chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	8144714	8150142	4	gain	-	-1	somatic	0	0.0143143877978731	0.036644655901041
1	72300960	72347098	1	loss	A	-1	germline	1	1.73451625690465e-11	1.4432899320127e-13
1	125080118	125082832	9	gain	-	-1	germline	1	0.0832764991608264	0.270057661125118
1	125082832	125085546	5	gain	-	-1	germline	1	0.0832884833296349	0.270078473836178
1	125085546	125088260	1	loss	A	-1	somatic	0	0.123515202487686	0.33415428982091
1	125150682	125164252	3	gain	-	-1	germline	1	0.000154485653197247	0.000276398427626168
1	125164252	125166966	8	gain	-	-1	germline	1	0.0832791621887284	0.270062286070842
1	152583794	152613648	1	loss	A	-1	germline	1	5.98389827426747e-08	4.69340932784945e-09
1	153300290	153351856	2	neutral	AA	36.3786	somatic	0	0.0214887708884164	0.120759504503665
1	163624346	163656914	2	neutral	AA	58.0998	somatic	0	0.16431031301072	0.138220729541028
1	165657132	165662560	2	neutral	AA	54.5678	somatic	0	0.342217648944847	0.533871750672088
1	177856562	177864704	2	neutral	AA	54.5678	somatic	0	0.230942845813533	0.395477644695988
1	178505208	178730470	2	neutral	AA	40.4839	somatic	0	0.163264759355423	0.253207298335456
1	182497502	182549068	2	neutral	AA	36.3786	somatic	0	0.913802432302342	0.946940892187567
1	182999592	183105438	2	neutral	AA	36.3786	germline	1	0.102839062960863	0.0840305235248859
1	183387694	183431118	2	neutral	AA	27.2851	somatic	0	0.69614740084612	0.830267914191093
1	185024236	185100228	2	neutral	AA	33.5377	somatic	0	0.301271394910535	0.581051736445545
1	187814228	187903790	2	neutral	AA	27.2844	germline	1	0.875770108743047	0.372632892705637
1	191122594	191494412	2	neutral	AA	10.9986	somatic	0	0.148368050951011	0.21535883628115
1	195804244	195842240	2	neutral	AA	24.8305	somatic	0	0.458508456097171	0.732240502273819
1	199777540	199875244	2	neutral	AA	100	somatic	0	0.643121053550207	0.554950773312874
1	200238920	200276916	2	neutral	AA	67.5557	somatic	0	0.792540819453587	0.421437975591691
1	202030160	202095296	2	neutral	AA	46.3175	somatic	0	5.1904086901116e-05	3.02316484408482e-05
1	202868786	202985488	2	neutral	AA	47.3518	somatic	0	0.0345021851627936	0.026361124138758
1	203777976	203935388	2	neutral	AA	100	somatic	0	1.60645414130603e-07	6.63140451107047e-07
1	204489044	204600318	2	neutral	AA	41.4634	somatic	0	0.808943346900147	0.799397953000388
1	213906624	214004328	2	neutral	AA	44.5199	somatic	0	0.0125781132327818	0.0509592614101699
1	215079072	215089928	2	neutral	AA	36.3786	somatic	0	0.0517007087332423	0.110627782009268
1	215665296	215673438	2	neutral	AA	54.5678	somatic	0	0.212176086827745	0.187696031650561
1	217945056	218078042	2	neutral	AA	44.3937	somatic	0	0.120266443180302	0.239658884587038
1	221456972	221508538	2	neutral	AA	36.3851	somatic	0	0.258152816008509	0.526506059181289
1	228133412	228255542	2	neutral	AA	33.4683	somatic	0	0.395720413346029	0.76492731506142
1	231335932	231398354	2	neutral	AA	61.9463	germline	1	0.177833296980359	0.315304198629508
1	234774570	234777284	4	gain	AAAB	17.8781	germline	1	0.0832904808269187	0.270081942735181
1	234777284	234782712	7	gain	AAAAABB	2.43629	germline	1	0.0143113406919779	0.0366392773658885
1	236090860	236096288	2	neutral	AA	100	somatic	0	0.0726524000783043	0.12188369231053
1	236096288	236099002	5	gain	AAABB	100	somatic	0	0.0832864858711564	0.270075004969697
1	236099002	236109858	2	neutral	AA	54.5678	somatic	0	0.0884943877609584	0.263746069387117
1	236525100	236725936	2	neutral	AA	86.5955	somatic	0	0.148339602669206	0.0227808929463656
1	246140802	246254790	2	neutral	AA	17.9284	somatic	0	0.296947081101986	0.0781814780550375
2	3178094	3183522	4	gain	AAAA	1.61039	germline	1	0.0143140725534848	0.0366440230963467
2	7960162	8036154	2	neutral	AA	100	somatic	0	0.00219334708896196	0.00244203477572724
2	15350384	15423662	2	neutral	AA	100	somatic	0	0.253869416012165	0.370849077007832
2	18292360	18297788	1	loss	A	-1	somatic	0	0.020836250536256	0.0568269152006705
2	34473228	34505796	1	loss	A	-1	germline	1	2.98299954451944e-08	2.95050495147109e-09
2	35751522	35767806	1	loss	A	-1	germline	1	7.39475230995235e-05	4.22858345859867e-05
2	37464056	37567188	2	neutral	AA	31.9291	somatic	0	0.447851929743404	0.918398243107969
2	39895800	39982648	2	neutral	AA	19.5171	somatic	0	0.310304921679151	0.630976601237262
2	52521328	52559324	1	loss	A	-1	germline	1	1.03894416735005e-08	1.88973725556707e-10
2	70040198	70327882	2	neutral	AA	3.33106	germline	1	1.40653291300487e-11	1.22710730465769e-11
2	74284894	74442306	2	neutral	AA	27.4003	somatic	0	0.325292120039586	0.163464360491598
2	86351338	86508750	2	neutral	AA	13.6885	somatic	0	0.15833054031286	0.158533490924164
2	88403122	89002916	2	neutral	AA	100	somatic	0	0.78948411184822	0.474840798894902
2	89773692	89789976	4	gain	-	-1	germline	1	0.000107649987799904	9.08753543414909e-05
2	89789976	89795404	3	gain	-	-1	germline	1	0.0151216292053876	0.0390214017966513
2	89795404	89806260	4	gain	AABB	3.50308	germline	1	0.000532558537112105	0.000671365690292136
2	89811688	89825258	5	gain	AAAAA	2.31462	germline	1	0.000107639644866405	9.08753543414909e-05
2	89825258	89841542	35	gain	AAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBB	43.1043	germline	1	2.20981634559292e-05	1.22928820941448e-05
2	89841542	89849684	4	gain	AABB	12.6774	germline	1	0.00270204518757344	0.00496016972258473
2	91410234	91415662	4	gain	-	-1	germline	1	0.0143137573152206	0.0366433903012133
2	92072450	95038852	2	neutral	AA	41.0779	germline	1	0.581065219775498	0.354717603084382
2	109197790	109200504	15	gain	AAAAAAAAAAAAAAB	13.0103	germline	1	0.0832711733119668	0.270048411407118
2	117041250	117046678	1	loss	A	-1	germline	1	0.0210435231987388	0.0575170415927225
2	121722900	121828746	2	neutral	AA	27.104	somatic	0	0.473188346074458	0.379624282850056
2	125685340	125696196	1	loss	A	-1	somatic	0	0.00113347085542556	0.00167608450974599
2	157610122	157642690	2	neutral	AA	27.2852	somatic	0	0.10324290630916	0.24176308285063
2	170680746	170775736	2	neutral	AA	23.5875	somatic	0	0.0111736967799274	0.00785892442387981
2	172040460	172045888	0	loss	-	-1	germline	1	0.0143094496726732	0.036641491973175
2	172045888	172078456	2	neutral	AA	62.4649	somatic	0	0.285760155944574	0.27617209449528
2	178548632	178757610	2	neutral	AA	100	somatic	0	4.7134825469376e-10	1.95180108741866e-08
2	180790396	180934238	2	neutral	AA	100	somatic	0	0.262956309564053	0.225717278085107
2	188698992	189570186	2	neutral	AA	16.9207	somatic	0	5.53658520076072e-07	3.27468311007717e-05
2	203316596	203327452	1	loss	A	-1	somatic	0	0.000823441502293686	0.00158234929410839
2	233138028	233219448	2	neutral	AA	11.0156	germline	1	0.0430350883337702	0.0551230342858724
2	239589206	239657056	2	neutral	AA	27.2839	somatic	0	0.00368950653629106	0.0266318440663367
2	241559570	241589424	2	neutral	AA	65.4463	germline	1	0.616203241539407	0.745596068388543
2	241589424	241594852	3	gain	AAB	4.80602	somatic	0	0.0201221952909044	0.0545862961303021
2	241594852	241689842	2	neutral	AA	37.0428	germline	1	0.0294049837598838	0.0200049015476356
3	184552	192694	1	loss	A	-1	somatic	0	0.00627850808133232	0.0100368001268145
3	16362706	16435984	2	neutral	AA	0.81613	somatic	0	0.676588205315575	0.798351602514646
3	21209910	21304900	3	gain	AAB	0.917419	germline	1	2.43692811796829e-21	0
3	32057768	32063196	1	loss	A	-1	germline	1	0.0226085777445851	0.062509703929806
3	41741320	42080570	2	neutral	AA	11.7504	somatic	0	3.10747280784667e-08	5.76886990399927e-08
3	45937164	46607522	2	neutral	AA	67.0364	somatic	0	2.32636790573925e-05	0.00132975530701507
3	52993564	53004420	1	loss	A	-1	somatic	0	0.000748553557778477	0.00119950930104962
3	56193370	56345354	2	neutral	AA	17.3234	somatic	0	0.372403010965383	0.396188785621619
3	68688626	68699482	1	loss	A	-1	germline	1	0.0207790643887801	0.0566484583475063
3	90669312	90712736	1	loss	A	-1	germline	1	8.28829298334211e-09	1.07030606599778e-10
3	95744492	95749920	1	loss	A	-1	somatic	0	0.0166827798773153	0.0438653442170712
3	99223840	99231982	1	loss	A	-1	somatic	0	0.0160131238426574	0.0415496220037224
3	100621550	100727396	4	gain	AAAB	1.00439	germline	1	5.61004794895408e-24	0
3	136888732	136962010	2	neutral	AA	100	somatic	0	0.636535019847463	0.639118966636349
3	146667274	146672702	0	loss	-	-1	germline	1	0.0143061934338837	0.0366316853156655
3	155704894	155710322	2	neutral	AA	100	somatic	0	0.719681094865524	0.778156063163383
3	162807432	162829144	1	loss	A	-1	germline	1	5.34114200385869e-06	1.53539248259893e-06
3	178554060	178687046	2	neutral	AA	54.0918	somatic	0	0.377119198996375	0.613550035177877
3	197383792	197389220	3	gain	AAB	2.532	somatic	0	0.0145062901561943	0.0372199954627791
4	6893560	6898988	1	loss	A	-1	somatic	0	0.0211542686769853	0.0578673821103263
4	31813508	31818936	1	loss	A	-1	somatic	0	0.0185727524254581	0.0497325957588333
4	40294758	40297472	4	gain	-	-1	somatic	0	0.0832904808269187	0.270081942735181
4	61073142	61078570	1	loss	A	-1	somatic	0	0.0208992844049114	0.0570578658421225
4	63200918	63203632	0	loss	-	-1	somatic	0	0.0832671791063937	0.270041474270371
4	121361938	121370080	1	loss	A	-1	somatic	0	0.00411150876207135	0.00950417199559017
4	131023778	131439020	3	gain	-	-1	germline	1	1.38807277984676e-94	0
4	172501840	172512696	1	loss	A	-1	germline	1	0.0206550987394587	0.0562838057893829
5	12810080	12820936	1	loss	A	-1	germline	1	0.00149141121625233	0.00158160067742108
5	16973356	17054776	2	neutral	AA	18.415	somatic	0	1.12527440775415e-06	5.84618576016105e-06
5	27981340	27997624	2	neutral	AA	54.5678	somatic	0	0.837426023988157	0.702013879729231
5	39339430	39404566	2	neutral	AA	21.8311	somatic	0	0.707203414272504	0.838876639282234
5	42940908	43030470	2	neutral	AA	100	somatic	0	0.619325273376158	0.396986875679972
5	45369938	45378080	1	loss	A	-1	germline	1	0.00548334628295426	0.00954376613256913
5	46268272	46276414	1	loss	A	-1	germline	1	0.0223901967900972	0.0617958311443025
5	46281842	46403972	2	neutral	AA	2.97296	somatic	0	0.00923542103378471	0.0555580973048068
5	46403972	46409400	1	loss	A	-1	germline	1	0.0206957195831194	0.0564074317797654
5	58768956	58891086	2	neutral	AA	69.6158	somatic	0	0.0234635124919881	0.0508267397217707
5	75082810	75131662	2	neutral	AA	27.2842	somatic	0	0.421566700974264	0.648172278735176
5	86918564	86923992	1	loss	A	-1	germline	1	0.0207029806294768	0.0564359585814427
5	91203970	91206684	0	loss	-	-1	somatic	0	0.0832698418928644	0.27004609901374
5	99006720	99012148	1	loss	A	-1	germline	1	0.0222384156924345	0.0613218254899939
5	113990714	114001570	1	loss	A	-1	germline	1	0.00105766385086171	0.00157603512836002
5	118536664	118544806	1	loss	A	-1	germline	1	0.00391266462293034	0.00956022986887051
5	120042934	120048362	1	loss	A	-1	germline	1	0.0149041515604923	0.0384214458336797
5	137518380	137521094	0	loss	-	-1	germline	1	0.0832818252856135	0.270066911074369
5	146100048	146287314	2	neutral	AA	49.5544	somatic	0	6.8734599227905e-09	3.08127634518485e-09
5	158256054	158323904	2	neutral	AA	54.5678	somatic	0	0.322028126179521	0.440151092547573
5	167516222	167524364	1	loss	A	-1	germline	1	0.00665167749485857	0.00953560219674232
5	177327332	177411466	2	neutral	AA	17.1699	somatic	0	0.675710193211628	0.757184707023512
5	178583914	178586628	5	gain	AAAAA	15.4596	germline	1	0.0832884833296349	0.270078473836178
5	180950522	181002088	1	loss	A	-1	germline	1	1.75015526177704e-12	3.5527136788005e-15
6	257830	382674	4	gain	AABB	0.504888	germline	1	6.8743975918725e-30	0
6	971612	998752	2	neutral	AA	21.9249	somatic	0	0.675495523965568	0.83028037093973
6	7018404	7118822	2	neutral	AA	100	somatic	0	4.21219604453051e-07	9.02942073555124e-07
6	7118822	7145962	2	neutral	AA	36.3786	somatic	0	0.511887405837512	0.142289409836389
6	27530816	27631234	2	neutral	AA	92.8336	somatic	0	0.00013914078409201	0.00133952261221293
6	32492008	32665704	1	loss	A	-1	somatic	0	3.97039225004969e-17	0
6	35786804	35797660	4	gain	AABB	3.93299	germline	1	0.000532614055445445	0.000671470043428712
6	36820838	36902258	2	neutral	AA	89.8711	germline	1	0.43800697815602	0.0925964675203131
6	37325642	37352782	2	neutral	AA	54.5681	somatic	0	0.288928253268894	0.251720063156921
6	38704354	38850910	2	neutral	AA	100	somatic	0	0.563358154685364	0.202667410530317
6	41657186	41684326	2	neutral	AA	36.3786	somatic	0	0.927357835212689	0.620537947269189
6	42528380	42731930	2	neutral	AA	59.2378	somatic	0	1.338719569076e-11	1.17176046643408e-10
6	43027756	43035898	2	neutral	AA	36.3787	somatic	0	0.0891136489518226	0.216549571735435
6	43470138	43641120	2	neutral	AA	18.2811	somatic	0	0.0103908139123007	0.014111504578547
6	45120250	45136534	2	neutral	AA	54.5678	somatic	0	0.462851826319713	0.284454374082075
6	54062880	54071022	1	loss	A	-1	germline	1	0.0144149466757948	0.0369358059212076
6	60231802	60239944	3	gain	-	-1	somatic	0	0.00270325181873127	0.00496351141132856
6	63447892	63545596	2	neutral	AA	16.9283	somatic	0	3.27449361532131e-05	5.41434058426438e-05
6	65344978	65475250	2	neutral	AA	18.2675	somatic	0	0.581563720185164	0.752058717113634
6	65608236	65697798	2	neutral	AA	59.4549	somatic	0	0.024575779186311	0.114826206822332
6	73856082	73872366	2	neutral	AA	36.3786	somatic	0	0.125385127471247	0.23754527002379
6	78486166	78497022	2	neutral	AA	54.5678	somatic	0	0.562080832781598	0.713944750797465
6	79482204	79590764	2	neutral	AA	28.1678	somatic	0	0.563181001515379	0.695834300855862
6	80529808	80562376	2	neutral	AA	54.5678	somatic	0	0.302162174315771	0.37079354049308
6	81827100	81846098	2	neutral	AA	54.5678	somatic	0	0.0819767478294333	0.0766213516486078
6	99845346	99875200	2	neutral	AA	60.2556	somatic	0	0.279500228284135	0.564943513227608
6	103289412	103313838	1	loss	A	-1	germline	1	5.36151743301611e-06	1.21398916896887e-06
6	118504096	118672364	2	neutral	AA	12.0235	somatic	0	0.434454038952069	0.840467092637117
6	128988278	129012704	2	neutral	AA	100	somatic	0	0.698830686477729	0.678997755553896
6	138848240	139013794	2	neutral	AA	100	somatic	0	0.0592339955131899	0.0159869263112691
6	139190204	139209202	2	neutral	AA	54.5678	somatic	0	0.114390255189401	0.285398895772846
6	146528860	146550572	2	neutral	AA	100	somatic	0	0.827718655488075	0.92611935623391
6	148396092	148450372	2	neutral	AA	8.78342	somatic	0	0.0275225329576383	0.024208201565235
6	149487120	149552256	2	neutral	AA	100	somatic	0	0.65823339048792	0.248770110280287
6	157308868	157311582	9	gain	AAAAAABBB	3.29492	germline	1	0.0832764991608264	0.270057661125118
6	157824528	158041648	2	neutral	AA	11.1168	somatic	0	0.0131681975989654	0.0741293962237347
6	158603446	158625158	2	neutral	AA	21.7321	somatic	0	0.184936653600804	0.225993961384348
6	159824746	159830174	2	neutral	AA	54.5678	somatic	0	0.941724423960362	0.967500642332672
6	163654200	163830610	2	neutral	AA	18.2696	somatic	0	0.00478215485111859	0.0602270414449079
6	165309740	165317882	1	loss	A	-1	somatic	0	0.00508985418845586	0.00970956600266382
6	165676130	165752122	2	neutral	AA	8.69413	germline	1	0.0335445943122903	0.190659778512656
6	167584072	167654636	2	neutral	AA	100	germline	1	0.659898775607831	0.174006649474157
6	168189294	168270714	2	neutral	AA	28.0825	somatic	0	0.0404170129569435	0.0300696751014299
7	903762	906476	4	gain	-	-1	somatic	0	0.0832891491577511	0.270079630132232
7	9762258	9764972	0	loss	-	-1	somatic	0	0.0832665134205539	0.270040318093563
7	57485234	57496090	3	gain	-	-1	somatic	0	0.000533221407809745	0.000672108087519829
7	61100282	62299870	2	neutral	AA	2.1589	germline	1	7.17235647298631e-07	3.08395439482245e-05
7	62299870	62446426	3	gain	AAB	0.495391	germline	1	1.64769528985144e-12	3.52051721108637e-13
7	62685258	62701542	1	loss	A	-1	somatic	0	0.000349059634261601	0.000267748483808838
7	97766422	97771850	1	loss	A	-1	somatic	0	0.0156873024408872	0.0405639378489019
7	100949944	100955372	3	gain	AAB	1.61037	germline	1	0.0143168048749871	0.0366503515735543
7	100955372	100960800	10	gain	AAAAAABBBB	2.91584	germline	1	0.014309659775044	0.0366392773658885
7	100960800	100971656	3	gain	AAB	0.640799	germline	1	0.000533306636856478	0.000673211502614013
7	109803012	109813868	1	loss	A	-1	somatic	0	0.000734968471775443	0.000867686231331377
7	152401956	152407384	10	gain	AAAAAAAABB	2.21962	germline	1	0.0143093446225083	0.03663643018574
7	152412812	152488804	2	neutral	AA	6.14084	germline	1	0.000778314691964168	0.000597606477704127
7	158150208	158152922	4	gain	AABB	30.317	somatic	0	0.083289814990179	0.270080786431899
8	24287586	24295728	1	loss	A	-1	somatic	0	0.00605184435763333	0.0103947702749696
8	32831258	32833972	0	loss	-	-1	germline	1	0.0832658477390251	0.270039161920367
8	39374712	39529410	1	loss	A	-1	germline	1	2.87797262818771e-33	0
8	42520238	42522952	0	loss	-	-1	germline	1	0.0832658477390251	0.270039161920367
8	43236734	43239448	4	gain	-	-1	somatic	0	0.0832918125133332	0.270084255352584
8	43239448	43242162	6	gain	-	-1	somatic	0	0.083285154253729	0.270072692410111
8	46612950	46629234	3	gain	AAB	12.3328	germline	1	2.21994220858995e-05	1.23631305920524e-05
8	50116724	50127580	1	loss	A	-1	germline	1	0.00124564198232873	0.00173712911951962
8	51696272	51959530	2	neutral	AA	56.5418	somatic	0	0.420217920266548	0.354698866218316
8	54638248	54681672	2	neutral	AA	27.2839	somatic	0	0.722100767618317	0.857839749125764
8	55631572	55696708	2	neutral	AA	29.6641	somatic	0	0.401858884566349	0.753314917655211
8	55908400	55913828	2	neutral	AA	100	somatic	0	0.0656226896594688	0.147126189581858
8	58030748	58128452	2	neutral	AA	36.3786	somatic	0	0.0547352522077762	0.148395754945748
8	58671252	58771670	2	neutral	AA	12.3869	germline	1	0.326019258904905	0.500941767592432
8	62454568	62468138	2	neutral	AA	100	somatic	0	0.713966961670739	0.855916310567038
8	63684010	63694866	2	neutral	AA	100	somatic	0	0.00875327414135357	0.0122995904554463
8	66487572	66539138	2	neutral	AA	100	somatic	0	0.372221515267263	0.870364132648012
8	66539138	66810538	2	neutral	AA	40.0126	somatic	0	1.17207326947811e-11	3.94639987355561e-10
8	82901844	82926270	2	neutral	AA	27.2839	somatic	0	0.378704354101118	0.200035458006345
8	91057414	91081840	2	neutral	AA	100	somatic	0	0.231677338238307	0.530404096137461
8	91692490	91706060	2	neutral	AA	27.618	somatic	0	0.370738916638943	0.325161020736956
8	96056602	96105454	2	neutral	AA	47.5566	somatic	0	0.00149069769173737	0.00448315824036505
8	98811312	98914444	2	neutral	AA	24.4329	somatic	0	0.587526987846895	0.229541555897151
8	107949350	107981918	2	neutral	AA	54.5678	somatic	0	0.67454594445735	0.884265489831292
8	109081088	109189648	2	neutral	AA	79.0954	somatic	0	0.0269232159863041	0.0974493753038616
8	115673394	115847090	2	neutral	AA	11.7173	somatic	0	0.000264659207638214	0.00150259814730003
8	135045926	135086636	2	neutral	AA	27.2839	germline	1	0.00941400577423592	0.0238410901092385
8	138321724	138723396	2	neutral	AA	21.3045	somatic	0	2.50954894294708e-10	4.23771684410212e-10
8	139591876	139594590	4	gain	AAAB	18.2828	somatic	0	0.0832951418048265	0.270090036959328
8	142221742	142522996	2	neutral	AA	12.2789	germline	1	8.18471242111479e-08	2.47331761541458e-05
8	144124256	144126970	5	gain	AAAAB	100	germline	1	0.0832884833296349	0.270078473836178
8	144162252	144219246	2	neutral	AA	100	somatic	0	1.79823950945952e-05	0.000143094617674366
9	13643278	13713842	2	neutral	AA	100	somatic	0	0.793013085493616	0.987098554284298
9	16875652	16913648	2	neutral	AA	79.508	somatic	0	0.00654578515599866	0.0171977027591725
9	25427466	25432894	2	neutral	AA	100	somatic	0	0.467411458402624	0.575044081168593
9	27289270	27354406	2	neutral	AA	36.3786	somatic	0	0.00557336506735513	0.0258199049277824
9	27783218	27807644	2	neutral	AA	54.5678	somatic	0	0.411523477655083	0.640823394990181
9	33284496	33319778	2	neutral	AA	54.5678	somatic	0	0.175528122585363	0.0232095743553573
9	34815192	34910182	2	neutral	AA	100	somatic	0	0.351417682765276	0.647875629642909
9	40880982	40883696	4	gain	AABB	37.3723	somatic	0	0.0832891491577511	0.270079630132232
9	40908122	40913550	5	gain	AAABB	2.08095	germline	1	0.0143135471597801	0.0366427575156411
9	40913550	40916264	7	gain	AAAAABB	3.18087	germline	1	0.083283156859925	0.270069223597833
9	40921692	40924406	6	gain	AAAABB	2.80122	germline	1	0.0832864858711564	0.270075004969697
9	40924406	40929834	7	gain	AAAAABB	1.59387	germline	1	0.0143119710807317	0.036640226468958
9	42387252	42389966	6	gain	AAAABB	11.3966	germline	1	0.083285154253729	0.270072692410111
9	69122866	69128294	1	loss	A	-1	somatic	0	0.0162551054404819	0.0397795202582034
9	69603244	69619528	2	neutral	AA	36.3963	somatic	0	0.167878831002083	0.0967731227024446
9	73766520	73820800	2	neutral	AA	49.1989	somatic	0	0.330877604908625	0.559069834661896
9	75085524	75107236	2	neutral	AA	27.3993	somatic	0	0.179396216694628	0.186539415967931
9	81352150	81357578	1	loss	A	-1	germline	1	0.0208943058644906	0.0570165324435687
9	83349654	83360510	2	neutral	AA	54.5678	germline	1	0.871401834687959	0.951205317337053
9	83382222	83444644	2	neutral	AA	21.9145	germline	1	0.193445264219228	0.340046840777257
9	84872208	84953628	2	neutral	AA	27.1754	somatic	0	0.192700236700986	0.575265309389597
9	87073262	87105830	2	neutral	AA	27.2885	somatic	0	0.653028146062139	0.954635477366935
9	92121302	92213578	2	neutral	AA	30.8788	somatic	0	0.0254538517085264	0.0579402092942286
9	98162666	98206090	2	neutral	AA	27.2839	somatic	0	0.69293897475115	0.708797040483505
9	99462672	99497954	2	neutral	AA	27.362	somatic	0	0.600506539966085	0.762469198391159
9	103012584	103015298	0	loss	-	-1	somatic	0	0.083285154253729	0.270072692410098
9	112742274	112896972	2	neutral	AA	6.54344	somatic	0	0.812308586256693	0.78367144568082
9	113138518	113176514	2	neutral	AA	54.5678	somatic	0	0.0359266812999795	0.0429942566025919
9	113282360	113298644	2	neutral	AA	54.5678	somatic	0	0.340287279791693	0.664821942056764
9	113808876	113876726	2	neutral	AA	54.5678	somatic	0	0.331043719353683	0.4498673866271
9	114471092	114490090	2	neutral	AA	13.6942	somatic	0	0.0917697046496846	0.267088670461873
9	116924548	116948974	2	neutral	AA	21.8956	somatic	0	0.936361386907592	0.15037631232413
9	120640014	120805568	2	neutral	AA	4.95179	somatic	0	0.383374541093796	0.347034234391749
9	124881996	124900994	2	neutral	AA	51.7471	somatic	0	0.567759659787125	0.352817813444841
9	126192858	126241710	2	neutral	AA	17.2963	somatic	0	0.252044603437898	0.183965609646082
9	128649028	128651742	0	loss	-	-1	germline	1	0.083285154253729	0.270072692410098
9	129425232	129441516	3	gain	AAB	0.291001	germline	1	2.50977446571964e-05	1.88752734915365e-05
9	129916466	129968032	2	neutral	AA	100	somatic	0	0.000347828268078775	0.000464643749123916
9	130619392	130991210	2	neutral	AA	31.6401	somatic	0	0.0158375299927902	0.023803083524389
9	134299576	134370140	2	neutral	AA	13.6999	somatic	0	0.0497039698754487	0.0770875405086077
9	136207518	136240086	2	neutral	AA	45.289	somatic	0	0.00645101800113874	0.00562588329385028
9	136769316	136780172	1	loss	A	-1	germline	1	0.00131032759823848	0.001619253119299
9	137325686	137328400	6	gain	AAAABB	12.0656	germline	1	0.0832838226535481	0.270070379864979
10	38484520	38525230	3	gain	-	-1	somatic	0	4.55575691966849e-10	1.40530254100213e-10
10	38525230	38527944	10	gain	-	-1	germline	1	0.0832751676727436	0.270055348673937
10	38576796	38582224	4	gain	-	-1	germline	1	0.0143135471597801	0.0366427575156411
10	39258010	39268866	1	loss	A	-1	somatic	0	0.00116390477157916	0.00160572051401375
10	39342144	39361142	1	loss	A	-1	germline	1	0.00027819115353455	0.000304752429173605
10	41828168	41841738	2	neutral	AA	37.4078	germline	1	0.0249163864353488	0.121223360655097
10	41858022	41915016	29	gain	AAAAAAAAAAAAAAAAAAABBBBBBBBBB	100	somatic	0	4.59449507291602e-06	1.66358526332289e-06
10	42300404	42322116	3	gain	AAB	1.64673	germline	1	1.01971211974872e-06	2.83700280045984e-07
10	46515246	46561384	4	gain	AABB	0.552515	germline	1	1.97869592742142e-11	1.87738713464114e-13
10	52600034	52648886	2	neutral	AA	54.5686	somatic	0	0.262257486954445	0.714046277403342
10	52974566	52985422	2	neutral	AA	54.5678	somatic	0	0.350721723425456	0.329389991482604
10	65545814	65556670	1	loss	A	-1	germline	1	0.0148152052594167	0.0381269572733717
10	67725156	67727870	0	loss	-	-1	somatic	0	0.083285820060287	0.270073848688085
10	68539356	68552926	2	neutral	AA	36.3786	somatic	0	0.250321878979899	0.310968397483164
10	76494090	76502232	1	loss	A	-1	somatic	0	0.020043412954064	0.0536646729381439
10	80953192	81010186	2	neutral	AA	36.3786	somatic	0	0.0239395215016518	0.124926058115549
10	86400190	86511464	2	neutral	AA	34.3106	somatic	0	5.58143373609684e-05	6.77777385266198e-05
10	88736944	88921496	2	neutral	AA	100	somatic	0	2.97391541203051e-06	2.42799375412828e-05
10	91399378	91575788	2	neutral	AA	46.4425	somatic	0	0.501961875829402	0.372185313852664
10	101631158	101848278	2	neutral	AA	45.2042	somatic	0	0.313819180619376	0.215210921336036
10	103376260	103465822	2	neutral	AA	52.5746	somatic	0	0.0281058243459845	0.00314049581375764
10	104301734	104326160	2	neutral	AA	21.8397	somatic	0	0.463498397541308	0.717299085029614
10	112346030	112468160	2	neutral	AA	100	somatic	0	0.442420215727087	0.428651804534131
10	116528304	116558158	2	neutral	AA	36.3786	somatic	0	0.389588016672243	0.707752384357759
10	132234222	133279112	2	neutral	AA	2.95794	somatic	0	1.03448897778635e-06	0.00014041996888936
11	16989640	17364172	2	neutral	AA	77.6699	somatic	0	5.99895679263581e-12	1.90414350953461e-11
11	18922008	18941006	3	gain	AAB	3.06612	germline	1	4.61126596240725e-06	1.66957858682704e-06
11	21421602	21435172	2	neutral	AA	54.5678	somatic	0	0.484646851804666	0.664488249597693
11	28985520	28990948	1	loss	A	-1	somatic	0	0.0194977132798787	0.0466250545926641
11	31371126	31376554	0	loss	-	-1	germline	1	0.0143153335677843	0.0366550985589686
11	32163614	32250462	2	neutral	AA	100	somatic	0	0.00279389415520465	0.0103328387415184
11	46308982	46327980	2	neutral	AA	36.3786	somatic	0	0.506241314504902	0.8531808466537
11	57653502	57699640	2	neutral	AA	27.3469	somatic	0	0.404970102330339	0.447981575471496
11	66425150	66498428	2	neutral	AA	93.0393	somatic	0	0.0235532856995538	0.0443028311914135
11	69065872	69263994	2	neutral	AA	16.5019	germline	1	0.00300837904877445	0.00909864575507757
11	71418910	71421624	3	gain	-	-1	somatic	0	0.0838827782708178	0.271109007134471
11	72547934	72572360	2	neutral	AA	18.1897	somatic	0	0.730517986231979	0.88101502935265
11	82144638	82152780	1	loss	A	-1	germline	1	0.00581999921457043	0.00956864680848657
11	87181822	87222532	2	neutral	AA	21.8271	somatic	0	0.915099269857981	0.937462953908414
11	90131940	90596034	2	neutral	AA	100	somatic	0	0.0344135454316005	0.0561931066104014
11	96561406	96566834	0	loss	-	-1	germline	1	0.0143064034940789	0.0366323179339413
11	104396724	104402152	1	loss	A	-1	somatic	0	0.0215683781747442	0.0472250834471406
11	111841226	111871080	2	neutral	AA	93.1918	somatic	0	0.847688304856202	0.969125644577395
11	118889484	118946478	2	neutral	AA	15.5909	somatic	0	0.297100942059673	0.314567253684042
11	122792216	122876350	2	neutral	AA	20.8169	somatic	0	0.308416369196388	0.356951248766796
11	123093470	123126038	2	neutral	AA	10.9566	somatic	0	0.0106720665210414	0.0104802858947587
11	125438366	126453402	2	neutral	AA	7.62678	somatic	0	0.891715531530543	0.0538633459620971
11	132055098	132060526	3	gain	AAB	6.90885	germline	1	0.0143188018624062	0.0366506680225146
11	132991428	132999570	2	neutral	AA	100	somatic	0	0.5990019350333	0.635127180136639
12	2255334	2258048	5	gain	-	-1	germline	1	0.0832891491577511	0.270079630132232
12	37616040	37624182	1	loss	A	-1	germline	1	0.00544804843566039	0.00820900110293432
12	48314628	48317342	0	loss	-	-1	germline	1	0.0832671791063937	0.270041474270371
12	52282496	52486046	2	neutral	AA	100	somatic	0	3.5731749196281e-11	9.88352193420639e-08
12	54402130	54423842	2	neutral	AA	23.0589	somatic	0	0.235082716305422	0.36307880063835
12	59542446	59553302	1	loss	A	-1	germline	1	0.000971991996026584	0.0013476793544287
12	60128670	60131384	0	loss	-	-1	somatic	0	0.0832651820618074	0.270038005750786
12	73234576	73240004	2	neutral	AA	100	somatic	0	0.961703518862506	0.999211428509959
12	89716698	89730268	2	neutral	AA	36.559	somatic	0	0.0073229462997801	0.0152793279447982
12	90091230	90096658	1	loss	A	-1	germline	1	0.0145891650208196	0.0372148638413593
12	96824664	96830092	1	loss	A	-1	germline	1	0.0212541504570898	0.0581713575089223
12	100613408	100618836	2	neutral	AA	100	somatic	0	0.593645121932492	0.547101559700994
12	110546648	110562932	2	neutral	AA	36.3786	somatic	0	0.196459669246965	0.331788377014372
12	114251258	114283826	2	neutral	AA	54.5678	somatic	0	0.0279052814474467	0.0202218504098509
12	117608476	117668184	2	neutral	AA	27.1505	somatic	0	0.0981899566274396	0.148599106079317
12	121095966	121123106	2	neutral	AA	54.5692	somatic	0	0.406677732356266	0.448344320580686
12	121739184	121769038	2	neutral	AA	100	somatic	0	0.470887179775106	0.755472861647535
12	130052166	130071164	2	neutral	AA	27.6839	somatic	0	0.554929566466849	0.856458990330078
12	130703526	130717096	2	neutral	AA	100	somatic	0	0.84517609758437	0.923623795466112
12	132155516	132158230	0	loss	-	-1	germline	1	0.0832924783630082	0.270085411666693
13	19111988	19141842	2	neutral	AA	84.3655	somatic	0	0.0865214617140857	0.270333830740526
13	19573368	19722638	2	neutral	AA	62.1128	somatic	0	0.244053512233569	0.378091986650067
13	19980468	20053746	2	neutral	AA	21.9315	somatic	0	0.35364287141252	0.222247949959512
13	21375464	21378178	4	gain	AAAB	9.38117	germline	1	0.0832938100752936	0.270087724305789
13	22018682	22024110	1	loss	A	-1	germline	1	0.0143254252104811	0.0366639610376954
13	22518058	22526200	3	gain	AAB	42.1858	germline	1	0.0171573622390238	0.0453102390196278
13	23058144	23063572	1	loss	A	-1	germline	1	0.0173279855965112	0.0457829065180325
13	31053588	31083442	2	neutral	AA	36.3786	somatic	0	0.380027833249004	0.840853217362154
13	33561324	33572180	1	loss	A	-1	germline	1	0.00119495129686924	0.00173372487792256
13	37496624	37510194	1	loss	A	-1	germline	1	0.000257109686694877	0.000267983297576269
13	38481806	38487234	1	loss	A	-1	germline	1	0.015096722071627	0.038817962912166
13	38983896	38989324	1	loss	A	-1	somatic	0	0.0394197596029487	0.108750577176881
13	39293292	39371998	2	neutral	AA	100	somatic	0	0.901139257305492	0.989466361183537
13	43396860	43418572	2	neutral	AA	8.18241	somatic	0	0.827069765380012	0.939341880013141
13	45418790	45429646	1	loss	A	20.5465	somatic	0	0.00186127939314185	0.00207106282136005
13	45429646	45432360	1	loss	A	-1	somatic	0	0.12534618099658	0.336844949354887
13	47465146	47565564	2	neutral	AA	21.9175	somatic	0	0.0655812442386578	0.0196488182837106
13	48575172	48656592	2	neutral	AA	27.1835	somatic	0	0.182818513000478	0.1893376746678
13	48957846	48963274	1	loss	A	-1	germline	1	0.0144587789352823	0.0370842163669975
13	51869968	52011096	2	neutral	AA	65.1669	somatic	0	0.000282199399834754	0.00161364749324833
13	52458906	52806298	2	neutral	AA	24.6522	somatic	0	0.490830277757632	0.391713803716941
13	54871652	54909648	2	neutral	AA	18.2732	somatic	0	0.711756098074362	0.566637280590609
13	54961214	54985640	2	neutral	AA	54.5678	somatic	0	0.736693186007046	0.685557094016686
13	55940968	55949110	2	neutral	AA	54.5678	somatic	0	0.354684675328189	0.609008055500043
13	56899010	56969574	2	neutral	AA	36.3786	somatic	0	0.120214925589613	0.360787172653704
13	63027222	63035364	3	gain	AAB	2.48913	germline	1	0.0170192097996096	0.0448852176829664
13	63035364	63043506	4	gain	AABB	2.53378	germline	1	0.00270250479854315	0.00496151900240005
13	63059790	63065218	3	gain	AAB	1.50595	germline	1	0.0143184865322687	0.0366569975037547
13	63065218	63067932	5	gain	AAABB	4.16488	germline	1	0.0832884833296349	0.270078473836178
13	64172530	64205098	2	neutral	AA	27.2843	somatic	0	0.885960655678342	0.736865344984977
13	69825792	69833934	1	loss	A	-1	somatic	0	0.00730135066633939	0.0109693525406769
13	70463582	70488008	2	neutral	AA	100	somatic	0	0.710640847563479	0.638674770377561
13	71902002	71907430	1	loss	A	-1	somatic	0	0.0295296528023421	0.0576312759091506
13	74341888	74350030	2	neutral	AA	54.5678	somatic	0	0.0570382494716063	0.0447866343983695
13	74808696	74811410	1	loss	A	-1	somatic	0	0.0905501296300777	0.28246815525795
13	82589734	82597876	1	loss	A	-1	germline	1	0.00643030789628399	0.00969689310386357
13	85778684	85784112	1	loss	A	-1	germline	1	0.0152821829586263	0.0381928478754769
13	87624204	87629632	1	loss	A	-1	somatic	0	0.0295258995733051	0.0568996380782143
13	89445298	89494150	2	neutral	AA	36.4259	somatic	0	0.230845826282899	0.15930236354178
13	90210646	90213360	1	loss	A	-1	germline	1	0.0833104579341594	0.27011663351391
13	91467228	91472656	2	neutral	AA	100	somatic	0	0.31406624609151	0.320780729347093
13	92851368	92856796	2	neutral	AA	100	somatic	0	0.976890152795143	0.949238820902614
13	93670996	93768700	2	neutral	AA	27.2887	somatic	0	0.126310412351661	0.131971277113152
13	94501480	94550332	2	neutral	AA	100	somatic	0	0.161234486963434	0.587280710277602
13	97720284	97769136	2	neutral	AA	21.9265	somatic	0	0.628168966363514	0.887154430114236
13	98168094	98195234	2	neutral	AA	54.5678	germline	1	0.344163720101986	0.622314522322035
13	102537634	102564774	2	neutral	AA	100	somatic	0	0.731626532451413	0.808441128126823
13	104776684	104809252	2	neutral	AA	100	somatic	0	0.971426065568363	0.648358501931207
13	107061872	107080870	2	neutral	AA	30.3174	somatic	0	0.226195331354234	0.266078678305628
13	109021380	109024094	1	loss	A	-1	germline	1	0.0833151198176086	0.270124728496911
13	109216788	109219502	1	loss	A	-1	germline	1	0.0833410970366974	0.270169832357937
13	113301358	113306786	2	neutral	AA	100	somatic	0	0.282510275422379	0.613738796245345
13	114123700	114153554	2	neutral	AA	21.0549	somatic	0	0.190193089614159	0.255071914395708
13	114153554	114156268	1	loss	A	-1	somatic	0	0.108231197839835	0.311011731969157
14	0	18487768	3	gain	AAB	-1	somatic	0	0.0833231121094299	0.270138606022593
14	18487768	18490482	2	neutral	AA	100	somatic	0	0.138326851473279	0.35548211505805
14	18490482	18658750	3	gain	AAB	-1	somatic	0	NA	NA
14	18658750	18661464	6	gain	AAAABB	22.6664	germline	1	0.083285820060287	0.270073848688097
14	18661464	18680462	3	gain	AAB	-1	germline	1	NA	NA
14	18680462	18694032	4	gain	AAAB	7.72315	germline	1	0.000532625159759258	0.000671516427481422
14	18694032	19728066	3	gain	AAB	-1	germline	1	NA	NA
14	19728066	19956042	3	gain	AAB	0.472651	germline	1	1.24369076979629e-29	0
14	20189446	20197588	2	neutral	AA	100	somatic	0	0.80612166043552	0.472992430389455
14	20903228	20927654	1	loss	A	-1	germline	1	0.000875903700500785	0.00140229643271383
14	22808456	22841024	2	neutral	AA	58.4748	somatic	0	0.0342676958288952	0.117475126661691
14	34348384	34351098	0	loss	-	-1	germline	1	0.0832738362019062	0.270053036237198
14	49763904	49799186	2	neutral	AA	23.9768	somatic	0	5.96355937061606e-05	2.20714029284252e-05
14	50960778	51017772	2	neutral	AA	100	somatic	0	0.202564939983125	0.193431395607052
14	56733456	56795878	2	neutral	AA	36.7215	somatic	0	0.845605730580337	0.720124150170678
14	59748710	59751424	1	loss	A	-1	somatic	0	0.0833291067358414	0.270149014508324
14	61298404	61333686	2	neutral	AA	36.3786	somatic	0	0.177024814844782	0.44235377780116
14	64775038	64992158	2	neutral	AA	100	somatic	0	0.568411552755379	0.310696107067202
14	79639616	79647758	1	loss	A	-1	germline	1	0.00548749965000167	0.00914380214532318
14	80551520	80673650	2	neutral	AA	34.763	somatic	0	0.441705747886029	0.187544222092347
14	102982730	103077720	2	neutral	AA	37.4024	somatic	0	0.0892567239572667	0.274277628359692
14	105319484	105371050	2	neutral	AA	13.8214	somatic	0	0.529013940070609	0.589366847388351
15	0	17024922	8	gain	-	-1	germline	1	NA	NA
15	17024922	17027636	6	gain	-	-1	germline	1	0.0832864858711564	0.270075004969697
15	17027636	17079202	8	gain	-	-1	germline	1	NA	NA
15	17079202	17081916	13	gain	-	-1	germline	1	0.0832711733119668	0.270048411407118
15	17081916	20338716	8	gain	-	-1	germline	1	0.106989173024885	0.0521170475563242
15	20338716	20344144	13	gain	-	-1	germline	1	0.0143082941582748	0.0366351648344787
15	20344144	20672538	8	gain	-	-1	germline	1	2.01113035754811e-13	4.44089209850063e-16
15	22224946	22246658	6	gain	AAAAAB	4.97226	germline	1	0.000532473419474311	0.000671319316000729
15	22246658	22271084	6	gain	AAAABB	3.52487	germline	1	0.00270168137954453	0.0049597842758502
15	25175064	25185920	1	loss	A	-1	germline	1	0.000968576856099576	0.00109693458910931
15	40343610	40487452	2	neutral	AA	18.931	somatic	0	0.908376682292174	0.71720265502792
15	46870780	47381012	2	neutral	AA	6.8174	somatic	0	4.85777473973903e-06	4.60803422763778e-05
15	52998992	53085840	2	neutral	AA	25.1744	somatic	0	8.3736480330406e-05	0.00163629446471625
15	55118626	55189190	2	neutral	AA	36.3786	somatic	0	0.230868831874253	0.183195825697423
15	55799840	55862262	2	neutral	AA	100	somatic	0	0.0341677692422755	0.166707999609479
15	64699046	64726186	2	neutral	AA	36.5473	somatic	0	0.000116497455815604	7.75385799726136e-05
15	65377546	65868780	2	neutral	AA	14.1658	somatic	0	3.10466915818206e-11	1.35472744133835e-11
15	68677770	68704910	2	neutral	AA	37.238	somatic	0	0.988974753396906	0.82279593978405
15	69310132	69562534	2	neutral	AA	40.1859	somatic	0	0.597887396356582	0.59666117575128
15	71416196	71421624	0	loss	-	-1	germline	1	0.0143064034940789	0.0366323179339413
15	74710992	74716420	1	loss	A	-1	somatic	0	0.0207809586725398	0.0566632343652854
15	75593042	75652750	2	neutral	AA	36.3786	somatic	0	0.00872442011649184	0.0396785692713704
15	75937720	75992000	2	neutral	AA	18.1644	somatic	0	0.613783788860262	0.337945870922728
15	76591794	76602650	1	loss	A	-1	germline	1	0.000835705261228211	0.00105299740315934
15	78494308	78803704	2	neutral	AA	8.03679	somatic	0	0.128234092376692	0.131275242610419
15	81932946	81946516	2	neutral	AA	67.1734	somatic	0	0.564655568769734	0.695288295368953
15	85610416	85699978	2	neutral	AA	13.6846	somatic	0	0.327915117352582	0.37047627529404
15	85732546	85737974	2	neutral	AA	54.5678	somatic	0	0.0501565740697141	0.0799656329548164
15	86392048	86402904	2	neutral	AA	36.7066	somatic	0	0.924854837173057	0.845896525338704
15	89572856	89646134	2	neutral	AA	66.509	somatic	0	0.117425148159968	0.285838282338942
15	90218788	90224216	2	neutral	AA	54.5678	somatic	0	0.329323797243815	0.314308663262409
15	92791660	92829656	2	neutral	AA	27.2839	somatic	0	0.00249993315359255	0.00479406605433386
15	99734072	99856202	2	neutral	AA	36.4566	somatic	0	0.878165889122379	0.687888682147445
15	101199632	101232200	2	neutral	AA	27.2839	somatic	0	0.177564869559924	0.182838824256175
15	101690866	101715292	2	neutral	AA	27.2839	somatic	0	0.666664912703071	0.947487380285739
16	1023178	1025892	6	gain	AAAABB	13.5053	germline	1	0.083285154253729	0.270072692410111
16	1389568	1411280	2	neutral	AA	27.2839	somatic	0	0.416374244570839	0.799402848791538
16	2087066	2344896	2	neutral	AA	100	somatic	0	0.0406784785267277	0.0260674966874344
16	21557302	21581728	4	gain	AABB	9.47785	germline	1	2.04006964753505e-07	3.05245314580205e-08
16	22135384	22224946	2	neutral	AA	21.8271	somatic	0	0.766385903338942	0.823703376181333
16	22615762	22699896	4	gain	AABB	4.47879	germline	1	2.4047545014408e-21	0
16	23600944	23622656	2	neutral	AA	27.2839	somatic	0	0.00139716284774851	0.00374739224770104
16	25327048	25332476	1	loss	A	-1	germline	1	0.0147975046985337	0.0381059980372341
16	34049844	34052558	2	neutral	AA	100	somatic	0	0.148736844977955	0.369896138165416
16	34060700	34066128	15	gain	AAAAAAAAAABBBBB	4.67092	germline	1	0.0143086092904019	0.03663706287571
16	34085126	34087840	12	gain	AAAAAAABBBBB	23.4058	germline	1	0.0832711733119668	0.270048411407118
16	34087840	34095982	2	neutral	AA	6.44965	germline	1	0.010218568113263	0.0289115182040491
16	34095982	34098696	12	gain	AAAAAAAABBBB	3.01521	germline	1	0.0832725047483139	0.270050723814937
16	34098696	34101410	4	gain	AAAA	2.58901	germline	1	0.083289814990179	0.270080786431899
16	34101410	34161118	2	neutral	AA	3.05133	somatic	0	0.0891872646427311	0.343929609273438
16	34161118	34212684	3	gain	AAB	1.0121	somatic	0	2.26650423472327e-05	1.32093737225114e-05
16	34218112	34959034	2	neutral	AA	0.7633	somatic	0	9.9501035756924e-25	0
16	35081164	35083878	2	neutral	AA	100	somatic	0	0.201156044330996	0.436929992935185
16	35233148	35523546	3	gain	AAB	3.7983	germline	1	8.37599747822622e-68	0
16	35993068	36088058	2	neutral	AA	2.85351	germline	1	0.0149350722994574	0.062961724412272
16	36123340	36126054	5	gain	-	-1	germline	1	0.0832864858711564	0.270075004969697
16	46401258	46403972	54	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBB	100	germline	1	0.0832671791063937	0.270041474270383
16	46403972	46466394	2	neutral	AA	0.438032	germline	1	9.26832458986131e-06	2.40146219476767e-05
16	46466394	46485392	2	neutral	AA	92.2079	somatic	0	0.00377036864132338	0.00446435555998159
16	55778128	55780842	0	loss	-	-1	germline	1	0.0832651820618074	0.270038005750786
16	78336896	78350466	1	loss	A	-1	germline	1	0.00018736808483648	0.000260421245066866
16	80942336	80950478	1	loss	A	-1	somatic	0	0.00459534158195857	0.00811284504756715
16	88959492	89081622	2	neutral	AA	6.63219	somatic	0	0.108343877543314	0.0331818132068656
17	7721330	7767468	2	neutral	AA	100	somatic	0	0.474740236163185	0.692655708749331
17	18292360	18357496	2	neutral	AA	48.4868	germline	1	0.379001887219224	0.313818425898929
17	21291330	21304900	4	gain	AABB	0.199528	germline	1	0.000107657376183661	9.08890870779944e-05
17	21674004	21855842	4	gain	-	-1	germline	1	2.04052077484822e-07	3.05731963079481e-08
17	21855842	21858556	6	gain	-	-1	germline	1	0.083285820060287	0.270073848688097
17	21858556	21931834	3	gain	-	-1	somatic	0	3.63216055115271e-19	0
17	21967116	21983400	15	gain	-	-1	germline	1	0.000532147869013409	0.000671052722098109
17	21983400	21988828	6	gain	AAAABB	-1	germline	1	NA	NA
17	21988828	22154382	6	gain	AAAABB	0.280928	germline	1	1.97842192071702e-09	7.56632534404389e-11
17	22157096	22159810	4	gain	AABB	4.86134	germline	1	0.083289814990179	0.270080786431899
17	22461064	26716616	2	neutral	AA	87.7974	somatic	0	0.129775780657727	0.122083526439981
17	26773610	26822462	3	gain	-	-1	germline	1	1.01120029860706e-10	2.2420953982305e-12
17	26822462	26833318	4	gain	-	-1	germline	1	0.000532639965846582	0.000671516427481422
17	26865886	26868600	7	gain	-	-1	germline	1	0.0832818252856135	0.270066911074382
17	26868600	26876742	3	gain	-	-1	germline	1	0.0461853517504449	0.139038963286621
17	50550964	50702948	2	neutral	AA	100	somatic	0	0.63258685379443	0.911693447946278
17	57610078	57612792	0	loss	-	-1	somatic	0	0.0832711733119668	0.270048411407105
17	59461026	60144954	2	neutral	AA	15.3838	somatic	0	3.82749775032804e-14	4.84057238736568e-14
17	69380696	69462116	2	neutral	AA	18.1922	somatic	0	0.0930352944158369	0.210012306534194
17	69969634	70013058	2	neutral	AA	27.2839	somatic	0	0.164504675753497	0.306030502691003
17	71212646	71247928	2	neutral	AA	33.2377	somatic	0	0.86125438948458	0.497926350241515
17	75981144	76152126	2	neutral	AA	70.8401	somatic	0	1.09145648109873e-05	4.63807553696682e-05
17	79501202	79533770	2	neutral	AA	100	somatic	0	0.0136173446855448	0.0560328120641911
17	81411858	81425428	2	neutral	AA	10.5139	somatic	0	0.339938946181564	0.421178660100959
17	82820424	82852992	2	neutral	AA	6.20998	somatic	0	0.239788801919564	0.506277928122198
18	5305870	5308584	0	loss	-	-1	somatic	0	0.0832864858711564	0.270075004969685
18	26181958	26187386	1	loss	A	-1	somatic	0	0.0271881524055981	0.0555233291595195
18	29593456	29598884	1	loss	A	-1	germline	1	0.0266351598125447	0.0639827138665092
18	41347790	41350504	1	loss	A	-1	germline	1	0.0846476708005014	0.272430872668137
18	47066188	47199174	2	neutral	AA	100	somatic	0	0.112543286625586	0.0352497695880392
18	51430300	51449298	2	neutral	AA	54.5678	somatic	0	0.936562307899031	0.715697668159524
18	51449298	51452012	1	loss	A	-1	somatic	0	0.103720345408344	0.303927212858649
18	51452012	51465582	2	neutral	AA	54.5679	somatic	0	0.547647377944229	0.879393327256866
18	53378952	53465800	2	neutral	AA	43.2388	somatic	0	0.230278730270892	0.473936364062288
18	56261220	56263934	1	loss	A	-1	somatic	0	0.0990877107335821	0.296516141149078
18	57278970	57281684	0	loss	-	-1	germline	1	0.0832938100752936	0.270087724305777
18	57759348	57770204	2	neutral	AA	54.5678	somatic	0	0.381750650857421	0.717359564363234
18	58264152	58269580	1	loss	A	-1	germline	1	0.0280206759546979	0.0547923437514443
18	63890274	63911986	2	neutral	AA	34.3166	somatic	0	0.018173179994642	0.0711050521414889
18	64544348	64547062	1	loss	A	-1	somatic	0	0.120199330698029	0.329240482903157
18	66056046	66064188	1	loss	A	-1	germline	1	0.00598446987638006	0.00933469367789441
18	66237884	66246026	1	loss	A	-1	somatic	0	0.00686262697629059	0.0102758879821407
18	78472596	78480738	2	neutral	AA	9.92143	germline	1	0.306143923291051	0.311034634894376
18	79520200	79522914	1	loss	A	-1	germline	1	0.0854610176458581	0.273830999133751
19	3384358	3465778	2	neutral	AA	27.5481	somatic	0	0.000820202720048149	0.000358118654569917
19	7449930	7452644	12	gain	AAAAAAAABBBB	25.8245	germline	1	0.0832718390279848	0.270049567609221
19	8405258	8497534	2	neutral	AA	13.6757	somatic	0	0.000611795090497546	0.000549112837677113
19	8885636	8918204	2	neutral	AA	1.33007	germline	1	0.931452478575331	0.918780468094185
19	13933676	14031380	2	neutral	AA	22.8371	somatic	0	2.24428231346765e-08	5.51999501663403e-09
19	17236614	17290894	2	neutral	AA	15.3741	somatic	0	0.00266407352175988	0.00473658533081323
19	20542266	21587156	2	neutral	AA	0.354297	germline	1	3.16578284428694e-11	2.48141795999857e-09
19	23622656	23625370	0	loss	-	-1	germline	1	0.0832658477390251	0.270039161920367
19	23625370	23755642	2	neutral	AA	100	somatic	0	1.71742601954236e-07	6.18681789132935e-08
19	23877772	23883200	1	loss	A	-1	somatic	0	0.0192407627972107	0.050283251791621
19	24331010	24352722	3	gain	AAB	0.707737	germline	1	9.66209304295568e-07	2.2556841028365e-07
19	24352722	24388004	4	gain	AABB	0.508804	germline	1	4.25292698122706e-10	1.02483577180124e-11
19	24388004	24404288	4	gain	AABB	1.73562	germline	1	0.00270196859268955	0.00496010547955561
19	24415144	24420572	3	gain	AAB	3.32137	germline	1	0.0154720098779282	0.0401488085481115
19	27338122	27340836	5	gain	AAABB	2.13147	germline	1	0.0832884833296349	0.270078473836178
19	27346264	27378832	6	gain	AAAABB	0.171008	germline	1	4.3299387613564e-08	4.12943235161833e-09
19	27378832	27392402	5	gain	AAABB	0.495151	germline	1	0.00010764629378744	9.08792777792877e-05
19	27392402	27397830	6	gain	AAAABB	0.776733	germline	1	0.0143124964234041	0.0366411755935382
19	27397830	27400544	4	gain	AAAB	5.92192	germline	1	0.083289814990179	0.270080786431899
19	29512036	29514750	0	loss	-	-1	germline	1	0.0832711733119668	0.270048411407105
19	29916422	30052122	2	neutral	AA	25.7585	somatic	0	0.627411507118474	0.935121087047128
19	31330416	31466116	2	neutral	AA	21.8271	somatic	0	0.124775372199433	0.135291544695954
19	32500150	32508292	2	neutral	AA	54.8373	somatic	0	0.0407288187185103	0.108382310333358
19	33284496	33365916	2	neutral	AA	100	somatic	0	0.573837962359092	0.126468289942223
19	34391808	34394522	5	gain	AAABB	3.39428	germline	1	0.0832891491577511	0.270079630132232
19	35162584	35187010	2	neutral	AA	36.3786	somatic	0	0.732793669640519	0.56409476288529
19	35360706	35368848	1	loss	A	-1	germline	1	0.00587695498871906	0.00884649405184579
19	35827514	35849226	2	neutral	AA	45.8171	somatic	0	0.052854340087536	0.137762556653177
19	44759288	44856992	2	neutral	AA	9.09467	somatic	0	9.59337003756935e-07	2.32129142901938e-05
19	52423624	52477904	2	neutral	AA	42.9128	somatic	0	0.00669741563263241	0.00851752097217851
19	53962462	54019456	2	neutral	AA	66.3996	somatic	0	0.000373950432171598	0.00143278288512938
19	58326574	58578976	2	neutral	AA	4.77722	germline	1	0.103748733139678	0.0990739756513046
20	59708	62422	7	gain	-	-1	somatic	0	0.0832838226535481	0.270070379864979
20	65136	67850	4	gain	-	-1	somatic	0	0.0832891491577511	0.270079630132232
20	2898552	2903980	2	neutral	AA	36.3786	somatic	0	0.179915505416599	0.411391421801043
20	7010262	7015690	2	neutral	AA	100	somatic	0	0.813434504327122	0.714848851195654
20	7281662	7620912	2	neutral	AA	29.7419	somatic	0	1.05863587035307e-06	7.30175882746043e-06
20	12207572	12242854	2	neutral	AA	88.8842	somatic	0	0.0114015558446894	0.0229423323785527
20	22081104	22083818	1	loss	A	-1	germline	1	0.0833504237923971	0.27018602482822
20	24917234	24955230	2	neutral	AA	36.3786	somatic	0	0.0159416081239402	0.0635100547111086
20	28781970	28787398	10	gain	-	-1	germline	1	0.0143094496726732	0.0366376955752397
20	28803682	28822680	11	gain	-	-1	germline	1	4.59648336028562e-06	1.66474201712674e-06
20	28836250	28838964	3	gain	-	-1	germline	1	0.0832991370969109	0.270096975006669
20	29205354	29262348	3	gain	-	-1	somatic	0	0.0013461766187519	0.00548236002233427
20	29262348	29265062	27	gain	-	-1	germline	1	0.08326917618978	0.27004494282249
20	29265062	29270490	4	gain	-	-1	germline	1	0.0143138623939615	0.0366433903012133
20	29270490	29376336	3	gain	-	-1	germline	1	2.3694564005134e-10	1.14823373031925e-10
20	29408904	29411618	5	gain	-	-1	germline	1	0.0832884833296349	0.270078473836178
20	29875712	29894710	5	gain	-	-1	germline	1	0.00270156650209796	0.00495984851506592
20	31164862	31167576	6	gain	-	-1	germline	1	0.0832864858711564	0.270075004969697
20	31167576	31183860	3	gain	-	-1	somatic	0	3.282811737428e-05	4.77484601876244e-05
20	31183860	31189288	20	gain	-	-1	germline	1	0.0143076639123877	0.036634215846126
20	31189288	31240854	3	gain	AAB	2.3811	germline	1	3.55495909931607e-06	2.62559126140705e-05
20	31240854	31243568	55	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	23.7171	germline	1	0.0832671791063937	0.270041474270383
20	31243568	31246282	3	gain	AAA	7.54442	germline	1	0.0833444279238268	0.270175615301742
20	37192656	37246936	2	neutral	AA	78.4529	somatic	0	0.342073803388914	0.565019601885648
20	43643834	43646548	0	loss	-	-1	germline	1	0.0832911466679701	0.270083099042063
20	43768678	43931518	2	neutral	AA	93.7162	somatic	0	0.864688174203952	0.452780128128194
20	47307734	47391868	2	neutral	AA	100	somatic	0	0.000104273419468953	0.000656759556197484
20	51460154	51487294	2	neutral	AA	36.3786	somatic	0	0.262823490156112	0.298188359557907
20	52369344	52426338	2	neutral	AA	33.9821	somatic	0	0.382205734006524	0.218151603688418
20	53520080	53536364	2	neutral	AA	21.8298	somatic	0	0.0509778038710558	0.0178866837753838
20	61290262	61306546	2	neutral	AA	21.8271	somatic	0	0.0045591280405925	0.00899656908148849
21	10519464	10522178	3	gain	AAA	100	germline	1	0.0832958076760608	0.270091193291517
21	10652450	10679590	6	gain	AAAABB	25.0733	somatic	0	4.33014120876598e-08	4.12943235161833e-09
21	10679590	10690446	5	gain	AAAAB	14.8543	germline	1	0.00270189199978966	0.00495991275504437
21	10690446	10693160	56	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBB	100	germline	1	0.0832671791063937	0.270041474270383
21	10693160	10704016	5	gain	AAAAA	2.41795	germline	1	0.000532547434092556	0.000671365690292136
21	10704016	10709444	8	gain	AAAAABBB	7.75297	germline	1	0.0143108153867265	0.0366405428414278
21	10709444	10723014	5	gain	AAABB	2.52528	germline	1	0.000107640383616273	9.08753543414909e-05
21	10723014	10731156	4	gain	AAAB	11.6909	germline	1	0.00270193029599161	0.00495997699578532
21	10731156	10733870	7	gain	AAAAABB	15.3584	germline	1	0.083283156859925	0.270069223597833
21	10733870	10739298	5	gain	AAAAB	6.51802	germline	1	0.0143135471597801	0.0366427575156411
21	10752868	10755582	14	gain	AAAAAAAAAABBBB	9.4017	germline	1	0.0832711733119668	0.270048411407118
21	14096516	14104658	2	neutral	AA	54.5678	germline	1	0.0554491991040274	0.111516531981993
21	14815726	14821154	2	neutral	AA	54.5678	somatic	0	0.22328441009853	0.319535423097193
21	15524080	15526794	2	neutral	AA	100	somatic	0	0.106645955262224	0.308543033167329
21	16324710	16327424	2	neutral	AA	54.5678	germline	1	0.354571457414593	0.59825599254022
21	16853940	16862082	2	neutral	AA	54.5678	germline	1	0.742784496432981	0.958570288774886
21	17022208	17049348	2	neutral	AA	67.5658	somatic	0	0.771734278564422	0.98452141271263
21	17991106	18012818	2	neutral	AA	36.3786	germline	1	0.774754929110231	0.742951260058548
21	19437668	19445810	2	neutral	AA	54.5681	somatic	0	0.878200335422499	0.680574678968389
21	20585690	20588404	1	loss	A	-1	somatic	0	0.0833817412272744	0.27024039044453
21	21068782	21087780	2	neutral	AA	36.3824	somatic	0	0.872828620275494	0.901855632934246
21	21573586	21579014	2	neutral	AA	54.5678	somatic	0	0.710282555707786	0.711253679280978
21	22667328	22675470	2	neutral	AA	36.5135	somatic	0	0.242929763235171	0.444666104769385
21	22879020	22906160	2	neutral	AA	76.7254	somatic	0	0.532534074313924	0.473796163326215
21	24347294	24355436	2	neutral	AA	54.5678	somatic	0	0.130606122692688	0.198128203093447
21	25913272	25945840	2	neutral	AA	36.3786	somatic	0	0.458661722601477	0.697094949911767
21	28168606	28176748	2	neutral	AA	54.5678	somatic	0	0.333298899011951	0.722233845821028
21	29867570	29872998	2	neutral	AA	54.5678	germline	1	0.281572345981163	0.274065688465127
21	30087404	30090118	2	neutral	AA	100	somatic	0	0.30592171712317	0.551427031335013
21	33189506	33197648	2	neutral	AA	70.1674	somatic	0	0.509761834511742	0.74331907412887
21	33884290	34030846	2	neutral	AA	13.9899	somatic	0	0.156975081742053	0.177664085112399
21	34733772	34739200	2	neutral	AA	54.5678	somatic	0	0.0190823353420122	0.0505082470907269
21	35767806	35770520	1	loss	A	-1	somatic	0	0.108838647368836	0.311956399642761
21	36310606	36497872	2	neutral	AA	13.0155	somatic	0	0.000386402626632146	0.00168564844987706
21	37602470	37797878	2	neutral	AA	10.0671	somatic	0	0.0161871689713022	0.0263404953368499
21	42536522	42541950	2	neutral	AA	54.5678	somatic	0	0.895094383849478	0.65975529074552
21	42759070	42769926	2	neutral	AA	12.4797	somatic	0	0.0309763584043616	0.0602465472384522
21	43782248	43793104	2	neutral	AA	36.3789	somatic	0	0.319339785625311	0.549879120002797
21	44278910	44287052	2	neutral	AA	54.5678	somatic	0	0.51255896288454	0.882902205110895
21	44531312	44553024	2	neutral	AA	7.4485	somatic	0	0.65320248943294	0.830127744981449
21	45307516	45312944	2	neutral	AA	54.5695	germline	1	0.303434313389849	0.731095423308199
22	11211534	11214248	6	gain	-	-1	germline	1	0.083285820060287	0.270073848688097
22	11626776	11629490	4	gain	AABB	25.2885	germline	1	0.083289814990179	0.270080786431899
22	17860834	17887974	2	neutral	AA	2.28393	somatic	0	0.0207880355172289	0.0896937851360031
22	19999466	20015750	2	neutral	AA	36.3786	somatic	0	0.608038386519241	0.565917227159904
22	20596546	20599260	1	loss	A	-1	somatic	0	0.0851890899526349	0.273364099038037
22	23603658	23655224	2	neutral	AA	55.3752	somatic	0	0.344338268318666	0.440310144950064
22	28866104	28885102	2	neutral	AA	32.4476	somatic	0	0.00478611984074203	0.0299651671002453
22	30784902	30793044	2	neutral	AA	36.3786	somatic	0	0.997467179560251	0.920746569261619
22	31905784	31916640	2	neutral	AA	36.3786	somatic	0	0.881932097208657	0.964376438083169
22	34467800	34470514	1	loss	A	-1	germline	1	0.0833224460613922	0.270137449542233
22	36381170	36470732	2	neutral	AA	18.1917	somatic	0	0.00174222445134368	0.00381080655037835
22	37325642	37477626	2	neutral	AA	100	somatic	0	0.00704301685081702	0.0311980185620644
22	37477626	37670320	2	neutral	AA	34.1796	somatic	0	0.00294444843973785	0.00521173988369306
22	38215834	38248402	2	neutral	AA	15.591	germline	1	0.808725466380302	0.730871511176302
22	38650074	38707068	2	neutral	AA	18.1898	somatic	0	0.000245698818492074	0.000159007676200029
22	41252800	41418354	2	neutral	AA	23.2368	somatic	0	0.0002458842933879	0.00064784339390811
22	44935698	44989978	2	neutral	AA	100	somatic	0	0.00318756861076775	0.0161308023245732
22	46159712	46167854	2	neutral	AA	54.5678	somatic	0	0.0698465840205243	0.254384976675743
22	47600846	47625272	2	neutral	AA	27.5222	somatic	0	0.96710930675622	0.964251442646691
22	48170786	48176214	2	neutral	AA	54.5678	somatic	0	0.0517769413324647	0.124366073514225
22	50333844	50350128	1	loss	A	-1	somatic	0	0.00168769761217233	0.00171766011010066
22	50643240	50645954	5	gain	AAABB	33.2867	germline	1	0.0832891491577511	0.270079630132232
22	50700234	50711090	2	neutral	AA	36.3786	somatic	0	0.657074941906887	0.987573552581959
X	49139684	49142398	2	gain	AB	1.27125	germline	1	0.326140629977174	0.571286198277158
X	78269046	78271760	2	gain	AA	100	somatic	0	0.144052985921705	0.363466428208846
X	79666756	79672184	0	loss	-	-1	germline	1	0.014317645681849	0.0366661769502841
X	125272812	125275526	0	loss	-	-1	germline	1	0.0832651820618074	0.270038005750786
Y	10655164	10657878	8	gain	-	-1	germline	1	0.0832791621887284	0.270062286070842
Y	10660592	10752868	3	gain	-	-1	germline	1	2.22158880452656e-05	1.23618499198175e-05
Y	10752868	10755582	6	gain	-	-1	germline	1	0.083285820060287	0.270073848688097
Y	10755582	10758296	2	gain	-	-1	germline	1	0.0869852191751952	0.27644223682591
Y	10758296	10763724	7	gain	-	-1	germline	1	0.0143119710807317	0.0366424411264401
Y	10763724	10774580	3	gain	-	-1	germline	1	0.000533221407809745	0.000672479574676643
Y	10774580	10777294	6	gain	-	-1	germline	1	0.083285154253729	0.270072692410111
Y	10777294	10780008	2	gain	-	-1	germline	1	0.28333970095043	0.52847404115068
Y	10780008	10793578	3	gain	-	-1	germline	1	0.00011050365004673	9.83415654846054e-05
Y	10793578	10801720	5	gain	-	-1	germline	1	0.00270175796698868	0.00495984851506592
Y	10801720	10807148	2	gain	-	-1	germline	1	0.445023981099497	0.660954876252067
Y	10807148	10809862	5	gain	-	-1	germline	1	0.0832884833296349	0.270078473836178
Y	10812576	10820718	2	gain	-	-1	germline	1	0.0350397704931063	0.0686015699802416
Y	10820718	10826146	4	gain	-	-1	germline	1	0.0143162793928168	0.0366503515735543
Y	10826146	10845144	2	gain	-	-1	germline	1	0.712928218454128	0.528655015127484
Y	10845144	10847858	4	gain	-	-1	germline	1	0.0832904808269187	0.270081942735181
Y	10847858	10883140	2	gain	-	-1	germline	1	0.180982714423427	0.223243807466175
Y	10883140	10896710	3	gain	-	-1	germline	1	0.00270380741758974	0.00496434715589944
Y	10923850	10929278	4	gain	-	-1	germline	1	0.0143147030483857	0.0366459215391131
Y	10929278	10934706	2	gain	-	-1	germline	1	0.0489560208669114	0.102748751086677
Y	10934706	10937420	5	gain	-	-1	germline	1	0.0832884833296349	0.270078473836178
Y	10937420	10986272	2	gain	-	-1	germline	1	0.0481895259724674	0.0166284946652749
Y	10986272	10988986	16	gain	-	-1	germline	1	0.08327050760026	0.270047255208628
Y	10988986	10999842	3	gain	-	-1	germline	1	0.0674833234542375	0.0228525039681856
Y	10999842	11002556	9	gain	-	-1	germline	1	0.0832764991608264	0.270057661125118
Y	11013412	11016126	16	gain	-	-1	germline	1	0.08327050760026	0.270047255208628
Y	11016126	11040552	2	gain	AA	39.7446	germline	1	0.0797221140697705	0.0510331868456804
Y	11290240	11306524	30	gain	AAAAAAAAAAAAAAAAAAABBBBBBBBBBB	5.60486	germline	1	2.20984641676156e-05	1.22928820941448e-05
Y	11306524	11317380	5	gain	AAABB	0.893079	germline	1	0.0143134420830806	0.0366424411264401
Y	11320094	11322808	6	gain	AAAABB	2.14994	germline	1	0.0832844884514828	0.270071536135738
Y	11330950	11333664	12	gain	AAAAAAAABBBB	9.88354	germline	1	0.0832711733119668	0.270048411407118
Y	11686484	11689198	4	gain	AAAB	70.4533	germline	1	0.0832938100752936	0.270087724305789
Y	11689198	11691912	8	gain	AAAAAABB	28.3413	germline	1	0.083280493728548	0.270064598565385
Y	11716338	11719052	4	gain	AAAA	7.95339	germline	1	0.083293144216995	0.270086567984441
Y	11721766	11724480	43	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBB	100	germline	1	0.0832685104910068	0.270043786634841
Y	11724480	11743478	2	gain	AA	11.5713	germline	1	0.985409249793254	0.622759483489913
Y	11743478	11746192	3	gain	AAB	4.23928	germline	1	0.0832951418048265	0.270090036959328
Y	11746192	11748906	12	gain	AAAAAAAABBBB	4.97509	germline	1	0.0832718390279848	0.270049567609221
Y	26637910	26640624	7	gain	AAAABBB	4.57021	germline	1	0.0832818252856135	0.270066911074382
Y	26640624	26656908	2	gain	AA	4.32293	germline	1	0.219148683243306	0.492845193401859
Y	56825732	56833874	23	gain	AAAAAAAAAAAAAAABBBBBBBB	6.37112	germline	1	0.00270026486961136	0.00495817854330716
Y	56833874	56839302	21	gain	AAAAAAAAAAAAAABBBBBBB	9.07062	germline	1	0.0143076639123877	0.036634215846126
Y	56839302	56844730	6	gain	AAAAAB	14.0742	germline	1	0.0143129167097894	0.0366424411264401
