chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	6377654	6386206	1	loss	A	-1	somatic	0	0.000537756165889495	0.000678107776925452
1	16612260	16622950	6	gain	-	-1	germline	1	0.000532412994385639	0.000671273068303613
1	16629364	16635778	4	gain	-	-1	germline	1	0.014313179194613	0.0366420453833015
1	16676400	16943650	3	gain	-	-1	germline	1	1.03864263377395e-09	5.24145171709733e-11
1	31430738	31432876	5	gain	-	-1	germline	1	0.0832839696396221	0.270070756831339
1	106352672	106369776	3	gain	-	-1	germline	1	1.15830126835715e-06	5.62420512606465e-07
1	125073000	125085828	4	gain	-	-1	germline	1	0.000532562044488735	0.000671621049876392
1	125085828	125087966	1	loss	A	-1	somatic	0	0.0852302915665002	0.273434509894314
1	125149968	125158520	3	gain	-	-1	germline	1	0.000533184968257899	0.000672821967402149
1	150247950	150427542	2	neutral	AA	28.1711	somatic	0	1.5631066319674e-12	9.73729985531691e-11
1	151481576	151524336	2	neutral	AA	17.0656	somatic	0	0.00556203982057102	0.0344229718534868
1	152580508	152612578	1	loss	A	-1	germline	1	2.9344382655832e-09	9.56712487010236e-12
1	153384396	153581092	2	neutral	AA	36.7511	somatic	0	0.434696032553083	0.791058548168359
1	155577984	155580122	1	loss	A	-1	somatic	0	0.0862539312831377	0.275191176415225
1	160091302	160131924	2	neutral	AA	27.2839	somatic	0	0.811329959646646	0.961385054516935
1	163093054	163155056	2	neutral	AA	54.5678	somatic	0	0.81587783461379	0.59577145703382
1	169248356	169269736	1	loss	A	-1	somatic	0	0.000709306399018398	6.92490308006333e-05
1	175303172	175333104	2	neutral	AA	14.0983	somatic	0	0.129744988132569	0.25861944092458
1	182298708	182332916	2	neutral	AA	18.1917	somatic	0	0.00447083881093162	0.046399172876059
1	184706096	184740304	2	neutral	AA	100	somatic	0	0.344039878192691	0.339796977259865
1	194087640	194151780	2	neutral	AA	31.9786	germline	1	0.0642830337443925	0.0479812744988032
1	198724962	198893864	2	neutral	AA	66.9581	somatic	0	0.21973814482303	0.245995014958915
1	203398630	203501254	2	neutral	AA	11.18	somatic	0	0.364256775360401	0.55334186109178
1	205094064	205282208	2	neutral	AA	44.2562	somatic	0	0.000488165111908721	0.000946693815452648
1	207708838	207730218	2	neutral	AA	38.5565	somatic	0	0.348191339767079	0.206910913535681
1	212741690	212782312	2	neutral	AA	27.2922	somatic	0	0.434004947874785	0.635246611420946
1	222546558	222657734	2	neutral	AA	31.0969	somatic	0	0.394929306255175	0.822155332081316
1	224252682	224485724	2	neutral	AA	9.99374	somatic	0	2.26780295298785e-10	1.36971323172475e-10
1	227823142	227855212	3	gain	AAB	2.85527	germline	1	7.76791600585303e-10	4.90713025769196e-11
1	227855212	228024114	3	gain	AAB	1.68897	germline	1	1.25063566882806e-43	0
1	230841998	230908276	2	neutral	AA	100	somatic	0	0.349202578153744	0.654480973721176
1	231318772	231406430	2	neutral	AA	93.0078	somatic	0	0.0475985665844764	0.166749680913065
1	232684954	232764060	2	neutral	AA	15.591	somatic	0	0.466814249694614	0.629307245293651
1	234889232	234931992	2	neutral	AA	27.2839	somatic	0	0.0977272057614303	0.128062778649585
1	248523258	248632296	1	loss	A	-1	somatic	0	5.1719990804788e-16	0
2	3179206	3181344	8	gain	AAAAAAAA	12.8342	germline	1	0.0832797632003769	0.270063451552175
2	3181344	3542666	2	neutral	AA	22.1734	somatic	0	0.902917904326696	0.439977873260592
2	4164824	4175514	1	loss	A	-1	somatic	0	0.000108968602784741	9.20722113504358e-05
2	4290966	4419246	2	neutral	AA	33.5686	somatic	0	0.134329072360884	0.300783909820496
2	11761138	11818864	2	neutral	AA	13.7067	somatic	0	0.727048702398283	0.241484357977442
2	32914510	32916648	5	gain	AAABB	74.5483	somatic	0	0.0832871245820013	0.270076235885371
2	42169912	42507716	2	neutral	AA	67.0987	somatic	0	1.84369133235123e-06	4.05476352605127e-07
2	45308496	45558642	2	neutral	AA	100	somatic	0	0.726898065418861	0.349742232248956
2	47352424	47467876	2	neutral	AA	9.94507	somatic	0	2.07514716163916e-10	4.38015202997022e-08
2	52519970	52558454	1	loss	A	-1	germline	1	9.93572255567416e-13	4.66293670342566e-15
2	61465362	61559434	2	neutral	AA	44.5628	somatic	0	4.55141158317748e-07	4.21860671806495e-06
2	67011334	67430382	2	neutral	AA	25.1275	somatic	0	0.0803873171766328	0.0806697158553573
2	85293372	85404548	2	neutral	AA	12.0754	somatic	0	0.123666958676948	0.268189060181993
2	89772482	89789586	5	gain	-	-1	germline	1	4.60001156241311e-06	1.66494394204797e-06
2	89789586	89793862	3	gain	-	-1	germline	1	0.0177723536548411	0.0472137342912132
2	89793862	89796000	3	gain	AAA	80.1282	germline	1	0.0835166429786971	0.270474597661748
2	89796000	89825932	4	gain	AAAA	8.99654	germline	1	1.97930118324589e-09	7.57688356500807e-11
2	89825932	89843036	32	gain	AAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	7.90799	germline	1	9.63830521064791e-07	2.25174743517798e-07
2	89843036	89849450	4	gain	AAAB	24.2452	germline	1	0.00270216192467574	0.00496016728728299
2	89849450	89851588	4	gain	AABB	37.5414	germline	1	0.0832913313224376	0.270083541416961
2	91410190	91414466	4	gain	-	-1	germline	1	0.0143151709123213	0.0366485424122167
2	117040534	117044810	0	loss	-	-1	germline	1	0.0143150879192026	0.0366570400477525
2	130914016	131405756	2	neutral	AA	19.0284	somatic	0	0.0601755990811777	0.276095581160822
2	135055322	135970386	2	neutral	AA	7.11148	somatic	0	2.60648781193231e-19	8.88178419700125e-16
2	135970386	135983214	2	neutral	AA	54.5678	somatic	0	0.726191493788074	0.796589277778671
2	137471262	137492642	2	neutral	AA	54.5678	somatic	0	0.931676641501236	0.470117644025465
2	140808680	140934822	2	neutral	AA	100	somatic	0	0.52800115979507	0.436077789639789
2	146104506	146121610	1	loss	A	-1	germline	1	1.03430702953056e-06	2.95454955945296e-07
2	149157570	149349990	2	neutral	AA	26.4575	somatic	0	2.61969699484559e-05	1.60342360120413e-05
2	153172734	153572540	2	neutral	AA	31.6598	somatic	0	0.233154935625344	0.284505607406804
2	190880640	191107268	2	neutral	AA	100	somatic	0	0.614995826843883	0.892470048273078
2	218899130	219016720	2	neutral	AA	23.191	somatic	0	0.229808523130049	0.186997754449698
2	241046672	241127916	2	neutral	AA	9.11427	somatic	0	0.723955039929763	0.914506150920352
3	32484772	32510428	2	neutral	AA	27.2839	somatic	0	0.881910990663423	0.956380993425384
3	34701878	34706154	1	loss	A	-1	somatic	0	0.0243163193400783	0.0680019994844918
3	34864366	35086718	2	neutral	AA	27.6514	somatic	0	0.584662045478949	0.37736573865057
3	38084194	38088470	3	gain	AAB	48.1745	somatic	0	0.0174614279382643	0.0462609484812143
3	45359808	47044552	2	neutral	AA	4.27603	somatic	0	3.60017627466631e-07	5.02126808180625e-05
3	64526978	64576152	2	neutral	AA	27.2841	somatic	0	0.356140719422543	0.35165895835979
3	72721932	72907938	2	neutral	AA	91.5191	somatic	0	0.0518660372478939	0.133400688746525
3	74806482	75056628	2	neutral	AA	32.8612	germline	1	0.229956727611217	0.312101256046652
3	80012512	80016788	1	loss	A	-1	somatic	0	0.0146603454789848	0.0376962690482995
3	84628454	84718250	2	neutral	AA	12.1821	germline	1	0.0666137416427156	0.088170031675369
3	90390364	90416020	2	neutral	AA	1.29938	germline	1	0.0084105508052717	0.0626372746793702
3	91517090	91523504	3	gain	-	-1	somatic	0	0.00270532444187386	0.0049661067121507
3	98687942	98694356	1	loss	A	-1	somatic	0	0.00313697893560533	0.00649030972451015
3	99179682	99183958	0	loss	-	-1	germline	1	0.0143084498447269	0.0366352995353056
3	99224580	99230994	1	loss	A	-1	somatic	0	0.00273716674293599	0.00501349864920397
3	121419158	121427710	2	neutral	AA	54.5678	somatic	0	0.203496747596162	0.075979990622182
3	133413338	133417614	1	loss	A	-1	somatic	0	0.0143438288832969	0.0367133178640088
3	136297500	136308190	1	loss	A	-1	somatic	0	0.00223807587996637	0.0124697689042418
3	149245228	149251642	1	loss	A	-1	germline	1	0.00271993996994624	0.00500960607882617
3	162793734	162909186	1	loss	A	-1	germline	1	9.65644688098734e-36	0
3	185452258	185456534	1	loss	A	-1	somatic	0	0.0145464446725282	0.0373477956554107
3	191545558	191549834	1	loss	A	-1	somatic	0	0.0145288615377537	0.0372830567776151
3	193157610	193168300	1	loss	A	-1	germline	1	0.000110769092977364	9.54829550632308e-05
4	126142	134694	1	loss	A	-1	somatic	0	0.000564767811721231	0.00073572971782776
4	6895050	6899326	0	loss	-	-1	somatic	0	0.0143101091087342	0.0366395467943749
4	40292748	40297024	3	gain	-	-1	germline	1	0.0143350184447188	0.036706310286866
4	45024142	45028418	1	loss	A	-1	germline	1	0.0145811611186371	0.0374607520413504
4	46200042	46204318	1	loss	A	-1	germline	1	0.0145916240489075	0.0374834300995707
4	58876244	58878382	0	loss	-	-1	somatic	0	0.0832660934613905	0.270039710391072
4	68518624	68623386	1	loss	A	-1	germline	1	6.02915659796833e-24	0
4	69294718	69365272	1	loss	A	-1	germline	1	4.42512366043447e-08	4.24175206070743e-09
4	74560612	74564888	1	loss	A	-1	somatic	0	0.0152138960489624	0.0393766313503339
4	114254720	114261134	1	loss	A	-1	germline	1	0.00271761306659472	0.00498788942489681
4	137171942	137180494	1	loss	A	-1	germline	1	0.000539263844107053	0.000687428321465178
4	160957192	160963606	1	loss	A	-1	germline	1	0.00273112072140241	0.00501324247388435
4	172066240	172072654	1	loss	A	-1	germline	1	0.0143553894323665	0.0367563900921314
4	172502392	172513082	1	loss	A	-1	germline	1	0.000110638492260516	9.5603185423454e-05
4	173481596	173485872	1	loss	A	-1	somatic	0	0.0143379270237881	0.0367133178640088
4	189035546	189037684	4	gain	-	-1	germline	1	0.083291857177094	0.270084454618552
4	189270726	189279278	1	loss	A	-1	germline	1	0.000543000432314315	0.000687053954131267
5	756852	778232	4	gain	AAAB	2.45005	germline	1	0.000107659878527472	9.08873627659679e-05
5	816716	820992	3	gain	AAB	6.48575	germline	1	0.0143213135810466	0.0366600396247898
5	12810896	12821586	1	loss	A	-1	germline	1	0.000110825451911473	9.754156380537e-05
5	17600016	17610706	1	loss	A	-1	germline	1	0.000109072528767886	9.24336664187564e-05
5	18643360	18647636	1	loss	A	-1	somatic	0	0.0143444940158594	0.036702056257406
5	20832672	20834810	4	gain	AABB	1.95558	somatic	0	0.083291857177094	0.270084454618552
5	26795554	26801968	0	loss	-	-1	germline	1	0.0143125983229961	0.0366495420445839
5	29630542	29681854	2	neutral	AA	27.2839	germline	1	0.589456507418081	0.956314693859029
5	31554742	31599640	2	neutral	AA	33.376	somatic	0	0.00627660642936688	0.0179579041202054
5	45370498	45374774	1	loss	A	-1	somatic	0	0.0143387581419863	0.036726084672665
5	46270596	46277010	1	loss	A	-1	somatic	0	0.00281334520042722	0.00528769376891203
5	46405290	46411704	1	loss	A	-1	somatic	0	0.0028270660675101	0.0053737046527309
5	52909086	52913362	1	loss	A	-1	somatic	0	0.0144619819348322	0.0370889234591378
5	58036010	58038148	0	loss	-	-1	germline	1	0.0832676706461969	0.27004244967806
5	65523286	65525424	2	neutral	AA	100	somatic	0	0.260785132701625	0.504683997806247
5	76134180	76157698	3	gain	AAB	1.49206	germline	1	9.29896957754797e-09	5.68079694396317e-10
5	86918252	86922528	0	loss	-	-1	germline	1	0.0143080350552439	0.0366352995353056
5	91202804	91207080	1	loss	A	-1	somatic	0	0.0143238045144435	0.0366757909277236
5	118537134	118545686	1	loss	A	-1	somatic	0	0.00282970714036088	0.00533973396245568
5	130465036	131112850	2	neutral	AA	10.0192	somatic	0	0.4882155812744	0.615604056554862
5	133047740	133101190	2	neutral	AA	36.3786	somatic	0	0.0722171253737749	0.203821746801233
5	134916352	135018976	2	neutral	AA	29.8315	somatic	0	0.814548896989156	0.637676630672447
5	138471846	138482536	1	loss	A	-1	germline	1	0.000110602273325506	9.62277601216366e-05
5	145738908	145743184	1	loss	A	-1	somatic	0	0.0143756193439443	0.036815059335333
5	157066032	157117344	2	neutral	AA	32.8379	somatic	0	2.97521549290266e-05	0.000179592985222743
5	164326680	164333094	1	loss	A	-1	somatic	0	0.00369952377449924	0.00862222339267138
5	178585002	178587140	9	gain	AAAAAABBB	24.3362	germline	1	0.0832787116174569	0.270061625254921
5	178681212	178687626	1	loss	A	-1	somatic	0	0.0027457407235947	0.00503454589905394
5	180748658	180767900	3	gain	AAB	7.23525	germline	1	0.000107862544089655	9.10967658147577e-05
5	180949630	181003080	1	loss	A	-1	germline	1	4.96176655926013e-18	0
5	181154878	181283158	2	neutral	AA	12.5949	germline	1	0.172888123724818	0.384156934136059
6	256560	369874	4	gain	-	-1	germline	1	3.89482212975432e-35	0
6	372012	374150	6	gain	-	-1	germline	1	0.0832834438253044	0.270069843663555
6	374150	382702	4	gain	-	-1	germline	1	0.000532658509391077	0.000671566094176845
6	19041028	19049580	1	loss	A	-1	somatic	0	0.000537623454282064	0.000677599615631741
6	32486910	32529670	1	loss	A	-1	germline	1	2.09863762003359e-13	4.44089209850063e-16
6	35785844	35798672	3	gain	-	-1	somatic	0	3.04861659136054e-05	2.62250904246031e-05
6	48962338	48970890	1	loss	A	-1	somatic	0	0.000543482788480638	0.000693869109796741
6	51200824	51205100	1	loss	A	-1	somatic	0	0.0154796301964761	0.0401790036694496
6	54063606	54070020	1	loss	A	-1	somatic	0	0.00272557464773608	0.00499513572468069
6	60236012	60240288	4	gain	-	-1	germline	1	0.0143136771011218	0.0366430448606144
6	73882866	73891418	1	loss	A	-1	germline	1	0.000536333321021214	0.000675653433926504
6	78257214	78325630	1	loss	A	-1	germline	1	1.24531268488641e-22	0
6	101760248	102038188	2	neutral	AA	11.6938	somatic	0	0.881155502156281	0.755800067279657
6	120253948	120262500	2	neutral	AA	54.5678	somatic	0	0.530518577631203	0.814847160164617
6	130178544	130261926	2	neutral	AA	78.3467	somatic	0	0.0483846405387207	0.144474083091676
6	131784182	131797010	1	loss	A	-1	somatic	0	3.75012529860564e-05	3.57876274383884e-05
6	131844046	131893220	2	neutral	AA	25.0582	somatic	0	0.249570429662522	0.56601476194356
6	134717518	134788072	2	neutral	AA	27.2839	somatic	0	0.23655412183552	0.256380750897821
6	135142980	135172912	2	neutral	AA	21.8271	somatic	0	0.366159472352896	0.549991351183793
6	137576024	137633750	2	neutral	AA	41.2053	somatic	0	0.856103998609342	0.853005451283073
6	139923548	140926270	2	neutral	AA	9.32306	somatic	0	0.725219061205888	0.76107388406708
6	150215880	150235122	2	neutral	AA	27.2839	somatic	0	0.121356437598738	0.255708760608429
6	151547854	151571372	2	neutral	AA	54.5679	somatic	0	0.0198638598471682	0.0272499451377837
6	151571372	151579924	2	neutral	AA	100	somatic	0	0.30849612689057	0.483683956852676
6	152227738	152253394	2	neutral	AA	18.1893	somatic	0	0.484440238574231	0.404395497857478
6	157311902	157314040	8	gain	AAAAABBB	2.06307	germline	1	0.0832797632003769	0.270063451552175
6	157314040	157316178	4	gain	AABB	90.9919	germline	1	0.083291857177094	0.270084454618552
6	157553496	157574876	2	neutral	AA	27.2839	somatic	0	0.267623153715734	0.546814982043955
6	162002674	162045434	2	neutral	AA	50.6323	somatic	0	0.945474003752224	0.54185530152193
6	164121432	164125708	1	loss	A	-1	somatic	0	0.0144531075176949	0.0370384475371585
6	164335232	164549032	2	neutral	AA	77.2552	somatic	0	0.00358355159206965	0.00723196688323824
6	164775660	164782074	1	loss	A	-1	somatic	0	0.00271662506348539	0.0049863597498454
6	165957974	165979354	2	neutral	AA	100	somatic	0	0.446409985987203	0.547375676963573
6	168329016	168393156	2	neutral	AA	12.1037	somatic	0	0.412017736881918	0.418846431720596
7	9762108	9766384	0	loss	-	-1	germline	1	0.0143150049265083	0.0366560402364583
7	20276792	20281068	1	loss	A	-1	somatic	0	0.0143358494141977	0.0366917983138173
7	23994774	24001188	1	loss	A	-1	somatic	0	0.0179562244656075	0.0477973078909515
7	48541152	48553980	1	loss	A	-1	germline	1	2.28849151353357e-05	1.32609824384788e-05
7	54394996	54399272	1	loss	A	-1	somatic	0	0.0145418998649873	0.0373406822723817
7	57486544	57497234	3	gain	-	-1	germline	1	0.000108846491214841	9.37780163124957e-05
7	57905592	57916282	1	loss	A	-1	somatic	0	0.000113527435669688	9.78020414297287e-05
7	62297044	62348356	3	gain	AAB	0.728326	somatic	0	1.64354869352116e-10	6.80013823028958e-11
7	62401806	62406082	5	gain	-	-1	germline	1	0.0143130962116803	0.0366420453833015
7	62438152	62453118	3	gain	AAB	2.59285	germline	1	9.17501255193134e-06	2.85019378735152e-05
7	62453118	62455256	4	gain	AAAA	7.85124	germline	1	0.0832939606226125	0.270088107447453
7	62793060	62827268	1	loss	A	-1	germline	1	2.05937756369282e-11	1.96509475358653e-13
7	73587822	73592098	1	loss	A	-1	somatic	0	0.0149773015189615	0.0386549919046018
7	75054490	75069456	2	neutral	AA	54.5678	somatic	0	0.00967246720831505	0.0350749062799016
7	81968782	82005128	2	neutral	AA	18.1893	somatic	0	0.173287228779386	0.260172151373961
7	98422830	98531868	2	neutral	AA	7.96156	somatic	0	4.55519663289454e-06	0.000126029157799024
7	100947808	100952084	3	gain	AAB	0.666013	germline	1	0.016424124709636	0.0430553031178807
7	100952084	100958498	4	gain	AABB	20.7955	germline	1	0.00270229803999385	0.00496250166857259
7	100958498	100960636	8	gain	AAAAABBB	54.356	germline	1	0.0832787116174569	0.270061625254921
7	100960636	100973464	3	gain	AAB	0.966437	germline	1	2.2170402974463e-05	1.23372896000395e-05
7	101321958	101490860	3	gain	AAB	0.273223	germline	1	6.61251370069684e-47	0
7	112435282	112514388	2	neutral	AA	15.5908	somatic	0	0.246350777169953	0.0928457541396815
7	112794466	112798742	1	loss	A	-1	somatic	0	0.0145089034527016	0.0372386849316522
7	116290096	116300786	1	loss	A	-1	germline	1	0.000113798596323099	0.000104280025641557
7	132560276	132564552	1	loss	A	-1	somatic	0	0.0144331158376404	0.0369736741886946
7	143846778	143851054	4	gain	AAAB	22.9265	germline	1	0.0143143410002336	0.0366437944842525
7	148377200	148379338	0	loss	-	-1	germline	1	0.0832655677384995	0.270038797299916
7	152127252	152400916	2	neutral	AA	16.8457	somatic	0	0.0208585328813241	0.0135563542145518
7	152400916	152407330	8	gain	AAAAAABB	1.74115	germline	1	0.00270107322764568	0.00495920338009515
7	152407330	152465056	2	neutral	AA	3.96496	somatic	0	0.0272230997112878	0.0474322637418826
7	158149998	158152136	5	gain	AAABB	5.4534	germline	1	0.0832839696396221	0.270070756831339
7	158594702	158596840	4	gain	AAAA	25.3502	germline	1	0.0832887020894954	0.270078975442814
8	643538	649952	1	loss	A	-1	somatic	0	0.0027674492826502	0.0051116140616333
8	662780	690574	2	neutral	AA	6.84898	somatic	0	0.101119835869007	0.193121829814634
8	5047818	5056370	1	loss	A	-1	germline	1	0.000536621730217898	0.000679643667194085
8	5962882	6014194	2	neutral	AA	36.3786	germline	1	0.909921138138928	0.677657178203373
8	6552970	6578626	2	neutral	AA	8.46375	somatic	0	0.422287832384692	0.21962770208039
8	24287680	24294094	1	loss	A	-1	somatic	0	0.0027453340751185	0.00507942375277093
8	25115086	25134328	1	loss	A	-1	germline	1	2.08920511135102e-07	3.30501516154769e-08
8	25211296	25213434	0	loss	-	-1	germline	1	0.0832692478552033	0.270045188985333
8	25493512	25499926	1	loss	A	-1	somatic	0	0.00275609422146325	0.00511281374115691
8	25722278	25728692	3	gain	-	-1	germline	1	0.0027044464666461	0.00496402463365897
8	26350850	26410714	2	neutral	AA	27.2839	somatic	0	0.761649841018137	0.63796436331511
8	33250176	33333558	2	neutral	AA	21.8271	somatic	0	0.775028191005965	0.79122833727344
8	39375546	39529482	1	loss	A	-1	germline	1	3.21464971646229e-46	0
8	42332400	42334538	0	loss	-	-1	germline	1	0.0832708250884101	0.27004792831289
8	42700136	42898970	2	neutral	AA	32.0646	somatic	0	3.30407941984123e-09	8.14116618563787e-09
8	43236774	43241050	10	gain	AAAAAAABBB	9.38719	germline	1	0.014309279455515	0.0366372981917902
8	43241050	43243188	6	gain	AAAABB	5.10947	germline	1	0.0832818663984864	0.270067104173726
8	43655822	43660098	4	gain	AAAA	36.4365	germline	1	0.0143143410002336	0.0366455436582538
8	46492948	46497224	1	loss	A	-1	germline	1	0.014386118823617	0.0367990049134232
8	56235814	56246504	2	neutral	AA	36.3786	somatic	0	0.0706741257026453	0.11032858020414
8	59810550	60114146	2	neutral	AA	100	somatic	0	0.000252440429657978	0.000246046628418095
8	69767216	69795010	2	neutral	AA	27.2841	somatic	0	0.759883400865158	0.737562964098245
8	69795010	69797148	2	neutral	AA	100	somatic	0	0.467277039375861	0.694818098066685
8	73966248	73998318	2	neutral	AA	13.643	somatic	0	0.00492711819004493	0.00208343039276804
8	74449436	74455850	1	loss	A	-1	somatic	0	0.00282721579947062	0.00519854738672432
8	82398520	82466936	2	neutral	AA	25.0562	somatic	0	0.360190652233085	0.258098370722701
8	86078018	86204160	2	neutral	AA	10.7355	somatic	0	3.49586634884933e-07	1.61889376608659e-05
8	102715934	102762970	2	neutral	AA	15.8882	somatic	0	0.179623726822605	0.177289066744339
8	132023638	132087778	2	neutral	AA	12.494	somatic	0	0.0138389142454772	0.0546006987146135
8	134345506	134591376	2	neutral	AA	100	somatic	0	0.000382384353016639	0.00202908750571273
8	136147840	136152116	1	loss	A	-1	somatic	0	0.0144168227041236	0.0368351359786976
8	138565918	138713440	2	neutral	AA	6.34927	somatic	0	2.33443876548397e-05	0.000138635816149035
8	140064656	140122382	2	neutral	AA	44.2258	somatic	0	0.738454012552613	0.744869278057795
8	144081958	144124718	2	neutral	AA	54.5678	somatic	0	0.230260854597123	0.489507998905235
8	144124718	144126856	6	gain	AAAABB	6.75841	germline	1	0.0832818663984864	0.270067104173726
8	144126856	144163202	2	neutral	AA	36.3786	somatic	0	0.0630965833972388	0.134876685761339
8	144505282	144770394	2	neutral	AA	30.6693	germline	1	0.354043795603048	0.717723584181551
9	22496036	22498174	0	loss	-	-1	germline	1	0.0832729281036644	0.270051580781185
9	39035604	39037742	6	gain	-	-1	somatic	0	0.0832818663984864	0.270067104173726
9	40912768	40929872	7	gain	-	-1	somatic	0	0.000532375007439548	0.00067122729384006
9	64772848	64774986	1	loss	A	-1	somatic	0	0.0832944864907155	0.270089020660323
9	73237190	73279950	2	neutral	AA	21.8386	somatic	0	0.511587896793672	0.60630326880053
9	76739234	76775580	2	neutral	AA	100	somatic	0	0.16627974358696	0.16697074222363
9	80523494	80551288	2	neutral	AA	36.3786	somatic	0	0.30660898301337	0.474389806183858
9	86095122	86133606	2	neutral	AA	27.2855	germline	1	0.407496439830037	0.699327303306262
9	88568788	88639342	2	neutral	AA	27.2839	somatic	0	0.423599631622407	0.548722627749202
9	89402608	89483852	2	neutral	AA	11.1352	somatic	0	0.0213157402916947	0.0278430103960117
9	98399312	98775600	2	neutral	AA	65.1668	somatic	0	5.67516935309428e-10	1.88137314616199e-07
9	98786290	98908156	2	neutral	AA	30.4554	somatic	0	0.924420518238692	0.553694148831753
9	110688536	110690674	0	loss	-	-1	somatic	0	0.0832697735969166	0.270046102092265
9	112165894	112321968	2	neutral	AA	65.3713	somatic	0	0.000432729872107108	0.000422114989222178
9	112482318	112510112	2	neutral	AA	100	somatic	0	0.0531668688260563	0.0521801836438046
9	115819736	115828288	3	gain	AAB	7.38686	germline	1	0.00053329909823282	0.000672134173084982
9	117181642	117217988	2	neutral	AA	100	germline	1	0.000913575670827504	0.00187443477417737
9	122736166	122746856	2	neutral	AA	36.3786	somatic	0	0.0205073894901497	0.0512720001979553
9	125261144	125378734	2	neutral	AA	13.3986	somatic	0	2.07326869003837e-07	8.88704709636201e-05
9	125378734	125387286	2	neutral	AA	54.5678	germline	1	0.707773504528247	0.731798909461573
9	129423830	129470866	2	neutral	AA	0.177253	somatic	0	0.465346231137074	0.12969025257227
9	131514794	131538312	2	neutral	AA	11.7482	somatic	0	0.787350124874316	0.811668695081129
9	131741422	131745698	3	gain	AAB	20.0727	somatic	0	0.0143656677493994	0.0367954938251414
9	137325878	137328016	4	gain	AAAA	14.0165	germline	1	0.0832902796211929	0.27008171502054
10	6022746	6123232	2	neutral	AA	9.33151	somatic	0	0.373162191236801	0.213524426037138
10	26568926	26658722	2	neutral	AA	0.342543	somatic	0	0.370658723112537	0.278974213068628
10	27445506	27498956	2	neutral	AA	15.6414	somatic	0	0.465059987439218	0.309577143685797
10	38484000	38526760	3	gain	AAB	0.575845	germline	1	2.38651330135862e-14	5.32907051820075e-15
10	38526760	38528898	24	gain	AAAAAAAAAAAAAAAAAAAAAAAB	9.61084	germline	1	0.0832692478552033	0.270045188985323
10	38573796	38578072	3	gain	AAA	84.6492	germline	1	0.0143494833773007	0.0367043083369154
10	38578072	38582348	5	gain	AAAAA	0.966174	germline	1	0.014313179194613	0.0366437944842525
10	38813252	38836770	3	gain	AAB	0.827635	germline	1	9.25405090382248e-09	5.60504753721602e-10
10	39557276	39561552	1	loss	A	-1	somatic	0	0.0143599660191286	0.0367912307547947
10	41827832	41842798	2	neutral	AA	3.85434	germline	1	0.047661698951387	0.0239791320877353
10	41857764	41879144	22	gain	AAAAAAAAAAAAAAABBBBBBB	5.05585	germline	1	0.00010754381462121	9.08238568662068e-05
10	41881282	41911214	44	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2.0583	germline	1	0.000532100407742341	0.000671016768995725
10	42300330	42321710	3	gain	AAA	0.869028	germline	1	7.2206710290558e-07	3.41702308448433e-07
10	46514328	46561364	6	gain	AAAABB	0.455625	germline	1	9.52399483716595e-15	0
10	49794020	49802572	1	loss	A	-1	somatic	0	0.000559638539863509	0.000750939734289968
10	67725426	67727564	0	loss	-	-1	somatic	0	0.0832724023458173	0.27005066766073
10	76591712	76771304	2	neutral	AA	57.3704	somatic	0	0.587382034044278	0.827912512588715
10	95128172	95211554	2	neutral	AA	94.9113	somatic	0	0.68867376355671	0.602153798066771
10	98501936	98581042	2	neutral	AA	27.2839	somatic	0	0.358154976242338	0.211547722997212
10	100770354	100832356	2	neutral	AA	27.2839	germline	1	0.00375438761744044	0.0154152608916021
10	112351900	112356176	1	loss	A	-1	somatic	0	0.0143933724110779	0.0368361400622254
10	113354622	113523524	2	neutral	AA	100	somatic	0	1.42433195893342e-06	2.13475793547913e-05
10	120465610	120469886	1	loss	A	-1	somatic	0	0.0143997949434737	0.0369017082832884
11	4947332	4953746	1	loss	A	-1	germline	1	0.00272091385501396	0.00498707354468542
11	18923438	18940542	3	gain	-	-1	germline	1	9.67375095481567e-07	2.25974603806911e-07
11	28984866	28991280	1	loss	A	-1	somatic	0	0.00273317545686469	0.00504149379245233
11	42946006	42950282	3	gain	-	-1	somatic	0	0.0143228080952277	0.036663039416576
11	45406844	45411120	1	loss	A	-1	somatic	0	0.0144567906548638	0.0370571166216525
11	47040276	47042414	0	loss	-	-1	somatic	0	0.0832692478552033	0.270045188985333
11	48712192	48716468	1	loss	A	-1	somatic	0	0.0143272924632463	0.0366780415971413
11	50174584	50178860	1	loss	A	-1	somatic	0	0.0143321103861168	0.0366978026592789
11	55117640	55121916	1	loss	A	-1	somatic	0	0.0143963748389538	0.0367784441361062
11	64221244	64381594	2	neutral	AA	36.1248	germline	1	0.0101787114503297	0.0475790378585208
11	68512210	68984708	2	neutral	AA	6.67715	somatic	0	0.279039929241278	0.271448734260402
11	75730098	75939622	2	neutral	AA	99.4833	somatic	0	0.286572681869708	0.320666950847325
11	91239150	91284048	2	neutral	AA	36.5707	somatic	0	0.211805048608026	0.441075079556726
11	96564908	96567046	0	loss	-	-1	germline	1	0.0832692478552033	0.270045188985333
11	104396402	104402816	1	loss	A	-1	germline	1	0.0143116025914607	0.0366420453833044
11	114601076	114603214	0	loss	-	-1	somatic	0	0.0832776600452932	0.270059798966694
11	123706818	123721784	3	gain	AAB	7.25265	germline	1	4.61511413524171e-06	1.66975889126508e-06
11	125524118	125893992	2	neutral	AA	25.5826	somatic	0	0.9983946361594	0.609957519960442
11	132053570	132059984	3	gain	AAB	5.95245	germline	1	0.0027067024796125	0.00497266286470854
12	756852	765404	1	loss	A	-1	germline	1	0.000534787795205412	0.000673253321416323
12	2255590	2257728	6	gain	AAAABB	53.5692	germline	1	0.0832829180136759	0.270068930498025
12	4331588	4359382	2	neutral	AA	27.2839	somatic	0	0.313334147780221	0.442037598197482
12	8498550	8573380	2	neutral	AA	21.8271	somatic	0	0.273293263461646	0.332706668296587
12	18029754	18096032	2	neutral	AA	100	somatic	0	0.194698450182801	0.273015460114101
12	18096032	18100308	1	loss	A	-1	somatic	0	0.0143541414956435	0.0367636566236419
12	18100308	18371834	2	neutral	AA	20.1859	somatic	0	0.0270798407973817	0.0194164222722433
12	30083798	30090212	1	loss	A	-1	somatic	0	0.00273140325927727	0.00500111351638099
12	33235210	33241624	1	loss	A	-1	germline	1	0.00272033557233759	0.00499876249175146
12	34659118	37752804	2	neutral	AA	0.569345	somatic	0	2.67809146755578e-13	7.71455721526593e-09
12	37994398	37998674	3	gain	AAA	36.1383	somatic	0	0.014322891127827	0.0366600396247898
12	39711212	39715488	1	loss	A	-1	germline	1	0.0146157815340026	0.0375612381070312
12	47632502	47634640	1	loss	A	-1	somatic	0	0.0832865987515484	0.270075322704075
12	53137852	53629592	2	neutral	AA	9.60692	somatic	0	1.33008786782521e-17	6.77236045021345e-14
12	59517644	59541162	2	neutral	AA	4.78681	somatic	0	2.05393150224621e-05	5.98061186699583e-05
12	59541162	59553990	1	loss	A	-1	germline	1	2.31157679518032e-05	1.37105605273469e-05
12	60246702	60417742	2	neutral	AA	100	somatic	0	0.0829875398557404	0.148073741102674
12	71208228	71210366	0	loss	-	-1	somatic	0	0.0832687221161789	0.270044275880655
12	71962942	71965080	1	loss	A	-1	somatic	0	0.0832829180136759	0.270068930498036
12	79762366	79768780	4	gain	AABB	100	germline	1	0.00270216192467574	0.00496016728728299
12	82637976	82642252	1	loss	A	-1	somatic	0	0.0171683754679853	0.0453579724986392
12	86033120	86039534	1	loss	A	-1	somatic	0	0.00277395595258094	0.00516912167366357
12	89169566	89270052	2	neutral	AA	21.8272	somatic	0	0.733951890485091	0.328843029456916
12	90091044	90095320	1	loss	A	-1	somatic	0	0.0143503150863456	0.0367060600379009
12	101708936	101713212	1	loss	A	-1	somatic	0	0.0143870357657846	0.0367824552057526
12	109923132	109965892	2	neutral	AA	27.2848	somatic	0	0.783021974238375	0.777145861344719
12	118981838	119078048	2	neutral	AA	25.4653	somatic	0	0.29546242365644	0.0853718108005618
12	120923142	120929556	1	loss	A	-1	somatic	0	0.00308479972633285	0.00609070838127268
13	21375724	21377862	4	gain	AAAB	19.3461	germline	1	0.0832976417558105	0.270094499984802
13	22019262	22021400	0	loss	-	-1	germline	1	0.0832681963798435	0.270043362778231
13	29305566	29350464	2	neutral	AA	18.2325	somatic	0	0.20450538110055	0.333950818297822
13	37498382	37511210	1	loss	A	-1	germline	1	2.23937312158494e-05	1.24801551346643e-05
13	37671560	37714320	2	neutral	AA	21.8271	somatic	0	0.890051091351283	0.462755017068032
13	41398094	41402370	1	loss	A	-1	germline	1	0.0143909541902648	0.0368481909322022
13	45423948	45426086	0	loss	-	-1	germline	1	0.0832702993413189	0.270047015201451
13	45922102	46174386	2	neutral	AA	54.5343	somatic	0	0.0947535411885786	0.0644452366087909
13	46313356	46366806	2	neutral	AA	36.587	somatic	0	0.0452516397695846	0.0605378098927519
13	48958062	48962338	1	loss	A	-1	germline	1	0.0145979556461148	0.0374745103305879
13	50495284	50501698	1	loss	A	-1	germline	1	0.00273914141319384	0.0050538156893879
13	61961378	61963516	1	loss	A	-1	somatic	0	0.0832876504151434	0.270077149068942
13	63034654	63043206	3	gain	AAB	0.977343	germline	1	0.000533155707827965	0.000672436721338099
13	63043206	63058172	3	gain	AAB	1.10898	somatic	0	9.03072994337543e-05	8.34326209139258e-05
13	63058172	63064586	3	gain	AAB	0.694704	germline	1	0.00270294845521504	0.00496199410872977
13	63064586	63066724	5	gain	AAABB	1.54107	germline	1	0.0832839696396221	0.270070756831339
13	63066724	63068862	4	gain	AABB	0.996393	germline	1	0.083291857177094	0.270084454618552
13	71905216	71907354	1	loss	A	-1	germline	1	0.083330251831445	0.270151124422313
13	75471400	75627474	2	neutral	AA	70.3716	somatic	0	0.312684565212807	0.396528904521306
13	76315910	76320186	1	loss	A	-1	somatic	0	0.0155165235726866	0.040280397643604
13	76948758	77335736	2	neutral	AA	99.2601	somatic	0	0.588157778259322	0.891652802207428
13	79371112	79375388	1	loss	A	-1	somatic	0	0.0144635731399949	0.036878333196154
13	82590940	82599492	1	loss	A	-1	germline	1	0.0144229202842742	0.0369741778786866
13	85815044	85990360	2	neutral	AA	27.2967	somatic	0	0.340785231434292	0.362424734572948
13	86497066	86499204	1	loss	A	-1	somatic	0	0.083305004417554	0.270107285390825
13	92201250	92265390	2	neutral	AA	47.7373	germline	1	0.899164223169523	0.973001729789616
13	98005920	98037990	2	neutral	AA	21.8271	somatic	0	0.123776035393352	0.170455813858342
13	98602422	98606698	1	loss	A	-1	somatic	0	0.0150167743444919	0.0387197096460972
13	101240714	101244990	1	loss	A	-1	germline	1	0.0143256314418185	0.0366655394071187
13	109020896	109025172	1	loss	A	-1	somatic	0	0.0143313626837343	0.0366727902231263
13	109215454	109219730	1	loss	A	-1	somatic	0	0.0143393399500095	0.0367138184500164
13	114154234	114156372	1	loss	A	-1	germline	1	0.0833349864115003	0.270159344818837
14	16092726	16094864	14	gain	-	-1	germline	1	0.0832713508381902	0.270048841426572
14	18489424	18491562	2	neutral	AA	100	somatic	0	0.430434545587018	0.66498520539491
14	18658326	18662602	5	gain	AAABB	4.34835	germline	1	0.0143130962116803	0.0366420453833015
14	18681844	18694672	3	gain	AAB	5.55335	germline	1	0.000108097782500695	9.12272922738433e-05
14	20236170	20238308	0	loss	-	-1	somatic	0	0.0832734538642004	0.270052493903893
14	25882628	25906146	2	neutral	AA	21.916	somatic	0	0.676034176945045	0.76754873203284
14	26564650	26598858	2	neutral	AA	36.3786	somatic	0	0.0218558475745698	0.0185461929753939
14	29108870	29175148	2	neutral	AA	21.9079	somatic	0	0.0856269501827466	0.235555565794936
14	29297014	29421018	2	neutral	AA	15.7084	somatic	0	0.905973768003127	0.66169274010202
14	34346970	34351246	1	loss	A	-1	germline	1	0.0143515627296394	0.0367624036837284
14	35135892	35146582	1	loss	A	-1	germline	1	0.00010908907106651	9.21569539044098e-05
14	37299548	37301686	1	loss	A	-1	somatic	0	0.0832902796211929	0.270081715020551
14	42518406	42524820	1	loss	A	-1	somatic	0	0.00291772291420591	0.00565776774131665
14	46103832	46236388	2	neutral	AA	100	somatic	0	0.350691645898723	0.414328821566357
14	46448050	46520742	2	neutral	AA	47.7452	somatic	0	0.943516763022632	0.945512383805894
14	46830752	46920548	2	neutral	AA	47.5603	somatic	0	0.698485877501325	0.410920039500649
14	55639312	55652140	2	neutral	AA	100	somatic	0	0.560526862552253	0.51675350918729
14	59748548	59750686	0	loss	-	-1	somatic	0	0.0832729281036644	0.270051580781185
14	60432708	60434846	1	loss	A	-1	somatic	0	0.0833071081320175	0.270110938445109
14	63528532	63564878	2	neutral	AA	21.8271	somatic	0	1.11512920838321e-06	2.54726634141278e-06
14	66004336	66119788	2	neutral	AA	12.1262	somatic	0	4.79121458446349e-05	0.000123427024148803
14	78922132	79187244	2	neutral	AA	100	somatic	0	0.0239192038646631	0.0294747143367092
14	79640500	79649052	1	loss	A	-1	germline	1	0.000537939062991171	0.000680737426855815
14	82032922	82037198	1	loss	A	-1	somatic	0	0.0143419167787116	0.0367023064824927
14	82674322	82676460	0	loss	-	-1	somatic	0	0.0832771342632449	0.270058885825956
14	95487356	96038960	2	neutral	AA	25.1339	somatic	0	9.84707044712692e-09	5.74985257073557e-07
14	99301548	99307962	2	neutral	AA	54.5679	germline	1	0.255610202815684	0.574845282904917
14	99684250	99722734	2	neutral	AA	36.3786	somatic	0	0.749023731354847	0.791021128381489
14	100261510	100297856	2	neutral	AA	36.3786	somatic	0	0.000573581891316644	0.00154664328167176
14	100297856	100306408	2	neutral	AA	100	somatic	0	0.226402908592258	0.455098300925566
14	101711074	101726040	2	neutral	AA	18.0643	somatic	0	0.000617912366149846	0.000266425455185737
14	102070258	102313990	2	neutral	AA	22.2516	somatic	0	9.15208048987464e-10	3.4666525239313e-07
14	103254710	103333816	2	neutral	AA	100	somatic	0	0.00139637899497776	0.0033968459576349
14	104853934	104862486	1	loss	A	-1	somatic	0	0.00206672033896156	0.0144823459030705
15	0	17024894	8	gain	-	-1	somatic	0	NA	NA
15	17024894	17027032	6	gain	-	-1	germline	1	0.0832839696396221	0.270070756831339
15	17027032	17080482	8	gain	-	-1	somatic	0	NA	NA
15	17080482	17082620	21	gain	-	-1	germline	1	0.0832697735969166	0.270046102092254
15	17082620	20362312	8	gain	-	-1	somatic	0	1.62800767949469e-09	1.628503785156e-07
15	20362312	20379416	7	gain	-	-1	somatic	0	NA	NA
15	20381554	22224510	7	gain	-	-1	somatic	0	2.01130426526417e-13	4.44089209850063e-16
15	22224510	22299340	6	gain	AAAAAB	3.69419	germline	1	9.23615227371767e-09	5.58951329665547e-10
15	35076028	35125202	2	neutral	AA	13.642	somatic	0	0.104534260904088	0.341653500799861
15	40418890	40427442	2	neutral	AA	100	somatic	0	0.43152588059712	0.889253492928938
15	41006840	41190708	2	neutral	AA	41.3289	somatic	0	1.13070900550965e-18	1.11022302462516e-16
15	51951262	51983332	2	neutral	AA	21.218	somatic	0	0.000788066939233253	0.00256659568505713
15	54119194	54149126	2	neutral	AA	36.3786	somatic	0	0.398298246213221	0.594204592140857
15	55592276	55782558	2	neutral	AA	24.4662	somatic	0	0.000116978434563208	0.00063330125491956
15	56552238	56607826	2	neutral	AA	36.3786	somatic	0	0.168403788800002	0.390207519397542
15	72319988	72386266	2	neutral	AA	14.5991	somatic	0	0.0308082582661636	0.0813657907823212
15	73656238	73718240	2	neutral	AA	9.50819	somatic	0	0.80882642557971	0.256606021395883
15	76591712	76602402	1	loss	A	-1	germline	1	0.000109150534615859	9.21443947785594e-05
15	79997546	80222036	2	neutral	AA	26.3069	somatic	0	0.279618438216709	0.545398897473621
16	290768	395530	2	neutral	AA	69.3372	somatic	0	0.274598080110924	0.508376001060336
16	1024102	1026240	5	gain	AAABB	5.21427	germline	1	0.0832871245820013	0.270076235885371
16	17809540	17963476	2	neutral	AA	20.7846	somatic	0	0.00477005715734042	0.0199356167340899
16	20518386	20522662	2	neutral	AA	54.6942	somatic	0	0.137693178817067	0.267443251721792
16	20565422	20569698	1	loss	A	-1	somatic	0	0.0144102265145959	0.0369371726509267
16	21322274	21341516	2	neutral	AA	100	somatic	0	0.149110397276667	0.189744197641305
16	21523246	21583110	4	gain	AABB	4.01403	germline	1	4.2544967514215e-10	1.02529096324133e-11
16	22613626	22699146	4	gain	AAAB	6.23524	somatic	0	2.90805471521978e-27	0
16	23847252	23883598	2	neutral	AA	59.4029	somatic	0	0.00414131621585246	0.0879363350274013
16	34062616	34064754	30	gain	AAAAAAAAAAAAAAAAAAABBBBBBBBBBB	37.7007	germline	1	0.0832692478552033	0.270045188985323
16	34083996	34086134	16	gain	AAAAAAAAAAAAAAAA	19.3227	germline	1	0.0832702993413189	0.27004701520144
16	34086134	34096824	2	neutral	AA	11.3998	germline	1	0.000719905767711266	0.00221163338887864
16	34096824	34098962	13	gain	AAAAAAAABBBBB	12.1838	germline	1	0.0832718765906593	0.270049754542519
16	34098962	34101100	4	gain	AAAA	4.86492	germline	1	0.083291857177094	0.270084454618552
16	34203724	34205862	4	gain	AAAA	9.72092	somatic	0	0.083291857177094	0.270084454618552
16	34205862	34954162	2	neutral	AA	14.0477	somatic	0	1.58550134355692e-24	0
16	36123648	36125786	6	gain	-	-1	germline	1	0.0832834438253044	0.270069843663555
16	47739402	47765058	2	neutral	AA	47.4274	somatic	0	0.994685280676855	0.964874551652634
16	56090430	56267884	2	neutral	AA	52.7232	germline	1	0.137160150734823	0.54313114779065
16	57837176	57873522	2	neutral	AA	11.0665	somatic	0	0.00446501620542281	0.00665066685859095
16	57956904	58324640	2	neutral	AA	29.9614	somatic	0	0.000546507817553411	0.000933677535251309
16	65127756	65129894	0	loss	-	-1	germline	1	0.0832729281036644	0.270051580781185
16	65320176	65324452	1	loss	A	-1	somatic	0	0.0143817848856361	0.0368486931266164
16	68283444	68345446	2	neutral	AA	27.2839	somatic	0	0.954611532302602	0.922068445357688
16	70149918	70162746	4	gain	AABB	11.6083	germline	1	2.21288696556509e-05	1.23040211197356e-05
16	74109494	74111632	0	loss	-	-1	germline	1	0.0832676706461969	0.27004244967806
16	74171496	74327570	2	neutral	AA	100	somatic	0	0.550182459257813	0.597105110472679
16	74372468	74374606	4	gain	AABB	14.0077	germline	1	0.0832939606226125	0.270088107447453
16	75505608	75541954	3	gain	AAB	9.01729	germline	1	4.49072317602073e-12	3.86357612569554e-14
16	76504054	76510468	1	loss	A	-1	germline	1	0.0143267110864233	0.0366915481514098
16	78364114	78464600	2	neutral	AA	46.8067	somatic	0	0.77870402841138	0.724369826405266
17	9629552	9702244	2	neutral	AA	21.8585	somatic	0	0.213635075400491	0.346726671003242
17	10260262	10320126	2	neutral	AA	18.1893	somatic	0	0.21897579719462	0.58451530156143
17	15885340	15891754	1	loss	A	-1	somatic	0	0.0028151580455057	0.00525716390680053
17	21290204	21303032	4	gain	AABB	0.216266	germline	1	2.21295830694499e-05	1.23057831965534e-05
17	21850360	21858912	4	gain	-	-1	germline	1	0.000532556198654238	0.000671410409253892
17	21858912	21884568	3	gain	-	-1	somatic	0	3.17247889717232e-09	2.59257282309022e-10
17	21884568	21967950	1	loss	A	-1	germline	1	3.06906170853241e-19	0
17	21967950	21980778	18	gain	-	-1	germline	1	0.00270031742387269	0.00495823964461539
17	21980778	22158232	6	gain	AAAABB	0.379784	germline	1	2.01201637779916e-13	4.44089209850063e-16
17	22158232	22160370	4	gain	AAAB	13.4422	germline	1	0.0832960641111608	0.270091760312415
17	26774174	26806244	3	gain	-	-1	germline	1	2.91017893929289e-09	8.59812443465557e-10
17	26808382	26814796	4	gain	-	-1	germline	1	0.0143133451617517	0.0366425451189764
17	26814796	26823348	3	gain	-	-1	germline	1	0.000533713376346842	0.000673418589472341
17	26823348	26825486	5	gain	-	-1	germline	1	0.0832839696396221	0.270070756831339
17	26825486	26842590	3	gain	-	-1	germline	1	9.84494951831281e-07	2.39172478933014e-07
17	26842590	26846866	1	loss	A	-1	germline	1	0.0144939192924375	0.0370980155111955
17	26846866	26878936	3	gain	-	-1	germline	1	1.16227093501566e-08	1.48332712779364e-09
17	26936662	26940938	22	gain	AAAAAAAAAAAAAAABBBBBBB	6.41015	germline	1	0.0143075373218657	0.0366338006055416
17	41676034	41712380	2	neutral	AA	32.2574	somatic	0	0.493864244133745	0.561603056754325
17	44566610	44658544	2	neutral	AA	39.2737	somatic	0	2.64969130315037e-08	1.37864198712645e-06
17	61155352	61213078	2	neutral	AA	15.5924	somatic	0	0.0772661673392591	0.161072924102321
17	63990340	64129310	2	neutral	AA	18.1386	somatic	0	0.172227929449988	0.525350917360845
17	64343110	64385870	2	neutral	AA	100	somatic	0	0.00313347264546552	0.00417317462044353
17	75830584	75978106	2	neutral	AA	92.0757	somatic	0	1.31549788077921e-07	8.98693052309163e-07
17	78024172	78116106	2	neutral	AA	18.5702	somatic	0	0.818743885840207	0.605467619283885
17	80876264	80987440	2	neutral	AA	24.0025	germline	1	0.0156889101821423	0.0247202678172633
17	82584526	82586664	5	gain	AAABB	8.09159	germline	1	0.0832871245820013	0.270076235885371
17	82691426	82734186	2	neutral	AA	7.27981	somatic	0	0.0338043267305035	0.17333909674428
18	5306516	5308654	0	loss	-	-1	germline	1	0.0832708250884101	0.27004792831289
18	7489414	7506518	2	neutral	AA	27.2839	somatic	0	0.199139936483942	0.581751560545086
18	12261430	12297776	2	neutral	AA	29.6076	somatic	0	0.193660739790038	0.116601396789288
18	12297776	12336260	2	neutral	AA	70.8478	somatic	0	0.0330988557111726	0.0852706296025414
18	22547348	22664938	2	neutral	AA	10.9304	somatic	0	0.535062033302111	0.337710830627731
18	23359788	23455998	2	neutral	AA	25.9102	somatic	0	0.000354037689696531	0.00087210479882105
18	24631898	24651140	2	neutral	AA	36.3786	somatic	0	0.622587427276333	0.877058720432947
18	29594196	29596334	0	loss	-	-1	germline	1	0.0832729281036644	0.270051580781185
18	30490018	30492156	1	loss	A	-1	germline	1	0.0832860729237847	0.270074409525022
18	31084382	31095072	2	neutral	AA	54.5678	somatic	0	0.0744834829264016	0.0709164807033961
18	34058340	34105376	2	neutral	AA	48.231	somatic	0	0.352254402196838	0.623977721749459
18	38015778	38043572	2	neutral	AA	24.378	somatic	0	0.622789251694318	0.578442107278709
18	40679726	40686140	1	loss	A	-1	germline	1	0.00271767387750815	0.00498987864548739
18	41286918	41289056	1	loss	A	-1	germline	1	0.0832876504151434	0.270077149068942
18	41564858	41639688	2	neutral	AA	18.6839	somatic	0	0.784033707391386	0.775244446420834
18	42473508	42477784	1	loss	A	-1	germline	1	0.0144318619433915	0.036880594735165
18	44513160	44540954	2	neutral	AA	27.2839	somatic	0	0.541504874859757	0.901430740152763
18	44543092	44545230	1	loss	A	-1	somatic	0	0.0833029007461231	0.270103632372602
18	48701502	48707916	2	neutral	AA	27.2839	somatic	0	0.943428059744139	0.997247726486003
18	53426482	53430758	1	loss	A	-1	somatic	0	0.0143863688936417	0.0368373952003044
18	57279158	57281296	0	loss	-	-1	germline	1	0.0832692478552033	0.270045188985333
18	57734552	57749518	2	neutral	AA	54.5678	somatic	0	0.0936416901164237	0.185947953764113
18	59690822	59699374	2	neutral	AA	36.3786	somatic	0	0.391154782012329	0.773304027773256
18	61574400	61589366	2	neutral	AA	54.5678	somatic	0	0.568191210071933	0.53948982184821
18	66055648	66064200	1	loss	A	-1	germline	1	0.00054749098175088	0.000706133101453843
18	66363520	66508904	2	neutral	AA	100	somatic	0	0.844593226697612	0.812299662525934
18	66844570	66853122	2	neutral	AA	100	somatic	0	0.535232605775142	0.460628306676176
18	70975186	71047878	2	neutral	AA	21.8271	somatic	0	0.340046673797695	0.15690217671201
18	78111830	78118244	1	loss	A	-1	germline	1	0.00279618016700311	0.0052428402874668
18	79200072	79202210	5	gain	AAABB	11.3477	germline	1	0.083285021276325	0.270072583173668
18	79875680	79946234	2	neutral	AA	33.8524	somatic	0	0.0447713330014826	0.0421956318593163
19	7414584	7448792	2	neutral	AA	15.4198	somatic	0	0.0255998729967625	0.0551374357552123
19	7448792	7450930	7	gain	AAAAABB	6.36592	germline	1	0.0832808147940534	0.270065277858443
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19	11076978	11102634	2	neutral	AA	22.8049	somatic	0	0.0485190660532442	0.0502935485647567
19	11448990	11534510	2	neutral	AA	59.9946	somatic	0	0.000778872837225023	0.0100730528011658
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19	47703056	47758644	2	neutral	AA	9.9227	somatic	0	1.19447363050567e-09	3.38204057648284e-07
19	48427838	48543290	2	neutral	AA	17.4781	somatic	0	5.063284486303e-08	1.45945970309036e-06
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