chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	5668956	5672968	4	gain	AABB	1.44294	germline	1	0.0143158942800299	0.0366490559867728
1	11119258	11245636	2	neutral	AA	27.2031	somatic	0	0.267806456921854	0.575847156126499
1	13644812	13672896	2	neutral	AA	27.2839	somatic	0	0.477692850645418	0.101436858397021
1	16611686	16617704	6	gain	AAAABB	17.3526	germline	1	0.00270133073428271	0.00495937906799593
1	16882496	16942676	3	gain	AAB	1.07927	germline	1	9.33008117526781e-11	1.52555745813743e-12
1	25757040	26134168	2	neutral	AA	10.9597	somatic	0	0.119078032233271	0.216385983791728
1	27668758	27793130	2	neutral	AA	43.7811	somatic	0	1.47820224671241e-07	4.00957405055635e-07
1	28595530	28625620	2	neutral	AA	27.2839	somatic	0	0.0602097978209264	0.160734154345954
1	30613566	30709854	2	neutral	AA	8.51864	somatic	0	8.22389739532906e-07	1.34450926948526e-05
1	31251474	31389888	2	neutral	AA	27.2054	somatic	0	0.00619418148975352	0.00156092666329
1	31430008	31434020	4	gain	AABB	100	germline	1	0.0143319793080783	0.0366991317375563
1	31797106	31803124	2	neutral	AA	100	somatic	0	0.0712646342292663	0.255479482638681
1	31803124	32274534	2	neutral	AA	6.09965	somatic	0	2.07550391163508e-26	0
1	34637602	34645626	1	loss	A	-1	somatic	0	0.000920188569202901	0.00136210702528161
1	49159036	49169066	2	neutral	AA	36.3786	somatic	0	0.290328536951146	0.443301632116877
1	55660482	55668506	1	loss	A	-1	germline	1	0.000848942562950564	0.00164711369067139
1	72300252	72346390	1	loss	A	-1	germline	1	2.03182858806526e-15	0
1	76167820	76474738	2	neutral	AA	42.4544	somatic	0	6.62148070528034e-10	1.82285190830633e-07
1	81076502	81150724	2	neutral	AA	64.1596	somatic	0	0.144983634963193	0.106522617785611
1	105473474	105481498	1	loss	A	-1	somatic	0	0.00100764268014711	0.0016488377469499
1	110835512	110845542	1	loss	A	-1	germline	1	0.000180918957542114	0.000185103646874074
1	113495468	113850530	2	neutral	AA	100	somatic	0	0.0161508896432176	0.000253974853453687
1	125080118	125082124	11	gain	-	-1	germline	1	0.0832748479076187	0.27005494427158
1	125082124	125086136	4	gain	-	-1	germline	1	0.0143145739952615	0.0366457820874826
1	125086136	125162364	3	gain	-	-1	germline	1	0.000163288127090812	0.000599446981379703
1	125162364	125166376	5	gain	-	-1	germline	1	0.0143127102466804	0.036642508444078
1	125166376	143749960	1	loss	A	-1	somatic	0	4.48511620482645e-44	0
1	151958512	152157106	2	neutral	AA	14.7612	germline	1	0.00300279530724822	0.00399626279949328
1	166082758	166189076	2	neutral	AA	100	somatic	0	0.000354988916103355	0.00303838666347678
1	187201926	187492796	2	neutral	AA	75.5952	somatic	0	0.0479163590172222	0.0521351015089832
1	190044428	190126674	2	neutral	AA	21.8271	somatic	0	0.0917378036412562	0.234067175899778
1	204056338	204116518	2	neutral	AA	21.8273	somatic	0	0.114493662578048	0.16143415205394
1	209763408	209837630	2	neutral	AA	27.9355	somatic	0	0.00259521140382678	0.00130483823149563
1	224012026	224014032	9	gain	AAAAAAAAA	1.67401	germline	1	0.0832773079578659	0.270059216739874
1	224332986	224336998	4	gain	-	-1	germline	1	0.0143238959497462	0.0366745543847473
1	228068158	228072170	0	loss	-	-1	germline	1	0.0143096044747184	0.0366408717183279
1	228844480	228904660	2	neutral	AA	21.8271	somatic	0	0.0261177009868723	0.00755900607051718
1	234776222	234782240	6	gain	AAAABB	55.8877	germline	1	0.00270142977449019	0.00495942653947301
1	236096170	236098176	5	gain	AAABB	20.3781	germline	1	0.0832886249472541	0.270078870729529
1	236758150	236960756	2	neutral	AA	21	somatic	0	0.000157622844517173	0.000214782111856882
1	248585526	248631664	1	loss	A	-1	germline	1	1.16639848963159e-14	0
2	3179510	3181516	8	gain	-	-1	germline	1	0.0832802600958702	0.270064343766956
2	24376912	24388948	1	loss	A	-1	germline	1	5.01090606409203e-05	3.98773238868833e-05
2	34473110	34505206	1	loss	A	-1	germline	1	1.66674552542373e-10	3.72335495768539e-12
2	35750932	35766980	1	loss	A	-1	germline	1	4.67022442734155e-06	1.22448946060505e-06
2	48623434	48631458	1	loss	A	-1	germline	1	0.00124197951471919	0.00161375971926803
2	52521092	52559206	1	loss	A	-1	germline	1	3.39437080978685e-11	1.92956761679852e-13
2	89772512	89774518	5	gain	-	-1	germline	1	0.0832891170185296	0.270079725274502
2	89774518	89782542	7	gain	-	-1	germline	1	0.000532395020301091	0.000671267860900548
2	89782542	89790566	4	gain	-	-1	germline	1	0.00270210899672971	0.00496013866161471
2	89796584	89814638	4	gain	-	-1	germline	1	9.6542577213217e-07	2.25438331780126e-07
2	89814638	89818650	3	gain	-	-1	germline	1	0.0143402611476638	0.0367014731891804
2	89818650	89822662	5	gain	-	-1	germline	1	0.0143129432035464	0.0366418069823523
2	89822662	89824668	3	gain	-	-1	germline	1	0.0833279980915585	0.27014724056407
2	89824668	89842722	30	gain	-	-1	germline	1	2.0357438048631e-07	3.04857742383646e-08
2	89842722	89850746	4	gain	-	-1	germline	1	0.000532668528001689	0.000671482072391205
2	91411414	91415426	4	gain	-	-1	germline	1	0.0143137197505892	0.0366429760917557
2	106261832	106269856	1	loss	A	-1	somatic	0	0.00123455957440976	0.00167723585889057
2	132243544	132245550	5	gain	-	-1	germline	1	0.0832891170185296	0.270079725274502
2	146105004	146119046	1	loss	A	-1	germline	1	1.32039141873476e-05	5.11351051457609e-06
2	169464874	169468886	0	loss	-	-1	germline	1	0.0143165156276775	0.0366563062458962
2	172040578	172046596	1	loss	A	-1	germline	1	0.0143641192983202	0.0367910145508217
2	176399616	176407640	1	loss	A	-1	germline	1	0.0206880145692026	0.0563804007276687
2	179201998	179212028	1	loss	A	-1	germline	1	0.000375470606888746	0.000252942276586898
2	212190668	212192674	4	gain	-	-1	somatic	0	0.0832896090921601	0.270080579821448
2	238938672	238962744	2	neutral	AA	54.568	somatic	0	0.0211804241614766	0.022123453585817
2	238996846	238998852	2	neutral	AA	100	somatic	0	0.975517466724249	0.957996827480478
2	239137266	239143284	2	neutral	AA	54.5678	somatic	0	0.00695696643168217	0.0127768417354458
2	239215500	239217506	2	neutral	AA	100	somatic	0	0.172616383915041	0.401487446837899
2	239363944	239365950	2	neutral	AA	36.3786	somatic	0	0.222707861368167	0.462317602697255
2	239432148	239434154	2	neutral	AA	100	somatic	0	0.144409570194837	0.363967857155091
2	239626730	239652808	2	neutral	AA	11.9801	somatic	0	0.117482038696359	0.312023010521043
2	239789216	239791222	2	neutral	AA	100	somatic	0	0.78019186468639	0.888930274496185
2	239875474	239877480	2	neutral	AA	100	somatic	0	0.722896931625656	0.861169828720817
2	240308770	240320806	2	neutral	AA	39.7881	somatic	0	0.0411869622874886	0.0225735311854998
2	240473262	240475268	2	neutral	AA	100	somatic	0	0.885527211409293	0.931088928610967
2	240623712	240627724	2	neutral	AA	12.4881	somatic	0	0.690955461894811	0.853336648795724
2	240846378	240850390	2	neutral	AA	100	somatic	0	0.696439066137793	0.552970275682817
2	241089104	241091110	2	neutral	AA	100	somatic	0	0.259988332699433	0.503795306868728
2	241115182	241133236	2	neutral	AA	18.2052	somatic	0	0.67647887356678	0.652165011710901
2	241193416	241195422	2	neutral	AA	100	somatic	0	0.881159403433541	0.929529446020619
2	241476262	241478268	2	neutral	AA	100	somatic	0	0.207662742475495	0.444702940352865
2	241586592	241592610	3	gain	AAB	6.80823	somatic	0	0.0825643476478434	0.139131194619727
2	241743060	241755096	2	neutral	AA	100	somatic	0	0.847473687183414	0.891887069268903
3	9606734	9701016	2	neutral	AA	50.9534	somatic	0	0.151665898658969	0.0377607430793216
3	32059892	32065910	1	loss	A	-1	germline	1	0.00502904445659905	0.0093112101230578
3	42113964	42148066	2	neutral	AA	100	somatic	0	0.873275658668916	0.830499006228762
3	58870082	59082718	2	neutral	AA	13.1378	somatic	0	0.00233090185392796	0.0364961633135552
3	75555990	76294198	2	neutral	AA	1.7414	somatic	0	0.00200459918673765	0.0112006719311268
3	77778638	77784656	3	gain	AAB	0.867908	germline	1	0.00271176228916276	0.00498087868081964
3	89353258	89369306	1	loss	A	-1	germline	1	1.94315981375978e-05	7.47098345987851e-06
3	91531774	93794542	2	neutral	AA	44.4371	somatic	0	0.0299562208030753	0.177213078470303
3	116235664	116247700	2	neutral	AA	100	somatic	0	0.0743401614287952	0.058090288197674
3	129800236	129960716	2	neutral	AA	34.4135	somatic	0	0.0878268886887598	0.139562078232398
3	130069040	130081076	1	loss	A	-1	germline	1	0.00403250491372618	0.00917185928435149
3	136301682	136307700	0	loss	-	-1	germline	1	0.0143090610257507	0.0366371308710915
3	146666684	146672702	0	loss	-	-1	germline	1	0.0143132538179038	0.0366513946429396
3	147348724	147392856	2	neutral	AA	25.873	somatic	0	0.0829618011323647	0.088333728119254
3	162794924	162909266	1	loss	A	-1	somatic	0	2.7293150133117e-28	0
3	178975320	179294274	2	neutral	AA	22.1458	somatic	0	0.0928007742001584	0.0179249565937418
3	187083572	187103632	2	neutral	AA	27.2839	somatic	0	0.269011203426773	0.529838400323301
4	126378	134402	1	loss	A	-1	germline	1	0.00158370417106992	0.00172040793789019
4	7863520	7865526	4	gain	-	-1	somatic	0	0.0832915774102317	0.270083998028969
4	10210540	10232606	1	loss	A	-1	germline	1	1.19757952513889e-07	5.01724572998796e-09
4	10391080	10401110	1	loss	A	-1	germline	1	0.000271212759234999	0.00025156948872862
4	26288630	26294648	1	loss	A	-1	germline	1	0.00417657807312307	0.00942055869650849
4	40294522	40296528	5	gain	-	-1	germline	1	0.0832866566857013	0.270075452569374
4	49652512	49656524	13	gain	-	-1	germline	1	0.0143085952268406	0.0366354943555051
4	61072670	61076682	0	loss	-	-1	germline	1	0.014309449201727	0.0366408717183279
4	62803848	62811872	1	loss	A	-1	germline	1	0.00147658403931129	0.00160219635556502
4	74559008	74563020	1	loss	A	-1	germline	1	0.0207159217587153	0.0564674533214898
4	93870770	93876788	1	loss	A	-1	germline	1	0.00479499587864776	0.0116291060176392
4	106135454	106141472	1	loss	A	-1	germline	1	0.00409892330795653	0.006847666918672
4	111316952	111322970	1	loss	A	-1	germline	1	0.00542177500813825	0.0107141550542698
4	114253736	114261760	1	loss	A	-1	germline	1	0.00143445801348411	0.00157139500702252
4	121360994	121369018	1	loss	A	-1	germline	1	0.00125251221942135	0.00156005778245327
4	137164262	137178304	1	loss	A	-1	germline	1	8.84318023828436e-05	5.39114694635412e-05
4	156038716	156052758	1	loss	A	-1	germline	1	0.000196315613902761	0.000194530331040443
4	171452820	171458838	1	loss	A	-1	germline	1	0.0143461348677113	0.0367490329211395
4	189270112	189278136	1	loss	A	-1	germline	1	0.00126647130618302	0.00167019936041501
5	816442	820454	1	loss	A	-1	somatic	0	0.0172057632409013	0.0434313903702213
5	2038096	2066180	1	loss	A	-1	germline	1	1.81436562904241e-08	1.03773456494594e-09
5	12810316	12820346	1	loss	A	-1	germline	1	0.000248390096252967	0.000230777734994358
5	23901490	23905502	1	loss	A	-1	germline	1	0.0206665698094883	0.056310094929976
5	45004610	45014640	1	loss	A	-1	germline	1	0.000273537119405387	0.000263768079266202
5	45371708	45377726	1	loss	A	-1	somatic	0	0.0209466519195768	0.0572045061485298
5	46404798	46416834	1	loss	A	-1	germline	1	0.000918232181212114	0.00110730720553498
5	84657212	84659218	0	loss	-	-1	germline	1	0.0832650082953033	0.270037854891801
5	91202790	91206802	1	loss	A	-1	germline	1	0.0165030126310528	0.0433103165810734
5	114919728	114925746	1	loss	A	-1	germline	1	0.00473505071660776	0.00849717399198613
5	118538552	118544570	0	loss	-	-1	germline	1	0.0143190012561636	0.036667067007554
5	137517318	137521330	1	loss	A	-1	germline	1	0.0207522501662101	0.0565488293424726
5	145739912	145743924	1	loss	A	-1	germline	1	0.0236003800622797	0.0656914592190367
5	148082920	148285526	2	neutral	AA	83.4808	somatic	0	0.371063539443656	0.28346580534978
5	150474072	150502156	2	neutral	AA	27.2839	somatic	0	0.0887979412662116	0.20911712897437
5	152135040	152139052	1	loss	A	-1	germline	1	0.0251320626801486	0.0536774700923768
5	163378670	163422802	2	neutral	AA	31.7527	somatic	0	0.760308460264791	0.919515645652567
5	176913152	176949260	2	neutral	AA	36.3786	somatic	0	0.750780858601761	0.617399981311156
5	176949260	177095698	2	neutral	AA	10.9136	somatic	0	6.40792039117791e-06	1.22090679869347e-05
5	178584150	178586156	4	gain	AABB	55.7379	germline	1	0.0832915774102317	0.270083998028969
5	180748624	180768684	4	gain	AAAB	14.3606	germline	1	4.60313636022022e-06	1.66638512333339e-06
5	180949224	181003386	1	loss	A	-1	germline	1	9.72600462672931e-18	0
6	256768	296888	3	gain	-	-1	germline	1	4.4127033784526e-14	1.11022302462516e-16
6	296888	383146	4	gain	-	-1	somatic	0	1.41326173059788e-28	0
6	29879370	32667710	1	loss	A	-1	somatic	0	9.27291449209285e-26	0
6	35787040	35799076	4	gain	-	-1	germline	1	2.21359732063972e-05	1.23117363327596e-05
6	60236168	60240180	4	gain	-	-1	somatic	0	0.0143137974073375	0.0366441452337956
6	66298300	66338420	1	loss	A	-1	germline	1	1.27296823730212e-13	4.44089209850063e-16
6	73435648	73437654	4	gain	-	-1	somatic	0	0.0832920694956371	0.270084852585784
6	73882986	73893016	1	loss	A	-1	germline	1	0.000225983517979955	0.000212688837822883
6	103288940	103315018	1	loss	A	-1	germline	1	1.93530190274709e-08	9.68503055531755e-10
6	107188604	107198634	2	neutral	AA	36.3786	somatic	0	0.888918048079174	0.602911357207811
6	113866578	113976908	2	neutral	AA	9.97298	somatic	0	0.524240865659632	0.837939564196014
6	118644870	118646876	4	gain	AAAA	10.4558	germline	1	0.083290593246486	0.270082288921262
6	123611726	123728074	2	neutral	AA	42.6031	somatic	0	0.0127454244592329	0.0167506630129731
6	131437132	131742044	2	neutral	AA	19.8521	somatic	0	0.586884540961254	0.156261147000005
6	151166142	151286502	2	neutral	AA	100	somatic	0	9.28085630464548e-08	1.08575197388383e-07
6	156502102	157063782	2	neutral	AA	100	somatic	0	0.280319946629069	0.127206844526917
6	157312526	157314532	7	gain	AAAABBB	2.51465	germline	1	0.0832817361966623	0.270066907307141
6	170136884	170179010	2	neutral	AA	21.7808	somatic	0	0.364549587322967	0.387643466343222
7	896682	1277822	2	neutral	AA	3.21576	somatic	0	0.384652349277716	0.147026488164605
7	9761196	9765208	1	loss	A	-1	germline	1	0.0148864310170378	0.0383767928395491
7	25079012	25115120	2	neutral	AA	18.1893	somatic	0	0.16352620698931	0.246905234757896
7	31275546	31279558	0	loss	-	-1	germline	1	0.0143072755358988	0.0366331565870444
7	31337732	31442044	2	neutral	AA	9.03	germline	1	0.000448251114103193	0.00106823167753223
7	31520278	31550368	2	neutral	AA	100	somatic	0	0.00370846180096115	0.00541303120275349
7	31550368	31552374	0	loss	-	-1	germline	1	0.0832664841771072	0.270040418248441
7	46876208	47022646	2	neutral	AA	100	somatic	0	0.0328782154020184	0.15452329616021
7	57485942	57497978	3	gain	AAB	13.1091	germline	1	2.21593576830067e-05	1.23263571085719e-05
7	57650434	57931274	2	neutral	AA	1.90386	somatic	0	0.0166800824622447	0.0518715499630242
7	57931274	57939298	3	gain	AAA	15.2351	germline	1	0.000533448743423074	0.000672854544194523
7	57939298	57983430	2	neutral	AA	1.38527	germline	1	0.082630693779873	0.0276552747446221
7	61046592	61056622	3	gain	-	-1	germline	1	0.000107931045357523	9.14517730211672e-05
7	61056622	62298336	2	neutral	AA	16.3494	somatic	0	2.98027979254078e-06	0.000474186550927458
7	62298336	62378576	2	neutral	AA	0.854671	somatic	0	2.55808072643563e-11	8.00475241646836e-11
7	62402648	62406660	4	gain	-	-1	germline	1	0.0143139527219491	0.0366432099175527
7	62436750	62454804	2	neutral	AA	8.45911	somatic	0	1.95075659239252e-06	1.87902888844071e-05
7	65796800	65822878	3	gain	AAB	0.153076	germline	1	4.39851456101762e-10	1.27734489652198e-11
7	70974286	71030454	2	neutral	AA	100	somatic	0	0.101367795190316	0.112809017988113
7	71971268	72346390	2	neutral	AA	16.0367	somatic	0	1.28604985583184e-06	4.64408258626925e-07
7	90488654	90661170	2	neutral	AA	42.7653	somatic	0	0.150978081424919	0.0106679926429452
7	97098424	97222796	2	neutral	AA	100	somatic	0	0.00818616681885428	0.00252543190589927
7	100949944	100955962	3	gain	AAB	1.16009	germline	1	0.00270433170955679	0.00496422330476598
7	100955962	100957968	6	gain	-	-1	germline	1	0.0832837043640194	0.270070325388351
7	100957968	100959974	17	gain	AAAAAAAAAABBBBBBB	19.9268	germline	1	0.083271895925028	0.270049817374755
7	100959974	100976022	3	gain	AAB	0.662862	germline	1	9.76828600942966e-07	2.36921862351025e-07
7	101202700	101282940	2	neutral	AA	3.48627	somatic	0	0.00111450124416322	0.00480885499596218
7	101966986	102165580	2	neutral	AA	11.3872	somatic	0	2.0743271454705e-07	2.13198690457439e-06
7	105310988	105327036	2	neutral	AA	36.3786	somatic	0	0.739174678665262	0.887665914333477
7	108384180	108444360	2	neutral	AA	35.9774	somatic	0	0.00817600084623889	0.0657237914732252
7	109802422	109814458	1	loss	A	-1	germline	1	6.61122744769661e-05	4.51982570283116e-05
7	114271790	114333976	2	neutral	AA	23.5284	somatic	0	0.128847993889627	0.170333395855313
7	125509402	125549522	2	neutral	AA	27.2839	somatic	0	0.466949932802042	0.518133427595817
7	132171328	132265610	2	neutral	AA	100	somatic	0	2.11335074125655e-05	0.000386425702181392
7	139112088	139188316	2	neutral	AA	34.7499	somatic	0	0.00447826207706511	0.00299152850148643
7	141009764	141045872	2	neutral	AA	100	somatic	0	0.103779703330801	0.237902468296009
7	143848254	143850260	4	gain	AAAA	100	germline	1	0.083290593246486	0.270082288921262
7	144379844	144490174	2	neutral	AA	12.3472	somatic	0	0.213959764783028	0.237091284397756
7	152401838	152407856	11	gain	AAAAAAAAABB	1.70036	germline	1	0.00270072241722389	0.00495861958100807
7	152413874	152494114	2	neutral	AA	4.10935	somatic	0	1.13246968509243e-07	5.54578594491595e-07
7	155816050	155860182	2	neutral	AA	9.2258	somatic	0	0.00879919695800419	0.0345168821982489
7	157972500	158054746	2	neutral	AA	3.69897	somatic	0	0.00521473890902132	0.0347867497658614
7	158151034	158153040	4	gain	AABB	4.477	germline	1	0.0832910853271814	0.270083143474129
7	158594360	158596366	5	gain	AAABB	13.7227	germline	1	0.0832861646262004	0.27007459803427
7	158987536	159025650	2	neutral	AA	30.4374	germline	1	0.157768473340602	0.3057628357921
7	159025650	159146010	2	neutral	AA	6.7635	germline	1	7.57433939769283e-07	5.92406538302281e-06
8	643926	649944	1	loss	A	-1	germline	1	0.00677898891760997	0.00896352672700429
8	5737160	5749196	1	loss	A	-1	germline	1	9.40212217846089e-05	4.98698791219221e-05
8	8984874	9073138	2	neutral	AA	21.6553	somatic	0	0.425332178612627	0.342287505629549
8	11388062	11390068	0	loss	-	-1	germline	1	0.0832743559046334	0.270054089783842
8	15347906	15363954	2	neutral	AA	27.2839	somatic	0	0.994784644031819	0.888191739041391
8	21867406	21985760	2	neutral	AA	100	somatic	0	0.378939367190244	0.645252342953564
8	22980736	22992772	2	neutral	AA	36.3786	somatic	0	0.53828100076861	0.570650487031038
8	25115120	25133174	1	loss	A	-1	germline	1	5.32343239965899e-07	1.19627168282399e-07
8	25207396	25213414	1	loss	A	-1	germline	1	0.0220129231338796	0.0606019579715696
8	37666662	37823130	2	neutral	AA	20.8899	somatic	0	0.0968844519851205	0.377639457795456
8	39375774	39528230	1	loss	A	-1	germline	1	2.58783586991747e-43	0
8	40077874	40120000	2	neutral	AA	15.5934	somatic	0	0.216711363775889	0.215612388757387
8	40332636	40519194	2	neutral	AA	27.4087	somatic	0	0.0850818395509674	0.161823722147962
8	40916382	40922400	0	loss	-	-1	germline	1	0.0143115455125196	0.0366467174611684
8	42332618	42338636	1	loss	A	-1	germline	1	0.0215762141017206	0.0592097997274118
8	43237324	43239330	7	gain	AAAABBB	17.5996	germline	1	0.0832807521271127	0.270065198278378
8	43239330	43241336	9	gain	AAAAAABBB	3.43053	germline	1	0.0832773079578659	0.270059216739874
8	43241336	43243342	4	gain	AAAB	100	germline	1	0.0832930536735128	0.270086561705334
8	53971430	54017568	2	neutral	AA	21.8271	somatic	0	0.00966764099933816	0.0101089296544243
8	68440708	68916130	2	neutral	AA	8.39508	somatic	0	1.15089270335166e-14	1.25703891740159e-11
8	73842866	73882986	2	neutral	AA	76.5106	somatic	0	0.038434766437755	0.0579310132065239
8	80617128	80665272	2	neutral	AA	27.284	somatic	0	0.469105106516572	0.737641302306942
8	87790584	87888878	2	neutral	AA	21.8271	somatic	0	0.114397999047816	0.119059745503961
8	92625044	92966064	2	neutral	AA	25.0707	germline	1	0.00173578296834761	0.0275663000324632
8	96651086	96687194	2	neutral	AA	54.5678	somatic	0	0.496585316941933	0.783147005120563
8	101292970	101381234	2	neutral	AA	15.5909	somatic	0	0.731971746987128	0.199054844070858
8	101862674	101989052	2	neutral	AA	25.5193	somatic	0	0.000731140837562147	0.00111717039517101
8	102863668	102984028	2	neutral	AA	13.2468	somatic	0	0.000206110838283425	0.000128195702555733
8	104546702	104548708	0	loss	-	-1	germline	1	0.0832782919944482	0.270060925741008
8	106727224	106837554	2	neutral	AA	44.1759	somatic	0	0.661291724227421	0.920406357222033
8	115673984	115840482	2	neutral	AA	6.45129	somatic	0	0.00143640943258911	0.0033877174499698
8	116967854	117072166	2	neutral	AA	27.3983	somatic	0	0.879181749087249	0.54826042123812
8	124440204	124576612	2	neutral	AA	36.75	somatic	0	0.292410674426528	0.319025330356044
8	125266676	125352934	2	neutral	AA	21.8155	somatic	0	0.00158896875205205	0.000769787245333275
8	126077100	126309796	2	neutral	AA	79.8298	somatic	0	2.52639643872004e-07	4.43929413331823e-05
8	127146298	127182406	2	neutral	AA	36.3834	somatic	0	0.780862985069451	0.992486486756753
8	129489306	129575564	2	neutral	AA	27.2839	somatic	0	0.00203038636951248	0.000649531590752206
8	132253574	132269622	2	neutral	AA	54.5781	somatic	0	0.194898728774787	0.448289398767274
8	142315670	142458096	2	neutral	AA	32.4072	somatic	0	0.000725562618545042	0.00369139389050255
8	144125082	144127088	7	gain	AAAAABB	7.02669	germline	1	0.0832807521271127	0.270065198278378
9	23361876	23377924	1	loss	A	-1	germline	1	5.50315623915902e-06	1.5543516758143e-06
9	33795082	33803106	3	gain	-	-1	somatic	0	0.000539697061742985	0.000683946811066871
9	40912370	40916382	6	gain	-	-1	germline	1	0.0143117784526627	0.0366399364751896
9	40922400	40924406	5	gain	-	-1	germline	1	0.0832866566857013	0.270075452569374
9	42386780	42388786	7	gain	AAAABBB	12.0148	somatic	0	0.0832807521271127	0.270065198278378
9	69122748	69128766	1	loss	A	-1	germline	1	0.00468338797087562	0.00935557278988886
9	72914088	72970256	2	neutral	AA	86.6685	somatic	0	0.114790348839465	0.109699822535918
9	86189796	86249976	2	neutral	AA	27.2839	somatic	0	0.184660140587479	0.202336976788307
9	86938034	87056388	2	neutral	AA	100	somatic	0	0.0385575084873658	0.14126892758457
9	93607984	93874782	2	neutral	AA	48.7017	somatic	0	2.66102387388923e-06	2.42167128167159e-05
9	96079376	96089406	2	neutral	AA	36.3786	somatic	0	0.184606972837412	0.350817102553822
9	96659110	96665128	2	neutral	AA	36.3786	somatic	0	0.856449170276237	0.864289733555231
9	98159598	98287982	2	neutral	AA	15.5908	somatic	0	0.978352258958256	0.685441396330855
9	103012112	103016124	1	loss	A	-1	germline	1	0.0159148571322488	0.0414269843898504
9	105335060	105417306	2	neutral	AA	25.5929	somatic	0	0.109965586649338	0.0613446258808411
9	107742260	107842560	2	neutral	AA	14.0027	somatic	0	0.928462564401791	0.70801996395071
9	110689074	110691080	0	loss	-	-1	germline	1	0.0832709119496687	0.270048108424936
9	114061160	114083226	2	neutral	AA	36.3786	somatic	0	0.0381395151698365	0.0551566148112516
9	117980884	117990914	2	neutral	AA	54.5678	somatic	0	0.558207335603126	0.915751865728331
9	120572636	121066112	2	neutral	AA	12.057	germline	1	0.00338039488403894	0.0022276302091091
9	123218550	123256664	2	neutral	AA	100	somatic	0	0.164809053773958	0.321813701766641
9	126706984	127405072	2	neutral	AA	77.2245	somatic	0	0.914546635125695	0.200357149234752
9	127405072	128803254	2	neutral	AA	3.32497	somatic	0	4.14645862221868e-23	1.11022302462516e-16
9	129425114	129441162	3	gain	AAB	0.340698	germline	1	9.75991644673313e-07	2.2925560994036e-07
9	129441162	129445174	3	gain	AAB	3.83624	germline	1	0.0147250216625759	0.0376385445217462
9	129445174	129595624	2	neutral	AA	9.38115	somatic	0	0.0408962008919038	0.0544572058196883
9	130275658	130291706	2	neutral	AA	36.3786	somatic	0	0.281796348620552	0.16049570041122
9	133206424	133228490	2	neutral	AA	91.1471	germline	1	0.0700321564948048	0.240135832020481
9	134444126	134600594	2	neutral	AA	6.01832	somatic	0	0.000385250262555076	0.0027137291217586
9	137326748	137328754	6	gain	AAAABB	2.75468	germline	1	0.0832837043640194	0.270070325388351
9	137342796	137362856	1	loss	A	-1	germline	1	7.87253203905976e-07	2.20891053226424e-07
10	4665956	4667962	0	loss	-	-1	germline	1	0.0832709119496687	0.270048108424936
10	11941718	12036000	2	neutral	AA	26.8101	somatic	0	2.49512835744291e-05	6.62633741876917e-07
10	12627770	12685944	2	neutral	AA	18.1909	somatic	0	0.645717222321924	0.480371294272477
10	13971790	14094156	2	neutral	AA	76.7124	somatic	0	0.581380690701027	0.628211068577334
10	21325786	21327792	1	loss	A	-1	somatic	0	0.116646651781803	0.323910431664473
10	23060976	23534392	2	neutral	AA	36.1175	somatic	0	9.1935336054111e-06	6.03075120886309e-06
10	23915532	23955652	2	neutral	AA	18.192	somatic	0	0.159729885038712	0.212254829345215
10	26569470	26589530	2	neutral	AA	0.530332	germline	1	0.057200504489079	0.0428470546324758
10	26864352	26952616	2	neutral	AA	0.743003	germline	1	0.252470557766443	0.350083656194724
10	30410960	30455092	2	neutral	AA	10.9769	somatic	0	0.236966120117236	0.230823251474037
10	33564392	33576428	3	gain	AAB	5.66515	germline	1	2.23755446722617e-05	1.27072878074452e-05
10	36172192	36284528	2	neutral	AA	36.3786	somatic	0	0.075544990554744	0.177407655001139
10	38485110	38491128	4	gain	AAAA	5.10927	germline	1	0.002702675134463	0.00496113579008239
10	38491128	38525230	3	gain	AAB	1.01134	germline	1	1.14486133231872e-12	1.27675647831893e-14
10	38525230	38529242	16	gain	AAAAAAAAAAAAAAAB	1.36184	germline	1	0.0143091386602029	0.0366387674506383
10	38573374	38575380	5	gain	-	-1	germline	1	0.0832881328783335	0.27007801618653
10	38575380	38577386	2	neutral	AA	10.9347	somatic	0	0.0944921129625343	0.289033852775917
10	38577386	38581398	5	gain	AAAAA	1.32471	germline	1	0.014313176163757	0.036642508444078
10	38918406	38920412	24	gain	-	-1	germline	1	0.0832694360042898	0.270045545015009
10	39343678	39359726	1	loss	A	-1	germline	1	6.35253851798892e-05	3.89651931886892e-05
10	41827106	41843154	2	neutral	AA	68.1539	somatic	0	0.20584333733471	0.235296068799467
10	41857196	41911358	38	gain	AAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBB	7.49135	germline	1	4.32306567939724e-08	4.12507039637688e-09
10	42300522	42320582	3	gain	AAA	15.9721	germline	1	5.11016065302464e-08	1.142500583029e-08
10	42320582	42322588	2	neutral	AA	42.8565	somatic	0	0.0955520190418739	0.290769620651379
10	43277444	43506128	2	neutral	AA	14.2499	somatic	0	5.083678589648e-07	7.42550250720786e-06
10	46515128	46561266	4	gain	AAAB	2.24098	germline	1	2.08090375123817e-15	0
10	49339576	49520116	2	neutral	AA	13.642	somatic	0	1.65137362793889e-05	0.000152359429077431
10	49792932	49802962	1	loss	A	-1	germline	1	0.000341863226845883	0.000306351334360855
10	57166988	57205102	2	neutral	AA	1.5818	somatic	0	0.700848213481365	0.817019029724103
10	62773758	62866034	2	neutral	AA	27.2839	somatic	0	0.848123412779755	0.910279967122333
10	65546050	65556080	1	loss	A	-1	germline	1	0.000323446356740975	0.00028029884168701
10	67724566	67728578	1	loss	A	-1	germline	1	0.0201984032715496	0.0548178109777183
10	68330378	68362474	2	neutral	AA	21.8291	germline	1	0.00227745309544201	0.0133595334036041
10	77437618	77574026	2	neutral	AA	7.36306	somatic	0	0.00461788405607914	0.00845055757684743
10	82288126	82364354	2	neutral	AA	27.2839	somatic	0	0.107866678471629	0.143888692334892
10	92312108	92368276	2	neutral	AA	27.2839	somatic	0	0.000325841547524863	0.000500255308486963
10	98929902	98935920	1	loss	A	-1	germline	1	0.00419901805476953	0.00725468534724005
10	101485546	101487552	2	neutral	AA	100	somatic	0	0.645070223705965	0.81789681524942
10	101487552	101690158	3	gain	AAB	0.545772	somatic	0	1.33321323888558e-64	0
10	106269856	106273868	1	loss	A	-1	germline	1	0.0197752757644499	0.0534901177351716
10	112352048	112358066	1	loss	A	-1	somatic	0	0.0050846331204601	0.00981923116788963
10	120185478	120416168	2	neutral	AA	13.6437	somatic	0	0.000550959670991437	0.00483927514365601
10	120466318	120470330	1	loss	A	-1	germline	1	0.0166767278926214	0.0438078531586878
10	127389024	127399054	2	neutral	AA	22.442	somatic	0	0.791212239339255	0.729010782977434
10	128464240	128466246	9	gain	AAAAAABBB	11.6007	germline	1	0.0832773079578659	0.270059216739874
10	131728002	131730008	3	gain	-	-1	somatic	0	0.0838540855565014	0.271059474370159
10	131730008	131916566	2	neutral	AA	4.06968	somatic	0	5.63869351277223e-05	0.000287199841509933
10	132887470	132981752	2	neutral	AA	3.53255	somatic	0	0.000150263645024827	0.000633294325277256
11	196588	256768	2	neutral	AA	27.3292	germline	1	0.0599242199363456	0.119637714108655
11	4643890	4667962	2	neutral	AA	36.3786	somatic	0	0.425069502665084	0.468474055786333
11	5763238	5785304	1	loss	A	-1	germline	1	4.08575756620852e-08	5.4519739833836e-09
11	28984694	28992718	1	loss	A	-1	somatic	0	0.00156576841844512	0.00196064172593413
11	42946454	42950466	3	gain	AAB	10.1036	somatic	0	0.0143243621880051	0.0366635577598994
11	55116856	55122874	1	loss	A	-1	somatic	0	0.00569784263523427	0.00959352086309928
11	55247246	55249252	4	gain	AAAA	4.36618	somatic	0	0.0832969904792166	0.270093398262478
11	55249252	55367606	2	neutral	AA	100	somatic	0	0.596017201123513	0.776633152534173
11	55598296	55684554	1	loss	A	-1	germline	1	4.80884853756595e-24	0
11	66942226	66948244	1	loss	A	-1	germline	1	0.00562911578915942	0.00995392774682757
11	68159868	68208012	2	neutral	AA	13.642	somatic	0	0.903394031591869	0.760176564866408
11	70370480	70372486	3	gain	AAB	20.1498	somatic	0	0.0833028959703821	0.270103653335032
11	71560038	71584110	2	neutral	AA	17.2754	germline	1	0.00026491395519614	0.000479998366520684
11	78542924	78587056	2	neutral	AA	100	somatic	0	0.0241769486188357	0.015414330762384
11	93720320	93812596	2	neutral	AA	87.1931	somatic	0	0.0143604296002527	0.0161367357707799
11	96729320	97106448	2	neutral	AA	47.5936	somatic	0	0.0500874562484344	0.288776961197845
11	107369144	107373156	1	loss	A	-1	somatic	0	0.0167041975384768	0.0428747857840914
11	107511570	107585792	2	neutral	AA	18.262	somatic	0	0.537530345513565	0.183941208955008
11	111557672	111575726	2	neutral	AA	100	germline	1	0.0613950523769639	0.0611681591165542
11	111593780	112281838	2	neutral	AA	6.67255	germline	1	3.69166133598626e-08	8.21657467620085e-08
11	118765230	118877566	2	neutral	AA	16.5498	somatic	0	8.98093744923163e-10	1.39664169118703e-09
11	125395060	125413114	2	neutral	AA	56.3821	somatic	0	0.0568434255843711	0.127342229941187
11	125413114	125535480	2	neutral	AA	25.7976	germline	1	0.0774694846275588	0.14589998283619
11	127980794	128004866	2	neutral	AA	100	somatic	0	0.816725266134107	0.426123709787688
12	2136390	2148426	1	loss	A	-1	germline	1	8.02671778714293e-05	3.51250241064083e-05
12	2254744	2256750	6	gain	-	-1	germline	1	0.0832822282349693	0.270067761824483
12	18094120	18100138	1	loss	A	-1	somatic	0	0.00567628463290689	0.0102276185680407
12	31849262	31911448	3	gain	-	-1	germline	1	5.81160869844928e-22	0
12	33233402	33241426	1	loss	A	-1	germline	1	0.00111117764673819	0.00151158396563711
12	34104006	34114036	1	loss	A	-1	germline	1	0.000893379094344615	0.0012112735778298
12	37616512	37624536	1	loss	A	-1	germline	1	0.00118264229151614	0.00155291694007054
12	37690734	37740884	2	neutral	AA	4.65077	somatic	0	0.000116049043175049	0.000426623013754401
12	39710776	39714788	1	loss	A	-1	germline	1	0.0155556991700016	0.0403959822351927
12	45510122	45516140	1	loss	A	-1	somatic	0	0.00479753576519064	0.0085450976002065
12	45726770	45901292	2	neutral	AA	13.9355	somatic	0	0.00400371171223389	0.003418849786611
12	49197150	49331552	2	neutral	AA	12.268	somatic	0	5.55638123664302e-08	3.61980573737597e-07
12	51165036	51321504	2	neutral	AA	65.6111	somatic	0	1.70000292863071e-08	7.3798858912788e-08
12	56823962	56833992	2	neutral	AA	100	somatic	0	0.888832610353732	0.894441372038365
12	88005226	88031304	2	neutral	AA	18.1893	somatic	0	0.836157684950204	0.965782566966706
12	90091466	90097484	1	loss	A	-1	germline	1	0.0030247537947485	0.00608039412098116
12	97928908	98384270	2	neutral	AA	12.3234	somatic	0	1.74519726969315e-08	4.19800641338064e-06
12	99262898	99393288	2	neutral	AA	52.8709	somatic	0	0.000278377030917166	0.000871895752364904
12	103559750	103710200	2	neutral	AA	13.0282	somatic	0	0.0192227394140034	0.0144347479084477
12	110711140	110713146	2	neutral	AA	100	somatic	0	0.130643161386949	0.344538983985441
12	114703080	114789338	2	neutral	AA	14.593	somatic	0	0.000219366322254147	0.000330591334401276
12	123114238	123214538	2	neutral	AA	10.4634	somatic	0	0.000191916405237565	9.02750798568164e-05
12	132155280	132159292	1	loss	A	-1	somatic	0	0.0204892187021912	0.0557194014246984
13	22019862	22023874	0	loss	-	-1	germline	1	0.0143081294413063	0.0366347930112617
13	22597590	22653758	2	neutral	AA	54.5678	somatic	0	0.232547954472888	0.0755309191402955
13	23377924	23385948	2	neutral	AA	56.4842	somatic	0	0.733731760626501	0.812848329302835
13	23909514	23937598	2	neutral	AA	54.5704	somatic	0	0.493777172460552	0.383931900124215
13	24394966	24433080	2	neutral	AA	27.2839	somatic	0	0.658804108103422	0.723537101942343
13	26037880	26047910	2	neutral	AA	54.568	somatic	0	0.106665116959662	0.355547865358335
13	26475188	26479200	1	loss	A	-1	germline	1	0.0163085318032128	0.042711744989206
13	27167258	27185312	2	neutral	AA	100	somatic	0	0.0192940710961433	0.0138243874525981
13	29604548	29863322	2	neutral	AA	43.6818	somatic	0	0.345793371370057	0.39538551402611
13	32352768	32402918	2	neutral	AA	22.5349	somatic	0	0.24086777071442	0.202680146573792
13	33839214	33873316	2	neutral	AA	36.3786	somatic	0	0.286885844416231	0.472539591672028
13	34254456	34268498	2	neutral	AA	15.5936	somatic	0	0.930786513299359	0.843065829304935
13	35111018	35151138	2	neutral	AA	32.3353	somatic	0	0.029175955017706	0.0731996725922578
13	37498158	37512200	1	loss	A	-1	germline	1	2.22650907163801e-05	7.53255538266107e-06
13	40162126	40186198	2	neutral	AA	54.5678	somatic	0	0.0155173814536292	0.106745783571278
13	40465032	40481080	2	neutral	AA	14.0938	somatic	0	0.251671582971599	0.315841906716304
13	41217282	41458002	2	neutral	AA	28.2647	somatic	0	0.000118369478894165	8.85704788562425e-05
13	41458002	41516176	2	neutral	AA	44.7689	somatic	0	0.000478030589794621	0.00204518465146453
13	42980556	42992592	2	neutral	AA	54.5678	somatic	0	0.353394400304063	0.620774239936179
13	44671614	44677632	2	neutral	AA	54.5678	somatic	0	0.142415380215866	0.138640652073282
13	45423864	45425870	0	loss	-	-1	germline	1	0.083268452052477	0.270043836084926
13	45449942	45536200	2	neutral	AA	17.2641	somatic	0	0.89568826465479	0.715058465158141
13	46958454	47030670	2	neutral	AA	21.8571	somatic	0	0.128859089299816	0.179098526741011
13	48958436	48962448	1	loss	A	-1	germline	1	0.0221059431697413	0.0557580983948777
13	50200150	50264342	2	neutral	AA	44.2385	somatic	0	0.498702273238368	0.374686006809824
13	50326528	50362636	2	neutral	AA	54.5678	somatic	0	0.418508932724119	0.259770123613442
13	52153994	52739746	2	neutral	AA	61.621	somatic	0	0.0698314584483282	0.0233406665228748
13	61961328	61963334	1	loss	A	-1	germline	1	0.0833235678602991	0.270139548327097
13	63028520	63064628	3	gain	AAB	0.249437	germline	1	1.995483841978e-09	3.73549857712874e-10
13	63064628	63068640	4	gain	AABB	2.26443	germline	1	0.0143152729561703	0.0366478867076506
13	65279252	65335420	2	neutral	AA	36.3786	somatic	0	0.317903401773419	0.172533513822002
13	70203982	70248114	2	neutral	AA	36.3786	somatic	0	0.49705829472437	0.869662210259679
13	71473780	71511894	2	neutral	AA	45.8045	somatic	0	0.344494307061066	0.127236441538895
13	71903064	71907076	1	loss	A	-1	germline	1	0.0245367054239532	0.0564745994796511
13	72232048	72238066	1	loss	A	-1	germline	1	0.0050720134992214	0.00953727290013517
13	74336342	74394516	2	neutral	AA	54.5686	somatic	0	0.00128245775085933	0.00500511347373311
13	77118664	77184862	2	neutral	AA	100	somatic	0	0.0747278913665757	0.0400482367713179
13	77999298	78073520	2	neutral	AA	36.3786	somatic	0	0.0289142776780489	0.0931091402447047
13	78478732	78520858	2	neutral	AA	60.292	somatic	0	0.98993893558425	0.635773377665542
13	79174814	79206910	2	neutral	AA	100	somatic	0	0.4878821011962	0.234376136993493
13	82591032	82599056	1	loss	A	-1	germline	1	0.00172914100369221	0.00159570303111423
13	97676152	97746362	2	neutral	AA	36.534	somatic	0	0.0241455725702893	0.151368554086768
13	98602924	98606936	1	loss	A	-1	germline	1	0.0144848383975669	0.0370175917949088
13	99924878	99958980	2	neutral	AA	10.1327	somatic	0	0.62610441226434	0.266590585860059
13	106693122	106733242	2	neutral	AA	100	somatic	0	0.444241208351323	0.852270762944711
13	108293910	108299928	1	loss	A	-1	germline	1	0.00656476907749976	0.00933493092779369
13	109022088	109024094	1	loss	A	-1	germline	1	0.0833176611820756	0.270129292259818
13	109216670	109218676	0	loss	-	-1	germline	1	0.0832674681100829	0.270042127162736
13	112675014	112795374	2	neutral	AA	38.8751	somatic	0	0.0323293070531839	0.143880850988572
13	113395168	113401186	1	loss	A	-1	germline	1	0.00633770869438032	0.00961120872493981
13	113599780	113647924	2	neutral	AA	19.0347	somatic	0	0.284879845226188	0.789403268771919
14	0	16092132	4	gain	AAAB	-1	somatic	0	NA	NA
14	16092132	16094138	10	gain	-	-1	germline	1	0.083276815943107	0.270058362242268
14	16094138	16096144	4	gain	-	-1	germline	1	0.0832935457659831	0.270087416268069
14	16096144	18489302	4	gain	AAAB	-1	somatic	0	NA	NA
14	18491308	18659812	4	gain	AAAB	-1	somatic	0	NA	NA
14	18659812	18661818	6	gain	AAAABB	100	germline	1	0.0832837043640194	0.270070325388351
14	18661818	18681878	4	gain	AAAB	-1	somatic	0	NA	NA
14	18681878	18693914	3	gain	AAB	13.4732	germline	1	0.000114682026001006	0.000103805017174774
14	18693914	19727004	4	gain	AAAB	-1	somatic	0	NA	NA
14	19727004	19953682	4	gain	AAAB	0.517496	germline	1	3.90112117957949e-35	0
14	34346732	34350744	1	loss	A	-1	germline	1	0.0210572979795328	0.0575387634016862
14	41141054	41201234	1	loss	A	-1	germline	1	9.0231325376611e-18	0
14	59748710	59750716	0	loss	-	-1	germline	1	0.0832733719057271	0.270052380814287
14	69596164	69732572	2	neutral	AA	100	somatic	0	0.355880713623729	0.381193674378947
14	77373426	77383456	2	neutral	AA	100	somatic	0	0.115381548517733	0.28640386159837
14	82031358	82037376	1	loss	A	-1	germline	1	0.0208469856483637	0.0568852721744402
14	94803560	94871764	2	neutral	AA	100	somatic	0	0.635965737463536	0.160303386161646
14	99926884	99928890	6	gain	AAABBB	88.3611	germline	1	0.0832837043640194	0.270070325388351
14	100275928	100318054	2	neutral	AA	13.8638	somatic	0	0.0756348509799552	0.0310056299378449
14	105329042	105381198	2	neutral	AA	34.8144	somatic	0	0.345620981068844	0.199429796381217
15	17024922	17026928	4	gain	-	-1	germline	1	0.083290593246486	0.270082288921262
15	17079084	17083096	13	gain	-	-1	germline	1	0.0143089057579611	0.0366364294994368
15	20340840	20342846	23	gain	-	-1	germline	1	0.083270419965521	0.270047253952986
15	20342846	20671830	7	gain	-	-1	germline	1	9.8892313015547e-17	0
15	22224474	22252558	5	gain	AAAAB	7.86692	germline	1	2.03901266047406e-07	3.05102959563541e-08
15	22268606	22270612	5	gain	AAABB	13.068	germline	1	0.0832866566857013	0.270075452569374
15	23426068	23428074	0	loss	-	-1	germline	1	0.0832650082953033	0.270037854891801
15	24029874	24609608	2	neutral	AA	36.3786	somatic	0	0.45988033183117	0.840168015061226
15	39287510	39935448	2	neutral	AA	11.6574	somatic	0	2.35072292273888e-10	5.33408095471088e-10
15	40840154	40882280	2	neutral	AA	17.9251	somatic	0	0.446028934040739	0.345360414961753
15	48316516	48551218	2	neutral	AA	13.3966	germline	1	0.000603321855751173	0.00372473754950486
15	51971448	51981478	1	loss	A	-1	germline	1	0.00027108648624764	0.000268351436951697
15	58302384	58326456	2	neutral	AA	36.3786	somatic	0	0.0291432977595547	0.0152997069183134
15	65104730	65144850	2	neutral	AA	18.1893	germline	1	0.000109104107928762	0.000221112527940548
15	71415606	71421624	1	loss	A	-1	somatic	0	0.00670743749115347	0.00961893474438391
15	78029388	78115646	2	neutral	AA	33.6728	somatic	0	0.0213187215486703	0.0312766449340431
15	78115646	78203910	2	neutral	AA	100	somatic	0	0.30503392112861	0.216973736680584
15	90119550	90257964	2	neutral	AA	100	somatic	0	8.40187063340285e-05	0.000758871792896798
15	99876734	99880746	1	loss	A	-1	somatic	0	0.0228453525354939	0.0550720720801436
16	846532	848538	5	gain	AAABB	100	germline	1	0.0832866566857013	0.270075452569374
16	1025066	1027072	4	gain	AABB	15.9847	germline	1	0.0832910853271814	0.270083143474129
16	21558482	21582554	4	gain	AABB	2.08267	germline	1	1.98136807426767e-09	7.57691687169881e-11
16	22613638	22699896	4	gain	AABB	2.96725	somatic	0	1.41504218370509e-28	0
16	23034898	23038910	1	loss	A	-1	somatic	0	0.0210535943276291	0.0574620365657572
16	29835238	30465122	2	neutral	AA	9.71532	somatic	0	2.26447768547641e-12	1.82055037711848e-10
16	30547368	30651680	2	neutral	AA	49.024	somatic	0	0.00481406576026358	0.0232964178992974
16	34061880	34065892	19	gain	AAAAAAAAAAAABBBBBBB	100	germline	1	0.0143080518116843	0.0366343254549589
16	34069904	34071910	4	gain	AAAA	6.03894	germline	1	0.0832925615833974	0.270085707144572
16	34073916	34083946	2	neutral	AA	10.9143	germline	1	0.000416896973156697	0.00157343994628167
16	34083946	34085952	15	gain	AAAAAAAAABBBBBB	75.3779	germline	1	0.0832723879162396	0.270050671852626
16	34085952	34095982	2	neutral	AA	7.19978	somatic	0	0.00955271212677884	0.0372990425281726
16	34095982	34099994	10	gain	AAAAAAABBB	6.76722	germline	1	0.0143098373869923	0.0366387674506383
16	34099994	34160174	2	neutral	AA	4.15236	germline	1	0.0442289722887534	0.0367745847276925
16	34160174	34162180	2	neutral	AA	-1	germline	1	NA	NA
16	34162180	34164186	4	gain	AABB	1.11113	somatic	0	0.0832955141594148	0.270090834538747
16	34164186	34174216	2	neutral	AA	-1	somatic	0	NA	NA
16	34174216	34176222	6	gain	AAAABB	2.02784	somatic	0	0.0832837043640194	0.270070325388351
16	34176222	34192270	2	neutral	AA	-1	somatic	0	NA	NA
16	34214336	34218348	2	neutral	AA	-1	germline	1	NA	NA
16	34218348	34256462	2	neutral	AA	40.601	germline	1	0.275022481842323	0.376859313056931
16	34256462	34597482	2	neutral	AA	-1	germline	1	NA	NA
16	34597482	34954550	2	neutral	AA	0.423593	germline	1	1.39033123800377e-22	0
16	34956556	34958562	2	neutral	AA	11.9771	germline	1	0.291927955560768	0.537290806277835
16	35983628	36089946	2	neutral	AA	5.09687	germline	1	0.0502733184374868	0.0511498455881696
16	36122042	36124048	3	gain	-	-1	germline	1	0.083318645604892	0.270131001584627
16	36124048	36126054	6	gain	-	-1	germline	1	0.0832822282349693	0.270067761824483
16	36190246	36198270	4	gain	-	-1	germline	1	0.000532660320866017	0.000671602058816667
16	50266348	50394732	2	neutral	AA	25.5992	somatic	0	0.0310561438888345	0.0782860198908922
16	57359564	57479924	2	neutral	AA	18.1433	somatic	0	0.357374147337279	0.502525294428239
16	57704596	57822950	2	neutral	AA	24.5594	somatic	0	0.432066818177038	0.732073475775992
16	65321378	65323384	0	loss	-	-1	germline	1	0.083268452052477	0.270043836084926
16	66244138	66581146	2	neutral	AA	100	somatic	0	2.78225278302666e-06	0.000344099400081177
16	66581146	68336396	2	neutral	AA	1.97605	germline	1	1.88109586878491e-19	0
16	68336396	68524960	2	neutral	AA	72.0133	germline	1	2.31867666227708e-09	5.68222977226363e-07
16	68524960	69507900	2	neutral	AA	5.77555	somatic	0	4.53454442448158e-35	0
16	70149820	70163862	3	gain	AAB	2.50854	germline	1	4.68927262052387e-06	1.78951469942401e-06
16	72587110	72635254	2	neutral	AA	13.642	germline	1	6.69954375449248e-05	0.000133433489569956
16	74109664	74111670	0	loss	-	-1	germline	1	0.0832709119496687	0.270048108424936
16	78338312	78350348	1	loss	A	-1	germline	1	3.99800351320756e-05	3.24724698115286e-05
16	80079520	80135688	2	neutral	AA	46.1313	somatic	0	0.0808549834386059	0.150312595696932
17	4661944	4722124	2	neutral	AA	33.4167	somatic	0	0.0113938935218895	0.0244492202451027
17	21071024	21165306	2	neutral	AA	100	somatic	0	0.0071501070379463	0.0376684140246172
17	21289678	21303720	4	gain	AABB	0.263253	germline	1	4.60297538920166e-06	1.66664565981467e-06
17	21855370	21857376	6	gain	-	-1	germline	1	0.0832832123186478	0.270069470865088
17	21857376	21859382	4	gain	-	-1	germline	1	0.0832915774102317	0.270083998028969
17	21859382	21911538	3	gain	-	-1	somatic	0	6.94122527222389e-17	0
17	22126180	22158276	6	gain	AAAABB	0.688463	germline	1	1.97691894259204e-11	1.87738713464114e-13
17	26782106	26822226	3	gain	-	-1	somatic	0	5.64061763475569e-13	6.58362253602718e-14
17	26822226	26826238	4	gain	-	-1	germline	1	0.0143140303798123	0.0366441452337956
17	26826238	26842286	3	gain	-	-1	germline	1	9.82423551801803e-07	2.36228477779044e-07
17	26842286	26846298	1	loss	A	-1	germline	1	0.0340210874812816	0.0690491117231303
17	26846298	26866358	3	gain	-	-1	somatic	0	3.03133919132148e-05	3.13318042866051e-06
17	26866358	26868364	9	gain	-	-1	germline	1	0.0832773079578659	0.270059216739874
17	26868364	26878394	3	gain	-	-1	somatic	0	0.000115307856584466	0.000111983665893711
17	28561428	28826220	2	neutral	AA	74.4243	somatic	0	0.00113887999110136	0.00110140349091903
17	35504194	35752938	2	neutral	AA	100	somatic	0	0.00135720502474604	0.00265941575751594
17	51867136	52220192	2	neutral	AA	33.4993	somatic	0	8.41701089692821e-11	4.1530548666735e-08
17	57610314	57612320	0	loss	-	-1	germline	1	0.0832659922141513	0.270039563794254
17	59465864	60133862	2	neutral	AA	10.6537	somatic	0	1.00917325154926e-15	9.42801392511683e-13
17	65150868	65339432	2	neutral	AA	100	somatic	0	0.00718298355090079	0.0152270092394052
17	69102688	69275204	2	neutral	AA	77.3184	somatic	0	0.439529945096497	0.352674489278288
17	78631188	78839812	2	neutral	AA	9.18563	germline	1	0.0065366553793903	0.00747954390146699
17	82342288	82408486	2	neutral	AA	53.4005	somatic	0	0.953227760606206	0.771008090083138
17	82585014	82587020	4	gain	AABB	39.8014	germline	1	0.0832896090921601	0.270080579821448
18	5209582	5213594	1	loss	A	-1	somatic	0	0.0254621077625356	0.0625978085865903
18	11508422	11512434	1	loss	A	-1	germline	1	0.0192334222608031	0.0440911652471571
18	29594518	29596524	0	loss	-	-1	germline	1	0.0832689440272061	0.270044690548981
18	34984640	34986646	1	loss	A	-1	somatic	0	0.1099269358521	0.313644021515823
18	41283480	41289498	1	loss	A	-1	germline	1	0.0202414631254824	0.0470225407655633
18	41347672	41349678	1	loss	A	-1	germline	1	0.083310770486161	0.270117327207201
18	44077838	44079844	1	loss	A	-1	germline	1	0.0870392826164803	0.276532221768634
18	44543230	44545236	1	loss	A	-1	germline	1	0.0880816994945099	0.278306315560641
18	47849118	47851124	1	loss	A	-1	somatic	0	0.102047631494049	0.301267010953062
18	48392744	48406786	1	loss	A	-1	germline	1	2.06835883084901e-05	8.20770802822945e-06
18	49439876	49441882	1	loss	A	-1	germline	1	0.0836939028620494	0.270781972746284
18	50168054	50172066	1	loss	A	-1	germline	1	0.0217860129888371	0.0561856317577296
18	50805962	50858118	2	neutral	AA	9.76198	somatic	0	0.0215463684693942	0.0170315253823163
18	51449888	51451894	1	loss	A	-1	germline	1	0.101806882880567	0.300882716560549
18	52003544	52037646	2	neutral	AA	36.3851	germline	1	0.071166766054503	0.152845003035427
18	52791902	52797920	2	neutral	AA	79.811	germline	1	0.044029520652902	0.167031937139979
18	53678554	53684572	1	loss	A	-1	germline	1	0.00745514757531596	0.00961320479759087
18	55620362	55622368	1	loss	A	-1	somatic	0	0.091705249614435	0.284400253963987
18	56683542	56711626	2	neutral	AA	27.2849	somatic	0	0.253457431169567	0.0978024999637596
18	57237198	57279324	2	neutral	AA	54.5678	somatic	0	0.162911185106759	0.50375050703978
18	57279324	57281330	0	loss	-	-1	germline	1	0.08326550025355	0.270038709342041
18	59688530	59694548	2	neutral	AA	36.3786	somatic	0	0.744958835498498	0.601413638521549
18	64071640	64075652	2	neutral	AA	100	somatic	0	0.596239373420361	0.770318023638947
18	64434726	64476852	2	neutral	AA	36.3786	somatic	0	0.549337836505873	0.432389367708488
18	65032514	65048562	2	neutral	AA	54.5678	somatic	0	0.177583072477148	0.239386221521425
18	65269222	65351468	2	neutral	AA	94.3016	somatic	0	0.194826997395723	0.305284564711304
18	66055574	66065604	1	loss	A	-1	germline	1	0.00037117535039514	0.000275539606972131
18	66240126	66244138	1	loss	A	-1	germline	1	0.0201316848958539	0.0453486774119913
18	67708518	67740614	2	neutral	AA	36.3879	somatic	0	0.620826608716614	0.51732044123689
18	69923142	69955238	2	neutral	AA	36.3786	somatic	0	0.764828655598509	0.770331939431752
18	72336360	72340372	2	neutral	AA	100	somatic	0	0.233052828616756	0.316310477067889
18	74615176	74617182	3	gain	-	-1	germline	1	0.0833132313959927	0.27012160039587
18	74859908	74910058	2	neutral	AA	54.6533	somatic	0	0.283343492046218	0.470639892570574
19	1939802	1997976	2	neutral	AA	11.8413	somatic	0	0.0195381422110228	0.106058133034182
19	7450284	7452290	12	gain	AAAAAAAABBBB	6.00004	germline	1	0.0832738639040029	0.270053235298078
19	8852478	8922688	2	neutral	AA	0.583233	somatic	0	0.655500028354359	0.624696136389324
19	13293762	13365978	2	neutral	AA	13.865	somatic	0	0.0017608212929918	0.00483926943837487
19	16340876	16368960	2	neutral	AA	18.1893	somatic	0	0.297749281398158	0.105819265385308
19	18106156	18296726	2	neutral	AA	7.86018	somatic	0	0.0702857544080425	0.16022979897428
19	18391008	18802238	2	neutral	AA	5.38599	somatic	0	0.0550244295590043	0.0863561897011969
19	24330774	24386942	4	gain	AABB	0.191265	germline	1	4.99000327951136e-20	0
19	24386942	24404996	4	gain	AABB	0.945729	germline	1	2.21340812053559e-05	1.23070234998579e-05
19	24415026	24417032	2	neutral	AA	100	germline	1	0.0969665709694231	0.293081613876738
19	27337768	27339774	5	gain	AAABB	4.25553	germline	1	0.0832886249472541	0.270078870729529
19	27345792	27379894	6	gain	AAAABB	0.131523	germline	1	1.97631026891229e-11	1.87516668859189e-13
19	27379894	27381900	2	neutral	AA	28.8088	somatic	0	0.0995181242964139	0.297218003956063
19	27381900	27399954	6	gain	AAAABB	0.789081	germline	1	2.03871987113606e-07	3.05102959563541e-08
19	27470164	27472170	0	loss	-	-1	germline	1	0.0832669761424178	0.270041272704602
19	29512272	29514278	0	loss	-	-1	germline	1	0.0832689440272061	0.270044690548981
19	33032802	33090976	2	neutral	AA	49.9306	germline	1	0.000133154459642615	0.00218285675735386
19	46938394	47018634	2	neutral	AA	21.8273	somatic	0	0.000306511437134637	0.000985287039182769
19	51076772	51136952	2	neutral	AA	32.4574	somatic	0	0.752016018061618	0.826702499986602
19	55215150	55287366	2	neutral	AA	65.3643	somatic	0	0.735739591850868	0.670063741166673
19	56091772	56139916	2	neutral	AA	5.55272	somatic	0	0.0869158529980427	0.022694591643116
20	60180	66198	7	gain	-	-1	germline	1	0.0143110796422667	0.0366394688614529
20	66198	68204	3	gain	-	-1	germline	1	0.0833083096352113	0.270113054067872
20	1408212	1410218	0	loss	-	-1	somatic	0	0.083268452052477	0.270043836084926
20	15907580	15967760	2	neutral	AA	21.8271	somatic	0	0.00267893161866656	0.00952437813138662
20	17973760	18023910	2	neutral	AA	14.7484	germline	1	0.00217851181905134	0.00145322404830961
20	28774064	28788106	6	gain	-	-1	germline	1	0.00053245518076489	0.00067143922496693
20	28804154	28832238	9	gain	-	-1	germline	1	9.23062226458311e-09	5.58824431173832e-10
20	28870352	28872358	8	gain	-	-1	germline	1	0.0832792760404496	0.270062634750034
20	29263528	29265534	11	gain	-	-1	germline	1	0.0832753399129586	0.270055798761292
20	29265534	29375864	3	gain	-	-1	somatic	0	1.3153573073425e-14	1.84297022087776e-14
20	29407960	29411972	6	gain	-	-1	germline	1	0.0143119337479495	0.036640170284016
20	29700836	29702842	4	gain	-	-1	somatic	0	0.0832925615833974	0.270085707144572
20	29889400	29891406	3	gain	-	-1	germline	1	0.0833132313959927	0.27012160039587
20	29891406	29893412	7	gain	-	-1	germline	1	0.0832807521271127	0.270065198278378
20	30461110	30463116	4	gain	-	-1	somatic	0	0.0832940378608085	0.270088270832778
20	30938538	30942550	5	gain	-	-1	germline	1	0.0143123996427286	0.0366415731643881
20	31165216	31167222	7	gain	-	-1	germline	1	0.0832812441607101	0.270066052791772
20	31167222	31183270	3	gain	-	-1	germline	1	1.54884175263653e-06	8.90861370561602e-07
20	31183270	31189288	13	gain	-	-1	germline	1	0.00270067998117043	0.00495928412629132
20	31225396	31227402	5	gain	AAAAA	8.16452	germline	1	0.0832886249472541	0.270078870729529
20	31227402	31229408	2	neutral	AA	9.60468	germline	1	0.180847853341893	0.411964342613053
20	31229408	31231414	5	gain	AAAAA	13.9401	germline	1	0.0832886249472541	0.270078870729529
20	31231414	31245456	3	gain	AAA	3.74102	germline	1	2.27939192706648e-05	1.35760651227557e-05
20	36693752	36830160	2	neutral	AA	41.9076	somatic	0	3.1046823757641e-09	1.38961508966418e-09
20	48352624	48450918	2	neutral	AA	38.3691	germline	1	0.274058474894471	0.353170428203101
20	48597356	48737776	2	neutral	AA	5.89364	somatic	0	6.12410897155867e-10	1.96545742792154e-07
20	49931346	50027634	2	neutral	AA	86.9028	somatic	0	3.11776349847339e-08	3.98507584709051e-08
20	51600338	51686596	2	neutral	AA	64.0735	germline	1	0.0835629491675111	0.237628680914492
20	56266294	56284348	2	neutral	AA	13.6441	somatic	0	0.434615340104869	0.298039191122671
20	59750716	59776794	2	neutral	AA	21.8271	somatic	0	0.0223791846653717	0.0997079739748653
20	60665452	60703566	2	neutral	AA	77.281	somatic	0	0.424145182018743	0.701044312591718
20	64087688	64089694	4	gain	AAAB	41.2222	germline	1	0.0832930536735128	0.270086561705334
21	7919688	7925706	5	gain	-	-1	somatic	0	0.00270151466873746	0.00495947401136665
21	8988886	8996910	9	gain	AAAAABBBB	0.496235	germline	1	0.000532296589567946	0.000671207893164549
21	10653866	10661890	7	gain	AAAAABB	3.46528	germline	1	0.000532375879663659	0.000671259293773652
21	10661890	10667908	5	gain	AAAAB	100	germline	1	0.00270176936610621	0.00495985380151098
21	10667908	10669914	7	gain	AAAAAAA	17.8059	germline	1	0.0832807521271127	0.270065198278378
21	10669914	10691980	5	gain	AAAAA	2.81144	germline	1	4.33105411941876e-08	4.12981127073664e-09
21	10691980	10693986	66	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBB	85.2297	germline	1	0.0832674681100829	0.270042127162736
21	10693986	10695992	4	gain	AAAB	20.0824	germline	1	0.0832930536735128	0.270086561705334
21	10695992	10697998	5	gain	AAAAA	56.1624	germline	1	0.0832841964117458	0.270071179913588
21	10697998	10704016	4	gain	AAAB	4.94382	germline	1	0.00270203823713285	0.00496013866161471
21	10704016	10708028	8	gain	AAAAAAAA	1.87311	germline	1	0.0143104585027388	0.0366394688614529
21	10708028	10712040	4	gain	AAAA	2.47244	germline	1	0.0143146516560981	0.0366450805709264
21	10712040	10722070	5	gain	AAABB	3.26713	germline	1	0.000107622479943587	9.08672435256941e-05
21	10722070	10730094	4	gain	AAAB	7.98342	germline	1	0.000532572785416845	0.000671430655789562
21	10730094	10732100	7	gain	AAAAAAA	25.4375	germline	1	0.0832817361966623	0.270066907307141
21	10732100	10738118	5	gain	AAAAA	2.3148	germline	1	0.00270181181780084	0.00495990127715351
21	10752160	10756172	12	gain	AAAAAAAABBBB	1.69964	germline	1	0.0143088281246237	0.0366357281395301
21	13935682	13937688	2	neutral	AA	36.3795	germline	1	0.867236683416797	0.92459878485213
21	20286678	20288684	1	loss	A	-1	germline	1	0.0833575378428622	0.27019852622948
21	20585572	20589584	1	loss	A	-1	germline	1	0.0189459263755942	0.0508452058018649
21	26725938	26822226	2	neutral	AA	14.0876	somatic	0	0.0628131963043732	0.0382160129001314
21	31911448	31979652	2	neutral	AA	24.1518	germline	1	0.999598633004961	0.823316528889205
21	32029802	32031808	3	gain	AAB	4.99191	somatic	0	0.083318645604892	0.270131001584627
21	39237360	39305564	2	neutral	AA	46.2602	somatic	0	2.25825410249611e-05	0.000124182621584201
21	41474050	41476056	0	loss	-	-1	germline	1	0.083290593246486	0.270082288921262
21	41929412	41933424	1	loss	A	-1	somatic	0	0.02139688114514	0.0568284519350835
21	42613458	42649566	2	neutral	AA	18.7765	somatic	0	0.659987252053968	0.795225517827749
21	43279450	43281456	1	loss	A	-1	somatic	0	0.0867988725581462	0.276122111052476
21	44471014	44517152	2	neutral	AA	82.0155	somatic	0	0.147426569457585	0.324673903407202
21	45339612	45381738	2	neutral	AA	16.5113	somatic	0	0.0114924114755667	0.124522890214381
21	45550242	45556260	1	loss	A	-1	somatic	0	0.00887981044429404	0.0126120278129236
22	11213540	11219558	3	gain	-	-1	germline	1	0.0385377785373145	0.115121833754999
22	11626776	11630788	4	gain	AABB	40.9257	germline	1	0.0143153506203519	0.0366464836157885
22	12691962	12693968	17	gain	AAAAAAAAAAAAAAAAA	100	germline	1	0.083271895925028	0.270049817374755
22	20595602	20599614	0	loss	-	-1	germline	1	0.0143119337479495	0.0366485882712072
22	23610620	23734992	2	neutral	AA	58.6301	somatic	0	0.703126144756318	0.3159906711865
22	27464146	27514296	2	neutral	AA	18.1911	germline	1	0.359839446322317	0.557503659837053
22	29119096	29121102	3	gain	AAB	100	germline	1	0.0833122470249941	0.270119891114482
22	32950556	32956574	2	neutral	AA	36.3786	somatic	0	0.704650595665403	0.900522817700339
22	35253444	35307606	2	neutral	AA	25.5609	somatic	0	0.737264905553662	0.373418551216674
22	36747914	36751926	1	loss	A	-1	germline	1	0.0161130076255561	0.0420728767201783
22	36964562	37030760	2	neutral	AA	33.5834	somatic	0	0.107544622751886	0.151809339183065
22	42789986	42844148	2	neutral	AA	34.0797	somatic	0	0.0029583371350747	0.0174286096272188
22	46188150	46212222	2	neutral	AA	21.8271	germline	1	0.0302988963504566	0.0160584199588293
22	50336558	50340570	1	loss	A	-1	somatic	0	0.0176177841052338	0.0443661218250105
X	26084018	26088030	0	loss	-	-1	somatic	0	0.0143861792742187	0.0368704015442516
X	29355804	29357810	4	gain	-	-1	somatic	0	0.0833024038331651	0.270102798734797
X	49138976	49142988	2	gain	AB	1.47647	somatic	0	0.0354742946931886	0.0687844112578113
X	78268102	78270108	5	gain	AAAAB	89.6205	germline	1	0.0832846884618272	0.270072034440798
Y	10623776	10625782	2	gain	AB	2.54461	germline	1	0.102296087673713	0.301672001580696
Y	10655872	10657878	10	gain	-	-1	germline	1	0.083276815943107	0.270058362242268
Y	10659884	10758178	3	gain	-	-1	germline	1	4.44081176170751e-07	1.20250268964561e-07
Y	10758178	10764196	6	gain	-	-1	germline	1	0.00270154296736161	0.00495966390310631
Y	10764196	10782250	3	gain	-	-1	germline	1	1.98042473848938e-05	3.7527457002362e-05
Y	10784256	10786262	6	gain	-	-1	germline	1	0.0832837043640194	0.270070325388351
Y	10786262	10788268	2	gain	-	-1	germline	1	0.45100428019	0.681843178078393
Y	10788268	10790274	6	gain	-	-1	germline	1	0.0832837043640194	0.270070325388351
Y	10790274	10794286	2	gain	-	-1	germline	1	0.397754904534921	0.699660094247356
Y	10794286	10802310	5	gain	-	-1	germline	1	0.000532556374012483	0.00067159348769108
Y	10802310	10844436	2	gain	-	-1	somatic	0	0.742681673739957	0.0669425227145042
Y	10844436	10846442	5	gain	-	-1	germline	1	0.0832886249472541	0.270078870729529
Y	10846442	10922670	2	gain	-	-1	somatic	0	0.121332391452602	9.81771836496836e-05
Y	10924676	10926682	6	gain	-	-1	germline	1	0.0832837043640194	0.270070325388351
Y	10926682	10934706	2	gain	-	-1	germline	1	0.596033267047294	0.727228386684443
Y	10934706	10938718	4	gain	-	-1	germline	1	0.0143150399658557	0.0366478867076506
Y	10938718	10986862	2	gain	-	-1	germline	1	0.0125087881328793	6.39730871752064e-05
Y	10986862	10988868	18	gain	-	-1	germline	1	0.083271895925028	0.270049817374755
Y	10988868	10998898	2	gain	-	-1	germline	1	0.0197088560571835	0.00710803600953269
Y	10998898	11000904	11	gain	-	-1	germline	1	0.0832738639040029	0.270053235298078
Y	11002910	11004916	4	gain	-	-1	germline	1	0.0833019116983032	0.270101944136536
Y	11004916	11010934	2	gain	-	-1	germline	1	0.02334047982065	0.064916608989063
Y	11012940	11014946	21	gain	-	-1	germline	1	0.083271403936171	0.270048962898859
Y	11014946	11041024	2	gain	AA	3.30687	germline	1	0.262606686904325	0.135010712916775
Y	11291774	11305816	33	gain	AAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBB	14.1503	germline	1	4.59438277391074e-06	1.66348465868715e-06
Y	11305816	11323870	9	gain	AAAAAABBB	0.398333	germline	1	2.21091656805697e-05	1.22980738798129e-05
Y	11331894	11333900	24	gain	AAAAAAAAAAAAAAAAAAAAABBB	41.0656	germline	1	0.083270419965521	0.270047253952986
Y	11686956	11690968	8	gain	AAAAABBB	100	germline	1	0.0143113902209489	0.036642508444078
Y	11717046	11719052	5	gain	AAAAB	40.6627	germline	1	0.0832891170185296	0.270079725274502
Y	11721058	11725070	25	gain	AAAAAAAAAAAAAAAAABBBBBBBB	77.6675	germline	1	0.0143077412969117	0.0366345592324576
Y	11725070	11745130	2	gain	AA	4.99045	germline	1	0.452700410379257	0.0748481024755978
Y	11745130	11747136	3	gain	AAB	2.2633	germline	1	0.0834511363512715	0.270360977714272
Y	11747136	11749142	15	gain	AAAAAAAAABBBBBB	35.0676	germline	1	0.0832723879162396	0.270050671852626
Y	26637674	26639680	6	gain	AAAABB	12.1832	germline	1	0.0832832123186478	0.270069470865088
Y	26639680	26641686	4	gain	AABB	15.1212	germline	1	0.0832999431824073	0.270098525763229
Y	26641686	26655728	2	gain	AA	6.74406	germline	1	0.693875711783341	0.868912871555398
Y	56821956	56852046	14	gain	AAAAAAAAABBBBB	0.747191	somatic	0	1.97590572783147e-09	7.56416040914587e-11
