2	neutral	AA	32.3211	somatic	0	0.00795090215362891	0.0442048884451481
1	154268730	154369200	2	neutral	AA	24.1974	somatic	0	0.0285883511781517	0.0230286164254987
1	158896260	158902170	1	loss	A	-1	somatic	0	0.0207774214664274	0.0563436956169847
1	170335065	170349840	2	neutral	AA	68.2402	somatic	0	0.324938386304742	0.485177160229029
1	187494750	187497705	1	loss	A	-1	somatic	0	0.0833030841519185	0.270103775424153
1	187745925	187754790	1	loss	A	-1	somatic	0	0.00605762831442964	0.00945509111264964
1	196770495	196826640	1	loss	A	-1	germline	1	0.000260303117290901	0.000215072612873235
1	200307630	200479020	2	neutral	AA	15.6025	somatic	0	0.000140589070505311	0.000453347615108068
1	213413055	213602175	2	neutral	AA	14.9419	somatic	0	0.0497891986181649	0.0131310904750006
1	214004055	214098615	2	neutral	AA	36.7139	somatic	0	0.0494657986151891	0.0482947862724376
1	214479810	214686660	2	neutral	AA	6.50028	somatic	0	0.175224599370337	0.500030006085918
1	224012640	224015595	7	gain	AAAAAAA	1.19298	germline	1	0.0832747026838432	0.270054487382735
1	228066900	228072810	1	loss	A	-1	somatic	0	0.0147798641832313	0.0379883654718921
1	228844065	228906120	2	neutral	AA	54.5678	somatic	0	0.101853684373612	0.041501475576096
1	229101150	229107060	3	gain	AAB	4.91285	somatic	0	0.0143170169575867	0.0366500709765397
1	229674420	229686240	1	loss	A	-1	germline	1	0.0207234195047491	0.0564286372610366
1	234774750	234777705	4	gain	AAAA	100	germline	1	0.0832812515580672	0.270065860963393
1	234777705	234783615	6	gain	AAAABB	7.6942	germline	1	0.0143105854849767	0.0366383132087704
1	236095635	236098590	6	gain	AAAABB	18.0023	germline	1	0.0832790685536395	0.270062069730991
1	236532975	238341435	2	neutral	AA	3.70149	germline	1	0.129797859323749	0.0231641333757473
2	3179580	3182535	8	gain	-	-1	germline	1	0.0832747026838432	0.270054487382735
2	16146120	16149075	0	loss	-	-1	somatic	0	0.0832666990707581	0.270040586814523
2	18294405	18297360	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
2	35752545	35767320	1	loss	A	-1	germline	1	0.000290181923567415	0.000231432159537359
2	59395500	59404365	1	loss	A	-1	somatic	0	0.00454930670733161	0.00811613459164828
2	89772900	89790630	4	gain	-	-1	germline	1	0.00010760315533947	9.08523617834112e-05
2	89796540	89814270	4	gain	-	-1	germline	1	0.000107607191258742	9.08545053455168e-05
2	89817225	89823135	4	gain	-	-1	germline	1	0.0143111596199675	0.0366390047508002
2	89826090	89840865	24	gain	-	-1	germline	1	0.000107517627453448	9.08052155703665e-05
2	89840865	89843820	9	gain	-	-1	germline	1	0.0832725198184732	0.270050696266881
2	89843820	89849730	4	gain	-	-1	germline	1	0.0143112744494039	0.0366393505260976
2	91409970	91415880	4	gain	-	-1	germline	1	0.014312078278216	0.0366421168312625
2	109199070	109202025	13	gain	-	-1	germline	1	0.0832674266461974	0.27004185048097
2	117041640	117044595	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
2	122718195	122727060	1	loss	A	-1	somatic	0	0.00753845304436552	0.00991995978149474
2	125685015	125696835	1	loss	A	-1	germline	1	0.0251079672003934	0.0705618617759077
2	128882325	128888235	1	loss	A	-1	somatic	0	0.0260287103460573	0.0541438652481704
2	132242160	132245115	4	gain	-	-1	somatic	0	0.0832819792365107	0.270067124716161
2	146104065	146118840	1	loss	A	-1	germline	1	0.00035195026017877	0.000263056003007689
2	169463340	169469250	1	loss	A	-1	germline	1	0.0201924245458769	0.0548049859826221
2	176398725	176407590	1	loss	A	-1	germline	1	0.020783473495345	0.0566916968608412
2	193824360	193827315	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
2	207485325	207494190	1	loss	A	-1	somatic	0	0.00453544008226664	0.00946293366670692
2	226211160	226240710	1	loss	A	-1	germline	1	2.98913095921327e-07	3.28361026147306e-08
2	239086095	239092005	2	neutral	AA	36.3801	somatic	0	0.194310793028773	0.602157382175208
2	239142240	239151105	2	neutral	AA	20.2577	somatic	0	0.0352258843423531	0.0516722012935276
2	239733240	239736195	2	neutral	AA	100	somatic	0	0.115498527910878	0.322185912627248
2	240572460	240575415	2	neutral	AA	100	somatic	0	0.117915724372575	0.325821388389818
2	241588980	241591935	4	gain	AAAB	17.92	germline	1	0.0832805238847742	0.270064597214943
3	1740495	1746405	1	loss	A	-1	somatic	0	0.0247807698651171	0.0524589000051775
3	4609800	4704360	2	neutral	AA	21.8272	somatic	0	0.115939044643327	0.312720396146215
3	13897365	14006700	2	neutral	AA	35.1045	somatic	0	0.108144891283526	0.234641700906707
3	34703520	34706475	1	loss	A	-1	somatic	0	0.0833103627134028	0.270116414441084
3	36958185	37416210	2	neutral	AA	100	somatic	0	0.503946855016745	0.584572399019399
3	50633925	50746215	2	neutral	AA	26.7636	somatic	0	0.257903010106012	0.528808069355699
3	51417000	51632715	2	neutral	AA	34.75	somatic	0	8.06602226649019e-10	2.1292204666068e-09
3	56931030	57031500	2	neutral	AA	72.1171	germline	1	0.620680216674043	0.219854963947234
3	68585550	68591460	1	loss	A	-1	germline	1	0.0197736983706139	0.051808245812683
3	68691930	68697840	1	loss	A	-1	germline	1	0.0195530301946105	0.0460174630248695
3	72964860	73006230	2	neutral	AA	54.5678	somatic	0	0.180833252663045	0.104332626037197
3	75724830	75769155	3	gain	AAB	0.408113	germline	1	1.64865141921464e-05	2.82031497436108e-05
3	76035105	76046925	1	loss	A	-1	germline	1	0.0014884547445848	0.00151898752636448
3	80012535	80015490	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
3	96619635	96622590	1	loss	A	-1	germline	1	0.0832987172622854	0.270096192221197
3	99178665	99184575	1	loss	A	-1	germline	1	0.018857595901881	0.050463823644834
3	102059790	102083430	2	neutral	AA	54.5678	somatic	0	0.794189437188075	0.480813069410836
3	131988030	131996895	1	loss	A	-1	somatic	0	0.0104939012786294	0.0214431792555796
3	133412340	133418250	1	loss	A	-1	somatic	0	0.0287530441765731	0.0568818328111734
3	139112535	139118445	1	loss	A	-1	somatic	0	0.0284192047364895	0.0563331484203019
3	145501245	145539660	1	loss	A	-1	germline	1	5.0516210255052e-09	1.70210845418239e-10
3	152953755	153281760	2	neutral	AA	31.2816	somatic	0	0.00154751877641443	0.00105470958870713
3	155855565	155899890	2	neutral	AA	100	somatic	0	0.00363289286033066	0.0190020467618133
3	155899890	155991495	2	neutral	AA	68.6143	somatic	0	0.216977898035351	0.238453636748115
3	162808680	162826410	1	loss	A	-1	germline	1	7.85584139005859e-05	3.94718798040206e-05
3	163095315	163189875	2	neutral	AA	100	somatic	0	0.0666164925418305	0.215440086177631
3	181841835	181954125	2	neutral	AA	54.8553	germline	1	9.31819689152326e-06	1.53306864194569e-05
3	193156530	193168350	1	loss	A	-1	germline	1	0.014313686055322	0.0366473041459807
3	196693665	196897560	2	neutral	AA	10.0519	somatic	0	0.000533666358658657	0.000740222856649875
3	196897560	196944840	2	neutral	AA	24.0121	somatic	0	0.138317526324283	0.326047467692722
3	197382180	197388090	3	gain	AAB	3.89933	somatic	0	0.0143327618458533	0.0366919415815551
4	94560	1672530	2	neutral	AA	3.6915	somatic	0	7.99860863523784e-07	0.000317677362490776
4	6273465	7544115	2	neutral	AA	14.5648	somatic	0	5.05244518887774e-08	1.65136712304559e-07
4	10209525	10233165	1	loss	A	-1	germline	1	3.81869256767332e-06	1.25561417141373e-06
4	10389780	10401600	1	loss	A	-1	germline	1	0.00122158848205618	0.00159094545180727
4	12712410	12718320	1	loss	A	-1	somatic	0	0.037732191351825	0.112417203817494
4	16140210	16350015	2	neutral	AA	36.3786	somatic	0	0.00990109573328605	0.00640973828522073
4	17248335	17348805	2	neutral	AA	54.5678	somatic	0	0.508082004829502	0.542850183191075
4	19627110	19724625	2	neutral	AA	100	somatic	0	0.738700619312614	0.655565883291876
4	22777140	22818510	2	neutral	AA	72.5771	somatic	0	0.726896199267554	0.992599287997006
4	24467400	24496950	2	neutral	AA	21.8571	somatic	0	0.815625262519467	0.525175756909814
4	27212595	27236235	2	neutral	AA	100	somatic	0	0.61273927376858	0.479075688522694
4	30442410	30956580	2	neutral	AA	25.1788	somatic	0	0.266134072457181	0.117948586814608
4	31795800	31813530	2	neutral	AA	100	somatic	0	0.817669445640834	0.853572625904027
4	31813530	31819440	1	loss	A	-1	germline	1	0.0165220529907986	0.0433757667823573
4	32830050	32841870	1	loss	A	-1	somatic	0	0.0233868433114072	0.0544484396373281
4	36695190	36993645	2	neutral	AA	100	somatic	0	0.627941892644478	0.697829580904426
4	37824000	37850595	1	loss	A	-1	germline	1	6.18326418476174e-07	1.22041827643748e-07
4	40294380	40297335	4	gain	AAAA	35.6957	germline	1	0.0832812515580672	0.270065860963393
4	42758850	42767715	1	loss	A	-1	germline	1	0.0199087666709939	0.053926313258384
4	43373490	43450320	2	neutral	AA	26.7379	somatic	0	0.971575457633943	0.95213648312452
4	43450320	43453275	1	loss	A	-1	germline	1	0.0832979894653752	0.270094928369146
4	43453275	43479870	2	neutral	AA	60.3352	somatic	0	0.17665317498776	0.25294911656343
4	43541925	43562610	2	neutral	AA	100	somatic	0	0.291984145512532	0.759724842509285
4	46198470	46204380	1	loss	A	-1	somatic	0	0.0212366641425737	0.0566891721419078
4	49088460	49091415	4	gain	AABB	37.9466	germline	1	0.0832834346088489	0.270069652234645
4	49147560	49156425	70	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBB	59.8578	germline	1	0.0143061079293215	0.0366313984165538
4	49652865	49655820	14	gain	AAAAAAAAAABBBB	9.2854	germline	1	0.0832652439353293	0.270038059494613
4	60308595	60323370	2	neutral	AA	54.5678	somatic	0	0.612801757299356	0.880991814074098
4	61070985	61076895	1	loss	A	-1	germline	1	0.0206431606123325	0.0562468257248006
4	66785955	66827325	2	neutral	AA	54.6167	germline	1	0.417692862122407	0.840219967000192
4	66913020	66942570	2	neutral	AA	100	somatic	0	0.963777558184774	0.82726116393142
4	67628130	67645860	2	neutral	AA	36.3789	somatic	0	0.503161944744094	0.559504308034982
4	69265200	69365670	1	loss	A	-1	somatic	0	8.69342253678085e-06	1.07834398155315e-05
4	70618590	70624500	1	loss	A	-1	germline	1	0.0188630835239415	0.0500469161245412
4	73928190	73963650	2	neutral	AA	100	somatic	0	0.00454829803953398	0.0208492563803624
4	74560560	74563515	1	loss	A	-1	germline	1	0.0833198256134715	0.27013284580845
4	75588900	76041015	2	neutral	AA	12.619	somatic	0	7.67907428943708e-05	0.000365555811852936
4	78118380	78162705	2	neutral	AA	18.1902	somatic	0	0.555095463242497	0.293673917734294
4	87057255	87066120	2	neutral	AA	100	somatic	0	0.838638230813613	0.806447739496722
4	96386190	96406875	2	neutral	AA	54.5678	somatic	0	0.959462164479157	0.769910357929251
4	108008205	108017070	2	neutral	AA	100	somatic	0	0.469187103239148	0.455688068665632
4	110233320	110239230	2	neutral	AA	54.5678	germline	1	0.0355382439744891	0.0658686190009979
4	114252120	114260985	1	loss	A	-1	germline	1	0.0050506977866882	0.00967731186358001
4	130407105	130436655	2	neutral	AA	54.5755	somatic	0	0.11018993581343	0.12764048378526
4	132259890	132262845	1	loss	A	-1	germline	1	0.0833081790908688	0.270112622690679
4	138512670	138574725	2	neutral	AA	100	somatic	0	0.128294177173276	0.439746960171341
4	139091850	139189365	2	neutral	AA	11.4127	somatic	0	0.00164301167796524	0.000601492653748759
4	142005480	142055715	2	neutral	AA	21.0796	somatic	0	0.0553251912707372	0.0132870289181841
4	148846305	148926090	2	neutral	AA	27.3883	somatic	0	0.45018111382388	0.922604248075733
4	155583705	155592570	2	neutral	AA	54.5678	somatic	0	0.40857190481395	0.636150034998449
4	156245625	156301770	2	neutral	AA	100	somatic	0	0.875162435360791	0.529759095948028
4	160958850	160964760	1	loss	A	-1	somatic	0	0.0219274527684117	0.056044014952682
4	164942190	164962875	3	gain	AAB	7.27921	germline	1	4.61209720750196e-06	1.67261489347759e-06
4	169212165	169218075	2	neutral	AA	100	somatic	0	0.838861426361386	0.709481380229212
4	170340975	170408940	2	neutral	AA	100	somatic	0	0.514265796518034	0.640617488375894
4	171289530	171304305	2	neutral	AA	36.3787	somatic	0	0.416515602148558	0.710150339034362
4	171452055	171457965	1	loss	A	-1	somatic	0	0.0225443640375583	0.0561240624606237
4	172509945	172512900	0	loss	-	-1	germline	1	0.083268881812526	0.270044377826779
4	173239830	173434860	2	neutral	AA	53.3565	somatic	0	0.53399029504815	0.529314347468426
4	173482140	173485095	1	loss	A	-1	somatic	0	0.0834290759153445	0.270322491283384
4	175860915	176144595	2	neutral	AA	21.7011	somatic	0	0.512486710409218	0.386390242380317
4	176469645	176519880	2	neutral	AA	54.5678	somatic	0	0.428449373375811	0.868395500901049
4	177122700	177155205	1	loss	A	-1	germline	1	1.03236930147996e-07	5.81671621979751e-09
4	179129145	179138010	2	neutral	AA	54.5678	somatic	0	0.621759932670516	0.403168159694027
4	180308190	180343650	2	neutral	AA	36.3801	somatic	0	0.304129178953778	0.432514198487657
4	183017925	183047475	2	neutral	AA	65.0231	somatic	0	0.750482189551025	0.779629052436552
4	185071650	185110065	2	neutral	AA	100	somatic	0	0.093917420169358	0.116428979667367
4	185680380	185706975	2	neutral	AA	100	somatic	0	0.340734288842313	0.540580006325751
4	189270705	189279570	1	loss	A	-1	germline	1	0.00494873042416075	0.00901998979063856
5	626460	629415	4	gain	-	-1	germline	1	0.0832819792365107	0.270067124716161
5	756480	762390	3	gain	-	-1	germline	1	0.0143163277493012	0.0366507627127353
5	12809925	12821745	1	loss	A	-1	germline	1	0.00152372354530405	0.00162378898556892
5	32106075	32168130	3	gain	-	-1	germline	1	9.60839791576078e-15	0
5	45371070	45376980	1	loss	A	-1	germline	1	0.0147814000549916	0.0380444322067611
5	46269390	46275300	1	loss	A	-1	germline	1	0.0213403542956989	0.055859281029741
5	46405320	46431915	1	loss	A	-1	somatic	0	0.000206951400770085	0.000708212847337131
5	49599675	49602630	207	gain	-	-1	germline	1	0.0832652439353293	0.270038059494613
5	58027335	58039155	0	loss	-	-1	germline	1	0.0144934910008495	0.0371959105880357
5	60704565	60710475	1	loss	A	-1	germline	1	0.0223767603518175	0.0575275926182706
5	84651885	84660750	1	loss	A	-1	germline	1	0.0189734238382981	0.0509859487215746
5	86918370	86921325	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
5	118052250	118058160	1	loss	A	-1	germline	1	0.0272939743992316	0.0555881268957593
5	125614095	125617050	0	loss	-	-1	germline	1	0.0832717922069836	0.270049432570219
5	135779295	135785205	1	loss	A	-1	somatic	0	0.0193412468747282	0.0490983293272669
5	142191645	142221195	2	neutral	AA	36.7089	somatic	0	0.233405676887974	0.16227869475471
5	145959270	145965180	2	neutral	AA	54.5678	somatic	0	0.818167821009031	0.984334458285221
5	148169610	148175520	1	loss	A	-1	germline	1	0.0390735005976605	0.116927422861239
5	150823200	150843885	1	loss	A	-1	germline	1	1.72598975987227e-05	7.46209916369089e-06
5	152693715	152702580	1	loss	A	-1	somatic	0	0.480629424132683	0.704180139129793
5	154443075	154448985	2	neutral	AA	54.5678	somatic	0	0.144541750282313	0.216861659400071
5	160252605	160379670	2	neutral	AA	21.8301	somatic	0	0.0438548821491558	0.123736394003074
5	171514110	171549570	2	neutral	AA	82.6319	somatic	0	0.471804075578283	0.726998152462757
5	172802490	172852725	2	neutral	AA	100	somatic	0	0.894488319105166	0.946292617872363
5	177530490	177568905	2	neutral	AA	36.3842	somatic	0	0.176706931895285	0.120603510878094
5	178216050	178239690	2	neutral	AA	21.8271	somatic	0	0.567192683330271	0.794670238625412
5	178585425	178588380	6	gain	AAAABB	7.48481	germline	1	0.083276885595565	0.270058278537438
5	179362590	179415780	2	neutral	AA	31.454	germline	1	0.143132261953092	0.311224714003604
5	179545800	179596035	2	neutral	AA	100	somatic	0	0.0141560005676107	0.017435445343576
5	180133845	180160440	2	neutral	AA	36.3788	germline	1	0.550415340774179	0.492574024088584
5	181043985	181046940	4	gain	AAAB	100	somatic	0	0.0832812515580672	0.270065860963393
6	257085	384150	4	gain	AABB	0.759837	germline	1	6.3852303843177e-28	0
6	1205640	1247010	2	neutral	AA	27.539	somatic	0	0.177525407017585	0.168392149918673
6	1247010	1249965	3	gain	-	-1	somatic	0	0.0835880598349847	0.270599548120649
6	1879380	1920750	2	neutral	AA	11.4356	somatic	0	0.0492501907186954	0.0826163951942263
6	1988715	2030085	2	neutral	AA	89.3583	somatic	0	0.119418893480398	0.0633085252820774
6	10966005	11205360	2	neutral	AA	21.5732	somatic	0	0.0637114679035078	0.0548612543338127
6	12242565	12248475	2	neutral	AA	100	somatic	0	0.234083397758479	0.312444545776037
6	15170970	15179835	2	neutral	AA	36.3786	somatic	0	0.249176867685432	0.563656139859229
6	20877075	20897760	2	neutral	AA	54.5678	somatic	0	0.824567549965646	0.802465524032222
6	20956860	20959815	4	gain	AABB	16.6322	germline	1	0.0832812515580672	0.270065860963393
6	32487270	32667525	0	loss	-	-1	somatic	0	3.05547713082235e-16	0
6	35657985	35663895	1	loss	A	-1	germline	1	0.0206412605338089	0.0562393029772162
6	35788005	35799825	3	gain	AAB	2.80251	germline	1	0.000534019544050133	0.000673487966870834
6	40465770	40548510	2	neutral	AA	42.1737	somatic	0	0.216504075012731	0.377496121539289
6	49620360	49641045	2	neutral	AA	100	somatic	0	0.594806104977495	0.60961179987852
6	60231765	60240630	3	gain	-	-1	germline	1	0.00270189857329244	0.0049604175925716
6	66215640	66227460	2	neutral	AA	100	somatic	0	0.130987315526998	0.299398958699965
6	76971840	76980705	2	neutral	AA	54.5678	somatic	0	0.379685999571635	0.835532983608678
6	82296750	82361760	2	neutral	AA	100	somatic	0	0.669022773799083	0.694471613955078
6	93797610	93874440	2	neutral	AA	20.3375	somatic	0	0.663261766636824	0.430189874061801
6	103289070	103315665	1	loss	A	-1	germline	1	5.90520960507057e-06	1.2545398488939e-06
6	104420835	104468115	2	neutral	AA	32.4485	somatic	0	0.688416182343654	0.490004137852401
6	105073890	105091620	2	neutral	AA	54.5678	germline	1	0.039219494649231	0.0155753658735759
6	111359175	111391680	2	neutral	AA	54.5679	somatic	0	0.651105667573007	0.677146712276263
6	112272270	112449570	2	neutral	AA	43.2687	somatic	0	0.000590243668445917	0.000245351945622474
6	114908130	114931770	2	neutral	AA	100	somatic	0	0.709754267340013	0.586170697616399
6	118643250	118646205	5	gain	AAAAA	7.4587	germline	1	0.0832805238847742	0.270064597214943
6	118725990	119030355	2	neutral	AA	38.8189	somatic	0	0.356989830379145	0.529001783024829
6	128950290	129021210	3	gain	AAB	3.29733	germline	1	1.02038205570605e-14	0
6	136970160	136976070	2	neutral	AA	54.5678	somatic	0	0.264984039126105	0.436717442806121
6	146621190	146647785	2	neutral	AA	54.6128	somatic	0	0.0296018375492543	0.0780725000260064
6	149017695	149059065	2	neutral	AA	32.5817	somatic	0	0.437321899032529	0.520125579987771
6	151399425	151417155	2	neutral	AA	54.5678	somatic	0	0.686755326352933	0.800941918332833
6	153636360	153642270	1	loss	A	-1	germline	1	0.0197181762903755	0.0533136015480933
6	157312380	157315335	9	gain	AAAAAABBB	3.58351	germline	1	0.0832725198184732	0.270050696266881
6	159268590	159386790	2	neutral	AA	12.4569	somatic	0	0.000287201070804785	0.00356956963034882
6	163396725	163441050	2	neutral	AA	54.6128	somatic	0	0.673052018328046	0.781446828502091
6	165311565	165320430	1	loss	A	-1	germline	1	0.00662091319569883	0.00957335038012386
6	168553200	169028955	2	neutral	AA	12.8086	somatic	0	0.00456221461154343	0.0206957467963819
7	904230	907185	4	gain	AAAA	9.45995	germline	1	0.0832812515580672	0.270065860963393
7	7405230	7487970	2	neutral	AA	54.5678	somatic	0	0.213635822165402	0.377750044935056
7	9760365	9766275	1	loss	A	-1	germline	1	0.014937130204911	0.0384609283935772
7	12662175	12671040	3	gain	AAB	11.2302	germline	1	0.00270411779349999	0.00496512432874019
7	20277210	20280165	0	loss	-	-1	germline	1	0.083273247435113	0.270051959967838
7	26095605	26107425	1	loss	A	-1	germline	1	0.00165886181430948	0.0016024711310797
7	56006115	56074080	2	neutral	AA	3.18197	somatic	0	3.46070146480934e-05	0.00112136768620952
7	57486570	57495435	3	gain	AAB	2.73537	germline	1	0.00270244275623255	0.00496154121739001
7	57879585	57994830	2	neutral	AA	8.90779	somatic	0	0.696210001585426	0.423867466123923
7	58059840	58062795	2	neutral	AA	54.5678	somatic	0	0.097124510481711	0.293342193284537
7	58062795	58065750	4	gain	AABB	7.79368	germline	1	0.0832812515580672	0.270065860963393
7	61044390	61059165	3	gain	-	-1	germline	1	0.000108417252328067	9.21319627196215e-05
7	61059165	62297310	2	neutral	AA	4.75509	germline	1	0.801514652701882	0.981144566600566
7	62297310	62359365	2	neutral	AA	2.02793	somatic	0	2.73633725510734e-08	3.09262473408012e-08
7	62359365	62400735	2	neutral	AA	-1	somatic	0	NA	NA
7	62400735	62406645	4	gain	-	-1	germline	1	0.0143110447913438	0.0366390047508002
7	62406645	62439150	2	neutral	AA	-1	somatic	0	NA	NA
7	62439150	62456880	3	gain	AAB	2.3489	germline	1	0.00128420972789076	0.000521129049215419
7	62456880	62518935	2	neutral	AA	-1	somatic	0	NA	NA
7	62518935	62575080	2	neutral	AA	2.36673	germline	1	0.0755243546022064	0.126213064707468
7	65225715	65228670	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
7	65796030	65822625	3	gain	AAB	0.152192	germline	1	2.05406013057524e-07	3.09771026607564e-08
7	70854990	70899315	3	gain	AAB	3.51222	germline	1	2.15619281997169e-11	3.9146463848283e-13
7	74297565	74362575	2	neutral	AA	12.5213	somatic	0	8.24228911051471e-05	0.000290684466098923
7	98236020	98528565	2	neutral	AA	23.03	somatic	0	4.90829420368446e-08	4.02555580980568e-07
7	100951665	100957575	3	gain	AAB	2.88425	germline	1	0.014312078278216	0.0366417710331238
7	100957575	100960530	13	gain	AAAAAAAABBBBB	3.58856	germline	1	0.0832674266461974	0.27004185048097
7	100960530	100972350	3	gain	AAB	0.832288	germline	1	0.000532856807283824	0.000672294278677543
7	111639900	111672405	1	loss	A	-1	germline	1	7.46868016417505e-08	5.96610139069753e-09
7	112795305	112798260	0	loss	-	-1	germline	1	0.0832754303159335	0.270055751096641
7	129582660	129597435	2	neutral	AA	18.1893	somatic	0	0.0922748743632445	0.0430532008196136
7	130472115	130676010	2	neutral	AA	19.5144	somatic	0	0.435765534376987	0.510666367565346
7	138619050	138642690	2	neutral	AA	10.6971	somatic	0	0.2036758837527	0.457152709199733
7	143846445	143849400	4	gain	AAAB	76.4639	germline	1	0.0832812515580672	0.270065860963393
7	146095200	146104065	1	loss	A	-1	somatic	0	0.00685816726639298	0.0095633805976808
7	148376460	148379415	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
7	152401170	152407080	13	gain	AAAAAAAABBBBB	5.8909	germline	1	0.0143064523127988	0.0366324355625891
7	154599690	154608555	1	loss	A	-1	germline	1	0.00630207928191725	0.00901780922073014
7	155326620	155338440	3	gain	AAB	3.38052	somatic	0	0.000541873536757509	0.000689200806520907
7	157350795	157398075	2	neutral	AA	9.37048	somatic	0	0.146695543996096	0.0975830270306881
7	158148645	158151600	5	gain	AAABB	5.75928	germline	1	0.0832805238847742	0.270064597214943
7	158594850	158597805	5	gain	AAABB	26.3031	germline	1	0.0832797962166317	0.270063333470808
7	158869665	158970135	2	neutral	AA	10.1697	somatic	0	0.0824258512439614	0.19922673885269
8	644190	650100	0	loss	-	-1	germline	1	0.0143089780150932	0.0366396963042472
8	5738610	5747475	1	loss	A	-1	germline	1	0.00485105105709989	0.00735776852313286
8	6110940	6116850	1	loss	A	-1	germline	1	0.0205393554313626	0.0559051658818502
8	25723275	25729185	3	gain	-	-1	germline	1	0.0143172467001858	0.0366511085851166
8	38072220	38078130	1	loss	A	-1	somatic	0	0.0212143572220051	0.0565837252979373
8	43237560	43240515	10	gain	-	-1	germline	1	0.0832703369994546	0.270046905189877
8	43240515	43243470	5	gain	-	-1	germline	1	0.0832797962166317	0.270063333470808
8	55751985	55769715	2	neutral	AA	100	somatic	0	0.0045439642843487	0.0133120203754564
8	60385425	60633645	2	neutral	AA	19.038	germline	1	0.86973928743737	0.714424589946371
8	70101465	70107375	1	loss	A	-1	somatic	0	0.0287237253806658	0.0563195902330291
8	70654050	70689510	2	neutral	AA	100	somatic	0	0.11026320728367	0.276367226989513
8	70985010	71029335	2	neutral	AA	100	somatic	0	0.991826570549853	0.989753531669906
8	79137855	79149675	2	neutral	AA	100	somatic	0	0.691598373778462	0.56483704561282
8	81897825	81962835	2	neutral	AA	8.39564	somatic	0	0.228973384491736	0.160635366796613
8	84152490	84164310	2	neutral	AA	100	germline	1	0.249326555608236	0.27526304188365
8	98886120	98915670	2	neutral	AA	36.5411	somatic	0	0.519892696342431	0.67130565872369
8	110726805	111282345	2	neutral	AA	76.3051	somatic	0	0.432911055211703	0.152832831862191
8	111282345	111285300	0	loss	-	-1	somatic	0	0.0832681542267867	0.27004311415171
8	116388585	116421090	2	neutral	AA	54.5678	somatic	0	0.16252037975718	0.260896903547389
8	119006715	119015580	1	loss	A	-1	somatic	0	0.00480688695496781	0.00849030457567945
8	119142645	119148555	1	loss	A	-1	somatic	0	0.0214386748181691	0.0493589832047839
8	120918600	120921555	1	loss	A	-1	somatic	0	0.0836274790630565	0.270666629527875
8	133577820	133633965	2	neutral	AA	100	germline	1	0.0484334412519254	0.0539840466908906
8	136786950	136840140	2	neutral	AA	36.3858	somatic	0	0.401298821212723	0.396997839982994
8	139960620	139963575	0	loss	-	-1	germline	1	0.0832696094034153	0.270045641506164
8	141872505	141996615	2	neutral	AA	5.32983	somatic	0	0.00496531654833486	0.0408374497120773
8	144124215	144127170	6	gain	AAAAAB	34.6758	germline	1	0.0832783408957977	0.27006080599549
9	641235	647145	1	loss	A	-1	somatic	0	0.0241257419766667	0.0560380153492757
9	11955930	12142095	1	loss	A	-1	germline	1	2.13370890538533e-37	0
9	18997695	19044975	2	neutral	AA	13.6634	somatic	0	0.399339138478092	0.548920870309928
9	19044975	19095210	2	neutral	AA	100	somatic	0	0.00179252246686022	0.000561822381490384
9	22496415	22502325	1	loss	A	-1	somatic	0	0.0209388814075516	0.052032012348888
9	23362230	23377005	1	loss	A	-1	germline	1	0.000226418158612923	0.000266011049561476
9	32206545	32250870	2	neutral	AA	54.5678	somatic	0	0.884805831496039	0.900148690585237
9	33713595	33716550	1	loss	A	-1	somatic	0	0.101971391078706	0.30114582128136
9	36148515	36151470	2	neutral	AA	100	somatic	0	0.397416692396975	0.636850740963656
9	36151470	36639045	2	neutral	AA	60.4329	somatic	0	5.67787577313497e-14	1.03255182182238e-11
9	36639045	36766110	2	neutral	AA	13.6424	somatic	0	0.598010427864872	0.390442274959478
9	40867650	40870605	4	gain	AABB	9.67033	germline	1	0.0832819792365107	0.270067124716161
9	40870605	40882425	4	gain	AABB	3.08875	germline	1	0.0143110447913438	0.0366390047508002
9	40909020	40911975	5	gain	AAAAA	3.99859	germline	1	0.0832805238847742	0.270064597214943
9	40911975	40914930	7	gain	-	-1	germline	1	0.0832761579531742	0.270057014814887
9	69126315	69129270	0	loss	-	-1	germline	1	0.0832805238847742	0.270064597214931
9	69129270	69194280	2	neutral	AA	100	germline	1	0.0666396849018555	0.069836479258224
9	81717570	81747120	2	neutral	AA	18.1979	germline	1	0.059155063057675	0.105418488524335
9	91746840	91820715	2	neutral	AA	27.2839	germline	1	0.422996253879199	0.324118394517679
9	98546295	98549250	0	loss	-	-1	germline	1	0.0832666990707581	0.270040586814523
9	101953410	101962275	1	loss	A	-1	germline	1	0.00492964272712937	0.00808679266038714
9	103011300	103017210	1	loss	A	-1	somatic	0	0.0274719173383712	0.0556914793438882
9	110688390	110691345	1	loss	A	-1	germline	1	0.0833482195377388	0.270182144287806
9	121412085	121497780	2	neutral	AA	16.2914	somatic	0	0.787945066482156	0.788560932202446
9	128864595	130835580	1	loss	A	-1	somatic	0	0	0
9	131098575	131261100	2	neutral	AA	100	somatic	0	0.299614382255718	0.730647718027976
9	137354310	137357265	3	gain	AAB	13.7476	somatic	0	0.0833176417900278	0.270129053889701
9	137357265	137363175	1	loss	A	-1	somatic	0	0.024233207218598	0.0556402793655767
9	137513880	137546385	2	neutral	AA	10.9647	somatic	0	0.0402232820020251	0.142323730017835
9	137714820	137717775	5	gain	AAAAB	30.9858	germline	1	0.0832805238847742	0.270064597214943
10	2390595	2393550	4	gain	-	-1	germline	1	0.0832819792365107	0.270067124716161
10	5847945	5850900	0	loss	-	-1	germline	1	0.0832652439353293	0.270038059494602
10	38524335	38530245	11	gain	-	-1	germline	1	0.01430851876724	0.0366386589783577
10	38577525	38583435	3	gain	-	-1	germline	1	0.0143171318284798	0.0366569888525435
10	39472890	39478800	5	gain	-	-1	germline	1	0.0143109299635329	0.0366386589783577
10	39558585	39561540	0	loss	-	-1	germline	1	0.0832666990707581	0.270040586814523
10	41828025	41842800	2	neutral	AA	4.08664	germline	1	0.334517576032619	0.192829342566862
10	41857575	41898945	31	gain	AAAAAAAAAAAAAAAAAAAAABBBBBBBBBB	14.36	germline	1	2.20927966232002e-05	1.22905124204653e-05
10	42300825	42321510	2	neutral	AA	1.422	somatic	0	1.30382794981582e-05	2.45210605750446e-05
10	46514655	46558980	4	gain	AABB	0.897797	germline	1	4.24811628832284e-10	1.02367003762538e-11
10	54052860	54058770	2	neutral	AA	100	somatic	0	0.995022129822683	0.834617740142505
10	56224785	56233650	2	neutral	AA	100	somatic	0	0.956480908764093	0.98899778359182
10	58030290	58039155	2	neutral	AA	54.5678	somatic	0	0.710644542530089	0.983577663298826
10	60527265	60586365	2	neutral	AA	54.5678	somatic	0	0.0515116117415844	0.0652573326028111
10	61375350	61585155	2	neutral	AA	58.0953	somatic	0	0.135758623983977	0.289286162977581
10	67725645	67728600	1	loss	A	-1	germline	1	0.0832899840393239	0.270081026281489
10	74457135	74468955	2	neutral	AA	54.5678	germline	1	0.674133942400842	0.978980189327361
10	74545785	74604885	2	neutral	AA	15.4127	somatic	0	0.567202515205689	0.231160919157057
10	93638040	93685320	2	neutral	AA	21.8271	somatic	0	0.217534414281434	0.297146461756001
10	106713915	106787790	2	neutral	AA	54.5679	germline	1	0.113047691817988	0.137536130023553
10	127712145	127721010	2	neutral	AA	54.5678	somatic	0	0.769612031054605	0.935731236148142
10	128462715	128465670	12	gain	AAAAAAABBBBB	100	germline	1	0.0832674266461974	0.27004185048097
10	130906500	131077890	2	neutral	AA	8.40979	somatic	0	0.000229553854675669	0.00224650874512267
10	131624565	131645250	2	neutral	AA	8.42269	somatic	0	0.201296109608353	0.255553679213114
11	5762250	5788845	1	loss	A	-1	germline	1	8.98662558582231e-07	2.13635222845454e-07
11	21793125	21799035	1	loss	A	-1	germline	1	0.0190617918529971	0.0496622634597844
11	28988550	28991505	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
11	30584250	30661080	2	neutral	AA	16.0252	somatic	0	0.488588943636264	0.651442603337291
11	45406530	45412440	1	loss	A	-1	somatic	0	0.0272358212954331	0.0580723301269593
11	47034735	47043600	1	loss	A	-1	somatic	0	0.0288341739471535	0.056398970578787
11	48713175	48716130	0	loss	-	-1	germline	1	0.0832747026838432	0.270054487382724
11	48804780	48943665	2	neutral	AA	1.31865	somatic	0	0.130007777711886	0.021927308413442
11	50175900	50178855	1	loss	A	-1	germline	1	0.0832870731298288	0.270075971106387
11	50755080	50805315	2	neutral	AA	5.66939	somatic	0	0.170247185762299	0.150709441898239
11	54756150	54776835	1	loss	A	-1	germline	1	7.02389802147279e-05	3.78522195549902e-05
11	55598325	55684020	1	loss	A	-1	germline	1	3.34386291238855e-17	0
11	59392545	59478240	2	neutral	AA	100	somatic	0	0.00537785599076031	0.0228020212518185
11	63426120	63432030	3	gain	AAB	9.14389	germline	1	0.0144808969871868	0.0371384892513383
11	64927260	64944990	2	neutral	AA	55.5692	somatic	0	0.433536225846478	0.935271985083734
11	70370370	70373325	3	gain	AAB	29.3826	somatic	0	0.0833023563241019	0.270102511546213
11	71383935	71528730	2	neutral	AA	4.39054	germline	1	6.77936053387467e-07	8.43060650890237e-06
11	76289235	76371975	2	neutral	AA	100	somatic	0	0.663438207122563	0.897671732266127
11	77175735	77264385	2	neutral	AA	3.49718	germline	1	0.033090300435688	0.0271701081367249
11	82976400	83044365	2	neutral	AA	61.8129	somatic	0	0.773508923845172	0.831353191222622
11	95632665	95635620	1	loss	A	-1	somatic	0	0.0891779945201514	0.280159770403767
11	97393845	97402710	1	loss	A	-1	germline	1	0.00638496674212281	0.00940589388624324
11	97881420	98832930	2	neutral	AA	6.50192	somatic	0	0.524607589028886	0.123033123687814
11	99751935	99816945	2	neutral	AA	36.3786	somatic	0	0.340338399703291	0.603414823740691
11	104400150	104403105	0	loss	-	-1	somatic	0	0.083268881812526	0.270044377826779
11	104837490	104899545	2	neutral	AA	100	somatic	0	0.541976903014768	0.56219881430506
11	107913645	107919555	1	loss	A	-1	somatic	0	0.0238899268941096	0.0564678782105122
11	114600810	114603765	1	loss	A	-1	somatic	0	0.0869438237651732	0.276369230294513
11	115661655	115738485	2	neutral	AA	36.3786	germline	1	0.305527012095976	0.526656018370653
11	118950570	118991940	2	neutral	AA	27.2839	somatic	0	0.583713115980429	0.154027325042691
11	126225780	126228735	3	gain	AAA	36.1233	somatic	0	0.0833059955146969	0.270108830979135
11	126406035	126420810	2	neutral	AA	54.5678	somatic	0	0.805028983722899	0.855512285702013
11	131264055	131267010	1	loss	A	-1	germline	1	0.0857875142219543	0.274391418285725
12	2254665	2257620	5	gain	-	-1	germline	1	0.0832797962166317	0.270063333470808
12	6131625	6140490	1	loss	A	-1	germline	1	0.00523160750703492	0.00955354786468887
12	9482595	9509190	1	loss	A	-1	germline	1	0.0059152354103183	0.00920684958393225
12	18096420	18102330	1	loss	A	-1	germline	1	0.0317065663115384	0.087520868225525
12	34691700	34697610	1	loss	A	-1	germline	1	0.0203996194003967	0.0552192989866298
12	37679205	37717620	2	neutral	AA	41.307	somatic	0	0.6455837586062	0.768691359383126
12	37720575	37723530	5	gain	AAAAA	8.70699	germline	1	0.0832805238847742	0.270064597214943
12	37723530	37741260	2	neutral	AA	8.7592	germline	1	0.627595038909452	0.360573297178466
12	40501230	40516005	2	neutral	AA	0.975484	somatic	0	0.0467435083952519	0.119995047922062
12	41949180	42309690	2	neutral	AA	1.0805	somatic	0	0.018196959594579	0.0239295350669453
12	45509955	45515865	1	loss	A	-1	germline	1	0.0230946480091987	0.048899286983168
12	50028150	50045880	2	neutral	AA	22.821	somatic	0	0.663048726238674	0.994158484277916
12	51650445	51724320	2	neutral	AA	36.3786	somatic	0	0.0502657449397021	0.0641063566774265
12	56473005	56558700	2	neutral	AA	9.12945	somatic	0	0.00136848402133989	0.00495281315299112
12	56857155	56901480	2	neutral	AA	100	somatic	0	0.109735079080353	0.0531199854540696
12	60547950	60583410	2	neutral	AA	100	somatic	0	0.510306875917995	0.361961616807634
12	63284280	63313830	2	neutral	AA	21.8272	somatic	0	0.119514364450069	0.149015672899705
12	66425445	66496365	2	neutral	AA	100	somatic	0	0.953151956818968	0.862003349025672
12	69469095	69531150	2	neutral	AA	36.385	somatic	0	0.932691225659857	0.630084447354319
12	70887495	70943640	2	neutral	AA	13.2145	somatic	0	0.619664465201922	0.566514172226386
12	73461300	73520400	2	neutral	AA	64.1424	somatic	0	0.822087907313767	0.780230723886223
12	75937590	76020330	2	neutral	AA	42.5076	somatic	0	0.539560654682031	0.520406533471046
12	79188090	79194000	2	neutral	AA	100	somatic	0	0.688590197873774	0.681243188907031
12	80881305	80899035	2	neutral	AA	100	somatic	0	0.656269859211321	0.728431549227932
12	81732345	81820995	2	neutral	AA	54.5787	somatic	0	0.0148998134494367	0.00340413081998703
12	82385400	82403130	2	neutral	AA	36.3876	somatic	0	0.103594596301986	0.326129318206314
12	86708565	86782440	2	neutral	AA	100	somatic	0	0.901947316684228	0.958857310289787
12	87872835	87917160	2	neutral	AA	100	somatic	0	0.0257386774504742	0.0191551751264468
12	90092040	90097950	1	loss	A	-1	germline	1	0.0175036472102418	0.0464009190333082
12	92955435	93038175	2	neutral	AA	45.7623	somatic	0	0.106430059624483	0.143726246434799
12	99595320	99627825	2	neutral	AA	100	somatic	0	0.371352375544034	0.291921803896559
12	101622450	101669730	2	neutral	AA	36.4028	somatic	0	0.733348962203419	0.857415146274288
12	104544945	104559720	2	neutral	AA	100	somatic	0	0.89363294839328	0.963843709247622
12	109145880	109166565	2	neutral	AA	100	somatic	0	0.290563663109928	0.191711176476589
12	110366295	110389935	2	neutral	AA	27.3954	somatic	0	0.376606590078613	0.610373086396681
12	112239765	112248630	2	neutral	AA	36.3786	somatic	0	0.118925893003109	0.222154252887221
12	112446615	112455480	2	neutral	AA	54.5678	somatic	0	0.785551078008271	0.776773525398571
12	122803890	122824575	2	neutral	AA	100	somatic	0	0.428089526999615	0.452309189665386
12	127002945	127008855	1	loss	A	-1	germline	1	0.0235322328344717	0.0505772130321445
12	128637060	128669565	2	neutral	AA	20.3431	somatic	0	0.113916570757678	0.189386156243247
12	130764660	130814895	2	neutral	AA	15.6848	somatic	0	0.783447862703333	0.779780486160358
12	131018790	131074935	2	neutral	AA	7.87261	somatic	0	0.0135622655033395	0.0287037815158815
13	21994065	22017705	2	neutral	AA	100	somatic	0	0.0723095859376701	0.105022742542685
13	22017705	22020660	1	loss	A	-1	germline	1	0.120383657231407	0.329513784785732
13	22020660	22023615	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
13	23379960	23391780	2	neutral	AA	100	somatic	0	0.782361683128717	0.715850612577528
13	24996345	25002255	1	loss	A	-1	germline	1	0.0243406303453729	0.0544664877221224
13	25365720	25383450	2	neutral	AA	36.3786	somatic	0	0.153685254696295	0.108220953870721
13	26036505	26048325	2	neutral	AA	100	somatic	0	0.74932497670542	0.699631419286422
13	27126900	27144630	2	neutral	AA	100	somatic	0	0.383236820609063	0.446721519245914
13	27446040	27496275	2	neutral	AA	77.6543	somatic	0	0.113152997396576	0.414085467906468
13	33562890	33571755	1	loss	A	-1	germline	1	0.00467090143596362	0.00956478602239363
13	37498950	37510770	1	loss	A	-1	germline	1	0.00136647088597719	0.00152434837875215
13	38199285	38252475	2	neutral	AA	54.5678	somatic	0	0.177411121189614	0.265427062883385
13	39307410	39372420	2	neutral	AA	52.9711	somatic	0	0.341394713857471	0.442222529188254
13	43010025	43027755	2	neutral	AA	54.5681	somatic	0	0.744122634886454	0.997258007390028
13	43388265	43577385	2	neutral	AA	11.911	somatic	0	0.996835305202835	0.867512418712309
13	45418350	45436080	2	neutral	AA	10.4909	somatic	0	0.000482941474181889	0.000913408515291647
13	50495040	50500950	0	loss	-	-1	germline	1	0.0143061079293215	0.0366313984165507
13	55329420	55882005	2	neutral	AA	100	somatic	0	0.470194866397235	0.296481330974835
13	57953460	57959370	2	neutral	AA	100	somatic	0	0.462995528871376	0.832538895544322
13	58718805	58730625	2	neutral	AA	100	somatic	0	0.756042419025197	0.959319495311363
13	61960440	61963395	1	loss	A	-1	somatic	0	0.0835471965303061	0.270527417502385
13	63027195	63059700	3	gain	AAB	0.320287	germline	1	7.00918421054652e-08	4.22882313610984e-08
13	63059700	63065610	4	gain	AAAB	1.4147	germline	1	0.014311733775277	0.0366403878691208
13	63065610	63068565	5	gain	AAABB	0.979384	germline	1	0.0832797962166317	0.270063333470808
13	70024635	70334910	2	neutral	AA	12.0783	somatic	0	0.129190017672213	0.0487458733307328
13	71901060	71906970	1	loss	A	-1	germline	1	0.0206883323203151	0.056376855002524
13	72022215	72028125	2	neutral	AA	100	somatic	0	0.951062135823373	0.865890619643294
13	72232020	72237930	1	loss	A	-1	germline	1	0.0223497662553378	0.0589272239745146
13	73866135	73877955	2	neutral	AA	100	somatic	0	0.0954466894900215	0.0778980876528954
13	74752635	74799915	2	neutral	AA	89.7772	somatic	0	0.362411513878684	0.604503541397437
13	74808780	74811735	1	loss	A	-1	somatic	0	0.110625346292647	0.314722303204506
13	74903340	74941755	2	neutral	AA	48.9398	somatic	0	0.465491732561421	0.349817490315834
13	79371300	79377210	1	loss	A	-1	somatic	0	0.0337115665013204	0.0704851824940933
13	81164985	81179760	2	neutral	AA	75.9199	somatic	0	0.227352131585756	0.222011799275151
13	81519585	81543225	2	neutral	AA	54.5678	somatic	0	0.322847744728528	0.345477627234849
13	84705075	84708030	1	loss	A	-1	germline	1	0.0881035429023913	0.278343143454975
13	85331535	85437915	2	neutral	AA	90.9005	somatic	0	0.170028079241253	0.0788058973843933
13	88345635	88351545	2	neutral	AA	100	somatic	0	0.0326023551761452	0.0608371578778121
13	90313665	90423000	2	neutral	AA	37.6053	somatic	0	0.61723034957032	0.593167306686392
13	91510440	91575450	2	neutral	AA	32.5707	somatic	0	0.934274392593052	0.98908592974912
13	93354360	93360270	2	neutral	AA	100	somatic	0	0.880917122812195	0.995786084416436
13	94985520	95029845	2	neutral	AA	81.8224	somatic	0	0.552853731673536	0.750214858658698
13	95573565	95614935	2	neutral	AA	36.3786	somatic	0	0.988865865941039	0.913000904489222
13	97813455	97843005	2	neutral	AA	54.5678	somatic	0	0.469699642649121	0.703610436211165
13	102937425	102949245	2	neutral	AA	54.57	somatic	0	0.202007769433733	0.0893716072073962
13	104299680	104308545	2	neutral	AA	54.5678	germline	1	0.919931396573607	0.992258199813019
13	108297795	108300750	1	loss	A	-1	germline	1	0.0858986285079088	0.274581956471292
13	109021770	109024725	1	loss	A	-1	germline	1	0.0832863454153317	0.270074707323403
13	109216800	109219755	1	loss	A	-1	germline	1	0.0832994450643466	0.270097456077565
13	109704375	109713240	2	neutral	AA	100	somatic	0	0.454529487816758	0.653986287515571
13	111935400	111944265	1	loss	A	-1	germline	1	0.00692998260739315	0.00948560898236517
13	112012230	112015185	3	gain	AAB	8.98798	somatic	0	0.0833045398230052	0.270106303193016
13	112836675	112848495	2	neutral	AA	22.9353	germline	1	0.0836159796093588	0.0483773249588582
13	112872135	112875090	3	gain	AAB	16.5733	somatic	0	0.0833045398230052	0.270106303193016
13	113262195	113265150	3	gain	AAA	58.4655	somatic	0	0.083294350558089	0.270088609173654
13	113587245	113613840	2	neutral	AA	30.1248	somatic	0	0.00903530855659689	0.0275423797135002
13	113613840	113628615	2	neutral	AA	5.04078	germline	1	0.020437942832951	0.122071883132894
13	114154605	114157560	1	loss	A	-1	somatic	0	0.121116471205019	0.330604132896461
13	114157560	114331905	2	neutral	AA	13.8136	somatic	0	0.741648339507146	0.656427507831843
14	0	16092930	3	gain	AAB	-1	germline	1	NA	NA
14	16092930	16095885	9	gain	-	-1	germline	1	0.0832710646006441	0.270048168877895
14	16095885	18681510	3	gain	AAB	-1	germline	1	NA	NA
14	18681510	19955115	3	gain	AAB	0.340301	germline	1	6.49132222337968e-28	0
14	20235840	20238795	0	loss	-	-1	germline	1	0.0832834346088489	0.270069652234634
14	25746915	25749870	2	neutral	AA	100	somatic	0	0.413013689893664	0.650299445155529
14	34348920	34351875	1	loss	A	-1	germline	1	0.0848059952339118	0.272703804540377
14	34957650	34963560	1	loss	A	-1	somatic	0	0.022204250641308	0.0561586132765507
14	36514935	36807480	2	neutral	AA	15.6692	somatic	0	2.2375167125279e-05	0.000220192243154393
14	40146630	40149585	1	loss	A	-1	germline	1	0.0882262204386186	0.278551175326432
14	40861740	40873560	2	neutral	AA	100	somatic	0	0.668521953594815	0.595949947428799
14	46038900	46650585	2	neutral	AA	39.409	somatic	0	0.10467493139548	0.197665963759113
14	49020495	49023450	1	loss	A	-1	somatic	0	0.120689469954511	0.329969134293424
14	52528080	52531035	1	loss	A	-1	germline	1	0.0923824864256709	0.285528002864738
14	52870860	52879725	2	neutral	AA	100	somatic	0	0.968533710723904	0.803556281668457
14	55624920	55675155	2	neutral	AA	28.4583	somatic	0	0.577562430650538	0.968148327633326
14	60051510	60084015	2	neutral	AA	57.0069	germline	1	0.975912712085898	0.999037314507344
14	60432705	60435660	1	loss	A	-1	somatic	0	0.0862394056665525	0.275165676956803
14	60923235	60979380	2	neutral	AA	55.2954	germline	1	0.00504216539075455	0.016071847720433
14	63334515	63358155	2	neutral	AA	100	somatic	0	0.88159528992584	0.562179770303726
14	65601000	65612820	1	loss	A	-1	germline	1	0.00181949289565192	0.0016127525880647
14	67025310	67054860	2	neutral	AA	28.9672	somatic	0	0.260972187594152	0.269119709030095
14	72799380	72805290	2	neutral	AA	22.0519	somatic	0	0.248384755724228	0.25800914863993
14	73774530	73780440	1	loss	A	-1	germline	1	0.0208220514297236	0.0521268251444428
14	76661565	76664520	2	neutral	AA	100	germline	1	0.328136986131128	0.573219677373757
14	77731275	77740140	2	neutral	AA	54.5679	somatic	0	0.660571936540429	0.963762652339226
14	79640205	79649070	1	loss	A	-1	germline	1	0.00481349979147194	0.00916374055496816
14	82329255	82358805	2	neutral	AA	100	somatic	0	0.733279682880448	0.794739327130042
14	84829185	84838050	1	loss	A	-1	somatic	0	0.0076666067511374	0.0101636496680186
14	94888005	94920510	2	neutral	AA	21.8546	somatic	0	0.119772422222796	0.302677271174132
14	96631455	96711240	2	neutral	AA	100	somatic	0	0.040662327467691	0.00241345910380097
14	97364295	97476585	2	neutral	AA	19.3925	somatic	0	0.20596928290291	0.442806785368646
14	99418020	99420975	3	gain	AAB	24.2252	somatic	0	0.0832914395249757	0.270083553894952
14	99926280	99929235	6	gain	AAABBB	22.8897	germline	1	0.0832790685536395	0.270062069730991
14	101711100	101725875	2	neutral	AA	17.8953	somatic	0	0.0322516402749484	0.150436026744536
14	102774900	102780810	2	neutral	AA	100	somatic	0	0.0629567242135789	0.111560840515451
14	104636550	104642460	2	neutral	AA	36.3786	germline	1	0.213434802429204	0.304419666584125
14	105203910	105369390	2	neutral	AA	81.1025	somatic	0	0.0934566578754186	0.311342798724628
15	0	17079900	6	gain	AAAABB	-1	germline	1	NA	NA
15	17079900	17082855	16	gain	-	-1	germline	1	0.0832652439353293	0.270038059494613
15	17082855	20345175	6	gain	AAAABB	-1	somatic	0	0.0181580317818735	0.0225146347277333
15	20345175	20673180	6	gain	AAAABB	2.72186	germline	1	9.1489739797331e-11	1.38544731242973e-12
15	22224555	22271835	4	gain	AAAB	1.98276	germline	1	4.5983854375391e-06	1.66451380700927e-06
15	25282980	25291845	2	neutral	AA	54.5682	germline	1	0.357574065733866	0.397861105604385
15	25525290	25531200	3	gain	AAA	11.8314	somatic	0	0.0144172624856859	0.0369450900198033
15	25590300	25628715	2	neutral	AA	54.7039	somatic	0	0.951837524821154	0.966236143245364
15	26467935	26657055	2	neutral	AA	100	somatic	0	0.649825495890579	0.282330461196897
15	27522870	27525825	2	neutral	AA	100	somatic	0	0.223557432376706	0.463272900023704
15	28867395	28896945	2	neutral	AA	54.5678	somatic	0	0.638908715869141	0.83005000932478
15	33033945	33090090	2	neutral	AA	46.1331	somatic	0	0.513044100696438	0.185641036263622
15	34437570	34520310	1	loss	A	-1	germline	1	1.29618223594304e-16	0
15	34582365	34629645	2	neutral	AA	100	somatic	0	0.76934924750933	0.630546997346901
15	35519100	35631390	2	neutral	AA	100	somatic	0	0.0240762927786659	0.0529067331144456
15	38228835	38231790	2	neutral	AA	100	somatic	0	0.721202913453663	0.860296200406178
15	44017680	44020635	2	neutral	AA	100	germline	1	0.786990667588193	0.892011788477918
15	48453135	48456090	2	neutral	AA	100	germline	1	0.23363553996254	0.474767027127447
15	48784095	48828420	2	neutral	AA	94.7681	somatic	0	0.110655788296906	0.21028346336073
15	55426935	55545135	2	neutral	AA	100	somatic	0	0.000249684015017845	0.000516093682023988
15	56907390	56993085	2	neutral	AA	54.5679	somatic	0	0.558550639792221	0.736291369926069
15	58633110	58636065	2	neutral	AA	100	somatic	0	0.669877088232317	0.832384087989469
15	59188650	59191605	2	neutral	AA	100	somatic	0	0.231196573607602	0.472030067807628
15	59655540	59732370	2	neutral	AA	100	somatic	0	0.0520834057437056	0.0390356806682651
15	60199260	60270180	2	neutral	AA	57.367	somatic	0	0.374045874213955	0.172874617914365
15	60858225	60867090	2	neutral	AA	54.5678	somatic	0	0.855015517001727	0.910618942084817
15	61103490	61106445	2	neutral	AA	100	somatic	0	0.648394251538995	0.819857644921406
15	62244120	62261850	2	neutral	AA	54.5678	somatic	0	0.0439527651661703	0.134789749618402
15	63916650	63943245	2	neutral	AA	96.0293	somatic	0	0.808931477249814	0.936492421293608
15	65134110	65193210	2	neutral	AA	100	somatic	0	0.0384215743406023	0.0131886796851947
15	65219805	65329140	2	neutral	AA	53.3083	somatic	0	0.279084014340395	0.319900611097447
15	66508185	66520005	2	neutral	AA	54.5728	germline	1	0.188667442134237	0.278653925156722
15	67879305	67923630	2	neutral	AA	50.5925	somatic	0	0.0507921158051702	0.0482427392641999
15	70597905	70645185	2	neutral	AA	100	somatic	0	0.765459733755233	0.994255950965901
15	71416440	71422350	1	loss	A	-1	somatic	0	0.0256550744266827	0.0568079384451232
15	72072450	72093135	2	neutral	AA	100	somatic	0	0.443862982161168	0.368643322328039
15	72093135	72096090	0	loss	-	-1	germline	1	0.0832747026838432	0.270054487382724
15	72672315	72796425	2	neutral	AA	34.267	somatic	0	0.00798561144005994	0.00773633968781184
15	74451225	74486685	2	neutral	AA	54.5678	somatic	0	0.0353638804485705	0.0282240905256785
15	74661030	74663985	2	neutral	AA	100	somatic	0	0.226410676421408	0.466576277133731
15	75192930	75648000	2	neutral	AA	100	somatic	0	0.0153953038774106	0.0362999456834754
15	79211730	79214685	2	neutral	AA	100	somatic	0	0.979728865262512	0.959061494605518
15	79782045	79796820	2	neutral	AA	100	somatic	0	0.0993261945523358	0.251403379396167
15	80647860	80665590	2	neutral	AA	36.3786	somatic	0	0.232444460566615	0.153833615629582
15	80704005	80706960	2	neutral	AA	100	somatic	0	0.538924510315333	0.748544285506113
15	81590505	81596415	2	neutral	AA	27.2839	germline	1	0.465647834032147	0.6675662465074
15	82796145	82799100	2	neutral	AA	100	somatic	0	0.703699343394637	0.851076872584905
15	85597485	85615215	2	neutral	AA	100	somatic	0	0.345088813716985	0.0895251936914587
15	86093925	86102790	2	neutral	AA	100	somatic	0	0.299638803909668	0.596837352744094
15	86418975	86433750	2	neutral	AA	54.5678	somatic	0	0.0120723228717799	0.0684442165758656
15	88874580	88939590	2	neutral	AA	57.0805	somatic	0	0.618782303888675	0.60106266031105
15	89864505	89885190	2	neutral	AA	54.5678	somatic	0	0.589975014212939	0.896966778415195
15	90127500	90133410	2	neutral	AA	36.3786	germline	1	0.183198965442334	0.463904670944338
15	90677130	90715545	2	neutral	AA	36.379	somatic	0	0.208960103554951	0.27667592499537
15	92713125	92745630	2	neutral	AA	100	somatic	0	0.142464225689179	0.34107192245467
15	93150465	93156375	2	neutral	AA	100	somatic	0	0.838283301438954	0.833822832112225
16	109335	186165	2	neutral	AA	4.86796	somatic	0	0.813642168547345	0.743893081780613
16	845130	848085	5	gain	AAABB	10.7179	germline	1	0.0832805238847742	0.270064597214943
16	921960	957420	2	neutral	AA	15.9971	somatic	0	0.000567375208252141	0.000441189235106165
16	1022430	1028340	3	gain	AAB	6.89077	somatic	0	0.0143143751514238	0.036645920799239
16	21559680	21583320	4	gain	AABB	10.2593	germline	1	9.64735613580342e-07	2.25299870759699e-07
16	22614615	22685535	4	gain	AAAB	2.69982	germline	1	9.89363202091738e-17	0
16	22685535	22697355	4	gain	AABB	8.66885	germline	1	0.000532383476833195	0.000671241926533339
16	22697355	22700310	3	gain	-	-1	germline	1	0.0833227374501871	0.270137901760575
16	29774580	29818905	2	neutral	AA	36.3962	somatic	0	0.0768613204895081	0.100320960986728
16	34062285	34065240	23	gain	AAAAAAAAAAAAAAAABBBBBBB	100	germline	1	0.0832652439353293	0.270038059494613
16	34068195	34082970	2	neutral	AA	14.0003	germline	1	0.638957137383124	0.637167151889625
16	34082970	34085925	12	gain	AAAAAAABBBBB	89.6782	germline	1	0.0832674266461974	0.27004185048097
16	34085925	34094790	2	neutral	AA	10.0063	germline	1	0.816556661898058	0.974980756973832
16	34094790	34100700	7	gain	AAAAABB	2.0189	germline	1	0.014309437275949	0.036636930158971
16	34204125	34207080	4	gain	AAAB	6.07521	germline	1	0.0832819792365107	0.270067124716161
16	34207080	34210035	2	neutral	AA	18.1893	somatic	0	0.542613300956202	0.751141389801981
16	34210035	34212990	4	gain	AAAB	3.18151	germline	1	0.0832819792365107	0.270067124716161
16	34218900	34954695	2	neutral	AA	0.601469	germline	1	0.772469631941434	0.382088037861152
16	35232465	35522055	3	gain	AAB	3.76718	germline	1	2.67362450507721e-61	0
16	35965305	36089415	2	neutral	AA	4.25667	germline	1	0.146270270255167	0.239751528252053
16	36121920	36124875	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
16	36124875	36127830	3	gain	-	-1	germline	1	0.0832841623027437	0.270070916000362
16	55019145	55025055	2	neutral	AA	54.5678	somatic	0	0.411791023084129	0.356736989725198
16	59673270	59699865	2	neutral	AA	36.3812	somatic	0	0.568816546674078	0.672441915351386
16	65320275	65326185	1	loss	A	-1	somatic	0	0.0218142207735379	0.0571243391149826
16	70151700	70163520	3	gain	AAB	3.84624	germline	1	0.000533002526294164	0.000671951777640012
16	71691255	71703075	2	neutral	AA	36.3803	somatic	0	0.687249984170222	0.732282337443178
16	74108445	74111400	1	loss	A	-1	somatic	0	0.083300900683922	0.270099983803249
16	76504950	76510860	1	loss	A	-1	germline	1	0.0269756034145698	0.0556870039440933
16	77341215	77367810	2	neutral	AA	36.3786	somatic	0	0.735541621059823	0.35146950811979
16	78337050	78348870	1	loss	A	-1	germline	1	0.00125600267267614	0.00143211445171598
16	85969815	85972770	4	gain	AABB	17.6433	somatic	0	0.0832812515580672	0.270065860963393
16	86105745	86983380	2	neutral	AA	17.2309	somatic	0	1.70531911519545e-12	6.1745230039989e-09
16	86986335	87001110	1	loss	A	-1	germline	1	0.000325123718128946	0.000267116087641406
16	88960275	89078475	2	neutral	AA	4.50234	somatic	0	0.201871404493648	0.3971499347736
17	12857205	12898575	2	neutral	AA	30.5667	somatic	0	0.408151545261096	0.556514037172678
17	15176880	15366000	2	neutral	AA	100	somatic	0	0.0116259627758574	0.0291522951454763
17	21290775	21302595	4	gain	AABB	0.371247	germline	1	0.000532375389121274	0.000671241926533339
17	21674925	21858135	4	gain	-	-1	somatic	0	9.65296112548163e-07	2.25921564567244e-07
17	21884730	21967470	1	loss	A	-1	germline	1	1.44425764101335e-14	0
17	21967470	21979290	16	gain	-	-1	germline	1	0.0143061079293215	0.0366313984165538
17	21979290	22156590	6	gain	AAAABB	0.186944	germline	1	9.14678860500338e-11	1.38533629012727e-12
17	22156590	22159545	4	gain	AAAB	5.54872	germline	1	0.0832805238847742	0.270064597214943
17	26713200	26822535	3	gain	-	-1	somatic	0	3.37894534559975e-06	5.26018755512281e-05
17	26822535	26825490	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
17	26863905	26869815	4	gain	-	-1	germline	1	0.014311733775277	0.0366410794454118
17	26937780	26940735	20	gain	AAAAAAAAAAAAAABBBBBB	5.23254	germline	1	0.0832652439353293	0.270038059494613
17	40805595	40849920	2	neutral	AA	18.1893	somatic	0	0.114708936594394	0.348918439358103
17	44623455	44638230	2	neutral	AA	100	somatic	0	0.284969826603427	0.3084961411677
17	50684160	50713710	2	neutral	AA	36.3786	somatic	0	0.196259731540291	0.319904873720804
17	51139230	51171735	2	neutral	AA	27.2845	somatic	0	0.279843878308219	0.292786789475694
17	51818880	51990270	2	neutral	AA	92.4969	germline	1	4.82355884487974e-05	0.0014171651841175
17	53775090	53778045	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
17	56082945	56094765	1	loss	A	-1	germline	1	0.00111584230298712	0.0013139014048501
17	58015515	58169175	2	neutral	AA	19.2441	somatic	0	0.167576921037507	0.500976751382267
17	60530220	60580455	2	neutral	AA	21.8302	somatic	0	0.324665015537559	0.531663856691903
17	69971445	70045320	2	neutral	AA	36.3922	somatic	0	0.999211903449101	0.769676104099418
17	71555325	72181785	2	neutral	AA	10.146	somatic	0	0.498216340314431	0.396773045266061
17	80742420	80745375	4	gain	AAAA	3.46586	germline	1	0.0832812515580672	0.270065860963393
17	82583385	82589295	4	gain	AABB	7.49449	germline	1	0.014311733775277	0.0366403878691208
18	6796500	6823095	2	neutral	AA	100	somatic	0	0.28949424409728	0.375420683165338
18	7142235	7148145	3	gain	AAB	6.7286	somatic	0	0.014329542671254	0.036668751863705
18	21601050	21725160	2	neutral	AA	84.325	somatic	0	2.44285575986001e-08	9.58768675562993e-09
18	24411255	24420120	2	neutral	AA	54.5678	somatic	0	0.906126545275436	0.941264063689227
18	24960885	24978615	2	neutral	AA	54.5678	somatic	0	0.173254925578341	0.168768558008322
18	28211385	28217295	2	neutral	AA	100	somatic	0	0.824387940524561	0.934433853097914
18	29411115	29449530	2	neutral	AA	36.3786	somatic	0	0.969455065909632	0.802495263845149
18	29594325	29597280	1	loss	A	-1	germline	1	0.0832848900017891	0.270072179770386
18	31308225	31320045	2	neutral	AA	100	somatic	0	0.491531334398625	0.350129505269889
18	32546370	32549325	2	neutral	AA	100	somatic	0	0.564245809059855	0.766171234389472
18	32788680	32815275	2	neutral	AA	100	somatic	0	0.726268241293314	0.563550881380432
18	33051675	33158055	2	neutral	AA	100	somatic	0	0.445484378904726	0.834193251316066
18	35929845	36148515	2	neutral	AA	32.4659	somatic	0	0.115940330320196	0.0749597616772003
18	40267785	40270740	2	neutral	AA	100	somatic	0	0.47206317798784	0.698594115352501
18	41284305	41290215	1	loss	A	-1	germline	1	0.0204664757105826	0.0556870039440933
18	44395920	44401830	1	loss	A	-1	germline	1	0.0221185144183439	0.0562067143997433
18	45631110	45707940	2	neutral	AA	27.3367	somatic	0	0.143555019569073	0.388203606088948
18	49168245	49206660	2	neutral	AA	54.5678	somatic	0	0.537987807834104	0.693837727699694
18	57465885	57477705	2	neutral	AA	54.5678	somatic	0	0.437979497435434	0.92228923075053
18	65733975	65911275	2	neutral	AA	14.1234	somatic	0	0.377623630507595	0.560205432401471
18	66056070	66064935	1	loss	A	-1	germline	1	0.00565035473789414	0.00863871703493424
18	67111005	67176015	2	neutral	AA	100	somatic	0	0.883908613054947	0.933286837823554
18	70509255	70594950	2	neutral	AA	100	somatic	0	0.897806333740182	0.671961319768923
18	70772250	70931820	2	neutral	AA	22.2	germline	1	0.615778154749256	0.520166545415453
18	72772785	72778695	2	neutral	AA	100	germline	1	0.380477327295145	0.516091783645462
18	74637390	75139740	2	neutral	AA	20.3218	germline	1	3.07529160702175e-08	1.3329693116404e-05
18	77819925	77834700	2	neutral	AA	21.8308	somatic	0	0.768376060623815	0.643718066731331
18	78786210	78854175	2	neutral	AA	11.8752	germline	1	0.00912130126742318	0.0507745839605337
18	79474725	79486545	2	neutral	AA	7.78011	somatic	0	0.0868410208843682	0.157007635087017
19	2780655	2792475	2	neutral	AA	54.5678	somatic	0	0.22567424117889	0.400000075083612
19	2907720	2910675	1	loss	A	-1	somatic	0	0.0845279722358689	0.272224290334614
19	7449555	7452510	16	gain	AAAAAAAAAABBBBBB	15.0363	germline	1	0.0832652439353293	0.270038059494613
19	8885685	8921145	2	neutral	AA	1.02713	germline	1	0.0777170338159322	0.179605901885723
19	9751500	9798780	2	neutral	AA	21.8271	germline	1	0.0196535531578471	0.0791112572951199
19	12582390	12588300	0	loss	-	-1	germline	1	0.0147627428363661	0.0380094266630648
19	14018520	14021475	1	loss	A	-1	somatic	0	0.0833780780110941	0.270233977974055
19	17254245	17271975	2	neutral	AA	39.422	germline	1	0.999439579324631	0.860053540156431
19	22957395	22960350	0	loss	-	-1	germline	1	0.0832834346088489	0.270069652234634
19	24331470	24355110	4	gain	AABB	1.36569	germline	1	9.64749799561296e-07	2.25325387126496e-07
19	24355110	24390570	4	gain	AAAB	4.43545	germline	1	1.97754510738244e-09	7.56353868425208e-11
19	27336705	27342615	3	gain	AAB	1.72657	germline	1	0.0143172467001858	0.0366569888525435
19	27345570	27369210	5	gain	AAABB	0.299005	germline	1	9.64650501911581e-07	2.25282861476828e-07
19	27375120	27383985	4	gain	AABB	4.20727	germline	1	0.00270122894713147	0.00495922399678572
19	27383985	27386940	6	gain	AAAABB	1.10062	germline	1	0.0832797962166317	0.270063333470808
19	27386940	27392850	4	gain	AAAB	1.94384	germline	1	0.0143110447913438	0.0366390047508002
19	27392850	27398760	6	gain	AAAABB	1.34562	germline	1	0.0143107003103494	0.0366383132087704
19	29511585	29514540	0	loss	-	-1	germline	1	0.0832834346088489	0.270069652234634
19	29597280	29629785	2	neutral	AA	100	somatic	0	0.668067352933556	0.607937301736119
19	35525010	35572290	2	neutral	AA	18.4545	somatic	0	0.81464409699403	0.947957570980188
19	36349455	36355365	1	loss	A	-1	germline	1	0.0247762232345133	0.050978575558979
19	39050325	39124200	2	neutral	AA	92.5717	somatic	0	0.00130179360890614	0.00200998727467572
19	40693305	40752405	2	neutral	AA	36.3828	germline	1	0.0660672129926903	0.0803160434703608
19	46502835	46689000	2	neutral	AA	100	somatic	0	0.00583947576201738	0.0079948824441497
19	48710220	48730905	2	neutral	AA	54.5678	somatic	0	0.496703559511707	0.493099236137954
19	49253940	49274625	2	neutral	AA	30.0379	somatic	0	0.117385231698001	0.352656141676122
19	51632715	51644535	1	loss	A	-1	germline	1	0.00101079423267927	0.00144809109888711
19	56091810	56177505	2	neutral	AA	100	somatic	0	0.525486690530643	0.407296440322787
19	57131970	57188115	2	neutral	AA	100	somatic	0	0.0396694272947475	0.0735079807100756
19	57359505	57400875	2	neutral	AA	36.3786	somatic	0	0.183529393503478	0.362346343623036
19	58574010	58582875	2	neutral	AA	27.4248	germline	1	0.353360700854135	0.742151701885818
20	65010	67965	6	gain	-	-1	germline	1	0.0832790685536395	0.270062069730991
20	21305550	21308505	0	loss	-	-1	germline	1	0.0832666990707581	0.270040586814523
20	28781700	28787610	9	gain	-	-1	germline	1	0.0143084039573083	0.0366352014109581
20	28802385	29207220	9	gain	-	-1	germline	1	4.32494414810816e-08	4.12717315878552e-09
20	29207220	29260410	1	loss	A	-1	germline	1	0.000448839583372586	0.000293109824699211
20	29260410	29263365	3	gain	-	-1	germline	1	NA	NA
20	29263365	29266320	4	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
20	29287005	29390430	3	gain	-	-1	somatic	0	2.42732288930702e-06	8.99909983875791e-06
20	29408160	29411115	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
20	29889825	29892780	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
20	30152820	30167595	1	loss	A	-1	germline	1	0.00106512009219113	0.0013140675658142
20	31065915	31074780	32	gain	-	-1	germline	1	0.0143061079293215	0.0366313984165538
20	31166385	31169340	4	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
20	31184115	31187070	22	gain	-	-1	germline	1	0.0832652439353293	0.270038059494613
20	31187070	31190025	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
20	31240260	31243215	44	gain	-	-1	germline	1	0.0832652439353293	0.270038059494613
20	36721785	36724740	2	neutral	AA	100	germline	1	0.137370776055161	0.354128505149804
20	36792705	36839985	2	neutral	AA	27.2839	germline	1	0.156792644618385	0.0534300915187449
20	38036760	38045625	2	neutral	AA	54.5678	germline	1	0.19225930357977	0.288795888942875
20	38154960	38172690	2	neutral	AA	36.3786	germline	1	0.790713607625464	0.886287358002634
20	38914395	38917350	2	neutral	AA	100	somatic	0	0.838062790391632	0.91352343629598
20	43089810	43131180	2	neutral	AA	40.6269	somatic	0	0.959139541820401	0.918212311533745
20	43506465	43509420	2	neutral	AA	100	somatic	0	0.748474188066598	0.874035766197092
20	45007605	45010560	2	neutral	AA	100	somatic	0	0.980592679916339	0.959283449517361
20	45391755	45436080	2	neutral	AA	27.4591	somatic	0	0.375382674711118	0.404943908511663
20	46951995	46969725	2	neutral	AA	54.8569	somatic	0	0.0362936210930766	0.155453032725595
20	47401155	47702565	2	neutral	AA	100	somatic	0	3.03170250086615e-09	5.41998168568369e-09
20	48470865	48473820	2	neutral	AA	100	somatic	0	0.090151597243292	0.281803729752951
20	48949575	49756290	2	neutral	AA	22.4948	somatic	0	0.357788329244913	0.0405125941250465
20	51833655	51836610	2	neutral	AA	100	somatic	0	0.395515080241775	0.635128832767314
20	52932915	53003835	2	neutral	AA	100	somatic	0	0.251964889589613	0.160929491845853
20	53077710	53080665	2	neutral	AA	100	somatic	0	0.398138489122469	0.637457258445434
20	53807595	53840100	2	neutral	AA	30.7193	germline	1	0.306101499457609	0.407362547557386
20	53878515	53896245	2	neutral	AA	100	somatic	0	0.37870826047222	0.475228242648479
20	54097185	54100140	2	neutral	AA	100	somatic	0	0.728239298410764	0.863900929552663
20	56694630	56712360	2	neutral	AA	54.8347	somatic	0	0.523815274508601	0.723321726061626
20	57013770	57016725	2	neutral	AA	100	somatic	0	0.106848837139223	0.308860627873957
20	57530895	57533850	2	neutral	AA	100	somatic	0	0.571051498400707	0.770770835663014
20	58195770	58207590	2	neutral	AA	16.2083	somatic	0	0.116009332893298	0.255939972160124
20	58695165	58698120	2	neutral	AA	46.4511	germline	1	0.0933270405221488	0.287102045188488
20	59232975	59265480	2	neutral	AA	23.297	somatic	0	0.064482761618877	0.140741767631281
20	59812155	59821020	2	neutral	AA	54.5678	somatic	0	0.795037460016818	0.766660344036277
20	60125385	60143115	2	neutral	AA	54.5678	somatic	0	0.150195760119312	0.458229785557474
20	60964605	60970515	2	neutral	AA	15.6218	somatic	0	0.0779549153704359	0.122134172308891
20	61106445	61109400	2	neutral	AA	100	somatic	0	0.327244290367532	0.572374910316813
20	61328070	61363530	2	neutral	AA	100	somatic	0	0.00291754163860842	0.0150838382233696
20	61531965	61564470	2	neutral	AA	9.37829	somatic	0	0.0408370506721245	0.264373827509005
20	62235255	62238210	2	neutral	AA	100	somatic	0	0.594406281611285	0.786256276175591
20	63027195	63092205	2	neutral	AA	6.79722	somatic	0	0.000111470982268362	0.001789270980318
20	63310875	63313830	2	neutral	AA	100	somatic	0	0.331956694780042	0.57690514669324
20	63485220	63494085	2	neutral	AA	100	somatic	0	0.0267143572277909	0.156433145415746
20	63689115	63692070	2	neutral	AA	100	somatic	0	0.459641742467703	0.688731546630151
20	63692070	63695025	4	gain	AAAA	4.90863	somatic	0	0.0832812515580672	0.270065860963393
20	63999390	64023030	2	neutral	AA	70.5783	somatic	0	0.73140065388695	0.959398765470653
20	64023030	64043715	2	neutral	AA	97.2115	somatic	0	0.966318135134154	0.793429105529936
20	64043715	64046670	2	neutral	AA	100	somatic	0	0.288930412014537	0.534220529741006
20	64088040	64090995	4	gain	AAAA	6.26259	germline	1	0.0832812515580672	0.270065860963393
21	10652775	10655730	6	gain	AAAABB	14.966	germline	1	0.0832790685536395	0.270062069730991
21	10655730	10658685	5	gain	AAAAA	8.72686	germline	1	0.0832805238847742	0.270064597214943
21	10658685	10661640	6	gain	AAAABB	18.4263	germline	1	0.0832797962166317	0.270063333470808
21	10661640	10691190	4	gain	AAAB	36.6519	somatic	0	4.32816583187225e-08	4.12775746916338e-09
21	10691190	10694145	45	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBB	35.2589	germline	1	0.0832652439353293	0.270038059494613
21	10694145	10703010	4	gain	AABB	5.44627	germline	1	0.00270122894713147	0.00495915379346834
21	10703010	10708920	7	gain	AAAAABB	18.067	germline	1	0.0143098965498076	0.0366383132087704
21	10708920	10714830	4	gain	AAAA	1.84464	germline	1	0.0143110447913438	0.0366390047508002
21	10714830	10720740	6	gain	AAAABB	0.637104	germline	1	0.0143104706604167	0.0366379674420381
21	10720740	10729605	5	gain	AAABB	2.28424	germline	1	0.00270118710053194	0.0049590835910619
21	10729605	10732560	6	gain	AAAAAA	9.58888	germline	1	0.0832797962166317	0.270063333470808
21	10732560	10738470	4	gain	AAAA	1.97466	germline	1	0.0143110447913438	0.0366390047508002
21	10753245	10756200	12	gain	AAAAAAAABBBB	5.23245	germline	1	0.0832674266461974	0.27004185048097
21	15215295	15218250	0	loss	-	-1	germline	1	0.0832797962166317	0.270063333470797
21	17316300	17325165	2	neutral	AA	100	germline	1	0.138773245690464	0.405620279163193
21	20711595	20714550	2	neutral	AA	100	somatic	0	0.660044495024354	0.826734667275291
21	20859345	21080970	2	neutral	AA	39.1647	germline	1	0.474357775318969	0.173802079479803
21	25865115	25876935	2	neutral	AA	36.3786	somatic	0	0.17286410760343	0.33343215069132
21	27088485	27097350	2	neutral	AA	100	germline	1	0.164836383287529	0.26462451098761
21	27505140	27508095	2	neutral	AA	100	somatic	0	0.761472893142493	0.880246738708419
21	28557120	28560075	2	neutral	AA	100	somatic	0	0.201431779310753	0.437274780137759
21	29724345	29736165	2	neutral	AA	54.5678	somatic	0	0.521305460782185	0.652084673329627
21	30028710	30040530	2	neutral	AA	100	somatic	0	0.575291511016287	0.467379329148158
21	32165175	32256780	2	neutral	AA	100	somatic	0	0.318179925464408	0.342404680695597
21	35061075	35078805	2	neutral	AA	36.3789	somatic	0	0.226416793919656	0.436296981021477
21	36494250	36497205	3	gain	AAA	7.67411	somatic	0	0.0832863454153317	0.270074707323414
21	40858785	40864695	2	neutral	AA	36.3786	somatic	0	0.83341451525396	0.968037320618495
21	44401830	44407740	2	neutral	AA	23.1853	somatic	0	0.681603391279186	0.864943016838435
21	45332655	45394710	2	neutral	AA	73.3831	somatic	0	0.0648768683724575	0.148473583530704
21	45610425	45642930	2	neutral	AA	18.9098	somatic	0	0.0461533550099539	0.14200836810127
21	45967980	45970935	1	loss	A	-1	somatic	0	0.0834509398925904	0.270360432034636
22	11211270	11214225	8	gain	-	-1	germline	1	0.083273247435113	0.270051959967849
22	11619060	11622015	4	gain	AABB	29.9219	germline	1	0.0832812515580672	0.270065860963393
22	12691725	12694680	12	gain	AAAAAAAAAAAB	100	germline	1	0.0832674266461974	0.27004185048097
22	21612870	21657195	2	neutral	AA	30.2057	somatic	0	0.0175811189763793	0.0750199042456065
22	22901250	22904205	6	gain	AAAABB	6.67467	germline	1	0.0832797962166317	0.270063333470808
22	23291310	25191375	1	loss	A	-1	somatic	0	5.89006115799831e-234	0
22	25280025	25516425	3	gain	AAB	0.390188	germline	1	8.74727050351985e-36	0
22	32144490	32147445	1	loss	A	-1	somatic	0	0.0869426936003987	0.276369230294513
22	33358995	33364905	1	loss	A	-1	germline	1	0.0276258762386719	0.0566402117133767
22	34467120	34470075	1	loss	A	-1	germline	1	0.0854533821233798	0.273817826986236
22	34585320	34603050	2	neutral	AA	54.568	somatic	0	0.149724939079	0.217556981289128
22	35155635	35176320	2	neutral	AA	23.2757	somatic	0	0.0975074174547339	0.0908259397104936
22	36579945	36585855	2	neutral	AA	54.5777	somatic	0	0.0372310894666788	0.0874442081957011
22	39106470	39177390	2	neutral	AA	16.3596	somatic	0	0.0327063009868028	0.0385031501831575
22	39697470	39818625	2	neutral	AA	18.256	somatic	0	0.760366227021632	0.473171850784278
22	40383030	40391895	2	neutral	AA	54.5678	somatic	0	0.376390177871833	0.519453529622492
22	41928495	41984640	2	neutral	AA	21.8273	somatic	0	0.0894435921025234	0.13768101246872
22	47019960	47028825	2	neutral	AA	27.2839	somatic	0	0.0977895948611776	0.332525013662687
22	48527010	48547695	2	neutral	AA	18.7994	somatic	0	0.711057305536676	0.652892074233947
22	50642790	50645745	4	gain	AAAB	17.8229	germline	1	0.0832805238847742	0.270064597214943
X	3522360	3525315	2	gain	AA	9.22441	somatic	0	0.154689096274936	0.377955934519197
X	78269085	78272040	3	gain	AAA	72.1612	germline	1	0.0833161859334904	0.270126525965446
X	140723010	140725965	2	gain	AA	6.16164	germline	1	0.39522877997849	0.634896220578225
X	151538310	151544220	0	loss	-	-1	germline	1	0.0143062227230014	0.0366317441290412
X	155560065	155563020	0	loss	-	-1	germline	1	0.0832659715004687	0.270039323152404
Y	10655730	10658685	8	gain	-	-1	germline	1	0.083273247435113	0.270051959967849
Y	10661640	10759155	3	gain	-	-1	germline	1	1.35882105335181e-05	4.36268899182135e-05
Y	10759155	10765065	6	gain	-	-1	germline	1	0.0143103558366695	0.0366386589783577
Y	10765065	10809390	3	gain	-	-1	somatic	0	0.00507011251102449	0.000395307989901283
Y	10809390	10924635	2	gain	-	-1	somatic	0	0.000407403324807471	7.15887918945057e-08
Y	10924635	10927590	5	gain	-	-1	germline	1	0.0832805238847742	0.270064597214943
Y	10927590	10986690	2	gain	-	-1	germline	1	0.667296278771135	0.0631105430396083
Y	10986690	10989645	14	gain	-	-1	germline	1	0.0832666990707581	0.270040586814534
Y	10989645	10998510	2	gain	-	-1	germline	1	0.7588325310801	0.81325738521213
Y	10998510	11001465	6	gain	-	-1	germline	1	0.0832797962166317	0.270063333470808
Y	11004420	11010330	2	gain	-	-1	germline	1	0.0313934635525483	0.0608366214047744
Y	11013285	11016240	15	gain	-	-1	germline	1	0.0832652439353293	0.270038059494613
Y	11016240	11039880	2	gain	AB	16.1519	germline	1	0.8633349656479	0.954106302988323
Y	11291055	11305830	22	gain	AAAAAAAAAAAAAABBBBBBBB	53.7462	germline	1	0.000107517627453448	9.08052155703665e-05
Y	11305830	11335380	8	gain	AAAAABBB	1.707	germline	1	0.000107555542277062	9.08480748033069e-05
Y	11687025	11689980	3	gain	AAB	14.609	germline	1	0.0833482195377388	0.270182144287817
Y	11689980	11692935	5	gain	AAAAB	18.0745	germline	1	0.0832805238847742	0.270064597214943
Y	11716575	11719530	3	gain	AAB	9.08392	germline	1	0.083338754025586	0.270165710731815
Y	11719530	11725440	20	gain	AAAAAAAAAAAAABBBBBBB	53.4792	germline	1	0.0143064523127988	0.0366324355625891
Y	11725440	11746125	2	gain	AA	1.90225	germline	1	0.693535816877715	0.0796914818978864
Y	11746125	11749080	8	gain	AAAAABBB	44.5098	germline	1	0.0832747026838432	0.270054487382735
Y	22239330	22242285	0	loss	-	-1	somatic	0	0.0832666990707581	0.270040586814523
Y	26636370	26657055	3	gain	AAB	1.79377	germline	1	0.0575154717568505	0.0431847716023228
Y	56827605	56851245	16	gain	AAAAAAAAAAABBBBB	3.41057	germline	1	2.2094932558607e-05	1.22932965700429e-05
