chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	15527568	16167816	2	neutral	AA	9.16784	somatic	0	2.06456404659664e-46	0
1	58414860	58809576	2	neutral	AA	10.7454	somatic	0	0.0605514935264019	0.0230812948456941
1	64546944	64562484	2	neutral	AA	54.5678	somatic	0	0.362181147167377	0.55462686942777
1	78094716	78309168	2	neutral	AA	30.3987	somatic	0	0.0382612262519661	0.00593790699825958
1	84282744	84295176	2	neutral	AA	36.3806	somatic	0	0.895053822238557	0.569144368026047
1	99219792	99247764	2	neutral	AA	72.6259	somatic	0	0.0914756297784993	0.0450004650141094
1	153898836	153905052	1	loss	A	-1	somatic	0	0.0185567946983558	0.0443560620517903
1	153905052	153982752	2	neutral	AA	36.3786	germline	1	7.97119859840785e-09	7.73070418680355e-07
1	163179324	163347156	2	neutral	AA	34.9998	somatic	0	0.0432573362588598	0.00180672100862622
1	193992036	194128788	2	neutral	AA	57.4656	somatic	0	0.00400348436445831	0.00205691714492184
1	204310596	204357216	2	neutral	AA	54.5787	somatic	0	0.0573403682204296	0.197874286285223
1	224012208	224015316	6	gain	AAAAAA	1.35539	germline	1	0.0832768182138396	0.270058125427248
1	234775212	234781428	6	gain	AAAABB	5.96168	germline	1	0.0143096391360413	0.0366379941661111
1	236714604	236913516	2	neutral	AA	100	somatic	0	0.838698836263366	0.317999972891263
1	246949248	247169916	2	neutral	AA	26.8679	germline	1	2.75791529707024e-12	3.37545547068885e-11
1	248907288	248925936	3	gain	-	-1	somatic	0	0.000538663038844952	0.000681059635460612
2	0	80808	3	gain	-	-1	somatic	0	2.39186322672954e-15	0
2	25006968	25010076	1	loss	A	-1	somatic	0	0.0869232228838548	0.276334732585049
2	25010076	25019400	2	neutral	AA	54.5679	somatic	0	0.00776625852758344	0.014888064898697
2	26445972	26452188	2	neutral	AA	27.2839	somatic	0	0.746851326793913	0.848957582148689
2	29687616	29728020	2	neutral	AA	100	somatic	0	0.000284725829983667	0.0012166797399672
2	32913720	32916828	11	gain	AAAAAABBBBB	11.7884	germline	1	0.0832668229798127	0.270040765937363
2	52633980	52665060	2	neutral	AA	100	somatic	0	0.0465891243797525	0.140140752378155
2	89771472	89793228	3	gain	AAB	26.6055	germline	1	0.000370516880182874	6.83975354562882e-05
2	89793228	89827416	3	gain	AAB	1.03839	germline	1	4.59948536552003e-07	9.80021529817243e-07
2	89827416	89842956	16	gain	AAAAAAAAAAABBBBB	9.16474	germline	1	0.000107526517442096	9.08100473021589e-05
2	89842956	89852280	4	gain	AAAB	1.12673	germline	1	0.00270252654821164	0.00496125069030373
2	96957168	97668900	2	neutral	AA	21.8079	somatic	0	0.00409032357860898	0.00262380725509603
2	109196472	109202688	6	gain	AAABBB	10.3096	germline	1	0.0143140075464228	0.0366540735430546
2	120313788	120394596	2	neutral	AA	74.28	somatic	0	9.70532983549177e-07	3.30902040035497e-05
2	122178588	122191020	2	neutral	AA	88.1974	somatic	0	0.00273081673968041	0.0054191257195485
2	122191020	122194128	3	gain	-	-1	somatic	0	0.0888073337100583	0.279536372319929
2	128208108	128248512	2	neutral	AA	13.2845	somatic	0	1.24248860554724e-05	6.83963994601022e-05
2	134815716	134964900	2	neutral	AA	100	somatic	0	5.05223118388136e-05	0.000167640137350711
2	136307556	136400796	2	neutral	AA	36.3787	somatic	0	0.0234095306196933	0.0806853534133135
2	142846788	142940028	2	neutral	AA	36.3786	somatic	0	0.444610782148077	0.27482481860823
2	146747328	146797056	2	neutral	AA	24.2893	somatic	0	0.00113006691763099	0.00911534784209678
2	151704588	151931472	2	neutral	AA	13.8158	somatic	0	0.854267626269804	0.227524835974617
2	156002952	156012276	2	neutral	AA	54.5678	somatic	0	0.218578061419919	0.676560966601146
2	173187084	173227488	2	neutral	AA	100	somatic	0	0.804166615962145	0.374688252210612
2	218392944	218473752	2	neutral	AA	100	somatic	0	1.52917341763185e-10	2.85507650854555e-09
2	220198692	220208016	2	neutral	AA	100	somatic	0	0.229618623853856	0.284685228304378
2	230964804	231651672	2	neutral	AA	3.22485	somatic	0	7.66262040102594e-33	0
2	238047936	238125636	2	neutral	AA	16.6432	somatic	0	0.0015638479213561	0.000756832378773775
3	0	27972	3	gain	AAB	-1	somatic	0	NA	NA
3	27972	130536	3	gain	AAB	1.66496	somatic	0	1.16817440742457e-16	0
3	3869460	3978240	2	neutral	AA	36.386	somatic	0	0.361060995623309	0.0930616633303643
3	31928484	32090100	2	neutral	AA	100	somatic	0	7.23261528145283e-08	3.24686062369572e-07
3	41889624	41967324	2	neutral	AA	26.6512	somatic	0	1.13108261672527e-11	6.4529492860288e-12
3	41967324	41989080	1	loss	A	-1	somatic	0	0.000105315753015806	6.7533334234704e-05
3	43919148	44037252	2	neutral	AA	43.307	somatic	0	0.0381992442091207	0.087876554696571
3	59950212	59956428	2	neutral	AA	54.5678	somatic	0	0.0510106751715243	0.113183011421669
3	69174756	69212052	2	neutral	AA	56.4386	somatic	0	5.32713100629121e-05	3.12834053380895e-05
3	69212052	69221376	1	loss	A	-1	somatic	0	0.0190772934306512	0.0883709611917297
3	75723312	75779256	2	neutral	AA	0.453175	somatic	0	0.0748251257441002	0.230615407202626
3	83362776	83409396	2	neutral	AA	40.0026	somatic	0	0.00184577855432474	0.0149764754044066
3	90302940	90414828	2	neutral	AA	3.48641	somatic	0	2.19239816447347e-11	1.09807718473576e-11
3	90414828	90424152	1	loss	A	-1	somatic	0	0.0219354502016563	0.0534094877507656
3	105929964	105945504	2	neutral	AA	100	somatic	0	0.277099796679065	0.185655525499581
3	138551532	138899628	2	neutral	AA	62.9442	somatic	0	4.05157719246246e-52	0
3	140661864	140720916	2	neutral	AA	46.093	somatic	0	0.23421180173545	0.261334948355444
3	145808712	146004516	2	neutral	AA	60.9447	somatic	0	4.78081866878983e-05	0.000279642217604903
3	160102404	161696808	2	neutral	AA	20.7833	somatic	0	0.503549506987541	0.0137043515352543
3	162402324	162588804	2	neutral	AA	24.3305	somatic	0	0.00974559553234073	0.0100859289613
3	162797040	162908928	1	loss	A	-1	somatic	0	2.77614540714887e-21	0
3	164801700	165267900	2	neutral	AA	13.9863	somatic	0	1.13589214910723e-13	9.21029918998784e-12
3	183114036	183154440	2	neutral	AA	54.5678	somatic	0	0.00071117856537563	0.00239170554710633
4	5445216	5516700	2	neutral	AA	100	somatic	0	0.0405932056576109	0.0291406756389788
4	6405588	6514368	2	neutral	AA	10.7167	germline	1	4.80988834429277e-08	5.91269271876804e-07
4	6548556	6613824	2	neutral	AA	53.0749	germline	1	0.195257750991814	0.111298972227866
4	6613824	6626256	3	gain	AAB	10.9898	germline	1	0.00055870414218059	0.000744618098206695
4	8773884	10076136	2	neutral	AA	6.11017	somatic	0	8.39397503349213e-16	1.13979492510907e-10
4	10076136	10365180	2	neutral	AA	18.6897	somatic	0	9.16570224722711e-45	0
4	10365180	12217548	2	neutral	AA	6.78296	germline	1	9.3609798835794e-19	0
4	17609928	17656548	2	neutral	AA	83.3001	somatic	0	6.27966588029215e-05	0.000208303660867659
4	31076892	31145268	2	neutral	AA	26.4833	somatic	0	0.0377640213552696	0.0285604354739373
4	31592820	31670520	2	neutral	AA	89.7197	somatic	0	0.00469020573099253	0.00500702974311273
4	37839900	37858548	2	neutral	AA	100	somatic	0	0.0630854305309063	0.218742747683996
4	44963436	45003840	4	gain	AAAB	1.16171	germline	1	9.23842747056718e-09	5.59349011552968e-10
4	63269556	63288204	1	loss	A	-1	germline	1	2.28439661501628e-05	1.28715118583589e-05
4	63828996	63850752	1	loss	A	-1	germline	1	2.26049148610056e-05	1.25622658980751e-05
4	68518968	68528292	1	loss	A	-1	germline	1	0.00272123217698959	0.00498788391677374
4	68534508	68621532	1	loss	A	-1	germline	1	2.21834158532291e-13	5.55111512312578e-16
4	74163096	74222148	2	neutral	AA	100	somatic	0	0.0659076616443257	0.184298623984173
4	105519708	105584976	2	neutral	AA	29.7858	somatic	0	0.285352356145983	0.0241643239316577
4	107126544	108099348	2	neutral	AA	16.9043	somatic	0	2.37014078087408e-15	4.39870362356487e-12
4	124136628	125463744	2	neutral	AA	27.7136	somatic	0	4.28260437401149e-37	0
4	132046488	132071352	2	neutral	AA	27.3289	somatic	0	0.0592065036266281	0.138652925859789
4	140347956	140425656	2	neutral	AA	27.2862	somatic	0	0.757385851030076	0.685623025514507
4	147636216	147713916	2	neutral	AA	27.0289	somatic	0	4.70966835907426e-11	5.33997290830257e-11
4	165420192	165432624	2	neutral	AA	100	somatic	0	0.267573198364614	0.118502459729339
4	175353360	175424844	2	neutral	AA	100	somatic	0	0.135353166462006	0.190874870317907
4	175424844	175427952	3	gain	-	-1	somatic	0	0.085775960312678	0.27437223885605
5	27972	49728	3	gain	AAA	20.5375	somatic	0	2.51689394813135e-05	1.96117375281801e-05
5	49728	77700	3	gain	-	-1	somatic	0	3.22475945333104e-05	2.20695809263205e-05
5	4149180	4161612	2	neutral	AA	54.5678	somatic	0	0.543754551692778	0.664257839279019
5	8469300	8475516	2	neutral	AA	100	somatic	0	0.488401349857591	0.745676317894851
5	10449096	10467744	2	neutral	AA	38.4598	somatic	0	0.74358199698233	0.655151270916078
5	13109544	13146840	2	neutral	AA	54.5678	somatic	0	0.117803093344639	0.170239665466948
5	18023292	18032616	2	neutral	AA	54.5678	somatic	0	0.750401350420082	0.468308968548944
5	19592832	20320104	2	neutral	AA	100	somatic	0	7.02856355141849e-06	3.97006737484773e-08
5	21025620	21053592	2	neutral	AA	100	somatic	0	0.680747687881207	0.343583238436616
5	26912172	27151488	2	neutral	AA	20.5088	somatic	0	0.000276146093841223	0.0012727435090516
5	31465392	31480932	2	neutral	AA	100	somatic	0	0.985524811118094	0.975629957132934
5	31480932	31574172	2	neutral	AA	27.3781	somatic	0	8.26357148875047e-07	3.59566679841716e-06
5	40006176	40118064	2	neutral	AA	36.9913	somatic	0	0.0427911211278195	0.157938153030593
5	44776956	44845332	2	neutral	AA	18.1898	somatic	0	0.00151684706404084	0.0302817756112054
5	46306092	46433520	2	neutral	AA	5.27822	somatic	0	1.75102556197535e-18	0
5	46433520	49656516	2	neutral	AA	-1	somatic	0	NA	NA
5	49656516	49659624	176	gain	-	-1	germline	1	0.08326528533776	0.27003809531891
5	49659624	50150688	2	neutral	AA	-1	somatic	0	NA	NA
5	50150688	50647968	2	neutral	AA	5.10912	germline	1	2.96823940039588e-15	1.01774144667388e-12
5	63480900	63530628	2	neutral	AA	36.3787	somatic	0	0.107554054446678	0.126827205806393
5	65833656	65961084	2	neutral	AA	32.0328	somatic	0	1.33361628504084e-10	2.123593856318e-09
5	66989832	66999156	2	neutral	AA	54.5678	somatic	0	0.0735878051276597	0.133151538924129
5	68963412	68982060	2	neutral	AA	73.1517	somatic	0	0.0127793887515862	0.00745254488699687
5	88090044	88198824	2	neutral	AA	68.7754	somatic	0	0.00149298427860721	0.00552731395160944
5	99785448	99875580	2	neutral	AA	13.9671	somatic	0	0.0272974144877949	0.0206386934334972
5	104596632	104612172	2	neutral	AA	10.9136	somatic	0	0.0377300636598313	0.0895853623176371
5	105718620	105721728	3	gain	-	-1	somatic	0	0.0895765756909411	0.280832469715935
5	105721728	105737268	2	neutral	AA	100	somatic	0	0.138508149566593	0.240428814352054
5	113566320	113600508	2	neutral	AA	54.5678	somatic	0	0.654491372568778	0.710129347299847
5	120030960	120046500	2	neutral	AA	100	somatic	0	0.324203774788537	0.438202025073788
5	121190244	121202676	2	neutral	AA	54.568	somatic	0	0.324001260330492	0.610095314931421
5	127390704	127511916	2	neutral	AA	87.5021	somatic	0	0.000485135302526344	0.000110508160783507
5	129976560	130072908	2	neutral	AA	27.2839	somatic	0	0.0150444581251915	0.0181016112445231
5	134678964	134781528	1	loss	A	-1	somatic	0	3.53530090429159e-20	0
5	136537548	136590384	2	neutral	AA	36.3786	somatic	0	0.516226437905426	0.536181803204914
5	140341740	140375928	2	neutral	AA	100	somatic	0	0.00864076603183719	0.00945188218528725
5	142343292	142358832	2	neutral	AA	100	somatic	0	0.0161927650516134	0.0323126048137573
5	146806380	147042588	2	neutral	AA	22.8547	somatic	0	0.0860296033548931	0.00460625898789357
5	149522772	149656416	2	neutral	AA	16.9706	somatic	0	4.47269999760202e-11	7.15945747131741e-10
5	152089980	152096196	2	neutral	AA	54.5678	somatic	0	0.841104511931454	0.666962036942832
5	153522768	153535200	2	neutral	AA	100	somatic	0	0.108663759142026	0.145341140165249
5	164472252	164503332	2	neutral	AA	54.568	somatic	0	0.0235832314215618	0.045158323046363
5	174722436	174787704	2	neutral	AA	16.8999	somatic	0	1.40794276223666e-09	1.45501858339614e-08
5	175741860	175754292	2	neutral	AA	54.5679	somatic	0	0.182980324267451	0.15311793874227
5	176624532	176661828	2	neutral	AA	34.2294	somatic	0	0.101986315052364	0.106500982648031
5	178498656	178588788	2	neutral	AA	3.17416	germline	1	0.432236635517459	0.358762960861787
6	295260	382284	3	gain	AAB	0.593637	germline	1	1.04673963405591e-18	0
6	21246288	21277368	2	neutral	AA	36.3872	somatic	0	0.332050934139927	0.137916738077502
6	32491032	32528328	0	loss	-	-1	germline	1	2.03863667289518e-07	3.05249580057065e-08
6	41218296	41255592	2	neutral	AA	13.5456	somatic	0	0.23854162728611	0.564140495774387
6	103288164	103291272	1	loss	A	29.6246	germline	1	0.111087751603009	0.31543508131815
6	103291272	103316136	1	loss	A	-1	germline	1	1.03442678327352e-06	2.52058890537477e-07
6	129305232	129389148	2	neutral	AA	36.3157	somatic	0	0.000742060408895873	0.0031727545129443
6	131937708	132074460	2	neutral	AA	100	somatic	0	0.00643065441470649	0.0259214437964344
6	133644000	133671972	2	neutral	AA	27.5354	somatic	0	0.10982208164615	0.0735860247610122
6	136198776	136643220	2	neutral	AA	12.3988	somatic	0	1.341322904834e-08	4.43299730257252e-10
6	157308312	157311420	9	gain	AAAAAABBB	5.05922	germline	1	0.0832675918094647	0.270042101253819
6	159617556	159766740	2	neutral	AA	23.7178	somatic	0	5.54346018473758e-12	2.48712161976528e-12
6	163480800	163502556	2	neutral	AA	100	somatic	0	0.374946495419635	0.366746109161728
6	167260128	167278776	2	neutral	AA	21.8313	germline	1	0.120440814169747	0.269847364916859
6	170054220	170178540	2	neutral	AA	2.06818	germline	1	0.000157653939392294	0.000183763163057682
7	62296752	62455260	2	neutral	AA	1.76209	somatic	0	9.1698329681994e-09	4.72719731137161e-06
7	75030228	75064416	2	neutral	AA	54.5678	somatic	0	3.00218184110306e-05	0.000241991418439724
7	75791688	75797904	1	loss	A	-1	somatic	0	0.0150044224594741	0.0383220043742285
7	78632400	78638616	2	neutral	AA	54.5678	somatic	0	0.196840813557445	0.439841938289694
7	91673568	91682892	2	neutral	AA	100	somatic	0	0.460159518382114	0.329964642571272
7	97041084	97507284	2	neutral	AA	16.8611	somatic	0	1.93033429885132e-06	8.33716429227138e-10
7	100957164	100960272	12	gain	AAAAAAAABBBB	5.88632	germline	1	0.0832668229798127	0.270040765937363
7	100960272	100969596	3	gain	AAB	0.73049	germline	1	0.00273071860300791	0.00505058879543463
7	104553120	104680548	2	neutral	AA	41.2899	somatic	0	0.565684750801287	0.0204441215676368
7	111185592	111191808	2	neutral	AA	100	somatic	0	0.169717192836996	0.194030396960073
7	124696068	124714716	2	neutral	AA	100	somatic	0	0.0509427578189559	0.103194119517981
7	126066696	126091560	2	neutral	AA	54.5678	somatic	0	0.154806174609514	0.118950098685018
7	132518904	132587280	2	neutral	AA	21.5716	somatic	0	0.000182730810844711	0.000733951216386308
7	132587280	134601264	2	neutral	AA	23.3156	somatic	0	0.111787078213987	2.90017705406598e-08
7	145249272	145292784	2	neutral	AA	100	somatic	0	0.848505543982591	0.358839489995701
7	152195652	152400780	2	neutral	AA	21.1098	somatic	0	1.04383981732036e-12	1.97619698383278e-13
7	152400780	152406996	8	gain	AAAAAAAB	100	germline	1	0.0143080619435537	0.0366361673547454
7	152406996	152416320	2	neutral	AA	-1	germline	1	NA	NA
7	152416320	152469156	2	neutral	AA	17.0758	germline	1	1.61451304234423e-06	3.7049149170798e-07
7	152469156	152484696	1	loss	A	-1	somatic	0	0.000191240102800321	0.000156749536942336
7	157979640	158253144	2	neutral	AA	4.27049	germline	1	4.64975719509178e-09	5.97318072781405e-08
7	158595024	158598132	5	gain	AAABB	8.83435	germline	1	0.0832791249443263	0.270062131579055
7	159281892	159328512	3	gain	AAB	75.466	somatic	0	2.10107781951708e-07	3.26776072867574e-08
7	159328512	159331620	3	gain	-	-1	somatic	0	0.0833091171509771	0.270114215500162
8	354312	382284	2	neutral	AA	15.5931	somatic	0	0.101336993697748	0.155896149432388
8	6539232	6632472	2	neutral	AA	34.4029	somatic	0	0.362166259352652	0.103533663685333
8	29047368	29224524	2	neutral	AA	31.7333	somatic	0	0.00386502982645093	0.000523846117787885
8	39375252	39527544	1	loss	A	-1	germline	1	4.03668574764326e-31	0
8	39975096	40024824	2	neutral	AA	27.6632	somatic	0	1.78948375826826e-06	3.53994348289977e-06
8	43235388	43241604	4	gain	AAAA	2.34616	germline	1	0.014322505045382	0.0366723530564391
8	49839888	49861644	2	neutral	AA	75.4991	somatic	0	0.00833247197493374	0.0250329289963848
8	51626988	51686040	2	neutral	AA	100	somatic	0	0.572574903301819	0.668742529727281
8	66330936	66377556	2	neutral	AA	46.5981	somatic	0	0.224237182410635	0.104018440972036
8	94097808	94107132	2	neutral	AA	54.5678	somatic	0	0.531142778287134	0.755877484065409
8	113299032	113336328	2	neutral	AA	32.8682	somatic	0	0.175435488002453	0.0276268658380505
8	130943148	131135844	2	neutral	AA	33.192	somatic	0	2.66984899566895e-14	2.55351295663786e-15
8	136668084	136851456	1	loss	A	-1	germline	1	7.22361629008373e-39	0
8	144124176	144127284	5	gain	AAAAB	37.655	germline	1	0.0832791249443263	0.270062131579055
8	145000632	145069008	3	gain	AAB	2.66948	somatic	0	2.63673709577385e-11	2.44421149986351e-11
8	145069008	145138636	3	gain	AAB	-1	somatic	0	NA	NA
9	33808824	34358940	1	loss	A	-1	somatic	0	9.56312562580825e-85	0
9	40870200	40913712	4	gain	-	-1	somatic	0	0.000532704130231778	0.000671862614133212
9	40913712	40929252	6	gain	-	-1	germline	1	0.00270084594394144	0.00495880224578749
9	68795580	68867064	2	neutral	AA	30.4247	somatic	0	0.0325159682055218	0.0195565778769855
9	69277320	69311508	2	neutral	AA	19.6707	somatic	0	0.00142055308833247	0.00384732805733967
9	87434256	87477768	2	neutral	AA	100	somatic	0	0.000169194093780521	0.000373471050948093
9	93743496	93793224	2	neutral	AA	100	somatic	0	0.223095578723545	0.185001055515175
9	94526712	94588872	2	neutral	AA	27.2843	somatic	0	0.000224497236364814	0.00183693315260203
9	95260200	95285064	2	neutral	AA	54.568	somatic	0	0.488404413472194	0.455202087915291
9	100885680	100938516	2	neutral	AA	36.7139	somatic	0	0.0406996926671555	0.0132228971883264
9	103614504	103673556	2	neutral	AA	100	somatic	0	0.0586801606691787	0.0511786953137329
9	104307588	104351100	2	neutral	AA	34.1823	somatic	0	0.839987422616185	0.415571262687632
9	105373632	105379848	2	neutral	AA	54.5678	somatic	0	0.178334819321453	0.213311282154751
9	110961816	110977356	2	neutral	AA	100	somatic	0	0.477939574119391	0.215242734286139
9	116164608	116183256	2	neutral	AA	100	somatic	0	0.000950997178075871	0.00937708163305917
9	118635468	118638576	2	neutral	AA	100	somatic	0	0.199382341531719	0.434818058188809
9	120413244	120422568	2	neutral	AA	36.3786	somatic	0	0.18949386243262	0.354510372427688
9	122949372	122964912	2	neutral	AA	54.5728	somatic	0	0.00237967844808629	0.00196680786101222
9	124195680	124201896	2	neutral	AA	54.5678	somatic	0	0.547683481713837	0.465751352542096
9	127772988	127832040	2	neutral	AA	54.5705	somatic	0	0.000101048768025827	5.95454939577023e-05
9	128717820	128904300	2	neutral	AA	17.8285	somatic	0	8.1669718643866e-23	0
9	129423336	129457524	2	neutral	AA	0.236706	somatic	0	0.74068499796965	0.623358027372844
9	130952472	130961796	2	neutral	AA	9.06985	somatic	0	0.276801898862685	0.711555715511018
9	133929936	133954800	2	neutral	AA	11.2193	somatic	0	0.00726523060501607	0.0245509059122475
9	135011520	135020844	2	neutral	AA	36.3786	somatic	0	0.0745042307447713	0.0705844890042707
9	137184012	137215092	2	neutral	AA	36.3786	somatic	0	0.00383653846197503	0.0139468212599801
10	38526768	38529876	23	gain	-	-1	germline	1	0.0832668229798127	0.270040765937363
10	41858544	41898948	24	gain	AAAAAAAAAAAAAAAABBBBBBBB	2.658	germline	1	0.000107526517442096	9.08100473021589e-05
10	46514328	46560948	4	gain	AAAB	0.813342	germline	1	9.15615373526808e-11	1.38666855775682e-12
10	46992960	47005392	2	neutral	AA	100	somatic	0	0.139660465478988	0.326358985993895
10	48972756	48994512	2	neutral	AA	100	somatic	0	0.00470236999101339	0.00221593755609084
10	50971200	51002280	2	neutral	AA	100	somatic	0	0.330206529263186	0.736895930177577
10	56649516	56693028	2	neutral	AA	27.2878	somatic	0	0.392562905607687	0.395224772837648
10	57414084	57423408	2	neutral	AA	100	somatic	0	0.266353136824958	0.24332578024672
10	63828996	63838320	2	neutral	AA	100	somatic	0	0.118102218822816	0.105594453873736
10	64083852	64086960	3	gain	-	-1	somatic	0	0.0885088849301404	0.279028716403891
10	75539940	75558588	2	neutral	AA	36.3787	somatic	0	0.889783800053661	0.984098825264221
10	86293620	86377536	2	neutral	AA	33.8154	somatic	0	0.000143007066118605	0.00603998968602093
10	86377536	86545368	2	neutral	AA	100	somatic	0	2.15605935575003e-21	0
10	88671240	88867044	2	neutral	AA	21.5003	somatic	0	0.012101697696199	0.000557551519021593
10	90023220	90206592	2	neutral	AA	27.4045	somatic	0	1.51894678997406e-05	0.00015340821176224
10	94371312	95244660	2	neutral	AA	8.78825	somatic	0	2.90392704690186e-23	0
10	106138200	106197252	2	neutral	AA	36.3978	somatic	0	0.0571104717194968	0.083195707293288
10	111378288	111511932	2	neutral	AA	31.1408	somatic	0	2.41850409976951e-09	5.57261004008325e-09
10	113100120	113146740	2	neutral	AA	19.8735	somatic	0	0.0454063087144456	0.0607253145775747
10	113861580	114057384	2	neutral	AA	24.1358	somatic	0	0.925798606096518	0.265509916289044
10	122560872	122588844	2	neutral	AA	36.3787	somatic	0	0.00665830853130735	0.0097855538248347
10	125762112	125942376	2	neutral	AA	10.3895	somatic	0	0.976695954060086	0.844438682349889
10	126738024	126902748	2	neutral	AA	33.5764	somatic	0	0.66974639396381	0.384442575590351
10	127673532	127720152	2	neutral	AA	100	germline	1	0.282717208372763	0.483842699416755
10	128462964	128466072	9	gain	AAAAABBBB	15.9225	germline	1	0.0832675918094647	0.270042101253819
10	133616028	133622244	3	gain	-	-1	somatic	0	0.0159752456045279	0.0412602198001423
11	9149952	9731148	1	loss	A	-1	somatic	0	2.08768950055483e-90	0
11	59788596	59937780	2	neutral	AA	18.3073	somatic	0	0.00503002790391363	0.00303098463006912
11	66088512	66100944	2	neutral	AA	100	somatic	0	0.0324966676843952	0.0779914343320504
11	68369784	68428836	2	neutral	AA	30.3689	somatic	0	0.229820263504652	0.514410881959577
11	74582676	74616864	2	neutral	AA	100	somatic	0	2.38846985950722e-05	0.000126149062794845
11	74616864	74623080	2	neutral	AA	54.6335	somatic	0	0.561225618490978	0.504762597202182
11	84994476	85028664	2	neutral	AA	54.5685	somatic	0	0.0774136998447283	0.0724815980352432
11	91235340	91297500	2	neutral	AA	21.9588	somatic	0	0.0294066893845272	0.0934728014315532
11	95384520	95400060	2	neutral	AA	54.5681	somatic	0	0.609132010454474	0.917851759106732
11	97693764	97715520	2	neutral	AA	100	somatic	0	0.638200858454376	0.445947891613346
11	98191044	98253204	2	neutral	AA	100	somatic	0	0.569222023658017	0.145387106286622
11	103101684	103145196	2	neutral	AA	36.3786	somatic	0	0.536761712450075	0.61463056226124
11	106172388	106274952	2	neutral	AA	46.1904	germline	1	1.56701960540199e-07	1.54137617387473e-05
11	109333224	109699968	2	neutral	AA	100	somatic	0	0.00108422784375053	0.00012887356667779
11	111611388	111633144	2	neutral	AA	100	somatic	0	0.000385396193059868	0.000896606275168632
11	128720928	128752008	2	neutral	AA	30.7552	somatic	0	9.64172116479852e-05	0.00146387763024425
11	133445088	133519680	2	neutral	AA	51.7236	somatic	0	0.000352314619912411	0.000794306104884179
11	134971116	135070572	3	gain	AAB	19.3564	somatic	0	6.80785842454793e-18	0
11	135070572	135073680	4	gain	-	-1	somatic	0	0.0832883523838677	0.270078156620084
11	135073680	135086622	3	gain	AAB	-1	somatic	0	NA	NA
12	1414140	1476300	2	neutral	AA	42.5844	somatic	0	0.000482171169150494	8.53842162864549e-05
12	2253300	2256408	6	gain	AAAABB	10.8298	germline	1	0.0832791249443263	0.270062131579055
12	2520588	2582748	2	neutral	AA	9.21508	somatic	0	3.77226984413053e-07	6.36404674614344e-06
12	5914524	5923848	2	neutral	AA	18.0503	somatic	0	0.313588190707913	0.349257984224541
12	7614600	8034180	1	loss	A	-1	somatic	0	7.9795392173807e-65	0
12	8637132	8842260	2	neutral	AA	89.1803	somatic	0	1.80065108571196e-22	0
12	19070688	19238520	2	neutral	AA	61.1948	somatic	0	0.0490451474773402	0.00917872985284285
12	20581176	20593608	2	neutral	AA	100	somatic	0	0.0755056219493542	0.232229137703958
12	21616140	21644112	2	neutral	AA	54.5873	somatic	0	0.425748602721676	0.566267716049178
12	27412560	27449856	2	neutral	AA	54.5679	somatic	0	0.0288347582910792	0.0202549273865368
12	37827468	37833684	4	gain	AAAB	17.5061	germline	1	0.0143121872324889	0.0366423788385648
12	50116500	50163120	2	neutral	AA	46.2874	somatic	0	2.2827976109586e-09	9.92259630017145e-09
12	91956396	91999908	2	neutral	AA	21.8271	somatic	0	0.0299633883455596	0.0269568658582926
12	97504176	97628496	2	neutral	AA	13.2868	somatic	0	3.19663609133611e-07	4.85445736732038e-05
12	122209668	122657220	1	loss	A	25.4078	somatic	0	4.09212668235691e-70	0
12	127281924	127309896	2	neutral	AA	25.7505	somatic	0	0.00425809484225549	0.0163451152942874
12	129460632	129616032	2	neutral	AA	24.1743	somatic	0	0.000264910777474369	0.00319902761241053
13	19710936	20034168	1	loss	A	-1	somatic	0	6.70130092482351e-54	0
13	22020180	22023288	0	loss	-	-1	germline	1	0.0832706671855787	0.270047442567831
13	63033348	63064428	3	gain	-	-1	germline	1	2.3338571656761e-07	1.90486827311709e-07
13	63064428	63067536	5	gain	-	-1	germline	1	0.0832798938659904	0.270063466972631
13	89299056	89308380	2	neutral	AA	54.5678	somatic	0	0.347043865769213	0.497450842158728
13	91950180	92074500	2	neutral	AA	74.9285	somatic	0	0.240656857830138	0.105358778897632
13	94738056	94756704	2	neutral	AA	35.0748	somatic	0	0.236861920676985	0.038623328581799
13	95297496	95365872	1	loss	A	-1	somatic	0	1.02982799050707e-12	2.76445533131664e-14
13	100680552	100720956	2	neutral	AA	100	somatic	0	0.501904239486526	0.504763374560218
13	106884120	106915200	2	neutral	AA	31.7605	somatic	0	0.789117945555487	0.808410570641075
13	108416364	108438120	2	neutral	AA	22.3838	somatic	0	0.072522808412026	0.353381884884291
13	111505716	111511932	2	neutral	AA	54.5678	somatic	0	0.0230718172497949	0.0532702504653353
13	114321564	114330888	3	gain	AAB	50.6046	somatic	0	0.00281663885838675	0.00525455006332698
13	114330888	114343320	3	gain	-	-1	somatic	0	0.00270757409605576	0.0049719477856186
14	0	18682188	4	gain	AABB	-1	somatic	0	0.089184175609037	0.280172222446258
14	18694620	19726476	4	gain	AABB	-1	germline	1	NA	NA
14	19726476	19909848	4	gain	AABB	0.498402	germline	1	1.03815164252422e-18	0
14	19916064	19956468	4	gain	AABB	11.0853	germline	1	4.33043994275501e-08	4.12991962850384e-09
14	19956468	20077680	2	neutral	AA	28.534	somatic	0	0.923946841969933	0.176065694557537
14	20646444	20652660	2	neutral	AA	36.3786	somatic	0	0.077703252346824	0.185275706619973
14	25563300	25597488	2	neutral	AA	100	somatic	0	0.166237782493557	0.141408615105402
14	28139832	28655760	2	neutral	AA	27.3006	somatic	0	0.000228155134819963	0.000426986275057439
14	30275028	30324756	2	neutral	AA	54.5707	somatic	0	0.0325214999076916	0.0760210698679212
14	36867096	36885744	2	neutral	AA	41.8281	somatic	0	0.036640296540725	0.0619010634153437
14	51157680	51167004	2	neutral	AA	54.5678	germline	1	0.17410665572894	0.144942628185893
14	54825120	54902820	2	neutral	AA	100	somatic	0	8.30589235049819e-07	1.14372031767562e-06
14	57858528	57880284	2	neutral	AA	28.0569	somatic	0	0.033557420822083	0.0280848342555278
14	63409416	63474684	2	neutral	AA	100	somatic	0	0.00032668308187104	5.12653223250226e-05
14	63474684	63897372	1	loss	A	21.536	somatic	0	7.80606703373145e-69	0
14	63897372	63922236	2	neutral	AA	60.3159	somatic	0	0.000272188318118972	0.000539129372094771
14	66762948	66980508	2	neutral	AA	15.6237	somatic	0	0.00499761344947053	0.00133941156856321
14	72860844	72901248	2	neutral	AA	20.582	germline	1	0.0150902724446482	0.0769867534705175
14	72901248	73522848	2	neutral	AA	84.1436	somatic	0	1.50484253813398e-84	0
14	73522848	73525956	1	loss	A	-1	somatic	0	0.10291794139312	0.302653578260558
14	84829752	84835968	0	loss	-	-1	germline	1	0.0143161921927205	0.0366588254494752
14	84835968	84938532	2	neutral	AA	100	somatic	0	0.000152087392137006	0.000358263408142379
14	99925308	99928416	6	gain	AAAABB	95.4996	germline	1	0.0832791249443263	0.270062131579055
14	106865472	106877904	4	gain	AABB	4.43527	somatic	0	0.000532802476762979	0.000671594672248421
14	106877904	106881012	4	gain	-	-1	somatic	0	0.0832906593731556	0.270082162988792
15	0	20338752	5	gain	-	-1	somatic	0	0.481127770077343	0.581917636779536
15	20338752	20341860	15	gain	-	-1	germline	1	0.0832668229798127	0.270040765937363
15	20341860	20671308	5	gain	-	-1	germline	1	1.97573260513097e-11	1.87627691161651e-13
15	22225308	22271928	3	gain	AAB	16.8238	somatic	0	2.65547831012015e-05	2.22019746565216e-05
15	40354272	40481700	2	neutral	AA	14.9068	somatic	0	0.0387160728318777	0.0115329510747275
15	40780068	40792500	2	neutral	AA	54.5679	somatic	0	0.0107772519465975	0.0100835730416365
15	43412544	43878744	2	neutral	AA	18.1893	somatic	0	6.73821096119913e-33	0
15	75474672	75636288	1	loss	A	-1	somatic	0	2.30318830292454e-28	0
16	1022532	1025640	4	gain	AABB	100	germline	1	0.0832837385605765	0.270070144012809
16	12320112	12407136	2	neutral	AA	26.3289	somatic	0	0.445682406833091	0.488695306966451
16	18965016	19095552	2	neutral	AA	23.4365	somatic	0	2.11394078242693e-19	0
16	22613808	22697724	3	gain	AAB	1.57812	germline	1	3.62855278477951e-17	0
16	25681404	25687620	2	neutral	AA	100	somatic	0	0.0683910224787656	0.113379107553635
16	34082328	34085436	8	gain	AAAABBBB	56.3715	germline	1	0.0832691294860205	0.270044771901191
16	34085436	34094760	2	neutral	AA	5.58208	germline	1	0.181338629244579	0.148003349729937
16	34094760	34100976	5	gain	AAABB	1.6365	germline	1	0.0143104884570558	0.0366387249129729
16	34762980	34958784	2	neutral	AA	0.736552	somatic	0	0.0425254767017491	0.240318284289795
16	35984424	35987532	1	loss	A	-1	somatic	0	0.100543533347505	0.298859617922893
16	35987532	36090096	2	neutral	AA	8.37449	germline	1	5.43753657952632e-12	4.41666703210331e-11
16	36121176	36127392	4	gain	-	-1	germline	1	0.0143246908356468	0.0366778384654902
16	46828236	46831344	1	loss	A	-1	somatic	0	0.110192068142995	0.314056199759616
16	49395444	49407876	2	neutral	AA	36.3786	somatic	0	0.0283357936889292	0.0771162998816451
16	55984404	55990620	2	neutral	AA	54.5678	somatic	0	0.353397252163724	0.692682113467296
16	58700796	58713228	2	neutral	AA	100	somatic	0	0.019228496342398	0.0322589581814522
16	61218276	61243140	2	neutral	AA	54.5679	somatic	0	0.104912490090933	0.306814768475826
16	62937000	62946324	2	neutral	AA	100	somatic	0	0.904749149510126	0.981859028590313
16	70150668	70163100	3	gain	AAB	8.41747	germline	1	0.00053306339081109	0.000672251307880845
16	79334808	79384536	2	neutral	AA	36.3786	somatic	0	0.0375876511416791	0.0461304565829793
16	88972716	89047308	2	neutral	AA	47.3564	somatic	0	0.803001932132248	0.583601114666688
16	89734176	89821200	2	neutral	AA	47.8556	somatic	0	2.62072139717587e-08	7.86628474580553e-07
17	2377620	2477076	2	neutral	AA	84.2791	somatic	0	2.02119338142269e-10	2.2669548127574e-08
17	12767664	12817392	2	neutral	AA	27.3333	somatic	0	0.078804615947155	0.0170472095809365
17	15953364	16385376	2	neutral	AA	55.7033	somatic	0	4.06285748778807e-52	0
17	17233860	17348856	2	neutral	AA	100	somatic	0	5.35228267937583e-21	0
17	21289800	21302232	4	gain	AABB	0.223436	germline	1	0.000532498939781802	0.000671447346915488
17	21967344	21979776	10	gain	-	-1	germline	1	0.0143066062096732	0.0366321486502663
17	21979776	22156932	6	gain	AAAABB	0.187435	germline	1	4.24598636904334e-10	1.02357011755316e-11
17	22156932	22160040	4	gain	AABB	1.58282	germline	1	0.0832852764786687	0.270072814862621
17	26937036	26940144	15	gain	AAAAAAAAAABBBBB	23.3059	germline	1	0.0832668229798127	0.270040765937363
17	27303780	27465396	2	neutral	AA	23.4084	somatic	0	6.07575363627944e-09	2.53012294448851e-08
17	39269580	39533760	1	loss	A	-1	somatic	0	3.97733140472455e-50	0
17	40118064	40298328	2	neutral	AA	100	somatic	0	9.04744789195979e-31	0
17	42573384	42713244	2	neutral	AA	23.9093	somatic	0	1.14151089327128e-16	3.77475828372553e-15
17	42713244	42728784	1	loss	A	-1	somatic	0	0.000340952529212735	0.000453580571034173
17	51375240	51421860	2	neutral	AA	27.2839	somatic	0	0.110839957863337	0.0740649757621824
17	58004604	58048116	2	neutral	AA	36.0808	somatic	0	0.000762903139218166	0.00124649823979295
17	64407084	64410192	1	loss	A	-1	somatic	0	0.103467307564208	0.303528195818001
17	64475460	64484784	1	loss	A	-1	somatic	0	0.00569489422219514	0.00976832216671575
17	83194944	83204268	3	gain	-	-1	somatic	0	0.00304192249573125	0.00601874617269715
18	1846152	1852368	2	neutral	AA	54.5678	somatic	0	0.0982463690322782	0.198865046095615
18	8823612	8907528	2	neutral	AA	22.5413	somatic	0	0.04160553267929	0.135396808138818
18	9849252	9889656	2	neutral	AA	24.6013	somatic	0	0.174555685237906	0.238289974389127
18	11735808	11763780	2	neutral	AA	34.98	somatic	0	0.717153796144587	0.712839496379178
18	13205892	13233864	2	neutral	AA	36.3786	somatic	0	0.284313307297154	0.552902483528308
18	13283592	13286700	3	gain	-	-1	somatic	0	0.092004413029587	0.284900782427618
18	13777764	13787088	2	neutral	AA	100	somatic	0	0.419674847282683	0.718405107388229
18	22206660	22262604	2	neutral	AA	100	somatic	0	5.43805234880216e-05	7.2200573405512e-06
18	22262604	22337196	2	neutral	AA	90.6428	somatic	0	0.421874924532101	0.119140109589155
18	22337196	22340304	3	gain	-	-1	somatic	0	0.0897626760554222	0.281145826766088
18	22850016	23067576	2	neutral	AA	100	somatic	0	2.4745085592989e-16	1.21647136808178e-12
18	23067576	23089332	1	loss	A	-1	somatic	0	1.20411723290766e-05	5.30963014577779e-06
18	29379924	29386140	2	neutral	AA	54.5678	somatic	0	0.183965373148208	0.31604781466191
18	31428096	31437420	2	neutral	AA	36.3789	somatic	0	0.370608062075503	0.851180674259612
18	32071452	32083884	1	loss	A	-1	somatic	0	0.00128615369954202	0.00189645739398991
18	32083884	32086992	2	neutral	AA	100	somatic	0	0.112991510023506	0.318362934564544
18	32086992	32217528	2	neutral	AA	47.8396	somatic	0	3.13970928752649e-14	8.1823436914874e-14
18	34209756	34281240	2	neutral	AA	19.5308	somatic	0	0.00580048119294526	0.0559122364411174
18	37333296	37395456	2	neutral	AA	40.801	somatic	0	1.01269950107682e-07	7.33391389839966e-08
18	39477816	39480924	2	neutral	AA	100	somatic	0	0.0976912357216788	0.2942561354844
18	41143704	41218296	2	neutral	AA	54.5679	somatic	0	3.96842303930765e-08	8.23362167334807e-08
18	43014720	43400112	2	neutral	AA	29.5497	somatic	0	2.16290706211939e-10	1.26053945059823e-10
18	45395448	45423420	2	neutral	AA	54.5678	germline	1	0.00177487752836507	0.00304446135723235
18	46383792	46427304	2	neutral	AA	100	somatic	0	0.035846993708029	0.120073075010187
18	51515100	51543072	2	neutral	AA	54.5678	somatic	0	0.973035681380499	0.894874687086078
18	55135920	55142136	2	neutral	AA	54.5678	somatic	0	0.0492662067266842	0.0904268939220232
18	59089296	59123484	2	neutral	AA	54.5678	somatic	0	0.462789521019291	0.700198380489195
18	62710116	62731872	2	neutral	AA	37.0878	somatic	0	0.0064053858435593	0.00236052575836365
18	64627752	64637076	2	neutral	AA	36.3786	somatic	0	0.400952086506893	0.285161300093833
18	70703892	70775376	2	neutral	AA	36.3804	germline	1	0.389034619146725	0.0526997271879734
18	74579568	74607540	2	neutral	AA	100	somatic	0	0.940025951752201	0.583841591559728
18	74958744	75027120	2	neutral	AA	93.3102	somatic	0	1.00190136415839e-05	0.000116251051691996
18	78675912	78706992	2	neutral	AA	19.9444	germline	1	0.000207495388292677	0.000296914843903706
18	79244676	79387644	2	neutral	AA	6.7581	somatic	0	0.000441366862125326	0.00223241449374612
18	80158428	80260992	3	gain	AAB	4.27086	somatic	0	6.51532879001959e-19	0
18	80260992	80373285	3	gain	AAB	-1	somatic	0	NA	NA
19	5672100	5790204	2	neutral	AA	44.0444	somatic	0	8.17800555355385e-15	7.38309413605975e-12
19	7145292	7449876	1	loss	A	-1	somatic	0	8.58580890464616e-57	0
19	7449876	7452984	7	gain	AAAAABB	28.8249	somatic	0	0.0832729737780459	0.27005144860397
19	8879556	8919960	2	neutral	AA	1.54759	germline	1	0.224732517458593	0.212906769531072
19	8982120	9181032	1	loss	A	-1	somatic	0	1.07265290139417e-35	0
19	10626252	10759896	2	neutral	AA	13.982	germline	1	1.38564029176504e-18	0
19	15157716	15167040	1	loss	A	-1	somatic	0	0.00450685134899884	0.00888131752652788
19	16665096	16683744	1	loss	A	-1	somatic	0	8.01758522200035e-05	3.76903386689609e-05
19	17504256	17550876	2	neutral	AA	27.2477	somatic	0	9.03959002599294e-07	6.1890417627497e-06
19	17550876	17557092	1	loss	A	-1	somatic	0	0.0202987461501708	0.0517483222804059
19	24329424	24907512	3	gain	AAB	1.27294	somatic	0	2.23924659828631e-17	0
19	27244728	27275808	1	loss	A	-1	somatic	0	1.57838168260483e-05	1.1995929833919e-05
19	27275808	27337968	2	neutral	AA	1.41247	germline	1	6.34613640478131e-09	2.16459026258775e-08
19	27337968	27341076	3	gain	AAB	1.94352	germline	1	0.083298349711294	0.270095517864457
19	27341076	27344184	2	neutral	AA	35.2245	germline	1	0.134724065572931	0.350379342427839
19	27344184	27347292	3	gain	AAB	2.03718	germline	1	0.0833491203695748	0.270183672132802
19	27347292	27378372	4	gain	AAAB	0.321636	germline	1	9.64911297915208e-07	2.25339855997042e-07
19	27378372	27400128	4	gain	AAAB	0.424962	germline	1	4.60505976745767e-06	1.66820242086807e-06
19	28550088	28699272	2	neutral	AA	4.37616	somatic	0	0.657577505078388	0.253522364133337
19	51630096	51633204	0	loss	-	-1	germline	1	0.0832675918094647	0.270042101253807
19	57473136	57622320	2	neutral	AA	100	somatic	0	0.468445662014992	0.371256001266561
19	57622320	58007712	2	neutral	AA	49.5452	germline	1	6.7289170778443e-33	0
19	58576476	58585800	3	gain	-	-1	somatic	0	0.00376120968594251	0.00837746080407675
20	65268	68376	3	gain	-	-1	germline	1	0.0833060406246008	0.27010887322213
20	1087800	1137528	2	neutral	AA	58.7808	somatic	0	0.625778544422096	0.451538378480457
20	8745912	9069144	2	neutral	AA	14.2327	somatic	0	0.068803966437834	0.0372503656859153
20	12767664	12829824	2	neutral	AA	55.0723	somatic	0	0.263105384143977	0.203654340447516
20	15418788	15449868	2	neutral	AA	100	somatic	0	0.0830296465178613	0.293567560446453
20	23773092	23847684	2	neutral	AA	13.6576	somatic	0	0.343540535902773	0.286611191465912
20	25314660	25339524	2	neutral	AA	100	somatic	0	0.184423057578826	0.164852255369263
20	26278140	26380704	1	loss	A	-1	somatic	0	1.62305203773175e-15	3.10862446895044e-15
20	26380704	28780080	3	gain	-	-1	somatic	0	NA	NA
20	28780080	28783188	5	gain	-	-1	germline	1	0.0832791249443263	0.270062131579055
20	28783188	28795620	3	gain	-	-1	somatic	0	NA	NA
20	28804944	28823592	8	gain	-	-1	germline	1	2.21038673478317e-05	1.22976192832303e-05
20	28823592	28870212	3	gain	-	-1	somatic	0	0.0422690289219609	0.127869885503489
20	28870212	28873320	6	gain	-	-1	germline	1	0.0832768182138396	0.270058125427248
20	28873320	29690724	3	gain	-	-1	somatic	0	3.42407131844819e-06	2.10026025238008e-07
20	31182564	31188780	10	gain	-	-1	germline	1	0.0143070914397825	0.0366336099527218
20	31232292	31244724	5	gain	AAABB	5.51295	germline	1	0.00941275667410561	0.05073490620819
20	31449852	31462284	1	loss	A	-1	germline	1	0.000537599110698625	0.000685347249977264
20	39813480	39822804	2	neutral	AA	100	somatic	0	0.985776295651009	0.974539470865847
20	40292112	40351164	2	neutral	AA	54.5678	somatic	0	0.000711204521230719	0.0045317711381333
20	46818912	46968096	2	neutral	AA	22.1999	somatic	0	0.868222955806553	0.228564908825177
20	56950992	56982072	2	neutral	AA	36.3796	somatic	0	0.51837633983933	0.296839718523735
20	60500328	60531408	2	neutral	AA	14.3548	somatic	0	0.550289097699078	0.828195171972163
20	61532184	61637856	2	neutral	AA	41.0858	somatic	0	3.81518974932084e-15	2.10209627482527e-12
20	61852308	61861632	2	neutral	AA	11.0268	somatic	0	0.0227746379016524	0.0534043602905271
20	62592012	62610660	2	neutral	AA	36.3786	somatic	0	0.000355292013950658	0.00238710102946416
20	62610660	62632416	3	gain	-	-1	somatic	0	0.000505782340758909	0.00207476736857848
20	64276548	64282764	3	gain	AAB	17.2686	somatic	0	0.0143399996081707	0.0366946648630715
21	10651116	10654224	4	gain	AAAB	9.88885	germline	1	0.083298349711294	0.270095517864457
21	10654224	10660440	5	gain	AAAAA	5.65654	germline	1	0.0143110951421481	0.0366398210571754
21	10660440	10691520	3	gain	AAB	1.25157	germline	1	4.34831390271941e-08	4.15532430686483e-09
21	10691520	10694628	38	gain	AAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBB	100	germline	1	0.0832668229798127	0.270040765937363
21	10694628	10703952	3	gain	AAB	7.6951	germline	1	0.0027175838804197	0.00500903022872579
21	10703952	10707060	7	gain	AAAAABB	47.3983	germline	1	0.0832752804222697	0.270055454683477
21	10707060	10738140	3	gain	AAB	0.740072	somatic	0	4.33742705597184e-08	4.14146716920527e-09
21	15813504	15863232	2	neutral	AA	13.6979	somatic	0	0.550729075218403	0.348307384868437
21	20024844	20062140	2	neutral	AA	30.1459	germline	1	0.436603175817134	0.852413330248277
21	20584284	20606040	2	neutral	AA	36.7139	somatic	0	0.633020480446825	0.816975326840767
21	24637116	24689952	2	neutral	AA	36.392	somatic	0	0.741324047888577	0.56617005329634
21	29159256	29389248	2	neutral	AA	27.4134	germline	1	0.0485633322974145	0.0240403311361319
21	29864772	29954904	2	neutral	AA	26.6015	somatic	0	0.00120091414598583	0.0027289194882798
21	32298336	32444412	2	neutral	AA	3.37763	somatic	0	0.777115642269627	0.766345554100541
21	33550860	33557076	2	neutral	AA	21.8274	germline	1	0.20754476829775	0.530147547370491
21	35415660	35421876	2	neutral	AA	100	germline	1	0.905095185456903	0.923490914959172
21	36139824	36146040	1	loss	A	-1	somatic	0	0.0209057150593252	0.0466180001602451
21	36146040	36155364	1	loss	A	27.4133	somatic	0	0.0101501235204232	0.0265104240832852
21	36929256	37028712	2	neutral	AA	36.3988	somatic	0	3.69056422109737e-12	5.98621152647638e-12
21	37028712	37038036	1	loss	A	-1	somatic	0	0.00609547438057919	0.0135851409106583
21	37613016	37650312	2	neutral	AA	36.3798	somatic	0	0.943503376531274	0.644425835936979
21	38853108	38924592	2	neutral	AA	7.03741	germline	1	0.102722347646186	0.0783621931773751
21	45330180	45358152	2	neutral	AA	7.74949	germline	1	0.0432730170235063	0.159783913460924
21	46641756	46679052	3	gain	AAB	32.8021	somatic	0	1.11717100852275e-08	1.04136876899474e-09
22	10725708	10731924	9	gain	-	-1	germline	1	0.0143076979978343	0.0366350713061802
22	11627028	11630136	4	gain	AABB	18.0748	germline	1	0.083287583398941	0.270076821173488
22	32907504	32919936	2	neutral	AA	100	somatic	0	0.782346711841277	0.92291929594725
22	35434308	35465388	2	neutral	AA	47.0494	somatic	0	0.0596222442366618	0.07884100956259
22	41678280	41787060	2	neutral	AA	15.5916	somatic	0	1.88623763039161e-18	0
22	50641752	50644860	4	gain	AAAB	94.3269	germline	1	0.0832883523838677	0.270078156620084
X	23664312	24177132	1	loss	A	-1	somatic	0	4.46717172175173e-82	0
X	28229964	28301448	3	gain	-	-1	germline	1	1.01918127865424e-16	0
X	46647972	47098632	2	neutral	AA	44.8679	somatic	0	5.11657623554586e-41	0
X	58445940	62688360	2	neutral	AA	0.948583	somatic	0	1.658492553156e-31	0
X	79350348	79598988	2	neutral	AA	21.8299	somatic	0	0.644991470724737	0.0245949954269712
X	81345684	81376764	2	neutral	AA	54.5855	somatic	0	0.912599660149205	0.495221130524998
X	94271856	94278072	2	neutral	AA	100	somatic	0	0.310589191311369	0.797135536981475
X	96571776	97529040	2	neutral	AA	39.8435	somatic	0	7.55001841246878e-26	0
X	98703864	98930748	2	neutral	AA	54.568	somatic	0	0.00174388990507483	0.000448288520664475
X	104929188	105227556	2	neutral	AA	51.5685	somatic	0	0.0990770561765906	0.0752624570780756
X	108770676	108811080	2	neutral	AA	54.5678	somatic	0	0.795053644551557	0.976654979421323
