chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	1097712	1100616	4	gain	-	-1	germline	1	0.0832744667054586	0.2700540920643
1	5665704	5677320	3	gain	-	-1	germline	1	0.000562570986178125	0.000767450179013474
1	16605072	16637016	7	gain	-	-1	germline	1	0.000532133810606615	0.000671048972223365
1	16721232	16939032	3	gain	-	-1	germline	1	2.07932363169355e-07	3.36574266235345e-08
1	31429992	31432896	6	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
1	34636008	34647624	1	loss	A	-1	somatic	0	0.00140666464271487	0.00157832831607907
1	55660968	55666776	1	loss	A	-1	somatic	0	0.018296627192553	0.0488707703563036
1	72297984	72347352	1	loss	A	-1	germline	1	3.17937364190923e-11	1.7519319328585e-13
1	93822432	93828240	1	loss	A	-1	germline	1	0.0254294503746102	0.071609422347827
1	105473280	105481992	1	loss	A	-1	somatic	0	0.00408306424880185	0.00936865954153876
1	124941696	124976544	3	gain	-	-1	germline	1	2.04134839333678e-07	3.06214896772516e-08
1	125069472	125162400	3	gain	-	-1	germline	1	2.14562966688257e-06	5.45311175581542e-06
1	125162400	125165304	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
1	152910120	153165672	2	neutral	AA	29.3718	germline	1	0.529666667714043	0.0584549554719198
1	169259640	169271256	1	loss	A	-1	germline	1	0.00102245908979706	0.00135993710958937
1	189793824	189822864	2	neutral	AA	65.3418	somatic	0	0.927546204932979	0.989710321162683
1	196824408	196911528	1	loss	A	-1	germline	1	7.18151223730366e-13	2.1094237467878e-15
1	201685704	201735072	2	neutral	AA	54.5679	somatic	0	0.345025157234685	0.342124008826323
1	209904024	209912736	1	loss	A	-1	somatic	0	0.00471521218626625	0.00736102398718064
1	224011656	224014560	7	gain	AAAAABB	8.74248	germline	1	0.0832702021908027	0.270046685572969
1	232137048	232189320	2	neutral	AA	36.3876	somatic	0	0.977671182610159	0.894925236389883
1	234776784	234782592	6	gain	AAAABB	4.42697	germline	1	0.014308233303245	0.0366347675434067
1	236095200	236098104	6	gain	AAAABB	19.6814	germline	1	0.0832716236760312	0.270049154386937
1	242051304	242062920	2	neutral	AA	100	somatic	0	0.623560445684238	0.887653694556402
1	247818648	247853496	2	neutral	AA	54.8373	somatic	0	0.018472480134901	0.0409091346231208
2	3179880	3182784	7	gain	AAAAABB	100	germline	1	0.0832694914555597	0.270045451172163
2	3182784	3330888	2	neutral	AA	37.9533	somatic	0	0.587065366268061	0.901764346279746
2	4164336	4175952	1	loss	A	-1	germline	1	0.00164528007691866	0.00155728383272125
2	6255216	6295872	2	neutral	AA	100	somatic	0	0.240931717084121	0.257412093782509
2	18289392	18298104	1	loss	A	-1	somatic	0	0.00738203251944979	0.0178436016867376
2	26295720	26452536	2	neutral	AA	46.347	somatic	0	0.212831865519704	0.229007079071448
2	26838768	26891040	2	neutral	AA	54.5678	somatic	0	0.962424233712843	0.903561617082474
2	32913936	32916840	5	gain	AAABB	5.3173	somatic	0	0.0832723344260167	0.270050388800099
2	35751144	35765664	1	loss	A	-1	germline	1	0.000244884686059317	0.00020761386525292
2	42857232	42892080	2	neutral	AA	100	somatic	0	0.359680207546307	0.39283599319768
2	62862888	62909352	2	neutral	AA	100	somatic	0	0.692525277442058	0.949017684785876
2	64352640	64378776	2	neutral	AA	17.3269	somatic	0	0.0546620749108476	0.161334342664022
2	76717872	76790472	2	neutral	AA	30.7691	somatic	0	0.038790138026952	0.111190896822831
2	76979232	77022792	2	neutral	AA	54.5681	somatic	0	0.0365014407000473	0.172858760858037
2	86481120	86550816	2	neutral	AA	100	somatic	0	0.895374087491771	0.594486490390126
2	89774256	89785872	6	gain	-	-1	germline	1	0.000532169347791809	0.00067109846480029
2	89788776	89797488	3	gain	AAA	73.0389	germline	1	0.0050720649073564	0.0152903612871331
2	89797488	89806200	4	gain	AABB	14.524	germline	1	0.00270062352273399	0.00495856698783681
2	89812008	89814912	5	gain	AAAAA	2.69507	germline	1	0.0832737559407304	0.270052857638781
2	89817816	89820720	5	gain	AAABB	86.7311	germline	1	0.0832723344260167	0.270050388800099
2	89820720	89826528	3	gain	AAB	32.0588	germline	1	0.014313841671097	0.0366476031511483
2	89826528	89841048	27	gain	AAAAAAAAAAAAAAAAAABBBBBBBBB	8.66411	germline	1	0.000107528509092151	9.08113701616475e-05
2	89841048	89843952	6	gain	AAABBB	62.257	germline	1	0.0832723344260167	0.270050388800099
2	89843952	89849760	4	gain	AAAB	52.8939	germline	1	0.0143095791347162	0.036637469449695
2	91412112	91415016	5	gain	-	-1	germline	1	0.0832737559407304	0.270052857638781
2	109199112	109202016	11	gain	AAAAAAABBBB	100	germline	1	0.0832687807252308	0.270044216775476
2	111914352	111955008	2	neutral	AA	100	somatic	0	0.640944781740774	0.917810701351456
2	112779744	113189208	2	neutral	AA	34.9852	somatic	0	0.258388482141589	0.107584986455184
2	117039912	117051528	1	loss	A	-1	germline	1	0.00170276184945612	0.00314919300623473
2	122601072	122618496	2	neutral	AA	54.5787	somatic	0	0.00916756961858901	0.0271628338687614
2	122836296	122920512	2	neutral	AA	94.8102	somatic	0	0.108472878530252	0.119297925925163
2	130822296	130912320	2	neutral	AA	37.239	somatic	0	0.443871378732515	0.643962322046021
2	136299240	136371840	2	neutral	AA	36.5733	somatic	0	0.66797985123808	0.831686437167626
2	146106048	146120568	1	loss	A	-1	germline	1	0.000360274780044402	0.000291736009484955
2	148176600	148211448	2	neutral	AA	100	somatic	0	0.398527496420746	0.325010973176917
2	152041824	152070864	2	neutral	AA	54.5678	somatic	0	0.88857195458548	0.346577651065395
2	164607432	164636472	2	neutral	AA	93.3662	somatic	0	0.518070519275377	0.671767845284891
2	169462920	169471632	1	loss	A	-1	germline	1	0.00538523263168988	0.00945896019605197
2	172032960	172047480	2	neutral	AA	100	somatic	0	0.154292204313253	0.486479043196461
2	176400576	176409288	1	loss	A	-1	germline	1	0.0203742378108009	0.0553957748884608
2	177628968	177634776	2	neutral	AA	100	somatic	0	0.0531744211218094	0.0982336646647182
2	193824576	193830384	1	loss	A	-1	somatic	0	0.0179143085945559	0.0422688857842393
2	208222608	208391040	2	neutral	AA	100	somatic	0	0.701333472912537	0.376531381030121
2	208391040	208637880	2	neutral	AA	46.6216	somatic	0	0.00352708709841794	0.00191517745592495
2	211205016	211318272	2	neutral	AA	27.0329	somatic	0	6.50798130153095e-06	0.000132699310712248
2	212180760	212325960	2	neutral	AA	27.1592	somatic	0	0.160681955840549	0.232060829554306
3	842160	877008	2	neutral	AA	25.8976	somatic	0	0.158863404753512	0.249516069287621
3	3818760	3847800	2	neutral	AA	100	somatic	0	0.387726706035819	0.24242342036789
3	12548184	12702096	2	neutral	AA	100	somatic	0	0.000262638353491764	0.00340188546893616
3	16915800	16927416	2	neutral	AA	100	somatic	0	0.00785305001480524	0.0110301316110558
3	34214928	34296240	2	neutral	AA	54.5786	somatic	0	0.0361007558923902	0.0456967546216691
3	40173936	40232016	2	neutral	AA	100	somatic	0	0.242494870447416	0.131902083017931
3	40687944	40853472	2	neutral	AA	100	somatic	0	0.190024711305729	0.307083451032699
3	46948968	46972200	2	neutral	AA	27.2853	somatic	0	0.589660014780995	0.774210978953518
3	47521056	47741760	2	neutral	AA	48.4621	somatic	0	0.00024586924330693	0.00130098079057051
3	61672248	61686768	2	neutral	AA	18.383	somatic	0	0.390069659167758	0.55329625271628
3	68691216	68699928	1	loss	A	-1	germline	1	0.00550132406373689	0.0099769983050676
3	75713088	75779880	2	neutral	AA	1.02744	somatic	0	0.0762967532088979	0.154227703802786
3	88031856	88121880	2	neutral	AA	49.4612	somatic	0	0.479070723006568	0.683662328044847
3	89353176	89367696	1	loss	A	-1	germline	1	0.000190805725234831	0.000243204423258425
3	90389904	90424752	2	neutral	AA	2.38202	somatic	0	0.131790946816666	0.0601542968486495
3	90668688	90712248	1	loss	A	-1	germline	1	1.17355360311424e-09	7.61479768129902e-12
3	96372144	96409896	2	neutral	AA	100	somatic	0	0.297076274873259	0.787733958746172
3	103135560	103170408	2	neutral	AA	54.5678	somatic	0	0.709182764302448	0.981786292806719
3	120786072	120803496	2	neutral	AA	100	somatic	0	0.992510918047793	0.97428316176808
3	128655912	128661720	1	loss	A	-1	somatic	0	0.0304522141060541	0.0585926376294188
3	128661720	128684952	3	gain	AAB	3.82025	germline	1	1.00473476513613e-06	2.66196887199754e-07
3	128684952	128696568	4	gain	AAAB	5.5311	germline	1	0.000532291770579797	0.000671185085044712
3	130401216	130482528	2	neutral	AA	93.0966	somatic	0	0.00729630405106276	0.0130621911292497
3	136821960	136981680	2	neutral	AA	100	somatic	0	0.0101756343651538	0.00137936935232341
3	139360056	139421040	2	neutral	AA	100	somatic	0	0.65901439640134	0.758196540537032
3	144476904	144505944	2	neutral	AA	100	somatic	0	0.3725831246021	0.259820394139088
3	146924976	148208544	2	neutral	AA	100	somatic	0	1.90046654375549e-11	5.09907334800275e-07
3	172857696	172909968	2	neutral	AA	100	somatic	0	0.509486302756558	0.748429866001656
3	191068680	191118048	2	neutral	AA	18.1896	somatic	0	0.769018963413787	0.820217695515725
3	191344560	191356176	1	loss	A	-1	germline	1	0.00276158188965028	0.00371547910058556
3	192924336	192950472	2	neutral	AA	54.6067	somatic	0	0.104441272365698	0.208921382127754
3	193156656	193168272	1	loss	A	-1	germline	1	0.00189966077082782	0.00159124790180809
4	2079264	2244792	2	neutral	AA	36.4617	somatic	0	0.5847820264937	0.515395049983439
4	6420744	6449784	2	neutral	AA	46.2892	somatic	0	0.393193337020006	0.752196384281167
4	18025128	18051264	2	neutral	AA	100	somatic	0	0.557489624947797	0.295411959556551
4	24689808	24701424	2	neutral	AA	100	somatic	0	0.0437202076354763	0.138878429802409
4	25189296	25273512	2	neutral	AA	100	somatic	0	0.114275707768385	0.280750748906467
4	35237136	35242944	0	loss	-	-1	germline	1	0.0152159271796136	0.0393839073912722
4	40293000	40295904	5	gain	AAABB	10.5295	germline	1	0.0832737559407304	0.270052857638781
4	47160960	47187096	2	neutral	AA	54.6587	somatic	0	0.0848327622365926	0.316292184434385
4	49083408	49089216	2	neutral	AA	100	somatic	0	0.111573132563267	0.237046863827805
4	57066504	57089736	2	neutral	AA	100	somatic	0	0.712609572983191	0.894241806252461
4	58376208	58387824	3	gain	AAB	6.22212	germline	1	0.000532801489210506	0.000671853650749288
4	61071120	61076928	1	loss	A	-1	germline	1	0.0208457884200476	0.056888062042212
4	63829920	63850248	1	loss	A	-1	germline	1	5.35526423647633e-05	3.52062515444063e-05
4	74412096	74435328	2	neutral	AA	100	somatic	0	0.316720372037498	0.422713398701802
4	74560200	74563104	0	loss	-	-1	germline	1	0.0832673592793155	0.270041747994465
4	81872472	81985728	2	neutral	AA	100	somatic	0	0.566260459350749	0.242481577757987
4	86934144	87012552	2	neutral	AA	38.8784	somatic	0	0.0111119947443097	0.0730385305759617
4	91153656	91159464	1	loss	A	-1	germline	1	0.0179552760948033	0.0460270111782684
4	95050824	95074056	2	neutral	AA	100	somatic	0	0.703018275916543	0.896147146394644
4	110450736	110465256	2	neutral	AA	100	somatic	0	0.512156594515175	0.154012021438819
4	119781288	119813232	2	neutral	AA	93.0731	somatic	0	0.0960059480727378	0.186522242947238
4	141886536	142287288	2	neutral	AA	100	somatic	0	0.296918872962177	0.175865276626408
4	147235704	147241512	2	neutral	AA	100	somatic	0	0.835737297647392	0.836149411700537
4	147868776	147897816	2	neutral	AA	55.0709	somatic	0	0.658266892353453	0.805942667206595
4	151594608	151614936	2	neutral	AA	100	somatic	0	0.379975227612567	0.633741363389586
4	151887912	152079576	2	neutral	AA	79.0361	somatic	0	0.00107855346029864	0.00298306345031973
4	152152176	152157984	2	neutral	AA	100	somatic	0	0.102603091436534	0.178421380636015
4	159798408	159844872	2	neutral	AA	100	somatic	0	0.182543982030682	0.364204849220553
4	163861104	163962744	2	neutral	AA	72.3394	somatic	0	0.587671658030954	0.812006698226156
4	164081808	164119560	2	neutral	AA	100	somatic	0	0.171095739212863	0.212195563934595
4	168077712	168083520	2	neutral	AA	100	somatic	0	0.181637444934662	0.346294287726457
4	168109656	168121272	2	neutral	AA	25.064	somatic	0	0.858603434013606	0.996010712780437
4	171879048	171942936	2	neutral	AA	83.4232	somatic	0	0.162593481532319	0.136841590441224
4	172503408	172512120	1	loss	A	-1	germline	1	0.00422336383088859	0.00781025010117609
4	176020152	176028864	2	neutral	AA	100	somatic	0	0.38986167895566	0.864915107146798
4	182522208	182528016	2	neutral	AA	100	somatic	0	0.0498012571273533	0.0823926379454701
4	184967376	184973184	2	neutral	AA	36.4134	somatic	0	0.134058812795271	0.361128319083599
5	12809544	12821160	1	loss	A	-1	germline	1	0.00141763347299639	0.00147481066216815
5	46269432	46275240	1	loss	A	-1	somatic	0	0.0205152700651059	0.0527108975612204
5	58027728	58036440	1	loss	A	-1	germline	1	0.00619805229973776	0.00907799542247567
5	86916720	86922528	1	loss	A	-1	somatic	0	0.0204959709312545	0.0557789072659965
5	92341392	92347200	1	loss	A	-1	somatic	0	0.020338329654857	0.0552812776031274
5	140716224	140724936	0	loss	-	-1	germline	1	0.014314178234825	0.036650981596559
5	141175056	141177960	5	gain	AAAAB	93.9924	germline	1	0.0832737559407304	0.270052857638781
5	143460504	143559240	2	neutral	AA	22.2285	germline	1	0.314259552488388	0.143209971014397
5	149390472	149422416	2	neutral	AA	54.5682	somatic	0	0.0806290810298339	0.305693176857728
5	150438816	150462048	2	neutral	AA	36.3841	somatic	0	0.512260831903461	0.654208314447327
5	158477088	158479992	2	neutral	AA	100	somatic	0	0.470470465202756	0.697332472913015
5	158930112	158933016	2	neutral	AA	100	somatic	0	0.848827668180343	0.917689088209939
5	161032608	161221368	2	neutral	AA	67.3985	germline	1	0.0337402630298381	0.0582755991322287
5	161378184	161410128	2	neutral	AA	100	somatic	0	0.532773861694371	0.583300747951096
5	162757584	162760488	2	neutral	AA	100	somatic	0	0.206020694071356	0.442768060951777
5	165101112	165179520	2	neutral	AA	18.1896	somatic	0	0.985106019562179	0.770485363489996
5	169611024	169631352	2	neutral	AA	36.4533	somatic	0	0.265733962047324	0.511155928210427
5	171835488	171838392	2	neutral	AA	100	somatic	0	0.721951431811084	0.860655892011051
5	180259992	180271608	2	neutral	AA	54.5678	somatic	0	0.576181318797862	0.729946643557506
5	181044072	181046976	4	gain	AAAB	24.1308	germline	1	0.0832744667054586	0.2700540920643
6	296208	383328	4	gain	AABB	0.721249	germline	1	2.26691902720466e-19	0
6	10091400	10105920	2	neutral	AA	100	somatic	0	0.871683604152299	0.843009941727007
6	17127792	17165544	2	neutral	AA	48.0496	somatic	0	0.0462884500210698	0.0646737867280713
6	17592432	17615664	2	neutral	AA	100	somatic	0	0.644449266793213	0.842761488373825
6	17691168	17708592	2	neutral	AA	100	somatic	0	0.759471332782361	0.824301278385121
6	19041528	19050240	1	loss	A	-1	germline	1	0.00478852702575546	0.0100860746696292
6	20775216	21010440	2	neutral	AA	27.9756	somatic	0	0.69986999013906	0.31489556344416
6	24483624	24553320	2	neutral	AA	73.8323	somatic	0	0.124184327124997	0.300321911342601
6	27100128	27236616	2	neutral	AA	17.2661	somatic	0	0.719373133192207	0.583571529995456
6	27660600	27692544	3	gain	AAB	13.3497	germline	1	9.53024730762355e-09	6.52093157249567e-10
6	32487048	32565456	0	loss	-	-1	germline	1	5.0789470345643e-10	2.65122368503512e-11
6	32574168	32577072	3	gain	AAB	0.898987	germline	1	0.0833391668698015	0.270166442028478
6	32643864	32655480	1	loss	A	-1	germline	1	0.0315720234658273	0.0617982015078191
6	35725008	35765664	2	neutral	AA	27.2896	somatic	0	0.853644669820235	0.63122943857391
6	39787704	39808032	2	neutral	AA	100	somatic	0	0.967591935138929	0.999257405647054
6	40147800	40368504	2	neutral	AA	41.7564	somatic	0	2.80236677565491e-06	4.67117486607771e-05
6	41312304	41318112	2	neutral	AA	100	somatic	0	0.810213407592347	0.976042745192053
6	42209640	42221256	2	neutral	AA	100	somatic	0	0.999956204549192	0.938360998208146
6	47343912	47352624	2	neutral	AA	100	somatic	0	0.859788199895651	0.891416345424252
6	49187952	49193760	2	neutral	AA	100	somatic	0	0.759007434562391	0.933210022660668
6	52960248	52968960	2	neutral	AA	100	somatic	0	0.952580717352421	0.999752611907703
6	54621336	54676512	2	neutral	AA	54.8597	somatic	0	0.645479221676418	0.804628922935405
6	57310440	57330768	2	neutral	AA	14.6698	somatic	0	0.670872637078217	0.864488584122509
6	66106656	66118272	2	neutral	AA	100	somatic	0	0.744231467781139	0.685275839012021
6	67227600	67306008	2	neutral	AA	100	somatic	0	0.440557891316372	0.771897509999764
6	76729488	76744008	1	loss	A	-1	germline	1	0.00110425375739327	0.00156068230427564
6	80443704	80542440	2	neutral	AA	100	somatic	0	0.0839767036035544	0.0803491596160942
6	80998368	81088392	2	neutral	AA	92.7369	somatic	0	0.0127264410613984	0.0631712350585525
6	94589088	94638456	2	neutral	AA	55.0709	somatic	0	0.263878910048762	0.581122285732054
6	103289472	103315608	1	loss	A	-1	germline	1	4.49060643858751e-06	1.12236569316249e-06
6	108656064	108673488	2	neutral	AA	100	somatic	0	0.124719903319712	0.0858732378517242
6	113903592	114103968	2	neutral	AA	100	somatic	0	0.442560562033119	0.335261763469082
6	122089968	122104488	2	neutral	AA	100	somatic	0	0.737478229327284	0.868327551244129
6	147694536	147703248	2	neutral	AA	100	somatic	0	0.201461520133967	0.377226599806468
6	157312584	157315488	5	gain	AAABB	4.10056	germline	1	0.0832723344260167	0.270050388800099
6	159664824	159667728	0	loss	-	-1	germline	1	0.0832673592793155	0.270041747994465
6	163405176	163440024	2	neutral	AA	54.8569	somatic	0	0.0104822950249069	0.0466791016931306
6	165310200	165318912	0	loss	-	-1	germline	1	0.0143128320217965	0.0366516573183393
6	168283896	168298416	2	neutral	AA	37.3442	somatic	0	0.454379740944654	0.572155953763214
7	752136	937992	2	neutral	AA	12.1344	somatic	0	0.0179107897819141	0.00894399948505176
7	2520672	2651352	2	neutral	AA	48.3847	somatic	0	0.151557061731439	0.226749156955964
7	8787504	8825256	1	loss	A	-1	germline	1	4.20370308305788e-09	1.62141189363751e-10
7	9760344	9766152	1	loss	A	-1	germline	1	0.0203627717573767	0.0553266656396547
7	10756416	10814496	2	neutral	AA	100	somatic	0	0.487776241961102	0.621044503659072
7	14731992	14787168	2	neutral	AA	100	somatic	0	0.00994764674394016	0.0234086836119676
7	16131720	16134624	0	loss	-	-1	germline	1	0.0832687807252308	0.270044216775482
7	22331760	22395648	2	neutral	AA	33.9641	somatic	0	0.483291238671495	0.274308956776072
7	26095344	26106960	1	loss	A	-1	germline	1	0.00122177836298861	0.0016217206078547
7	33567336	33584760	2	neutral	AA	100	somatic	0	0.201617545745449	0.217282481025403
7	40330752	40417872	2	neutral	AA	57.4501	somatic	0	0.0618411004397461	0.161398911556587
7	46998336	47120304	2	neutral	AA	100	somatic	0	0.525535370911679	0.402606833053717
7	50712552	50718360	2	neutral	AA	100	somatic	0	0.233989102118514	0.692178832127282
7	54394824	54397728	1	loss	A	-1	somatic	0	0.0833085891920398	0.270113349333058
7	57409176	57420792	1	loss	A	-1	somatic	0	0.00181147451949741	0.00167846688676654
7	57484680	57499200	3	gain	AAB	4.21935	germline	1	0.000108400939556292	9.27137182651361e-05
7	57905760	57917376	1	loss	A	-1	germline	1	0.00178448855109557	0.00197176131778498
7	58056768	61108872	2	neutral	AA	6.01264	somatic	0	3.45462869432601e-18	1.11022302462516e-16
7	61959744	62357592	2	neutral	AA	2.8165	somatic	0	2.1103228772985e-07	4.46423283340103e-07
7	62401152	62406960	4	gain	-	-1	germline	1	0.0143089062050228	0.0366357807378338
7	62438904	62456328	3	gain	AAB	2.70727	germline	1	5.20270583987796e-05	0.000107390744543356
7	65223840	65229648	1	loss	A	-1	germline	1	0.0209417642805752	0.0571820821072194
7	66034056	66097944	2	neutral	AA	36.3787	somatic	0	0.0576637427699634	0.0306795376235777
7	80998368	81070968	2	neutral	AA	22.7786	somatic	0	0.494579808086748	0.879159436836034
7	85374696	85429872	2	neutral	AA	27.6047	somatic	0	0.824215635691175	0.88390103800441
7	87308760	87320376	1	loss	A	-1	germline	1	0.000827014717183634	0.00110023400325066
7	87419112	87427824	2	neutral	AA	100	somatic	0	0.178515218326215	0.403760227243588
7	89109240	89173128	2	neutral	AA	28.4791	somatic	0	0.412589875221174	0.141409032073326
7	91394688	91403400	2	neutral	AA	100	somatic	0	0.0912827930415783	0.133841558847893
7	96912288	96918096	1	loss	A	-1	germline	1	0.0182784694711978	0.0488005087271556
7	98689536	98736000	2	neutral	AA	27.3194	somatic	0	0.81892109688629	0.598132175479525
7	100475496	100498728	2	neutral	AA	36.3842	somatic	0	0.0741583447798556	0.0587650323334362
7	100728144	100739760	1	loss	A	-1	germline	1	0.00131364362616411	0.00171072533483874
7	100948848	100957560	3	gain	AAB	0.832473	germline	1	0.00270250408763062	0.0049622709639241
7	100957560	100960464	9	gain	AAAAABBBB	23.4096	germline	1	0.0832687807252308	0.270044216775476
7	100960464	100972080	4	gain	AABB	0.541946	germline	1	0.000532552500061086	0.000671866037481483
7	101128896	101140512	2	neutral	AA	100	somatic	0	0.0520758777470198	0.107310764185461
7	101265384	101491896	2	neutral	AA	3.19505	germline	1	2.11714922150436e-05	0.000199180414946376
7	106100544	106103448	4	gain	AABB	32.1129	somatic	0	0.0832780206028147	0.270060264253677
7	108737376	108769320	2	neutral	AA	54.8528	somatic	0	0.034233789926189	0.0422254747801285
7	109829280	109898976	2	neutral	AA	100	somatic	0	0.00676174911446857	0.00859443716751662
7	110247456	110514624	2	neutral	AA	39.8578	somatic	0	0.00271572573730965	0.00513016605355687
7	110540760	110549472	1	loss	A	-1	somatic	0	0.0075083471389579	0.00947738705107803
7	125809992	125821608	2	neutral	AA	100	somatic	0	0.873816076381723	0.948482196710288
7	143846736	143849640	4	gain	AABB	7.38912	germline	1	0.0832751774751012	0.270055326493937
7	151347768	151402944	2	neutral	AA	24.0744	somatic	0	0.827208968466683	0.501727011442919
7	152355456	152401920	2	neutral	AA	41.2113	somatic	0	0.165926145120896	0.468491283561723
7	152401920	152407728	11	gain	AAAAAAAAABB	2.80428	germline	1	0.0143072240029177	0.0366330789405092
7	152416440	152422248	2	neutral	AA	18.2598	somatic	0	0.245406277559942	0.608861223516903
7	152846232	152875272	2	neutral	AA	8.28077	somatic	0	0.797535678062866	0.806558326737075
7	154600248	154608960	1	loss	A	-1	germline	1	0.00558241128129308	0.00816446593651576
7	155326248	155337864	3	gain	AAB	2.90149	somatic	0	0.00731970627795097	0.0231143399757513
7	158148936	158151840	4	gain	AABB	9.62123	somatic	0	0.0832773098135148	0.270059029807564
7	158912688	158915592	4	gain	AAAB	6.78359	somatic	0	0.0832780206028147	0.270060264253677
7	159203088	159205992	6	gain	AAAABB	53.7613	germline	1	0.0832723344260167	0.270050388800099
8	6110016	6115824	1	loss	A	-1	germline	1	0.0173610652048433	0.0459471392267727
8	39375336	39529248	1	loss	A	-1	germline	1	3.75945282202888e-30	0
8	42331608	42337416	1	loss	A	-1	germline	1	0.0144324051965819	0.0370106456772251
8	43237656	43240560	10	gain	-	-1	germline	1	0.0832687807252308	0.270044216775476
8	43240560	43243464	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
8	45976128	45987744	2	neutral	AA	6.41985	germline	1	0.929398416204513	0.998557236473631
8	51365952	51380472	2	neutral	AA	100	somatic	0	0.06726286593212	0.117874557320483
8	66373824	66449328	2	neutral	AA	100	germline	1	0.0727063857769026	0.027091337586432
8	68589576	68601192	2	neutral	AA	54.8599	somatic	0	0.915115568522805	0.921674512976072
8	74449848	74455656	0	loss	-	-1	germline	1	0.014314178234825	0.0366519951833171
8	95097288	95123424	2	neutral	AA	100	germline	1	0.625553871897397	0.387425866829313
8	97408872	97435008	2	neutral	AA	46.2892	somatic	0	0.757991584160146	0.770150224607856
8	109567920	109582440	2	neutral	AA	100	somatic	0	0.156426203681987	0.104285807344789
8	111281280	111284184	0	loss	-	-1	germline	1	0.0832730451809164	0.270051623217386
8	120013608	120028128	2	neutral	AA	100	somatic	0	0.70732945820256	0.923875113172475
8	122017368	122023176	2	neutral	AA	54.5678	somatic	0	0.457576362758941	0.402886119101065
8	122322288	122357136	2	neutral	AA	73.9925	somatic	0	0.0764847922300628	0.190026338645661
8	124015320	124029840	2	neutral	AA	55.071	somatic	0	0.850672203158457	0.896755154917091
8	133409760	133430088	2	neutral	AA	36.3786	somatic	0	0.546367113394574	0.751368435446824
8	136668048	136851000	1	loss	A	-1	germline	1	1.32331235390511e-37	0
8	138346560	138361080	2	neutral	AA	100	somatic	0	0.990330495007179	0.946224010018611
8	138616632	138718272	2	neutral	AA	18.1959	somatic	0	0.0602684109753489	0.167984176154956
8	139958280	139964088	1	loss	A	-1	germline	1	0.0219808278371846	0.0602602449495246
8	143620224	143631840	1	loss	A	-1	germline	1	0.00338630504809996	0.00591880975501713
8	144125520	144128424	5	gain	AAABB	26.1602	germline	1	0.0832723344260167	0.270050388800099
8	145063512	145069320	7	gain	AAAABBB	58.1785	germline	1	0.0143080090088556	0.0366354430036341
9	879912	897336	2	neutral	AA	100	somatic	0	0.893911964776201	0.987546439507108
9	3589344	3603864	2	neutral	AA	100	germline	1	0.962823024710665	0.614587770928506
9	22497288	22503096	1	loss	A	-1	germline	1	0.017323411601821	0.0431382522247372
9	28189128	28192032	4	gain	AAAA	11.0789	somatic	0	0.0832773098135148	0.270059029807564
9	33793848	33878064	2	neutral	AA	1.15029	somatic	0	0.0801575704692848	0.116070885226601
9	40867992	40873800	4	gain	AABB	5.44366	germline	1	0.0143094669778287	0.0366371317018744
9	40926072	40928976	7	gain	AAAAABB	3.80608	germline	1	0.0832702021908027	0.270046685572969
9	42386784	42389688	5	gain	AAAAA	30.193	germline	1	0.0832723344260167	0.270050388800099
9	72541920	72547728	2	neutral	AA	100	somatic	0	0.364560358932683	0.539566700725439
9	81399120	81474624	2	neutral	AA	100	somatic	0	0.000908374186621426	0.00464798469180028
9	82758192	82766904	1	loss	A	-1	germline	1	0.00310466969750645	0.0055354819645248
9	92477880	92530152	2	neutral	AA	100	somatic	0	0.940088839570263	0.577638821394318
9	95439960	95457384	2	neutral	AA	100	somatic	0	0.130905282916908	0.123446298830316
9	95840712	95846520	2	neutral	AA	100	somatic	0	0.630437192236463	0.486064502936977
9	120803496	121465608	2	neutral	AA	84.8235	somatic	0	0.705212433037162	0.42898107426239
9	128650104	128664624	2	neutral	AA	100	germline	1	0.0154941522312733	0.0119318175738977
9	129158304	129164112	2	neutral	AA	54.5685	somatic	0	0.639089384995267	0.657572795380772
9	129422568	129445800	2	neutral	AA	0.172319	germline	1	0.000186527798600808	0.0016166666182591
9	130049832	130070160	2	neutral	AA	22.0151	somatic	0	0.0130010948934068	0.0276164157702428
9	130743888	130755504	2	neutral	AA	54.5678	germline	1	0.169238251748032	0.298235015220234
9	131513448	131522160	2	neutral	AA	56.8775	somatic	0	0.18666927555932	0.480968715968217
9	136418304	136485096	2	neutral	AA	57.6587	somatic	0	0.12551632941835	0.0809700242577189
9	137359200	137362104	0	loss	-	-1	germline	1	0.0832780206028147	0.270060264253682
9	137713488	137719296	3	gain	AAA	100	somatic	0	0.0143150757722281	0.0366533466704758
9	137719296	137728008	2	neutral	AA	100	somatic	0	0.110004477043028	0.126548159761531
10	3301848	3473184	2	neutral	AA	5.17281	somatic	0	0.841253639609691	0.617720211015221
10	3937824	3998808	2	neutral	AA	100	somatic	0	0.82440146477141	0.558977423668115
10	6382992	6388800	2	neutral	AA	100	somatic	0	0.795772751336889	0.753250537938545
10	10251120	10291776	2	neutral	AA	100	somatic	0	0.660215336001619	0.54959575034979
10	26255064	26287008	2	neutral	AA	100	somatic	0	0.316074549231179	0.673327944408863
10	26568696	26594832	2	neutral	AA	0.538007	germline	1	0.0088893926180956	0.015149505793621
10	26623872	26658720	2	neutral	AA	0.453629	germline	1	0.201513904755489	0.173336403699487
10	37139256	37150872	2	neutral	AA	2.56018	somatic	0	0.0532379047930951	0.151470687440746
10	38483808	38524464	3	gain	AAB	0.597656	somatic	0	1.28079544578024e-10	1.45222722736094e-11
10	38524464	38530272	11	gain	AAAAAAAAAAB	4.65616	somatic	0	0.0143076725730871	0.0366344298173791
10	38573832	38576736	3	gain	AAB	100	somatic	0	0.0833292103488769	0.270149155198446
10	38576736	38579640	6	gain	AAAABB	79.3783	somatic	0	0.0832716236760312	0.270049154386937
10	38579640	38811960	3	gain	AAB	2.35436	somatic	0	1.97767140785245e-10	1.42477141196196e-11
10	38811960	38814864	4	gain	AABB	7.05612	germline	1	0.0832773098135148	0.270059029807564
10	38814864	38835192	5	gain	AAAAB	100	germline	1	4.59583466013811e-06	1.66388938704909e-06
10	39558288	39561192	0	loss	-	-1	somatic	0	0.0832652271472979	0.27003804485383
10	41820504	41843736	2	neutral	AA	3.23684	germline	1	0.374341744657718	0.743968769345158
10	41858256	41898912	40	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1.79403	somatic	0	2.20943483539688e-05	1.22904640400545e-05
10	42299664	42322896	3	gain	AAA	3.3482	somatic	0	9.7350646378201e-07	2.3159246809179e-07
10	46516272	46559832	4	gain	AABB	0.388999	germline	1	9.14465612538389e-11	1.38589140163958e-12
10	50224680	50233392	2	neutral	AA	100	somatic	0	0.499156870551697	0.779666695187199
10	54879792	55539000	2	neutral	AA	21.3845	germline	1	0.0475635393738536	0.274980240161984
10	58039344	58048056	2	neutral	AA	100	somatic	0	0.0404251326110172	0.044070241395625
10	66768768	66815232	2	neutral	AA	58.1677	somatic	0	0.342510618468611	0.49249070250606
10	93264864	93308424	2	neutral	AA	100	somatic	0	0.224613993945509	0.0856449447729274
10	103248816	103251720	4	gain	AAAB	28.5249	somatic	0	0.0832780206028147	0.270060264253677
10	103826712	103835424	2	neutral	AA	100	somatic	0	0.487369835095389	0.605019081550779
10	109954152	109962864	2	neutral	AA	100	somatic	0	0.548395955460628	0.313100401740092
10	115030344	115071000	2	neutral	AA	100	somatic	0	0.0235240490125183	0.0402433044885966
10	128464248	128467152	10	gain	AAAAAAAAAA	52.4016	germline	1	0.0832687807252308	0.270044216775476
10	132248160	132285912	2	neutral	AA	21.0151	somatic	0	0.898469313960416	0.90417242932897
10	132364320	132367224	4	gain	AAAA	27.8804	germline	1	0.0832744667054586	0.2700540920643
11	5764440	5787672	1	loss	A	-1	germline	1	2.70620529395715e-06	1.15949254642089e-06
11	18681432	18695952	2	neutral	AA	100	somatic	0	0.936524004759635	0.974871838138891
11	18922464	18939888	3	gain	AAB	4.41754	germline	1	2.21594414762106e-05	1.23245007465078e-05
11	26504808	26554176	2	neutral	AA	100	somatic	0	0.653867642457833	0.625479809255981
11	42947256	42950160	3	gain	AAB	8.17651	somatic	0	0.0832808638091588	0.270065202079319
11	48822048	48938208	2	neutral	AA	2.88368	somatic	0	0.043041670689606	0.0584473707479755
11	50175312	50178216	0	loss	-	-1	germline	1	0.0832822854418177	0.270067671016859
11	50686416	50808384	2	neutral	AA	67.6662	somatic	0	0.0697669692957744	0.0272200010080784
11	55117920	55123728	1	loss	A	-1	germline	1	0.0183935255430984	0.0448108889380161
11	55599984	55684200	1	loss	A	-1	germline	1	2.009361669498e-15	0
11	58826328	58832136	1	loss	A	-1	germline	1	0.0216331406315998	0.0593703429673983
11	72138264	72184728	2	neutral	AA	14.5207	somatic	0	0.85452952695991	0.877313980321595
11	80295600	80313024	2	neutral	AA	36.4448	somatic	0	0.564346751463037	0.714835244760272
11	84099840	84279888	2	neutral	AA	100	somatic	0	0.0095001807117907	0.00318981205726632
11	90320208	90540912	1	loss	A	-1	germline	1	1.20822484862577e-43	0
11	90540912	90680304	2	neutral	AA	83.6017	somatic	0	0.114033546630847	0.420550682890296
11	90909720	91083960	2	neutral	AA	30.2182	somatic	0	0.764761598892368	0.72276677956516
11	95323800	96003336	2	neutral	AA	21.9569	somatic	0	0.0902237848853616	0.104234903503203
11	96563808	96566712	0	loss	-	-1	germline	1	0.0832652271472979	0.27003804485383
11	103123944	103225584	2	neutral	AA	100	somatic	0	0.045141915557651	0.078172119690149
11	106419984	106446120	2	neutral	AA	100	somatic	0	0.00506696458852338	0.0221741552865994
11	110090640	110174856	2	neutral	AA	100	somatic	0	0.0524984085265094	0.130449718642446
12	2253504	2256408	6	gain	-	-1	germline	1	0.0832716236760312	0.270049154386937
12	18094824	18100632	1	loss	A	-1	germline	1	0.0272323971277142	0.0553566199755836
12	33233376	33242088	1	loss	A	-1	germline	1	0.00307653125659475	0.00565712367457505
12	37691016	37699728	1	loss	A	-1	germline	1	0.00740487920766367	0.00944105921288707
12	37699728	37752000	2	neutral	AA	4.96549	somatic	0	0.000313375231842404	0.00269361058145512
12	43234752	43394472	2	neutral	AA	54.5887	somatic	0	0.661170947748553	0.734696603678019
12	45508584	45517296	1	loss	A	-1	germline	1	0.00674688130546414	0.00947404554418929
12	49786176	49882008	2	neutral	AA	17.6911	germline	1	0.606937967452152	0.518776512039748
12	50288568	50448288	2	neutral	AA	19.989	somatic	0	0.000834919465447275	1.48809544021633e-05
12	51273024	51281736	2	neutral	AA	76.8522	somatic	0	0.938600821597009	0.87744362343967
12	52347504	52495608	2	neutral	AA	11.0578	germline	1	0.00322044364730338	0.00468097009619795
12	55199232	55312488	2	neutral	AA	54.5678	somatic	0	0.728780971564536	0.500465497268189
12	56035584	56140128	2	neutral	AA	36.3839	somatic	0	0.0560138880668672	0.0903101122627133
12	59540712	59552328	1	loss	A	-1	germline	1	0.0012299402637027	0.00159821744599675
12	60127320	60133128	1	loss	A	-1	germline	1	0.0199087966323068	0.0539193373829183
12	79761264	79769976	3	gain	AAB	11.7693	germline	1	0.00270870615052146	0.00497841967220558
12	80359488	80432088	2	neutral	AA	100	germline	1	0.147888996891729	0.466468076640608
12	104973792	104979600	1	loss	A	-1	germline	1	0.0223324553386579	0.0560743464174529
12	117251904	117414528	2	neutral	AA	40.9024	somatic	0	0.806414868633318	0.779628916400549
12	123239952	123274800	2	neutral	AA	36.3786	somatic	0	0.646415849897378	0.848122875600973
12	127700496	127784712	2	neutral	AA	40.3665	somatic	0	0.0286184266868819	0.0737859279835568
12	127892160	127941528	2	neutral	AA	100	somatic	0	0.657001183014517	0.941920998709045
12	128342280	128359704	2	neutral	AA	100	somatic	0	0.290390346294489	0.370833915537832
12	130703232	130717752	2	neutral	AA	54.5678	somatic	0	0.961910269653246	0.979984440714455
13	19317408	19363872	2	neutral	AA	100	somatic	0	0.00124252129370938	0.00158374231801228
13	19962096	19965000	2	neutral	AA	100	somatic	0	0.20051199945314	0.436145922691961
13	20020176	20023080	2	neutral	AA	100	somatic	0	0.197512499948532	0.432524615459114
13	20391888	20394792	1	loss	A	-1	somatic	0	0.125128548528095	0.336525946772862
13	21056904	21065616	2	neutral	AA	54.5681	somatic	0	0.687548453059732	0.766257554857832
13	21724824	21948432	2	neutral	AA	31.6555	somatic	0	0.0508458915381301	0.156750625226507
13	22018128	22023936	1	loss	A	-1	germline	1	0.0195775529116643	0.0528723336194941
13	22073304	22076208	3	gain	-	-1	somatic	0	0.0834726060299198	0.270398657677626
13	27178536	27181440	2	neutral	AA	100	somatic	0	0.733021053832041	0.866312507890718
13	27454416	27457320	2	neutral	AA	100	somatic	0	0.562332671250304	0.764859091987789
13	27474744	27541536	2	neutral	AA	44.3362	somatic	0	0.708244687799559	0.517254712708786
13	28009080	28017792	2	neutral	AA	54.5678	somatic	0	0.813255158957126	0.979248133974741
13	28409832	28552128	2	neutral	AA	100	somatic	0	0.849440628924399	0.707030104589628
13	31380624	31392240	2	neutral	AA	100	somatic	0	0.914692775134038	0.999250254595269
13	31775568	31781376	2	neutral	AA	100	somatic	0	0.246158471205089	0.443020663200956
13	32051448	32054352	2	neutral	AA	100	somatic	0	0.504702091558547	0.723599835329794
13	35934096	35937000	3	gain	-	-1	somatic	0	0.0846356209274396	0.272410669074651
13	35997984	36050256	2	neutral	AA	100	somatic	0	0.0427740949365237	0.169320011774246
13	37496448	37510968	1	loss	A	-1	germline	1	0.000465529133438953	0.000273372212153844
13	38483808	38486712	0	loss	-	-1	germline	1	0.0832737559407304	0.270052857638786
13	40621152	40658904	2	neutral	AA	54.5681	somatic	0	0.707415871853953	0.870358275273267
13	40690848	40931880	2	neutral	AA	93.3662	somatic	0	0.246466870410661	0.571247643910364
13	41021904	41091600	2	neutral	AA	100	somatic	0	0.019213191995407	0.0130913311791413
13	44765160	44770968	2	neutral	AA	100	germline	1	0.109120683791317	0.213540214627446
13	45093312	45096216	2	neutral	AA	54.5678	somatic	0	0.268538862880987	0.512934157249733
13	47526864	47529768	2	neutral	AA	100	somatic	0	0.694185911943113	0.845931800595191
13	48322560	48325464	2	neutral	AA	100	somatic	0	0.876825949277623	0.928004107244022
13	53294208	53297112	2	neutral	AA	100	somatic	0	0.135378203923884	0.35131450467063
13	54377400	54380304	2	neutral	AA	54.5678	somatic	0	0.706712560668222	0.852682363214244
13	55266024	55268928	2	neutral	AA	100	somatic	0	0.0928848059346669	0.286370790153966
13	58884408	58896024	2	neutral	AA	54.5686	somatic	0	0.737602997706899	0.94680497649124
13	59584272	59610408	2	neutral	AA	100	somatic	0	0.443409201334551	0.599377161351728
13	63028416	63060360	3	gain	AAB	0.412714	somatic	0	3.20464393343983e-06	2.98176575519449e-06
13	63060360	63069072	4	gain	AAAB	4.93267	germline	1	0.00270076656715271	0.00495884126949975
13	65421312	65491008	2	neutral	AA	93.3662	somatic	0	0.849736480763684	0.806818373980404
13	66129888	66222816	2	neutral	AA	100	somatic	0	0.644235816901342	0.656065818001247
13	68670888	68694120	1	loss	A	-1	germline	1	3.27955576669247e-06	9.57426189995836e-07
13	70816944	70819848	2	neutral	AA	54.5678	somatic	0	0.351788178859479	0.595659453975052
13	75634680	75637584	2	neutral	AA	100	somatic	0	0.127322975786012	0.339731650116428
13	77287056	77356752	2	neutral	AA	100	somatic	0	0.095201370276087	0.105067542209442
13	77833008	77835912	2	neutral	AA	100	germline	1	0.169273425090649	0.39717322005979
13	78675168	78718728	2	neutral	AA	100	somatic	0	0.655848039225398	0.516211282298078
13	78907488	78939432	2	neutral	AA	100	somatic	0	0.175986844573315	0.554851488522823
13	81765024	81805680	2	neutral	AA	54.5686	germline	1	0.108082423467966	0.161352085294931
13	84375720	84378624	2	neutral	AA	100	somatic	0	0.349362292598571	0.593395583051873
13	87549792	87581736	2	neutral	AA	61.0689	somatic	0	0.213216972004992	0.341750854305369
13	89146992	89176032	2	neutral	AA	32.1515	somatic	0	0.509397574926022	0.312765101975898
13	89841048	89855568	2	neutral	AA	100	somatic	0	0.924546104317326	0.551886848943996
13	89983344	89989152	2	neutral	AA	54.5873	somatic	0	0.0789681568711781	0.164470968490478
13	90247608	90250512	2	neutral	AA	36.3786	somatic	0	0.257736733836573	0.501366407252732
13	92739240	92742144	2	neutral	AA	54.5678	somatic	0	0.715867274290575	0.857541261461818
13	93049968	93052872	2	neutral	AA	100	somatic	0	0.977414080894134	0.958490061025587
13	95364456	95367360	2	neutral	AA	100	germline	1	0.112035913997306	0.316895003988609
13	102940992	102943896	2	neutral	AA	100	somatic	0	0.98295289309373	0.959872772028812
13	105946632	105961152	2	neutral	AA	54.5678	somatic	0	0.0258983043808647	0.0581973295205115
13	106353192	106364808	2	neutral	AA	100	somatic	0	0.334601510324146	0.742614382700625
13	111304512	111313224	2	neutral	AA	28.1838	somatic	0	0.506821321910718	0.776026425974465
13	112753608	112779744	2	neutral	AA	20.7753	somatic	0	0.797300744216558	0.805519104786165
13	112930752	112933656	3	gain	AAB	52.9457	germline	1	0.0832837070941348	0.270070139970863
13	113409912	113415720	2	neutral	AA	14.4373	germline	1	0.704163767493611	0.586737420216882
13	113822280	113828088	2	neutral	AA	5.67305	somatic	0	0.633680561964233	0.648278487430558
13	114179472	114231744	2	neutral	AA	6.42198	germline	1	0.514481077030086	0.367159069523502
14	16093968	16096872	8	gain	-	-1	germline	1	0.0832694914555597	0.270045451172163
14	18658200	18661104	5	gain	AAAAB	11.5866	germline	1	0.0832723344260167	0.270050388800099
14	18681432	18693048	3	gain	AAB	15.5724	germline	1	0.00270491786812393	0.00496618346779509
14	20720040	20792640	2	neutral	AA	100	somatic	0	0.269918102222537	0.178512185733118
14	21175968	21187584	2	neutral	AA	54.5678	somatic	0	0.135292721037786	0.242644806851869
14	22561176	22564080	2	neutral	AA	100	somatic	0	0.136541548044118	0.35295956111429
14	22569888	22578600	2	neutral	AA	100	somatic	0	0.892983456863768	0.939794423601133
14	24454584	24483624	2	neutral	AA	9.18722	somatic	0	0.515847804934605	0.225832478545315
14	26005320	26008224	2	neutral	AA	100	somatic	0	0.156391110336077	0.380237905193722
14	26792304	26957832	2	neutral	AA	37.5502	somatic	0	0.00557159578534633	0.00407330676248063
14	30901464	30904368	2	neutral	AA	100	somatic	0	0.974187439484629	0.957666779901713
14	34348512	34351416	1	loss	A	-1	germline	1	0.0833405893085937	0.270168911641537
14	35945712	35948616	4	gain	AAAA	6.75911	germline	1	0.0832744667054586	0.2700540920643
14	35951520	36006696	2	neutral	AA	45.3079	somatic	0	0.383319000282307	0.652028658350296
14	37298976	37301880	1	loss	A	-1	germline	1	0.0836033659804791	0.270624837226997
14	40629864	40632768	2	neutral	AA	71.3319	somatic	0	0.470642320620411	0.697484874196377
14	41140968	41193240	1	loss	A	-1	germline	1	1.80251785390095e-11	9.84767822842514e-14
14	41199048	41201952	1	loss	A	-1	germline	1	0.123795705472043	0.334567516997427
14	50422152	50430864	2	neutral	AA	7.79991	germline	1	0.463341048583403	0.482885768196018
14	61280208	61315056	2	neutral	AA	100	somatic	0	0.362304273759848	0.628617335385974
14	64669176	64683696	2	neutral	AA	54.5689	germline	1	0.847492568252643	0.563850265624225
14	68293368	68351448	2	neutral	AA	100	somatic	0	0.0967597164538639	0.31481802663239
14	69533376	69582744	2	neutral	AA	100	somatic	0	0.799444283183242	0.956625089591878
14	72826512	72864264	2	neutral	AA	54.5697	germline	1	0.8622484692912	0.877286124514385
14	73630920	73633824	2	neutral	AA	100	somatic	0	0.567386183374223	0.768285878589817
14	73689000	73691904	2	neutral	AA	100	somatic	0	0.199452786824998	0.434868281097837
14	74182680	74185584	2	neutral	AA	100	somatic	0	0.626263939191708	0.806457925225136
14	74243664	74249472	2	neutral	AA	54.5777	somatic	0	0.424517531665914	0.631982319277253
14	74664744	74690880	2	neutral	AA	54.5678	somatic	0	0.992723175905718	0.677466343587625
14	74690880	75146808	2	neutral	AA	100	somatic	0	0.186818456778815	0.0464556464560719
14	75187464	75190368	2	neutral	AA	100	somatic	0	0.138294107669357	0.355429111840716
14	78056616	78123408	2	neutral	AA	55.071	somatic	0	0.175204307603667	0.182435942893933
14	81245208	81282960	2	neutral	AA	54.6208	somatic	0	0.655231546476307	0.468630213829141
14	82032192	82038000	1	loss	A	-1	somatic	0	0.0144934288809248	0.037189579321483
14	82418424	82459080	3	gain	AAB	5.98287	germline	1	9.16809477274859e-11	1.39233069518241e-12
14	82732056	82734960	2	neutral	AA	100	somatic	0	0.778824777971306	0.888347781318339
14	90270840	90285360	2	neutral	AA	54.5678	somatic	0	0.999448033496613	0.899659681433148
14	91403400	91406304	2	neutral	AA	100	somatic	0	0.940895162053534	0.94858570127169
14	92797320	92800224	2	neutral	AA	100	somatic	0	0.323179056858323	0.568446851498772
14	95062440	95065344	2	neutral	AA	100	somatic	0	0.97197344376754	0.957086314703613
14	96372144	96377952	2	neutral	AA	54.5678	somatic	0	0.995227563342747	0.989973911583447
14	99191928	99218064	2	neutral	AA	54.5693	somatic	0	0.174895223025825	0.102220824625586
14	99418440	99421344	3	gain	-	-1	somatic	0	0.0832929483133761	0.270086188573523
14	101718408	101727120	1	loss	A	-1	germline	1	0.00781833153681846	0.0117695191085536
14	102104640	102139488	2	neutral	AA	100	somatic	0	0.905517755891719	0.92713866051479
14	102583800	102601224	2	neutral	AA	70.2665	somatic	0	0.299682194195318	0.388150540528698
14	104032896	104035800	2	neutral	AA	100	somatic	0	0.358092017278219	0.601501422860797
14	105348408	105354216	2	neutral	AA	20.6758	somatic	0	0.980913086456227	0.94176205634172
14	105502320	105511032	2	neutral	AA	54.5678	somatic	0	0.240123634651275	0.454458957022781
15	22244640	22250448	3	gain	AAB	5.02497	germline	1	0.014315187967894	0.0366465896706589
15	25758480	25761384	4	gain	AAAB	46.0511	somatic	0	0.0832751774751012	0.270055326493937
15	27306312	27309216	0	loss	-	-1	germline	1	0.0832822854418177	0.270067671016859
15	40519512	40592112	2	neutral	AA	100	somatic	0	0.0806802579937069	0.0885686383478583
15	65461968	65496816	2	neutral	AA	54.8373	somatic	0	0.00330583960194832	0.00214824252221524
15	65766888	65790120	2	neutral	AA	54.5678	somatic	0	0.000663739857541806	0.00152211362751709
15	71415168	71418072	1	loss	A	-1	germline	1	0.0833043232619307	0.270105941655475
15	94040232	94054752	2	neutral	AA	6.69673	somatic	0	0.704276597342229	0.869322709986971
16	911856	937992	2	neutral	AA	49.0166	somatic	0	0.281756229808464	0.176524793182568
16	1025112	1028016	4	gain	AAAA	39.5491	germline	1	0.0832780206028147	0.270060264253677
16	1783056	1785960	2	neutral	AA	100	germline	1	0.234190179483456	0.475372700185625
16	3310560	3322176	2	neutral	AA	100	somatic	0	0.0394232244748609	0.164599230787331
16	19317408	19349352	2	neutral	AA	100	somatic	0	0.837165457165206	0.801039592346031
16	20566128	20569032	1	loss	A	-1	germline	1	0.0834836447397813	0.27041719179393
16	21559296	21582528	3	gain	AAB	4.34048	germline	1	9.67993082371949e-07	2.25943455722799e-07
16	22415976	22424688	2	neutral	AA	100	somatic	0	0.381339365123292	0.426671708180497
16	22613448	22694760	3	gain	AAB	1.43952	germline	1	2.31046402435123e-19	0
16	22694760	22697664	3	gain	AAB	73.7985	germline	1	0.0833526808323449	0.270189904017729
16	31482264	31949808	2	neutral	AA	63.8887	somatic	0	0.00348601173255001	0.00185423635787185
16	31949808	34061016	2	neutral	AA	-1	somatic	0	NA	NA
16	34061016	34063920	11	gain	AAAAAAABBBB	17.1364	germline	1	0.0832687807252308	0.270044216775476
16	34063920	34075536	2	neutral	AA	-1	somatic	0	NA	NA
16	34075536	34084248	3	gain	AAB	61.386	germline	1	0.00390185489693692	0.00930808228692404
16	34084248	34087152	7	gain	AAAAAAA	10.0656	germline	1	0.0832702021908027	0.270046685572969
16	34095864	34098768	8	gain	AAAAABBB	3.4225	germline	1	0.0832694914555597	0.270045451172163
16	34098768	34101672	3	gain	AAB	36.1534	germline	1	0.0832901047728363	0.270081250467795
16	34101672	34952544	2	neutral	AA	1.34407	somatic	0	1.08304077699717e-17	4.9737991503207e-14
16	35992176	36088008	2	neutral	AA	15.9012	germline	1	0.105781196413038	0.022796035811721
16	36122856	36125760	4	gain	-	-1	germline	1	0.0832744667054586	0.2700540920643
16	56857416	56869032	2	neutral	AA	54.5678	germline	1	0.388761106325607	0.7342488838788
16	57020040	57031656	2	neutral	AA	18.5019	somatic	0	0.468837886461311	0.620006727152505
16	63937368	63951888	2	neutral	AA	100	somatic	0	0.17362671830195	0.490691078579863
16	68537304	68543112	2	neutral	AA	100	somatic	0	0.272618209483403	0.406083535360591
16	69518856	69559512	2	neutral	AA	100	somatic	0	0.548301941431255	0.761264106313626
16	70149024	70163544	3	gain	AAB	2.87815	germline	1	0.000108381488684993	9.26091789636985e-05
16	72152784	72199248	2	neutral	AA	100	somatic	0	0.540928553613481	0.126632303572682
16	78338304	78349920	1	loss	A	-1	germline	1	0.000725819602393111	0.00104976864521944
16	78831984	78843600	2	neutral	AA	100	germline	1	0.266991904069245	0.458169893492705
16	79316952	79392456	2	neutral	AA	100	somatic	0	0.834015289018002	0.983247641417055
16	80943192	80951904	1	loss	A	-1	germline	1	0.00535482080557805	0.00975784975365601
16	83614872	83652624	2	neutral	AA	100	somatic	0	0.297178621032051	0.611141793599529
16	83972064	83983680	2	neutral	AA	54.5678	somatic	0	0.0363030415605543	0.0545033051261499
16	84927480	84933288	2	neutral	AA	84.1895	somatic	0	0.264131953803667	0.401267995085096
16	89068584	89080200	2	neutral	AA	32.1407	somatic	0	0.128860275536418	0.299970530087173
17	3714216	3717120	2	neutral	AA	100	somatic	0	0.0961663419295218	0.291773625136812
17	5061672	5082000	2	neutral	AA	100	somatic	0	0.959111152826782	0.867729245819664
17	6304584	6307488	2	neutral	AA	100	somatic	0	0.607267521549203	0.794583395914862
17	6725664	6902808	1	loss	A	-1	germline	1	3.09585063758684e-32	0
17	7524264	7527168	2	neutral	AA	100	somatic	0	0.666302383778548	0.830350519427184
17	8659728	8674248	2	neutral	AA	29.7201	somatic	0	0.0907124270364945	0.0778333809599604
17	9452520	9455424	2	neutral	AA	54.5678	somatic	0	0.534541552566643	0.745378681446653
17	9597720	9632568	2	neutral	AA	100	somatic	0	0.0298246457236868	0.0692103756041289
17	13053480	13056384	2	neutral	AA	100	somatic	0	0.360803445926292	0.603997237078345
17	16817064	16819968	4	gain	AABB	12.3221	germline	1	0.0832751774751012	0.270055326493937
17	17877024	17969952	2	neutral	AA	54.5681	somatic	0	0.958316939336597	0.768427366717069
17	19819800	19822704	2	neutral	AA	100	somatic	0	0.867710888405016	0.924757147040952
17	21292128	21303744	4	gain	AABB	0.233677	germline	1	0.000532232530470364	0.000671110838479261
17	21675456	21681264	3	gain	-	-1	somatic	0	0.0143239416200614	0.0366790332119781
17	21814848	21858408	4	gain	-	-1	somatic	0	0.000107570278078836	9.08406762387681e-05
17	21858408	21884544	3	gain	-	-1	germline	1	2.07348221317722e-07	3.30077697396902e-08
17	21884544	21968760	1	loss	A	-1	germline	1	2.90402782836894e-20	0
17	21977472	21991992	9	gain	-	-1	germline	1	0.00270019443101442	0.00495801846623056
17	22122672	22154616	6	gain	AAAABB	0.243324	germline	1	9.22378897736773e-09	5.58332269307016e-10
17	22157520	22160424	4	gain	AABB	9.24322	germline	1	0.0832773098135148	0.270059029807564
17	26783592	26809728	3	gain	-	-1	germline	1	9.65986219064994e-07	2.25701984657434e-07
17	26812632	26815536	6	gain	-	-1	germline	1	0.0832716236760312	0.270049154386937
17	26815536	26827152	4	gain	-	-1	germline	1	0.000532422120448607	0.000671655492147871
17	26827152	26864904	3	gain	-	-1	germline	1	2.51273081645018e-09	2.30881092022628e-10
17	26864904	26867808	6	gain	-	-1	germline	1	0.0832716236760312	0.270049154386937
17	26867808	26876520	3	gain	-	-1	germline	1	0.00270864468026537	0.00498172405033726
17	26876520	26879424	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
17	26937504	26940408	17	gain	AAAAAAAAAAAABBBBB	26.7708	germline	1	0.0832687807252308	0.270044216775476
17	27396336	27399240	2	neutral	AA	100	somatic	0	0.258069277266738	0.501769255559113
17	28444680	28473720	2	neutral	AA	100	somatic	0	0.289048038683863	0.306266937445715
17	39514728	39546672	2	neutral	AA	100	somatic	0	0.500250489369853	0.751603929464468
17	41172912	41193240	2	neutral	AA	21.8293	somatic	0	0.848600976759444	0.604858441619154
17	41596896	41634648	2	neutral	AA	44.2443	somatic	0	0.528748506668087	0.543878533991755
17	42023784	42026688	2	neutral	AA	100	somatic	0	0.214228138361049	0.452437863484865
17	42958872	43136016	2	neutral	AA	45.8384	somatic	0	0.00787294253200268	0.0033974165149282
17	43745856	43754568	2	neutral	AA	100	somatic	0	0.291120956249887	0.599532265841188
17	51406608	51415320	2	neutral	AA	100	somatic	0	0.576635164462124	0.607996787584771
17	51665064	51673776	2	neutral	AA	100	somatic	0	0.546339054687285	0.670080661858347
17	56337600	56340504	2	neutral	AA	100	somatic	0	0.405929722242397	0.644184563240683
17	61619976	62014920	2	neutral	AA	27.6643	somatic	0	2.54854465711742e-08	5.64041791051295e-09
17	62392440	62592816	2	neutral	AA	100	somatic	0	0.255289590919377	0.31290037291818
17	62682840	62694456	2	neutral	AA	100	somatic	0	0.343870302230303	0.706840190979371
17	63719568	63725376	2	neutral	AA	100	somatic	0	0.745668485561755	0.963123547345815
17	63838632	63856056	2	neutral	AA	54.5678	somatic	0	0.578520791513224	0.931717990372969
17	64407816	64422336	2	neutral	AA	47.1398	somatic	0	0.34227371719192	0.669585127785195
17	66629376	66640992	2	neutral	AA	100	somatic	0	0.301354274356773	0.308481742864116
17	67988448	67991352	2	neutral	AA	100	somatic	0	0.296879289323367	0.542311771373975
17	73784832	73802256	2	neutral	AA	38.9811	somatic	0	0.329922343942485	0.72910178505933
17	74888352	74937720	2	neutral	AA	54.5679	somatic	0	0.568597772906798	0.738825559509415
17	79255968	79293720	2	neutral	AA	36.6814	somatic	0	0.72902148213267	0.673648801124295
17	79517328	79587024	2	neutral	AA	100	somatic	0	0.416201875854583	0.707125605412644
17	81413640	81428160	2	neutral	AA	21.1682	germline	1	0.696979259613884	0.970666287178192
17	81503664	81506568	1	loss	A	-1	somatic	0	0.120516842056587	0.329712169190198
17	81814392	81817296	2	neutral	AA	100	germline	1	0.0943250112764696	0.288745011152467
17	82659456	82711728	2	neutral	AA	6.51749	somatic	0	0.545963671515117	0.598158799925075
18	5305608	5308512	1	loss	A	-1	germline	1	0.0836176277655759	0.270649564667114
18	10454400	10463112	2	neutral	AA	100	somatic	0	0.970914523271348	0.966812282228482
18	11508552	11511456	1	loss	A	-1	somatic	0	0.113308065069593	0.318842231347377
18	12083544	12092256	2	neutral	AA	3.21653	somatic	0	0.0397750815866816	0.16947174889225
18	14778456	14923656	2	neutral	AA	3.44113	somatic	0	0.0374331863061148	0.105738530110701
18	21277608	21344400	2	neutral	AA	18.486	somatic	0	0.243014124055182	0.250379240568943
18	22816728	22863192	2	neutral	AA	54.6836	somatic	0	0.474333242271729	0.453225862570574
18	22947408	22961928	2	neutral	AA	54.5679	somatic	0	0.513009565475177	0.66924212175087
18	29594664	29597568	1	loss	A	-1	germline	1	0.0833100112080657	0.270115818591871
18	38518656	38521560	2	neutral	AA	100	somatic	0	0.759864323556772	0.879559845646853
18	39851592	39854496	2	neutral	AA	100	somatic	0	0.919901608474918	0.942308776083707
18	40679232	40687944	1	loss	A	-1	germline	1	0.0143238293638789	0.0366786951289472
18	41283264	41289072	1	loss	A	-1	germline	1	0.0151267697149167	0.0391023697862891
18	41347152	41350056	1	loss	A	-1	somatic	0	0.0918797410387425	0.284691011500931
18	44358600	44364408	1	loss	A	-1	somatic	0	0.0255314070776936	0.0570430907802376
18	49701960	49948800	2	neutral	AA	2.57407	somatic	0	0.186014905575855	0.499183968308496
18	51243984	51252696	2	neutral	AA	100	somatic	0	0.240255567062618	0.159633366978591
18	51557616	51577944	2	neutral	AA	40.5192	germline	1	0.00560713371320891	0.0437367788382532
18	52225536	52231344	2	neutral	AA	36.3786	germline	1	0.96136354973723	0.984898470156011
18	56665752	56694792	2	neutral	AA	36.7205	germline	1	0.882120922488997	0.854095587559892
18	57278496	57281400	1	loss	A	-1	germline	1	0.0833206769549885	0.270134338558145
18	57481776	57519528	2	neutral	AA	100	somatic	0	0.00911409767652479	0.0896332888483965
18	63998352	64027392	2	neutral	AA	44.4182	somatic	0	0.255271831714635	0.462931182003942
18	64544304	64547208	1	loss	A	-1	somatic	0	0.0916925317944974	0.284379484780902
18	65888856	65909184	2	neutral	AA	100	somatic	0	0.450737222168637	0.807200276967338
18	71540040	71545848	2	neutral	AA	72.5771	somatic	0	0.226135038118281	0.519912439961811
18	75318144	75332664	2	neutral	AA	100	somatic	0	0.233735918526232	0.58588047025967
18	75785688	75803112	2	neutral	AA	84.3203	somatic	0	0.0905840108473677	0.17701009555907
18	79520232	79523136	1	loss	A	-1	germline	1	0.0872416670952404	0.276876905758607
19	566280	569184	1	loss	A	-1	somatic	0	0.0833220991381445	0.270136807957005
19	1890504	1902120	2	neutral	AA	54.5678	somatic	0	0.0111335568125788	0.0337054017661215
19	7448760	7451664	11	gain	AAAAAAABBBB	100	germline	1	0.0832687807252308	0.270044216775476
19	8871720	8906568	2	neutral	AA	0.720391	germline	1	0.00506628061346106	0.0567303103145088
19	10858056	10956792	2	neutral	AA	100	somatic	0	0.0044812816887097	0.0214963376640019
19	10971312	11000352	2	neutral	AA	54.5678	somatic	0	0.140858969174734	0.0740166126205888
19	11531784	11549208	2	neutral	AA	54.5678	somatic	0	0.336335273549774	0.507298119798054
19	12583032	12588840	0	loss	-	-1	germline	1	0.0143114859204527	0.0366394959938289
19	15614808	15655464	2	neutral	AA	60.5296	somatic	0	0.019119637583624	0.0349104804836933
19	16056216	16062024	2	neutral	AA	19.5601	somatic	0	0.985396261425206	0.997793152001942
19	19726872	19729776	1	loss	A	-1	germline	1	0.0833043232619307	0.270105941655475
19	24329712	24405216	4	gain	AABB	0.340572	germline	1	2.16033656582885e-17	0
19	27248232	27323736	2	neutral	AA	2.2568	germline	1	0.422363828300915	0.7051938857287
19	27338256	27341160	4	gain	AAAB	3.15281	germline	1	0.0832744667054586	0.2700540920643
19	27344064	27346968	3	gain	AAB	2.96497	germline	1	0.0832858396094698	0.27007384343277
19	27346968	27358584	6	gain	AAAABB	0.416561	germline	1	0.000532165399106472	0.000671061345046797
19	27358584	27378912	5	gain	AAABB	0.36743	germline	1	0.000107556090668786	9.08260220773283e-05
19	27378912	27381816	3	gain	AAB	3.00503	germline	1	0.0832872613109331	0.270076312427969
19	27381816	27399240	5	gain	AAABB	0.34363	germline	1	2.21018930253401e-05	1.22935236509525e-05
19	28764120	28781544	2	neutral	AA	100	somatic	0	0.0231530889985182	0.0306853365871093
19	36451008	36488760	2	neutral	AA	100	somatic	0	0.609388032326838	0.497565257780112
19	43214424	43339296	1	loss	A	-1	germline	1	2.1065559442057e-08	9.24052945272535e-10
19	45700248	45732192	2	neutral	AA	27.3282	somatic	0	0.123542828936382	0.156556037911501
19	48711696	48732024	2	neutral	AA	100	somatic	0	0.468926096232113	0.876945501437663
19	49100832	49118256	2	neutral	AA	54.5678	somatic	0	0.432775195830907	0.448715339657264
19	55414128	55457688	2	neutral	AA	32.0268	germline	1	0.390143774227088	0.190968975355199
19	56099472	56140128	2	neutral	AA	16.401	germline	1	0.164473364655088	0.236597794180057
20	22082016	22084920	1	loss	A	-1	germline	1	0.0834572962282306	0.270371475983765
20	26316048	26321856	0	loss	-	-1	germline	1	0.0143112615810864	0.0366469274947654
20	28781544	28787352	8	gain	-	-1	germline	1	0.0143074482864517	0.0366334166556407
20	28801872	28804776	4	gain	-	-1	germline	1	0.0832751774751012	0.270055326493937
20	28804776	28822200	9	gain	-	-1	germline	1	2.20977190743484e-05	1.22918237770442e-05
20	28952880	28955784	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
20	29263608	29266512	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
20	29266512	29281032	3	gain	-	-1	germline	1	0.0006371135486757	0.00104517051450137
20	29286840	29312976	4	gain	-	-1	germline	1	9.66048656068106e-07	2.26761314725543e-07
20	29408808	29411712	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
20	29873448	29893776	7	gain	-	-1	germline	1	0.00270031702229122	0.00495829272008064
20	30939216	30942120	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
20	31066992	31069896	73	gain	-	-1	germline	1	0.0832659378530564	0.270039279229917
20	31162824	31165728	3	gain	-	-1	germline	1	0.0837360766342898	0.270854866030686
20	31165728	31168632	6	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
20	31168632	31183152	3	gain	-	-1	germline	1	0.00011308790754397	0.000105873010573854
20	31183152	31188960	17	gain	-	-1	germline	1	0.0143069997224852	0.0366330789405092
20	31188960	31241232	3	gain	-	-1	germline	1	2.21483386521999e-05	1.23227967678829e-05
20	31241232	31244136	45	gain	-	-1	germline	1	0.0832666485637289	0.270040513610129
20	36747216	36750120	2	neutral	AA	100	somatic	0	0.097404555721211	0.293796477082482
20	37063752	37066656	2	neutral	AA	100	somatic	0	0.175972263574361	0.405774891986904
20	43687776	43696488	2	neutral	AA	36.3786	somatic	0	0.0686992850209782	0.147871921068365
20	44021736	44024640	2	neutral	AA	100	somatic	0	0.609225430046338	0.7957896690821
20	45267552	45273360	2	neutral	AA	54.571	somatic	0	0.875341856610092	0.881630565498685
20	46786344	46792152	2	neutral	AA	43.6386	somatic	0	0.0204647875238874	0.0555414853451481
20	47468784	47567520	2	neutral	AA	40.2225	somatic	0	0.010280368850988	0.0373341766234864
20	47762088	47764992	2	neutral	AA	100	somatic	0	0.825957180085878	0.908669997155382
20	48055392	48058296	2	neutral	AA	100	somatic	0	0.861343229086932	0.922406644434891
20	48339984	48348696	2	neutral	AA	100	germline	1	0.125340002070965	0.266327960176752
20	49440600	49443504	2	neutral	AA	100	somatic	0	0.326762040713076	0.571886059642787
20	49757136	49760040	2	neutral	AA	100	germline	1	0.642434434951913	0.816285066488657
20	50860656	50863560	2	neutral	AA	100	somatic	0	0.323046123527293	0.568277615101628
20	53111256	53137392	2	neutral	AA	100	somatic	0	0.646578472314956	0.954431388673788
20	53361000	53363904	2	neutral	AA	100	somatic	0	0.114241141753517	0.320272166306431
20	55228272	55242792	2	neutral	AA	54.5731	somatic	0	0.891711855691015	0.652242615359801
20	56192400	56230152	2	neutral	AA	62.081	somatic	0	0.331722138062049	0.369716763689515
20	56389872	56392776	2	neutral	AA	100	somatic	0	0.505395860714447	0.724082015886776
20	56793528	56796432	2	neutral	AA	100	somatic	0	0.388342996187256	0.628821351269913
20	59947272	59970504	2	neutral	AA	54.5873	somatic	0	0.0398229707618641	0.0597416365174015
20	60336408	60339312	2	neutral	AA	100	somatic	0	0.173533424435723	0.402671378456851
20	60902688	60928824	2	neutral	AA	22.0484	somatic	0	0.659049292814244	0.552702647375986
20	61274400	61286016	2	neutral	AA	15.6331	somatic	0	0.306762108116821	0.506932187495042
20	61686768	61689672	2	neutral	AA	100	somatic	0	0.183093866641837	0.414757490777428
20	62052672	62055576	2	neutral	AA	36.3786	somatic	0	0.908675633474796	0.938766169781448
20	62064288	62067192	1	loss	A	-1	germline	1	0.0837096636210906	0.270809096254556
20	62334360	62337264	2	neutral	AA	100	somatic	0	0.399054471141549	0.638213285445799
20	62499888	62505696	2	neutral	AA	14.1399	somatic	0	0.855215525284987	0.984879311591915
20	63028416	63051648	2	neutral	AA	49.4541	somatic	0	0.556700066391673	0.489772504839357
20	63350760	63359472	2	neutral	AA	100	somatic	0	0.320164178958539	0.747120236436319
20	63847344	63850248	2	neutral	AA	100	somatic	0	0.715867274290575	0.857541261461818
20	63989640	64024488	2	neutral	AA	100	somatic	0	0.0473517939876436	0.0259128362969379
21	0	8990784	7	gain	AAAAABB	-1	germline	1	0.000107538752898607	9.08176492790957e-05
21	8990784	10738992	7	gain	AAAAABB	0.453101	somatic	0	2.5342730119117e-23	0
21	14101824	14104728	2	neutral	AA	100	germline	1	0.39486713187203	0.63458691884693
21	15620616	15626424	2	neutral	AA	100	somatic	0	0.73717111072473	0.982947685482699
21	15812280	15815184	2	neutral	AA	18.1893	germline	1	0.840354020062039	0.914408587041965
21	15855840	15893592	2	neutral	AA	36.3787	somatic	0	0.446834412678952	0.436190265930491
21	20473200	20476104	2	neutral	AA	100	germline	1	0.884089813804657	0.930556652876525
21	20882664	20897184	2	neutral	AA	100	somatic	0	0.419032154526461	0.491782750218726
21	21660936	21689976	2	neutral	AA	27.4346	somatic	0	0.0745583453524896	0.0752482568255827
21	31740720	31845264	2	neutral	AA	29.959	somatic	0	0.751151887391171	0.60582889101968
21	33686400	33692208	2	neutral	AA	54.848	germline	1	0.879488128145009	0.821732014125038
21	34354320	34365936	2	neutral	AA	39.8116	germline	1	0.725765711461151	0.644669688424981
21	37060848	37214760	2	neutral	AA	48.0172	somatic	0	0.597156953755933	0.60451280377899
21	37676496	37691016	2	neutral	AA	46.2315	somatic	0	0.687306378565044	0.942662316858189
21	42836904	42857232	2	neutral	AA	26.8887	germline	1	0.0959827018864231	0.168380282707897
21	42909504	42912408	2	neutral	AA	100	somatic	0	0.835561354233834	0.912513100583565
21	43333488	43339296	3	gain	AAA	30.6516	somatic	0	0.0143748735399584	0.0368165203821653
21	44419584	44422488	2	neutral	AA	31.8183	germline	1	0.562856575612093	0.765242708021531
21	44582208	44590920	2	neutral	AA	54.5689	somatic	0	0.469977282261337	0.823263701635249
21	45043944	45055560	2	neutral	AA	76.4964	somatic	0	0.4513644435098	0.916472371921161
21	45520200	45543432	2	neutral	AA	11.0283	somatic	0	0.132384379632694	0.0603171177461026
22	17874120	17879928	3	gain	AAA	3.93134	germline	1	0.0143194519780186	0.0366611185678107
22	18730800	18733704	4	gain	AABB	100	germline	1	0.0832773098135148	0.270059029807564
22	19076376	19099608	2	neutral	AA	36.714	somatic	0	0.228530591662726	0.275089174385599
22	22346280	22372416	2	neutral	AA	1.226	somatic	0	0.153732403094412	0.39944907543149
22	28703136	28772832	2	neutral	AA	54.5789	somatic	0	0.430978791206716	0.0466502187639639
22	29118408	29121312	4	gain	AAAB	100	germline	1	0.0832780206028147	0.270060264253677
22	39982272	40051968	2	neutral	AA	53.3461	somatic	0	0.527860357902163	0.467792024779545
22	40051968	40304616	2	neutral	AA	61.5761	somatic	0	0.00385101338136314	0.00568315839029532
22	41506872	41605608	2	neutral	AA	100	somatic	0	0.225995375105605	0.214330321313421
22	47605272	47715624	2	neutral	AA	13.216	somatic	0	0.0272383450022077	0.0340797463558874
22	50642856	50645760	4	gain	AABB	21.328	germline	1	0.0832773098135148	0.270059029807564
X	63252024	63286872	2	gain	-	-1	germline	1	0.958536776993186	0.94150417241718
X	78268608	78271512	3	gain	-	-1	somatic	0	0.0844859353469463	0.272152365933974
X	79665432	79671240	0	loss	-	-1	germline	1	0.0143091305118188	0.0366394959938289
Y	10651872	10759320	3	gain	-	-1	germline	1	9.66395599060078e-07	2.25885146698523e-07
Y	10759320	10762224	9	gain	-	-1	germline	1	0.0832694914555597	0.270045451172163
Y	10762224	10794168	3	gain	-	-1	somatic	0	3.37582051566136e-08	2.93185014044184e-08
Y	10794168	10802880	5	gain	-	-1	germline	1	0.00270062352273399	0.00495884126949975
Y	10802880	10901616	2	gain	-	-1	somatic	0	7.62774828115611e-05	2.43669490177512e-05
Y	10921944	10924848	2	gain	-	-1	germline	1	NA	NA
Y	10924848	10927752	5	gain	-	-1	germline	1	0.0832723344260167	0.270050388800099
Y	10927752	10985832	3	gain	-	-1	somatic	0	6.52379808576036e-06	4.77058463843605e-08
Y	10985832	10988736	9	gain	-	-1	germline	1	0.0832687807252308	0.270044216775476
Y	10988736	10997448	3	gain	-	-1	germline	1	0.0349102610490011	0.139066200576643
Y	10997448	11000352	8	gain	-	-1	germline	1	0.0832694914555597	0.270045451172163
Y	11003256	11038104	2	gain	-	-1	somatic	0	0.0684397065768919	0.0177163642291458
Y	11038104	11041008	2	gain	AA	19.7785	germline	1	0.181939151598538	0.413312507743755
Y	11290752	11334312	17	gain	AAAAAAAAAAABBBBBB	0.544657	somatic	0	4.32277439479543e-08	4.12496836688092e-09
Y	11494032	11528880	2	gain	AA	7.13344	somatic	0	0.00447020691080125	0.000377287540687776
Y	11528880	11531784	9	gain	AAAAAAAAB	100	germline	1	0.0832694914555597	0.270045451172163
Y	11685696	11691504	5	gain	AAAAA	7.71519	germline	1	0.0143086819013285	0.0366361184747578
Y	11691504	11714736	2	gain	AA	78.4572	somatic	0	0.0147819055392311	0.0286079471249402
Y	11714736	11720544	3	gain	AAA	10.2498	germline	1	0.0143727341175423	0.0368250010564464
Y	11720544	11723448	41	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	100	germline	1	0.0832666485637289	0.270040513610129
Y	11723448	11735064	2	gain	AA	3.97437	somatic	0	0.528596490896438	0.272164155855521
Y	11735064	11746680	3	gain	AAB	2.81933	germline	1	0.0135959488179209	0.125994893783967
Y	11746680	11749584	11	gain	AAAAAAABBBB	5.82997	germline	1	0.0832687807252308	0.270044216775476
Y	26635488	26641296	3	gain	AAB	18.3116	germline	1	0.0288496572306213	0.0828010356259006
Y	56825472	56851608	13	gain	AAAAAAAAABBBB	13.3671	somatic	0	4.59427588484706e-06	1.66356729458528e-06
