chr	start	end	copy number	status	genotype	uncertainty	somatic/germline	precentageOfGermline	WilcoxonRankSumTestPvalue	KolmogorovSmirnovPvalue
1	819805	1042125	2	neutral	AA	5.0941	germline	1	0.474151245701897	0.947014605191113
1	3156944	3190292	2	neutral	AA	4.79575	somatic	0	0.15662542145073	0.568000686181978
1	5669160	5677497	3	gain	AAB	3.85226	somatic	0	0.00270388610320391	0.0049645148636881
1	16610083	16632315	8	gain	AAAAABBB	7.10625	germline	1	0.000532181668892613	0.000671091463556928
1	16721243	16724022	5	gain	AAABB	14.7151	germline	1	0.0832802029916369	0.270064079503844
1	16882425	16943563	3	gain	AAB	0.883633	germline	1	4.35060331567654e-08	4.15323497815479e-09
1	18005141	18088511	2	neutral	AA	78.193	germline	1	0.00199854870123999	0.0332411589293248
1	20597948	20667423	2	neutral	AA	18.776	somatic	0	0.496007648821358	0.678648284522902
1	23810472	23907737	2	neutral	AA	60.5366	somatic	0	1.75713092582893e-06	1.01598010502357e-05
1	24794238	24852597	2	neutral	AA	80.825	germline	1	0.0937739175333175	0.138039572145181
1	30018758	30104907	2	neutral	AA	40.5132	somatic	0	0.000333993919421587	0.000900515076006858
1	53765313	53832009	2	neutral	AA	15.7346	somatic	0	0.558404967966857	0.522730294462586
1	55441050	55502188	2	neutral	AA	54.5678	somatic	0	0.820886257608511	0.824674749188161
1	75347027	75583242	2	neutral	AA	38.8257	somatic	0	0.0552297479054509	0.0961197188428313
1	105048979	105115675	2	neutral	AA	28.3519	somatic	0	0.771772714277295	0.702923115484671
1	119836038	119891618	2	neutral	AA	36.3807	somatic	0	0.78532127300539	0.979395348831604
1	125080011	125082790	9	gain	-	-1	germline	1	0.083271336349884	0.270048680430784
1	125082790	125085569	4	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
1	125149486	125163381	3	gain	-	-1	germline	1	0.000683039027016933	0.00332788011127694
1	125163381	125166160	5	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
1	143543687	143724322	1	loss	A	-1	germline	1	3.57150155786761e-31	0
1	155437807	155849099	2	neutral	AA	100	somatic	0	3.66778405387144e-06	1.38107116322006e-05
1	202113891	202127786	2	neutral	AA	54.6717	somatic	0	0.237218444449699	0.379653265205024
1	212184987	212226672	2	neutral	AA	54.8284	somatic	0	0.787356986017032	0.77796863205846
1	212932538	212999234	2	neutral	AA	27.3285	somatic	0	0.422997812527705	0.203612456014476
1	224012411	224015190	8	gain	AAAAAAAA	2.08573	germline	1	0.0832733824301043	0.270052234006139
1	228066972	228072530	1	loss	A	-1	germline	1	0.0143180416766074	0.0366599030033247
1	231582407	231624092	2	neutral	AA	100	somatic	0	0.973293144048191	0.93175932594461
1	234775478	234781036	6	gain	AAAABB	3.12047	germline	1	0.0143097523988208	0.0366381823919499
1	236095503	236098282	6	gain	AAABBB	42.9948	germline	1	0.0832781567756628	0.270060525814709
2	694750	919849	2	neutral	AA	14.695	somatic	0	0.00295993737066379	0.0205628511797892
2	3179176	3181955	5	gain	AAAAA	5.30384	germline	1	0.0832808850726787	0.270065264074474
2	3181955	3270883	2	neutral	AA	6.9166	somatic	0	0.083351062835756	0.156491107135504
2	4165721	4176837	1	loss	A	-1	germline	1	0.00124052984125734	0.00164022141033582
2	16129316	16134874	1	loss	A	-1	somatic	0	0.0205475407746714	0.0556006131628682
2	23715986	23760450	2	neutral	AA	54.5679	somatic	0	0.085799359270366	0.196098272955311
2	36827308	37110766	2	neutral	AA	100	somatic	0	0.0556392877886805	0.0858782405722323
2	48624163	48632500	1	loss	A	-1	germline	1	0.00538103626509373	0.0096621480996586
2	52523100	52559227	1	loss	A	-1	germline	1	2.6422620373558e-08	1.06061615046116e-09
2	63658553	63669669	2	neutral	AA	100	somatic	0	0.0364100054680272	0.100399833852452
2	68516245	68521803	1	loss	A	-1	somatic	0	0.02255316484906	0.0623265675152065
2	89772816	89789490	5	gain	-	-1	germline	1	2.21136060885313e-05	1.22975594931685e-05
2	89789490	89795048	3	gain	-	-1	germline	1	0.0221715738861615	0.0610805942471216
2	89795048	89806164	4	gain	AABB	30.4994	germline	1	0.000532416646987814	0.000671269586181023
2	89811722	89814501	6	gain	AAAAAA	3.89771	germline	1	0.0832788388431289	0.270061710373961
2	89814501	89817280	3	gain	AAA	15.6193	germline	1	0.083301349608276	0.27010080295699
2	89817280	89825617	5	gain	AAAAA	60.7127	germline	1	0.00270133527891537	0.00495957688563553
2	89825617	89842291	30	gain	AAAAAAAAAAAAAAAAAAAABBBBBBBBBB	83.7296	germline	1	2.20923445192643e-05	1.22897292764712e-05
2	89842291	89850628	4	gain	AABB	26.8202	germline	1	0.00270141373301686	0.00495957688563553
2	91412426	91415205	5	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
2	97665176	97704082	2	neutral	AA	54.5678	somatic	0	0.906412491523333	0.86941120669076
2	108422685	108800629	2	neutral	AA	68.6722	somatic	0	0.000652244594511009	0.000533101405411074
2	109198026	109200805	15	gain	AAAAAAAAAAAAAAB	50.5518	germline	1	0.0832658803350615	0.270039204396715
2	115439660	115478566	2	neutral	AA	100	somatic	0	0.0417607035964036	0.150256513688049
2	117040364	117045922	1	loss	A	-1	germline	1	0.0144699309343852	0.037119301134624
2	126916930	126919709	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
2	132241494	132247052	3	gain	AAB	1.11452	somatic	0	0.0143270893556199	0.0366829326620016
2	135114980	135117759	4	gain	AAAA	21.0788	germline	1	0.0832808850726787	0.270065264074474
2	153517518	153528634	1	loss	A	-1	germline	1	0.00134218157326293	0.00144353934625141
2	164700214	164869733	2	neutral	AA	15.7967	somatic	0	0.867401253310236	0.298059408927143
2	169463420	169468978	1	loss	A	-1	germline	1	0.0205518281158651	0.0559534707168859
2	176399804	176408141	1	loss	A	-1	somatic	0	0.00557517515268602	0.00943873247111671
2	185275930	185373195	2	neutral	AA	37.2648	somatic	0	0.2350271874731	0.690976385337251
2	188107731	188168869	2	neutral	AA	55.4235	somatic	0	0.444461904378703	0.377937083810067
2	197353464	197545215	2	neutral	AA	61.2859	somatic	0	1.28800710816134e-05	1.47855306352751e-05
2	208558392	208591740	2	neutral	AA	27.2879	somatic	0	0.441977342426002	0.2892839801717
2	215200202	215269677	2	neutral	AA	12.189	somatic	0	0.481043337934303	0.575575114327638
2	219004653	219038001	2	neutral	AA	29.1225	somatic	0	0.208020557001611	0.305222234749905
2	234611517	234753246	2	neutral	AA	100	somatic	0	0.0853753657104579	0.0213346056617295
2	241589586	241592365	4	gain	AAAA	5.8916	somatic	0	0.0832877061319903	0.270077109989374
3	1158843	1164401	2	neutral	AA	36.3786	somatic	0	0.865282026477317	0.745079265698958
3	11071536	11135453	2	neutral	AA	54.5678	somatic	0	0.00807271856283065	0.0109060009028316
3	15626317	15662444	2	neutral	AA	100	somatic	0	0.138776404022817	0.30202198022751
3	15737477	15809731	2	neutral	AA	18.471	somatic	0	0.637899221136764	0.623068166117946
3	32058544	32066881	1	loss	A	-1	somatic	0	0.00743825859119031	0.0113369366476156
3	39695236	39742479	2	neutral	AA	54.5678	somatic	0	0.919394267796083	0.936403017011216
3	43180102	43263472	2	neutral	AA	30.3444	somatic	0	0.00299418145630402	0.0233206907078577
3	46753896	46806697	1	loss	A	-1	germline	1	4.74516613973982e-08	5.61277546662353e-09
3	46942868	46951205	2	neutral	AA	100	somatic	0	0.415377575896113	0.468020400655127
3	47448646	47454204	1	loss	A	-1	somatic	0	0.0225231238182788	0.0622316532325802
3	48079479	48157291	2	neutral	AA	27.9214	somatic	0	0.000121135118285757	0.001755190676345
3	58367337	58395127	2	neutral	AA	100	somatic	0	0.0745365988656866	0.203529764557885
3	58942590	59012065	2	neutral	AA	54.5678	somatic	0	0.15976965597002	0.186889753661425
3	68588499	68591278	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
3	72523563	72559690	2	neutral	AA	15.6381	somatic	0	0.859434629309004	0.746670489902227
3	74919061	75146939	2	neutral	AA	11.2051	germline	1	0.0956524953699747	0.156741908235697
3	75669391	75672170	6	gain	AAAAAA	1.82797	germline	1	0.0832781567756628	0.270060525814709
3	75724971	75769435	2	neutral	AA	0.819105	germline	1	0.110758585029296	0.227380905543885
3	76730969	76797665	2	neutral	AA	18.222	germline	1	0.622309139632748	0.806750685058893
3	90289710	93794029	2	neutral	AA	1.26109	somatic	0	0.135664289718669	0.451883021816715
3	93988559	94063592	2	neutral	AA	22.0338	somatic	0	0.0132693466132796	0.0230339927777076
3	96648062	96773117	2	neutral	AA	29.6534	somatic	0	0.267874957157245	0.475869523011934
3	98604478	98685069	2	neutral	AA	68.0207	somatic	0	0.200656301900909	0.294202033484925
3	98685069	98687848	2	neutral	AA	-1	somatic	0	NA	NA
3	98687848	98696185	1	loss	A	-1	germline	1	0.00276472809885522	0.00514048143375878
3	98696185	98760102	2	neutral	AA	70.3236	somatic	0	0.319230345914369	0.220066571131804
3	99179731	99185289	1	loss	A	-1	germline	1	0.0206123775473975	0.0561479864599657
3	99185289	99224195	2	neutral	AA	36.3801	germline	1	0.0572291316949247	0.143453465998407
3	99224195	99232532	1	loss	A	-1	germline	1	0.0209324825606946	0.0571598098443314
3	101672494	101772538	2	neutral	AA	15.9912	somatic	0	0.157104296551478	0.0761294528003854
3	107563974	107875222	2	neutral	AA	26.8797	somatic	0	0.00163909359397775	0.00441329327539741
3	110115096	110117875	3	gain	AAA	100	somatic	0	0.0832877061319903	0.270077109989374
3	113158101	113174775	3	gain	AAB	11.1585	germline	1	2.21551067375311e-05	1.23364549932115e-05
3	115712002	115717560	2	neutral	AA	100	somatic	0	0.114182561158111	0.251674647082686
3	133414232	133419790	1	loss	A	-1	somatic	0	0.0217076079089895	0.0595981245490281
3	138091289	138255250	2	neutral	AA	60.4663	somatic	0	0.472058318633452	0.225542858359593
3	138863851	138886083	2	neutral	AA	36.3789	somatic	0	0.000725596698349967	0.00217043092925806
3	146670062	146672841	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
3	163046709	163052267	0	loss	-	-1	germline	1	0.0143137350297694	0.0366540665086809
3	175588336	175605010	2	neutral	AA	54.571	somatic	0	0.947720505445272	0.938075735270852
3	183086078	183094415	2	neutral	AA	36.3786	germline	1	0.2775143884094	0.424111755453635
3	185670548	185742802	2	neutral	AA	92.0076	somatic	0	0.0861623253487213	0.169536773404543
3	193157174	193168290	1	loss	A	-1	germline	1	0.00138891638161248	0.00154055890991533
3	197384033	197389591	3	gain	AAB	1.32728	somatic	0	0.014336357679927	0.0367105200263896
4	125055	133392	1	loss	A	-1	somatic	0	0.0206513948744563	0.0562734398771002
4	705866	1497881	2	neutral	AA	3.88598	somatic	0	0.29199040587519	0.155218236475347
4	10029411	10046085	2	neutral	AA	27.298	somatic	0	0.144772559596463	0.257234364958677
4	15242815	15320627	2	neutral	AA	27.2839	somatic	0	0.0619718297700285	0.0953088846477036
4	25108265	25325027	2	neutral	AA	100	somatic	0	0.540718660044503	0.595022476706354
4	31813992	31819550	0	loss	-	-1	germline	1	0.0143743482936996	0.0368366788860039
4	40292721	40295500	4	gain	AABB	44.0362	germline	1	0.0832877061319903	0.270077109989374
4	48763113	48882610	2	neutral	AA	27.2839	somatic	0	0.86665011974764	0.923625328969281
4	49146615	49152173	80	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBBBBBBBBBBB	100	germline	1	0.0143060935457571	0.0366313767571964
4	49652393	49657951	27	gain	AAAAAAAAAAAAAAAAAABBBBBBBBB	94.4833	germline	1	0.0143062011473022	0.036631700809959
4	61071304	61076862	1	loss	A	-1	germline	1	0.0207321553334913	0.0565288469105576
4	62802621	62810958	1	loss	A	-1	somatic	0	0.0051730748891253	0.00955475280710316
4	63269493	63288946	1	loss	A	-1	germline	1	1.35085509817572e-05	5.98431845433289e-06
4	63828072	63850304	1	loss	A	-1	germline	1	1.73873791636426e-05	7.08832998363995e-06
4	69266575	69366619	1	loss	A	-1	somatic	0	5.21095591879498e-06	4.68594828784141e-06
4	74560570	74563349	0	loss	-	-1	germline	1	0.0832788388431289	0.270061710373954
4	102831337	102881359	2	neutral	AA	44.9513	somatic	0	0.382043740255471	0.260856661126896
4	106135568	106143905	1	loss	A	-1	somatic	0	0.00548816761891032	0.0103490892997231
4	120030568	120377943	2	neutral	AA	22.8068	somatic	0	0.209200556846995	0.0771214526204357
4	126775201	126811328	2	neutral	AA	36.3798	somatic	0	0.504557528947017	0.786669572341419
4	134511937	134514716	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
4	159197794	159422893	2	neutral	AA	100	somatic	0	0.163256130661276	0.177703390632422
4	165080937	165086495	1	loss	A	-1	germline	1	0.0208613755655209	0.0569375753178943
4	172503646	172506425	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
4	185520482	185523261	0	loss	-	-1	germline	1	0.0832665623210772	0.270040388887692
5	45369954	45375512	1	loss	A	-1	germline	1	0.0206346228926794	0.056212327617148
5	46273129	46275908	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
5	46403742	46409300	1	loss	A	-1	germline	1	0.0208344281148629	0.0568497436248943
5	49599592	49602371	225	gain	-	-1	germline	1	0.0832651983535707	0.270038019909523
5	84651119	84659456	0	loss	-	-1	germline	1	0.0143886717241449	0.0368800112614412
5	91204001	91206780	0	loss	-	-1	germline	1	0.0832733824301043	0.270052234006131
5	137516036	137521594	1	loss	A	-1	germline	1	0.0209291775677085	0.0571331214727917
5	140431207	140545146	2	neutral	AA	27.2191	somatic	0	0.0369540768089265	0.0502106037456418
5	142718324	142746114	2	neutral	AA	36.3786	somatic	0	0.261448478718658	0.594719489880026
5	148167943	148173501	2	neutral	AA	100	somatic	0	0.457398463228926	0.376251086590325
5	148173501	148179059	1	loss	A	-1	somatic	0	0.0523334505242655	0.162009619498481
5	148179059	148242976	2	neutral	AA	58.5738	somatic	0	0.281061075811578	0.567713840268784
5	149012759	149043328	2	neutral	AA	65.438	somatic	0	0.0817934259919155	0.15666984243921
5	156049187	156060303	1	loss	A	-1	germline	1	0.00136462942349393	0.00156965816677013
5	157402560	157774946	2	neutral	AA	14.5813	germline	1	0.364999970835026	0.233512629123955
5	157838863	158150111	2	neutral	AA	27.1091	somatic	0	0.941866279768747	0.280183276786286
5	167256894	167273568	2	neutral	AA	61.6906	somatic	0	0.930494613944553	0.960129690795767
5	171517101	171564344	2	neutral	AA	29.662	somatic	0	0.773844167430422	0.621834256632908
5	176385909	176402583	2	neutral	AA	54.5678	somatic	0	0.0637422105798893	0.316723285928043
5	177069543	177200156	2	neutral	AA	100	somatic	0	0.000300251838409766	3.69593318969574e-05
5	177564205	177583658	2	neutral	AA	36.3786	somatic	0	0.32047118151039	0.359533432114392
5	178584098	178586877	5	gain	AAAAA	3.36581	germline	1	0.0832802029916369	0.270064079503844
5	178920357	178925915	1	loss	A	-1	somatic	0	0.0221294359042185	0.0537386589790452
5	180629442	180671127	2	neutral	AA	4.82059	somatic	0	0.282573749589245	0.685314770817683
5	180949027	181001828	1	loss	A	-1	germline	1	1.35332980637008e-12	3.21964677141295e-15
5	181107430	181121325	2	neutral	AA	54.5678	somatic	0	0.441989916087464	0.548734252254157
6	255668	383502	3	gain	AAB	0.398577	germline	1	6.95085330725071e-30	0
6	814247	878164	2	neutral	AA	31.1381	somatic	0	0.751513475469915	0.361656698201317
6	14945462	14989926	2	neutral	AA	36.3804	somatic	0	0.00772829188647105	0.0149699441674253
6	17104745	17115861	2	neutral	AA	100	somatic	0	0.127432128015326	0.461923202426125
6	24399620	24530233	2	neutral	AA	21.8271	somatic	0	0.541972611440918	0.397308747785549
6	27084134	27895602	2	neutral	AA	7.6652	somatic	0	6.69053440551736e-16	3.33066907387547e-16
6	32486510	32528195	0	loss	-	-1	germline	1	2.03758763967804e-07	3.06857018683715e-08
6	32555985	32578217	1	loss	A	-1	germline	1	0.0388125171083268	0.0434392880834058
6	32583775	32592112	0	loss	-	-1	germline	1	0.0144225032660573	0.0369808578995962
6	35785183	35799078	3	gain	AAB	5.27517	germline	1	0.000111983259785309	0.000102309539290135
6	36399342	36588314	2	neutral	AA	15.2768	germline	1	2.28842389811342e-08	4.0052598127005e-07
6	38675343	38755934	2	neutral	AA	70.4852	somatic	0	0.0594914976533253	0.0769508333958617
6	46273129	46298140	2	neutral	AA	100	somatic	0	0.28991576898741	0.652042596889053
6	54062666	54071003	1	loss	A	-1	germline	1	0.0146969577668458	0.0377973496227936
6	55705055	55743961	2	neutral	AA	100	somatic	0	0.890342236670548	0.933353334420861
6	60232046	60237604	3	gain	-	-1	germline	1	0.0143212724117929	0.0366566604059264
6	60237604	60240383	5	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
6	66298603	66340288	1	loss	A	-1	germline	1	1.12748241948007e-10	5.01332308999736e-12
6	69827933	69941872	2	neutral	AA	100	somatic	0	0.0726447347586251	0.246492212160859
6	73882494	73893610	1	loss	A	-1	germline	1	0.00155891871739144	0.00162562209790929
6	78812440	78817998	1	loss	A	-1	somatic	0	0.0204278850038742	0.0476576931951372
6	81366341	81496954	2	neutral	AA	5.32633	germline	1	0.319928820119849	0.779582587408548
6	88969685	88975243	2	neutral	AA	100	somatic	0	0.778945766840376	0.989792338505947
6	101486301	101491859	1	loss	A	-1	somatic	0	0.0260726044529201	0.0555303648155349
6	111098862	111576850	2	neutral	AA	100	somatic	0	0.783099537234334	0.360550377926326
6	116009355	116098283	2	neutral	AA	54.5678	germline	1	0.0819277506900913	0.155095008356856
6	116226117	116303929	2	neutral	AA	27.284	somatic	0	0.0238384912955162	0.113943325219501
6	119241332	119327481	2	neutral	AA	100	somatic	0	0.614732206828168	0.809864242460723
6	132386002	132391560	1	loss	A	-1	germline	1	0.0194610749318793	0.0456152517558113
6	135459576	135487366	2	neutral	AA	100	somatic	0	0.16424069739914	0.132974902039623
6	137049164	137124197	2	neutral	AA	47.8425	somatic	0	0.381221436090405	0.356066160205338
6	150949722	150960838	2	neutral	AA	100	germline	1	0.476513135116953	0.663247301829071
6	157308074	157310853	8	gain	AAAAABBB	8.85238	germline	1	0.0832727003988392	0.270051049477228
6	157313632	157316411	5	gain	AAABB	3.95479	germline	1	0.0832802029916369	0.270064079503844
6	163043930	163124521	2	neutral	AA	18.1893	somatic	0	0.835194338731844	0.473942858116111
6	167948865	167990550	2	neutral	AA	33.4408	somatic	0	0.0634285501653063	0.149292645726028
7	903175	908733	4	gain	-	-1	germline	1	0.0143121203318242	0.0366420718227657
7	9762627	9765406	0	loss	-	-1	germline	1	0.0832679263066831	0.270042757881039
7	16132095	16134874	0	loss	-	-1	germline	1	0.0832679263066831	0.270042757881039
7	51525439	51530997	1	loss	A	-1	somatic	0	0.0231609310456302	0.0568620805023162
7	57408582	57419698	1	loss	A	-1	germline	1	0.00159765170595657	0.00167404618870892
7	57486394	57497510	3	gain	-	-1	germline	1	0.000533175299943732	0.000672398725809153
7	61046293	61057409	3	gain	-	-1	germline	1	0.000533630975096333	0.000674280607471656
7	61096315	61960584	2	neutral	AA	2.37254	germline	1	0.96771606003423	0.970088510604316
7	61960584	62357981	3	gain	AAB	0.456262	somatic	0	4.88979426629672e-10	2.65182653613749e-09
7	62402445	62405224	4	gain	-	-1	germline	1	0.0832822492483382	0.270067633227112
7	62438572	62455246	2	neutral	AA	7.91593	somatic	0	0.000206726881974699	0.000625158961864103
7	62519163	62538616	2	neutral	AA	100	germline	1	0.0989149800213876	0.303927643470408
7	62541395	62544174	0	loss	-	-1	germline	1	0.0832720183720991	0.270049864952102
7	62544174	62574743	2	neutral	AA	4.05586	germline	1	0.801900890034082	0.977872675267929
7	63997591	64000370	2	neutral	AA	100	somatic	0	0.225948539939642	0.466010592925057
7	65225909	65228688	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
7	65487135	65489914	3	gain	AAB	4.37505	somatic	0	0.0832917989847988	0.270084217720364
7	69622287	69636182	2	neutral	AA	54.5686	somatic	0	0.761234344036731	0.945422513857366
7	70958986	70961765	0	loss	-	-1	germline	1	0.0832720183720991	0.270049864952102
7	74299344	74313239	2	neutral	AA	54.5678	germline	1	0.0048558527181695	0.00696638712077635
7	74413283	74418841	1	loss	A	-1	germline	1	0.0206485739757494	0.0562598021944207
7	81043977	81063430	2	neutral	AA	36.3786	somatic	0	0.273982053507399	0.223617292111343
7	83153238	83161575	2	neutral	AA	54.5775	somatic	0	0.632437718609188	0.530966529410569
7	85868321	85884995	2	neutral	AA	46.2892	somatic	0	0.356963369191518	0.712312682284225
7	88441675	88450012	2	neutral	AA	19.3549	somatic	0	0.599187321028045	0.760531717814322
7	96912067	96917625	1	loss	A	-1	germline	1	0.0203268426180954	0.0552445793179924
7	97767999	97773557	1	loss	A	-1	germline	1	0.0239015607028764	0.0558202235089373
7	99729973	99830017	2	neutral	AA	27.2847	somatic	0	0.00696007289210616	0.0770527547823044
7	100949954	100955512	3	gain	AAB	1.21293	germline	1	0.0143171802558107	0.0366514727720323
7	100955512	100961070	9	gain	AAAAABBBB	3.11741	germline	1	0.0143074924215295	0.0366342933223562
7	100961070	100972186	3	gain	AAB	0.726676	germline	1	0.000532663098795906	0.000671661611981955
7	101125031	101150042	2	neutral	AA	24.9505	somatic	0	0.0824209910074405	0.240521393205616
7	103770639	103798429	2	neutral	AA	36.3786	germline	1	0.175113462398806	0.229373150259508
7	107058196	107152682	2	neutral	AA	100	somatic	0	0.823427776243292	0.207158997930697
7	109801069	109814964	1	loss	A	-1	germline	1	0.000230913819432006	0.000263606349367618
7	125721960	125746971	2	neutral	AA	54.8448	somatic	0	0.473163584378156	0.545868983401968
7	128895578	128912252	2	neutral	AA	54.5678	somatic	0	0.992718837962941	0.856520868434613
7	143326925	143357494	2	neutral	AA	36.398	somatic	0	0.795161639041964	0.877616441309425
7	143846598	143849377	4	gain	AABB	47.6779	germline	1	0.0832815671582458	0.270066448648897
7	147089691	147123039	2	neutral	AA	54.5678	somatic	0	0.886068463405713	0.9824352153125
7	151358235	151363793	2	neutral	AA	100	somatic	0	0.978013664269681	0.995455677522219
7	152400360	152403139	5	gain	AAAAB	5.13143	germline	1	0.0832808850726787	0.270065264074474
7	152403139	152408697	7	gain	AAAAABB	1.20164	germline	1	0.0143094295256436	0.0366375341886002
7	152414255	152464277	2	neutral	AA	6.20343	somatic	0	0.00698032230841342	0.00354983466592218
7	152464277	152467056	1	loss	A	-1	somatic	0	0.123811166738412	0.33459031259876
7	153461938	153484170	2	neutral	AA	100	germline	1	0.945620656435413	0.941057261779466
7	154598549	154609665	1	loss	A	-1	germline	1	0.020503087169315	0.053706573632729
7	155346100	155348879	1	loss	A	-1	germline	1	0.0834187582523225	0.270304625106699
7	155348879	155351658	2	neutral	AA	10.2616	somatic	0	0.0975599076870151	0.294040575625108
7	157591532	157602648	2	neutral	AA	12.3574	somatic	0	0.887613938796326	0.979407879066825
7	158091752	158133437	2	neutral	AA	22.9316	somatic	0	0.728530184344722	0.35091283085357
7	158150111	158152890	4	gain	AAAB	15.7028	germline	1	0.0832856597666802	0.27007355617508
7	158244597	158586414	2	neutral	AA	7.88315	somatic	0	0.0054836284393477	0.0243078211100262
7	158594751	158597530	5	gain	AAABB	7.52944	germline	1	0.0832808850726787	0.270065264074474
7	158875430	158989369	2	neutral	AA	100	somatic	0	0.330071963633626	0.599036493286337
7	159203352	159206131	4	gain	AABB	61.9775	germline	1	0.0832842955457673	0.270071186984515
8	530789	547463	2	neutral	AA	36.3786	somatic	0	0.0985497405196631	0.22584774192336
8	5735856	5746972	1	loss	A	-1	germline	1	0.000965181154242494	0.00164419174599795
8	6111021	6116579	1	loss	A	-1	germline	1	0.0159592650288412	0.0416432636521761
8	6875246	6914152	2	neutral	AA	8.96251	somatic	0	0.119555228158215	0.0968854153534808
8	13492045	13497603	2	neutral	AA	100	somatic	0	0.236225808994015	0.612538167229456
8	21765128	21806813	2	neutral	AA	36.3786	somatic	0	0.0386188558843762	0.0376627219722585
8	25113823	25133276	1	loss	A	-1	germline	1	1.19839764202543e-05	7.54292060034523e-06
8	25208309	25213867	0	loss	-	-1	germline	1	0.0143085685619217	0.0366355896387512
8	25466756	25500104	2	neutral	AA	49.9719	somatic	0	0.768049326250878	0.905749053124989
8	32831106	32833885	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
8	34014960	36535513	2	neutral	AA	13.2672	somatic	0	0.0022854142000333	0.00230340009744789
8	42332507	42338065	0	loss	-	-1	germline	1	0.0144778126564976	0.0371488155511476
8	42435330	42490910	2	neutral	AA	100	somatic	0	0.0193641274937183	0.0252505126192166
8	43202334	43235682	2	neutral	AA	54.5678	germline	1	0.158031333639111	0.156226323497767
8	43235682	43241240	4	gain	AABB	39.896	germline	1	0.0143166418910283	0.0366550392013294
8	43241240	43260693	2	neutral	AA	9.99127	somatic	0	0.67078175895472	0.952653454394741
8	53298441	53362358	2	neutral	AA	100	somatic	0	0.807088687047204	0.880726382546035
8	55507746	55599453	2	neutral	AA	36.5402	somatic	0	0.0753867789006972	0.0646143017201084
8	55821773	55913480	2	neutral	AA	18.5695	germline	1	0.000596532643339268	0.00095029420633419
8	63989254	64117088	2	neutral	AA	100	somatic	0	0.0737933520472218	0.169438803797293
8	80010189	80062990	2	neutral	AA	54.5678	somatic	0	0.639949190230061	0.655251604771567
8	87607975	87663555	2	neutral	AA	54.5678	somatic	0	0.951718076187533	0.956630262580422
8	94697204	94783353	2	neutral	AA	100	somatic	0	0.00239374671001199	0.00332516988190557
8	96056135	96164516	2	neutral	AA	33.4801	somatic	0	0.441304561930616	0.605646134514465
8	96309024	97137166	2	neutral	AA	48.2862	germline	1	0.000270744336265949	0.00241645985475614
8	103809545	103995738	2	neutral	AA	100	somatic	0	0.551793549643553	0.615812587104104
8	111282276	111285055	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
8	114064055	114075171	2	neutral	AA	54.5679	somatic	0	0.478534220961229	0.68855786500287
8	114622634	114630971	1	loss	A	-1	germline	1	0.00458967222728487	0.00929932671482214
8	120564136	120608600	2	neutral	AA	36.3786	somatic	0	0.367977105829911	0.446653647242066
8	121367267	121408952	2	neutral	AA	27.288	somatic	0	0.620015992023378	0.778751490098192
8	142357054	142448761	2	neutral	AA	10.3259	somatic	0	0.000531118461703533	0.0036898593137441
8	143618720	143632615	1	loss	A	-1	germline	1	0.000254290614293364	0.000212698530177247
8	144124498	144127277	6	gain	AAAABB	17.084	germline	1	0.0832788388431289	0.270061710373961
9	15412334	15434566	3	gain	-	-1	germline	1	9.7055664256456e-07	2.27761813409444e-07
9	22496005	22501563	1	loss	A	-1	germline	1	0.0215595686358947	0.0561198277965766
9	24502443	24519117	1	loss	A	-1	germline	1	8.16785086794227e-05	3.75737431590473e-05
9	29090572	29098909	1	loss	A	-1	germline	1	0.0207405743793907	0.0563407293303413
9	40912438	40929112	7	gain	-	-1	germline	1	0.00270062928568477	0.00495845823670715
9	69122067	69130404	1	loss	A	-1	germline	1	0.020255489357112	0.0541149678571801
9	69944651	70519904	2	neutral	AA	50.0542	somatic	0	0.707704304282558	0.262651127796337
9	88641763	88714017	2	neutral	AA	12.568	somatic	0	0.466462616033951	0.567389599519855
9	96164516	96236770	2	neutral	AA	27.2839	somatic	0	0.562349592873786	0.228454682848018
9	101953173	101961510	1	loss	A	-1	germline	1	0.00533050015269649	0.00870471525776895
9	103011972	103017530	1	loss	A	-1	somatic	0	0.0210766906620792	0.0573947470186922
9	110262383	110267941	1	loss	A	-1	germline	1	0.0166669745333596	0.0433000233231525
9	123912831	123921168	1	loss	A	-1	germline	1	0.00643811171621601	0.00941096031149968
9	124424167	124438062	2	neutral	AA	36.3786	somatic	0	0.215553447799624	0.145225755309737
9	127778420	127834000	2	neutral	AA	24.4092	somatic	0	0.0442063721008136	0.0843286492627796
9	128531529	128717722	2	neutral	AA	100	somatic	0	0.000675731437877266	0.0138400130075074
9	128931705	128981727	2	neutral	AA	32.5021	somatic	0	0.0754120755027439	0.0664243675939181
9	129051202	129162362	2	neutral	AA	79.6062	somatic	0	0.591431683058764	0.43760837462147
9	129426367	129440262	3	gain	AAB	0.462939	germline	1	0.000108327529241831	9.20988342768547e-05
9	130954817	130965933	2	neutral	AA	6.55022	somatic	0	0.0798741903380886	0.190271727174138
9	135253930	135256709	3	gain	AAB	54.5099	germline	1	0.0833327364742743	0.270155302539953
9	135256709	135417891	3	gain	AAB	0.399349	germline	1	5.95923827260835e-39	0
10	20561821	20567379	1	loss	A	-1	somatic	0	0.0165155734298481	0.0417586558980557
10	26625599	26628378	4	gain	-	-1	somatic	0	0.0832877061319903	0.270077109989374
10	26936847	26939626	4	gain	-	-1	germline	1	0.0832849776539611	0.270072371577901
10	38486371	38491929	3	gain	-	-1	germline	1	0.0143137350297694	0.0366433683799806
10	38525277	38528056	10	gain	-	-1	germline	1	0.0832679263066831	0.270042757881046
10	38575299	38578078	3	gain	-	-1	germline	1	0.0835048519378123	0.270454007894293
10	38578078	38580857	5	gain	-	-1	germline	1	0.0832802029916369	0.270064079503844
10	39559065	39561844	0	loss	-	-1	germline	1	0.0832706543321939	0.270047495913244
10	41821171	41843403	2	neutral	AA	27.0386	somatic	0	0.845763569316628	0.989764946115346
10	41857298	41882309	24	gain	AAAAAAAAAAAAAAAABBBBBBBB	2.75834	germline	1	0.000532030121409374	0.0006709608684623
10	41882309	41898983	42	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6.39306	germline	1	0.00269986464994867	0.00495760295535574
10	42299159	42321391	3	gain	AAB	1.95967	germline	1	1.06128485724446e-06	2.67971789869037e-07
10	44461221	44502906	2	neutral	AA	31.9687	somatic	0	0.158995488508719	0.275053776193464
10	46514902	46559366	4	gain	AABB	0.44103	germline	1	9.15450981728759e-11	1.38666855775682e-12
10	49544012	49555128	2	neutral	AA	100	germline	1	0.570041008197134	0.630765551345448
10	50219309	50235983	2	neutral	AA	83.2954	somatic	0	0.135097759446726	0.14807378370025
10	52873254	52881591	2	neutral	AA	54.5678	somatic	0	0.0694631226320095	0.138217429169522
10	56219170	56233065	2	neutral	AA	36.6103	somatic	0	0.251177775816887	0.620959983917968
10	59526180	59551191	2	neutral	AA	54.5678	somatic	0	0.0574460203761902	0.0789116209727708
10	66315277	66356962	1	loss	A	-1	germline	1	2.1783773254479e-08	1.04983632898126e-09
10	67632523	67724230	2	neutral	AA	54.5681	somatic	0	0.652953318061467	0.663446510385043
10	67724230	67732567	1	loss	A	-1	germline	1	0.00746646087569547	0.0104305439387526
10	67732567	67779810	2	neutral	AA	54.5678	somatic	0	0.342007685999711	0.341394003593491
10	70494893	70511567	2	neutral	AA	46.8499	somatic	0	0.414984247439277	0.413304792836213
10	73007109	73146059	2	neutral	AA	100	somatic	0	0.100390355212181	0.121697999807648
10	76494754	76503091	1	loss	A	-1	germline	1	0.0205439932200851	0.0559225891549087
10	79932377	79937935	2	neutral	AA	54.5678	somatic	0	0.457137786603842	0.831188228645504
10	85990597	86004492	2	neutral	AA	36.3786	somatic	0	0.0624398683842356	0.0526623813786432
10	91851508	91884856	2	neutral	AA	54.568	somatic	0	0.468759608023922	0.58027669120931
10	92051596	92182209	2	neutral	AA	50.9239	somatic	0	0.344574356581531	0.153838452666982
10	92621291	92626849	2	neutral	AA	100	somatic	0	0.583311556006459	0.58546982936666
10	93157638	93193765	2	neutral	AA	100	germline	1	0.429822163083059	0.422585085151561
10	96873161	96903730	2	neutral	AA	36.3847	somatic	0	0.617625510095698	0.910890307906921
10	98501655	98579467	2	neutral	AA	46.6865	somatic	0	0.978263389858706	0.784497882768483
10	98668395	98690627	2	neutral	AA	54.5704	somatic	0	0.0347658250780538	0.189187642461562
10	103212060	103378800	2	neutral	AA	19.0361	somatic	0	2.99945422694712e-10	4.19366574799795e-09
10	106332877	106341214	2	neutral	AA	54.5678	somatic	0	0.112154618714378	0.161309242700701
10	108647784	108670016	2	neutral	AA	28.6694	germline	1	0.251832019232313	0.334898144007207
10	110415228	110423565	2	neutral	AA	13.8376	somatic	0	0.233540187546157	0.427492694493777
10	114230795	114239132	2	neutral	AA	100	somatic	0	0.339001849987807	0.719275339594288
10	114517032	114672656	2	neutral	AA	24.7968	somatic	0	0.870984761036837	0.9123866460176
10	120133391	120200087	2	neutral	AA	67.1862	somatic	0	0.137976900585108	0.466401097993033
10	120466871	120469650	0	loss	-	-1	germline	1	0.0832686083062734	0.270043942383401
10	121606261	121617377	2	neutral	AA	17.5089	germline	1	0.564201646733439	0.646136877905293
10	124032328	124040665	2	neutral	AA	13.9985	germline	1	0.6291103353284	0.728663105667909
10	128965053	129042865	2	neutral	AA	56.3301	somatic	0	0.559960588212183	0.255244051455218
10	129226279	129234616	2	neutral	AA	54.5678	germline	1	0.159947564873858	0.212574439223558
10	130257288	130273962	2	neutral	AA	100	germline	1	0.489950631446218	0.479001361092634
10	130465713	130554641	2	neutral	AA	46.9013	somatic	0	0.067287602812747	0.289653889889262
10	133536508	133622657	2	neutral	AA	16.1641	somatic	0	0.751314439708244	0.870509909742655
11	28984970	28987749	0	loss	-	-1	germline	1	0.0832706543321939	0.270047495913244
11	36349320	36352099	1	loss	A	-1	somatic	0	0.0869169020109404	0.276323347547796
11	40195456	40548389	2	neutral	AA	15.0224	somatic	0	0.287752654792464	0.373249665495994
11	48788124	48790903	1	loss	A	-1	somatic	0	0.0875212177198354	0.277353357539663
11	48790903	48935411	2	neutral	AA	0.965542	somatic	0	0.878882566277481	0.905353287983254
11	50174845	50177624	1	loss	A	-1	somatic	0	0.0851974138909011	0.273377820880578
11	50733424	50738982	1	loss	A	-1	somatic	0	0.0229722785133826	0.0582148537387766
11	54924156	54935272	1	loss	A	-1	germline	1	0.00104532810613152	0.00160569161555035
11	55185382	55215951	1	loss	A	-1	somatic	0	0.000239740607105399	0.000222437462889635
11	62841527	62849864	3	gain	AAB	30.598	somatic	0	0.0027496306932527	0.00509638366266041
11	64514485	64564507	2	neutral	AA	14.489	somatic	0	0.605344412279127	0.775042168456743
11	65873416	65876195	1	loss	A	-1	germline	1	0.0875599209810376	0.277418580292594
11	65876195	66031819	2	neutral	AA	100	somatic	0	0.0273882001462407	0.0193836630993144
11	71917741	72203978	2	neutral	AA	52.8254	somatic	0	0.260910766037949	0.112448653107949
11	73248882	73254440	1	loss	A	-1	somatic	0	0.0293079231368275	0.0566001799736824
11	76847687	77056112	2	neutral	AA	100	somatic	0	0.5364785328091	0.822879771658764
11	81788749	81808202	1	loss	A	-1	germline	1	1.48152552280575e-05	7.917736574381e-06
11	88638984	88647321	1	loss	A	-1	germline	1	0.00599094445761836	0.00856868459075644
11	93655079	93677311	2	neutral	AA	54.5678	somatic	0	0.508887337275891	0.678710095461619
11	96564692	96567471	1	loss	A	-1	germline	1	0.0833914419628339	0.270257214593192
11	104118014	104120793	1	loss	A	-1	somatic	0	0.0899510426314866	0.281462112528577
11	104395914	104404251	1	loss	A	-1	germline	1	0.0207473564853848	0.0564882546824393
11	114600402	114603181	1	loss	A	-1	somatic	0	0.0950015466025466	0.289858066897518
11	122017553	122020332	1	loss	A	-1	somatic	0	0.0955877307958101	0.290820342654265
11	123448738	123573793	2	neutral	AA	9.41998	somatic	0	0.086096514123194	0.249987631052065
11	131341098	131343877	4	gain	AABB	13.4808	germline	1	0.0832822492483382	0.270067633227112
11	132052522	132060859	3	gain	AAB	19.5949	somatic	0	0.00277174789641612	0.0051876709791232
12	2231537	2253769	2	neutral	AA	100	somatic	0	0.343896076631387	0.696437398583764
12	2253769	2256548	5	gain	AAABB	11.1909	germline	1	0.0832802029916369	0.270064079503844
12	2256548	2301012	2	neutral	AA	36.3786	somatic	0	0.000175377731533128	8.37010426332219e-05
12	3034668	3043005	2	neutral	AA	54.5678	somatic	0	0.63032156958321	0.896776410672349
12	6589009	6630694	2	neutral	AA	37.0573	somatic	0	0.158220459280097	0.138196823031419
12	8639911	8734397	2	neutral	AA	18.2234	somatic	0	0.068087737936528	0.0769668175426627
12	14670341	14675899	2	neutral	AA	54.5679	somatic	0	0.270388730267944	0.432273960718105
12	18660985	18855515	2	neutral	AA	15.6813	somatic	0	0.947425529294513	0.104217429536718
12	32469836	32478173	2	neutral	AA	100	somatic	0	0.801991500531827	0.97022921087947
12	34676362	34681920	2	neutral	AA	6.75529	somatic	0	0.0475844730361545	0.0955224235621273
12	37616544	37624881	1	loss	A	-1	germline	1	0.00400814683017646	0.00944761155529339
12	37827748	37830527	5	gain	AAAAB	24.0566	germline	1	0.0832808850726787	0.270065264074474
12	37830527	37833306	6	gain	AAAABB	25.6122	germline	1	0.0832781567756628	0.270060525814709
12	38189018	38200134	2	neutral	AA	15.5908	somatic	0	0.14153609783216	0.0888097205312994
12	38919895	38983812	2	neutral	AA	36.4221	somatic	0	0.619676764629502	0.541312534461848
12	42749357	42832727	2	neutral	AA	59.4084	somatic	0	0.568131372338554	0.261441217904343
12	48524119	48557467	2	neutral	AA	27.2839	somatic	0	0.0531527854604326	0.124401492312391
12	50097033	50127602	2	neutral	AA	54.5678	somatic	0	0.700056119220932	0.812805103231451
12	50127602	50147055	2	neutral	AA	54.5728	somatic	0	0.0813697520741801	0.111777473711013
12	51011324	51030777	2	neutral	AA	36.3786	somatic	0	0.0847433522185551	0.0715451582591948
12	52631481	52667608	2	neutral	AA	51.7679	somatic	0	0.313714504975008	0.313893305396634
12	56013524	56032977	2	neutral	AA	54.5678	somatic	0	0.271460761725393	0.645862338952143
12	56472059	56566545	2	neutral	AA	100	somatic	0	0.0251858079493207	0.0375532115140595
12	57169588	57430814	2	neutral	AA	29.8993	somatic	0	0.0889772850303633	0.119353015730518
12	59534517	59542854	2	neutral	AA	7.6203	somatic	0	0.887260949881467	0.916973209498549
12	59542854	59553970	1	loss	A	-1	germline	1	0.00166889251282095	0.00158564395675187
12	71962205	71964984	1	loss	A	-1	somatic	0	0.0833156772067679	0.270125682205763
12	86301845	86310182	1	loss	A	-1	somatic	0	0.00545656515966984	0.00950104527199713
12	89497695	89533822	2	neutral	AA	54.5678	somatic	0	0.119310191391514	0.189890366704491
12	90092401	90097959	1	loss	A	-1	germline	1	0.0197306952176876	0.0533610124646394
12	99399272	99410388	1	loss	A	-1	somatic	0	0.00146509470526956	0.00165075545899829
12	100435839	100446955	2	neutral	AA	100	somatic	0	0.099864605371835	0.285468364204069
12	107366665	107388897	2	neutral	AA	36.3786	somatic	0	0.219952995460102	0.314050759329296
12	108128111	108333757	2	neutral	AA	16.7241	somatic	0	3.36293122389176e-06	6.7322444889939e-05
12	113786155	113811166	2	neutral	AA	36.3786	somatic	0	0.315786908974481	0.12510548043066
12	114758805	114819943	2	neutral	AA	18.1907	somatic	0	0.000538953602629671	0.000857036885393625
12	120250109	120297352	2	neutral	AA	100	somatic	0	0.00213377271362554	0.0023113689990103
12	121350593	121372825	2	neutral	AA	27.2839	somatic	0	0.023869337388592	0.0127665469293474
12	122326022	122467751	2	neutral	AA	58.5693	somatic	0	2.61133139994309e-09	1.5759926697001e-10
12	123518213	123568235	2	neutral	AA	35.1371	somatic	0	0.00252780630120511	0.018694538052809
12	126508417	126522312	1	loss	A	-1	germline	1	0.000299989306360297	0.000259590792672015
12	131902456	131938583	2	neutral	AA	10.1952	somatic	0	0.737830329029907	0.807585557311919
12	132155345	132158124	0	loss	-	-1	somatic	0	0.0832822492483382	0.270067633227104
13	22018017	22023575	1	loss	A	-1	germline	1	0.0185220579016904	0.0495735943437123
13	23057363	23062921	1	loss	A	-1	germline	1	0.0162630705524528	0.0423957254370062
13	37497047	37510942	1	loss	A	-1	germline	1	0.000346851691852447	0.000267222413282586
13	45422755	45425534	1	loss	A	-1	germline	1	0.0837765860382607	0.270925076082561
13	50494430	50502767	1	loss	A	-1	germline	1	0.0060424889820901	0.00954470655841744
13	63027720	63044394	3	gain	-	-1	germline	1	0.0001077419851857	9.09656746417298e-05
13	63055510	63063847	3	gain	-	-1	germline	1	0.00270330706932882	0.00496260497802892
13	63063847	63066626	5	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
13	63066626	63069405	3	gain	-	-1	germline	1	0.0833416084114764	0.270170706050566
13	71903846	71906625	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
13	72317917	72323475	1	loss	A	-1	germline	1	0.0238532986978306	0.0565713539966241
13	84703920	84709478	1	loss	A	-1	somatic	0	0.0247315065714795	0.0562941369611707
13	87908107	87922002	2	neutral	AA	100	somatic	0	0.511572211106921	0.402887831652255
13	90234130	90314721	2	neutral	AA	100	somatic	0	0.985299011955089	0.795090211392157
13	94794469	94802806	2	neutral	AA	54.5678	somatic	0	0.226190552829868	0.692665940182188
13	98601699	98607257	0	loss	-	-1	germline	1	0.0143651663008977	0.0368090085958869
13	99538222	99546559	2	neutral	AA	54.5678	somatic	0	0.147381062490701	0.38246960019953
13	101077788	101097241	2	neutral	AA	100	somatic	0	0.716649172445075	0.954993833687274
13	101997637	102025427	2	neutral	AA	54.5678	somatic	0	0.707707135707578	0.836343434258256
13	105693707	105724276	2	neutral	AA	100	somatic	0	0.922440494397917	0.843488181162286
13	109464810	109478705	2	neutral	AA	22.2527	somatic	0	0.0286763493921502	0.0458883330758113
13	113113637	113116416	2	neutral	AA	100	somatic	0	0.192770534307887	0.426746516669859
14	0	18488687	3	gain	AAB	-1	somatic	0	0.325526219097979	0.570731351896403
14	18491466	18658206	3	gain	AAB	-1	somatic	0	NA	NA
14	18658206	18660985	5	gain	AAAAB	33.1415	germline	1	0.0832808850726787	0.270065264074474
14	18660985	18680438	3	gain	AAB	-1	somatic	0	NA	NA
14	18694333	19728121	3	gain	AAB	-1	somatic	0	NA	NA
14	19728121	19955999	3	gain	AAB	0.441217	germline	1	2.93450956504971e-27	0
14	19955999	19958778	2	neutral	AA	100	somatic	0	0.135618642403016	0.351670300772978
14	25344480	25394502	2	neutral	AA	36.3786	somatic	0	0.0382860253435953	0.194907572198468
14	34348440	34351219	0	loss	-	-1	germline	1	0.0832795209151203	0.270062894936998
14	37299738	37302517	1	loss	A	-1	germline	1	0.0833354662196214	0.270160042013401
14	37663787	37669345	1	loss	A	-1	germline	1	0.0288536269563767	0.0563873548484112
14	49018781	49024339	1	loss	A	-1	germline	1	0.0198971759349193	0.0518591826707496
14	52528658	52531437	1	loss	A	-1	somatic	0	0.105579739235881	0.306862300466913
14	59748500	59751279	1	loss	A	-1	germline	1	0.0836799940728754	0.270757701273382
14	60432134	60434913	1	loss	A	-1	somatic	0	0.0846382331240418	0.272414579108914
14	63394548	63397327	1	loss	A	-1	somatic	0	0.102233484878869	0.301563247569483
14	65425997	65437113	2	neutral	AA	54.5683	somatic	0	0.530758483184557	0.633407162744145
14	79257080	79426599	2	neutral	AA	100	somatic	0	0.363812193935632	0.482512264345836
14	79640582	79648919	1	loss	A	-1	germline	1	0.00606222984353452	0.00906880737134408
14	92796368	92807484	2	neutral	AA	54.5678	somatic	0	0.609133751646143	0.775222892279945
14	99418725	99421504	3	gain	AAA	89.6259	somatic	0	0.0832958920005287	0.270091325587892
14	99927282	99930061	4	gain	AABB	100	somatic	0	0.0832877061319903	0.270077109989374
14	100166276	100169055	1	loss	A	-1	somatic	0	0.0892152698204606	0.280222713833161
15	0	17079734	9	gain	AAAAAABBB	-1	germline	1	NA	NA
15	17079734	17082513	15	gain	-	-1	germline	1	0.0832658803350615	0.270039204396715
15	17082513	20339501	9	gain	AAAAAABBB	-1	germline	1	0.477921024039921	0.87854296194423
15	20339501	20342280	24	gain	AAAAAAAAAAAAAAAABBBBBBBB	100	germline	1	0.0832651983535707	0.270038019909523
15	20342280	20358954	9	gain	AAAAAAABB	7.12662	germline	1	2.20992755008472e-05	1.2292338817721e-05
15	20358954	20378407	9	gain	AAAAAABBB	-1	germline	1	NA	NA
15	20378407	20381186	5	gain	AAAAB	8.8445	germline	1	0.0832808850726787	0.270065264074474
15	20381186	20389523	9	gain	AAAAAABBB	-1	germline	1	NA	NA
15	20389523	20672981	9	gain	AAAAAABBB	0.793792	germline	1	4.24255143007535e-10	1.02290398373839e-11
15	20672981	22220884	9	gain	AAAAAABBB	-1	germline	1	NA	NA
15	22220884	22270906	4	gain	AAAB	1.393	germline	1	9.6505479402003e-07	2.25365214379103e-07
15	23410296	23463097	2	neutral	AA	7.75192	somatic	0	0.241445853513686	0.344568430214756
15	27306454	27309233	0	loss	-	-1	germline	1	0.0832679263066831	0.270042757881039
15	34898682	34915356	2	neutral	AA	100	somatic	0	0.242900216174566	0.352343904041369
15	35988050	36477154	2	neutral	AA	56.9574	germline	1	3.85776602957692e-08	1.599120098561e-07
15	42585396	42607628	2	neutral	AA	36.3786	somatic	0	0.989411011332136	0.926162558037387
15	43480234	43752576	2	neutral	AA	76.7634	somatic	0	0.257107025131842	0.420095864350048
15	47990551	48215650	2	neutral	AA	54.5678	germline	1	0.000638652731566346	0.00136860101256797
15	49166068	49174405	2	neutral	AA	100	somatic	0	0.371690184820163	0.395623015197684
15	50889048	51002987	2	neutral	AA	32.7224	somatic	0	0.147491261721217	0.180298239172544
15	52787105	52795442	2	neutral	AA	54.5678	somatic	0	0.321793118380527	0.481840991728579
15	53768092	53815335	2	neutral	AA	27.2968	somatic	0	0.0687776237223767	0.0631971420040859
15	56658252	56836108	2	neutral	AA	100	somatic	0	0.372484710528075	0.635155944145384
15	56850003	56911141	2	neutral	AA	54.5678	somatic	0	0.564791651687342	0.650282526752942
15	57358560	57366897	2	neutral	AA	72.6236	somatic	0	0.155611080290245	0.333382707332678
15	57689261	57705935	2	neutral	AA	100	somatic	0	0.226136133265354	0.526178447309716
15	59656793	59692920	2	neutral	AA	36.3786	somatic	0	0.992478162394489	0.867716354647656
15	67993793	68010467	2	neutral	AA	54.5678	somatic	0	0.10036355015489	0.200426116395678
15	68332831	68357842	2	neutral	AA	93.3662	somatic	0	0.0772068427002738	0.271351959930255
15	70608832	70775572	2	neutral	AA	100	somatic	0	0.930098472073438	0.728187795844829
15	72023343	72028901	2	neutral	AA	54.5678	somatic	0	0.71013430366629	0.881930766367962
15	75938954	75947291	2	neutral	AA	54.5678	somatic	0	0.449772792815823	0.34133192751349
15	79818438	79829554	2	neutral	AA	36.3788	somatic	0	0.703668536175303	0.670616635969379
15	80702160	80707718	2	neutral	AA	54.568	somatic	0	0.386191130897153	0.785760808682738
15	88135985	88186007	2	neutral	AA	54.5678	somatic	0	0.00992924577613981	0.0374421100547963
15	88936337	88947453	2	neutral	AA	54.5679	somatic	0	0.512311470267884	0.768702563684204
15	92521247	92546258	2	neutral	AA	100	somatic	0	0.268222503644663	0.419599955079302
15	97659618	97665176	2	neutral	AA	54.5678	somatic	0	0.214415607922465	0.300302894302949
16	1022672	1028230	4	gain	AAAA	12.4037	germline	1	0.0143137350297694	0.036645961614831
16	21523355	21581714	3	gain	AAB	3.46518	germline	1	2.04473328809825e-07	3.064786391338e-08
16	22615502	22698872	3	gain	AAB	1.23185	germline	1	1.32203848942762e-20	0
16	30883027	31108126	2	neutral	AA	24.5644	somatic	0	0.00947140666077066	0.0114982024887413
16	34062203	34064982	24	gain	AAAAAAAAAAAAAAAABBBBBBBB	38.1911	germline	1	0.0832651983535707	0.270038019909523
16	34076098	34084435	2	neutral	AA	19.4485	germline	1	0.00361090507467963	0.00656500441703212
16	34084435	34087214	12	gain	AAAAAAABBBBB	94.914	germline	1	0.0832658803350615	0.270039204396715
16	34095551	34098330	11	gain	AAAAAAAABBB	20.4645	germline	1	0.0832672443116177	0.270041573382477
16	34098330	34101109	4	gain	AAAA	3.05596	germline	1	0.0832815671582458	0.270066448648897
16	34173363	34176142	5	gain	AAABB	0.910701	germline	1	0.0832802029916369	0.270064079503844
16	34192816	34212269	3	gain	AAB	1.08245	germline	1	0.000451988780172818	0.000975666183976487
16	34595771	34598550	5	gain	-	-1	germline	1	0.0832795209151203	0.270062894937006
16	34598550	34948704	2	neutral	AA	1.73406	germline	1	2.9234127132687e-12	2.00158556395991e-10
16	34948704	34954262	3	gain	AAA	1.00736	germline	1	0.0143137350297694	0.0366436925255562
16	34957041	34959820	2	neutral	AA	18.0141	germline	1	0.0854997194721385	0.273898066723121
16	36124221	36127000	4	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
16	46475996	46509344	2	neutral	AA	29.1192	somatic	0	0.246195026207069	0.350886262535465
16	58050531	58114448	2	neutral	AA	18.3879	germline	1	0.0304705388239239	0.0160053486720001
16	70150297	70161413	7	gain	AAAAABB	93.6619	germline	1	0.000532242299148074	0.000671150832840972
17	925407	939302	2	neutral	AA	27.2841	somatic	0	0.26957484678003	0.413410614152111
17	7519974	7525532	2	neutral	AA	100	somatic	0	0.166549317533196	0.336279792091323
17	9006739	9051203	2	neutral	AA	54.5678	somatic	0	0.626309285678395	0.54160635741093
17	9395799	9437484	2	neutral	AA	61.4914	somatic	0	0.118500746395845	0.0929157248312726
17	10738056	10927028	2	neutral	AA	13.7396	somatic	0	0.451880548704848	0.462706083449084
17	12149788	12197031	2	neutral	AA	18.7849	somatic	0	0.392361668980783	0.553195485628891
17	13147449	13172460	2	neutral	AA	54.5678	somatic	0	0.332283316970235	0.487730341480104
17	13308631	13350316	2	neutral	AA	90.0334	somatic	0	0.427038306365095	0.628557927220641
17	13619879	13639332	2	neutral	AA	100	somatic	0	0.714671388872246	0.857690098718477
17	14575855	14598087	2	neutral	AA	54.5678	somatic	0	0.393731055383776	0.727344789387362
17	21289919	21303814	4	gain	AABB	0.204033	germline	1	0.000107623873169307	9.08711750424729e-05
17	21859614	21884625	3	gain	-	-1	germline	1	5.60822594224528e-07	2.1314989880894e-06
17	21884625	21967995	0	loss	-	-1	germline	1	5.28864494308055e-21	0
17	21967995	21979111	20	gain	-	-1	germline	1	0.0143063087495611	0.036631700809959
17	22126398	22129177	4	gain	-	-1	germline	1	0.0832815671582458	0.270066448648897
17	22129177	22154188	6	gain	AAAABB	0.257481	germline	1	2.0369583012606e-07	3.04921092819654e-08
17	22156967	22159746	5	gain	AAABB	3.25841	germline	1	0.0832808850726787	0.270065264074474
17	26784002	26792339	3	gain	-	-1	germline	1	0.00270210029522154	0.00496030084056431
17	26809013	26820129	4	gain	-	-1	germline	1	0.00270190411832393	0.0049605641209185
17	26822908	26825687	5	gain	-	-1	germline	1	0.0832802029916369	0.270064079503844
17	26864593	26867372	8	gain	-	-1	germline	1	0.0832733824301043	0.270052234006139
17	26936847	26939626	14	gain	AAAAAAAAABBBBB	2.95479	germline	1	0.0832658803350615	0.270039204396715
17	28059563	28201292	2	neutral	AA	21.9399	somatic	0	0.886430983302036	0.730976458754217
17	29218406	29237859	2	neutral	AA	29.2307	somatic	0	0.015257214443981	0.0268936085169742
17	29354577	29532433	2	neutral	AA	37.6526	somatic	0	8.37330804164568e-11	4.63033944519964e-10
17	41143095	41193117	2	neutral	AA	26.2017	somatic	0	0.456792934709223	0.76387983183119
17	41823950	41885088	2	neutral	AA	41.8296	somatic	0	0.370460498877016	0.414550542157072
17	42485352	42518700	2	neutral	AA	100	somatic	0	0.762524688989736	0.592894813526439
17	52517542	52528658	2	neutral	AA	54.5678	somatic	0	0.873179613594204	0.94893238115697
17	61115768	61185243	2	neutral	AA	34.6964	somatic	0	0.489704910122249	0.40912911144381
17	66796044	66798823	5	gain	AAAAB	100	germline	1	0.0832808850726787	0.270065264074474
17	67988235	68027141	2	neutral	AA	13.676	somatic	0	0.00130438461189616	0.00214014579335675
17	75802783	75852805	2	neutral	AA	27.2839	germline	1	0.678294409795804	0.976209423199844
17	76508649	76536439	2	neutral	AA	17.6001	somatic	0	0.615785081383579	0.956716309596993
17	82583543	82589101	4	gain	AABB	8.9	germline	1	0.0143128738375353	0.0366417476897337
18	5293995	5296774	1	loss	A	-1	somatic	0	0.122177414218481	0.332177917599907
18	5305111	5310669	1	loss	A	-1	somatic	0	0.0283182233464935	0.0570931089893459
18	5324564	5327343	1	loss	A	-1	germline	1	0.0835711794219884	0.270569049957705
18	12027512	12044186	2	neutral	AA	100	somatic	0	0.559037846295242	0.632747745568722
18	12046965	12110882	2	neutral	AA	4.6653	somatic	0	0.297893803246292	0.481358369556521
18	13055742	13191913	2	neutral	AA	27.2846	somatic	0	0.00263378628546968	0.00358864124819169
18	21142632	21145411	1	loss	A	-1	somatic	0	0.123609289097391	0.334292937091991
18	21178759	21312151	2	neutral	AA	35.7919	somatic	0	0.00887088803331293	0.0307512608777687
18	22512679	22684977	2	neutral	AA	100	somatic	0	0.397953002588158	0.609447186661029
18	23268567	23479771	2	neutral	AA	42.265	somatic	0	0.571488388700098	0.603775171134499
18	24616382	24666404	2	neutral	AA	15.5912	somatic	0	0.113292102049867	0.0945371317719073
18	29593571	29596350	1	loss	A	-1	germline	1	0.0839377732426284	0.271204201743007
18	33409138	33467497	2	neutral	AA	99.3041	somatic	0	0.0071507886317592	0.00550048229006672
18	35796299	35860216	2	neutral	AA	15.6579	somatic	0	0.344211519676162	0.169452460364979
18	47695977	47957203	2	neutral	AA	100	somatic	0	0.0706683531252876	0.0865355471047371
18	52003427	52028438	2	neutral	AA	100	germline	1	0.141410514883662	0.0478554022455295
18	55763414	55793983	2	neutral	AA	100	somatic	0	0.672975744279453	0.606244884352336
18	56599893	56613788	2	neutral	AA	54.5678	somatic	0	0.691762221163829	0.944610636377827
18	61818855	61860540	2	neutral	AA	100	somatic	0	0.393612913892135	0.0822546276692712
18	62966582	63008267	2	neutral	AA	27.4744	somatic	0	0.959964163360525	0.884859371355273
18	63433454	63464023	2	neutral	AA	100	somatic	0	0.431008321496555	0.819486056968984
18	64039276	64067066	2	neutral	AA	54.5678	somatic	0	0.826030557306893	0.852917389596372
18	65776151	65898427	2	neutral	AA	100	somatic	0	0.0620739755891147	0.067620950553528
18	70808920	70817257	2	neutral	AA	54.5678	somatic	0	0.832994354648609	0.985921710345971
18	74616150	74618929	3	gain	-	-1	germline	1	0.0833368311194561	0.270162411772893
18	76892151	76975521	2	neutral	AA	20.2333	somatic	0	0.00679486226249906	0.0359476844993539
18	77767536	77823116	2	neutral	AA	77.8973	somatic	0	0.15341150038301	0.242867049720441
18	79198721	79201500	3	gain	AAB	15.7818	somatic	0	0.0833020318296106	0.270101987645194
18	79518306	79523864	1	loss	A	-1	somatic	0	0.0309906534011395	0.0604826579610398
18	79526643	79534980	2	neutral	AA	18.4129	somatic	0	0.461538284690585	0.630439406678698
19	1417290	1456196	2	neutral	AA	100	somatic	0	0.330895052680645	0.217331070159458
19	3590468	3598805	2	neutral	AA	36.3786	somatic	0	0.512504982904869	0.854013757092704
19	4143489	4151826	2	neutral	AA	54.5678	somatic	0	0.1089751265584	0.362096269093247
19	7447720	7450499	3	gain	AAB	5.47369	germline	1	0.0833149948949116	0.270124497441711
19	7450499	7453278	8	gain	AAAAABBB	15.1038	germline	1	0.0832733824301043	0.270052234006139
19	8881684	8917811	2	neutral	AA	2.34918	germline	1	0.124088394168355	0.304268242404932
19	9873787	9907135	2	neutral	AA	100	somatic	0	0.166225372308943	0.253331522386885
19	13817188	13858873	2	neutral	AA	36.3786	somatic	0	0.032420209165352	0.0552761006507752
19	18441444	18477571	2	neutral	AA	21.7691	somatic	0	0.678245677790675	0.720823788081274
19	19566939	19658646	2	neutral	AA	13.642	somatic	0	0.115758751215735	0.0982523149365807
19	19869850	19936546	2	neutral	AA	27.2839	somatic	0	0.951064051122122	0.849828316462135
19	21259350	21312151	2	neutral	AA	8.55947	germline	1	0.0336333153169805	0.0545345276180829
19	21317709	21565040	2	neutral	AA	1.38844	germline	1	0.00309890391906228	0.0005285803058801
19	21565040	21576156	3	gain	AAB	1.30904	germline	1	0.00270333650899488	0.00496411965966082
19	21576156	21595609	2	neutral	AA	2.44786	germline	1	0.0115910416584504	0.0971201862230305
19	23218545	23279683	2	neutral	AA	35.5373	somatic	0	0.0107279811302478	0.00178698617944806
19	24330145	24405178	4	gain	AABB	0.193043	germline	1	4.73413919554419e-18	0
19	27242537	27337023	2	neutral	AA	1.05644	germline	1	0.497513557054836	0.524313327268618
19	27337023	27342581	4	gain	AAAB	6.94329	germline	1	0.014314380953941	0.0366482308270403
19	27342581	27345360	2	neutral	AA	100	germline	1	0.735987366069954	0.867810425861438
19	27345360	27378708	6	gain	AAAABB	0.574451	germline	1	4.32726827104827e-08	4.12723322185116e-09
19	27378708	27384266	4	gain	AAAB	2.52811	germline	1	0.0143119050509054	0.0366414235592104
19	27384266	27398161	6	gain	AAAABB	1.1374	germline	1	0.000107597390463613	9.08510807807739e-05
19	27398161	27400940	3	gain	AAB	1.96505	germline	1	0.0833020318296106	0.270101987645194
19	27470415	27473194	1	loss	A	-1	germline	1	0.0833095365630051	0.270115019465761
19	27767768	27812232	2	neutral	AA	85.5505	somatic	0	0.363740017824546	0.226870044832812
19	29510201	29515759	1	loss	A	-1	germline	1	0.0196443937310928	0.0529816365271383
19	41682221	42315833	2	neutral	AA	18.2747	somatic	0	0.000391211677691473	0.00018403610000961
19	42315833	42388087	2	neutral	AA	100	somatic	0	0.937962619641004	0.813989526257822
19	44666867	44669646	1	loss	A	-1	germline	1	0.0904748907716804	0.282341947506828
19	51191959	51200296	2	neutral	AA	54.5678	somatic	0	0.0363957301356879	0.091449254588913
19	53801440	53806998	2	neutral	AA	100	somatic	0	0.168944551952345	0.287117547545362
19	55660591	55674486	2	neutral	AA	13.7632	somatic	0	0.915117455264421	0.704088982715602
19	58520182	58586878	2	neutral	AA	100	somatic	0	0.0778307067629848	0.0546708938127246
20	63917	66696	8	gain	-	-1	somatic	0	0.0832733824301043	0.270052234006139
20	21303814	21309372	1	loss	A	-1	germline	1	0.0186293269870838	0.0447094900271431
20	28782103	28787661	8	gain	-	-1	germline	1	0.0143083533281313	0.0366352655558916
20	28804335	28832125	9	gain	-	-1	germline	1	4.59504494124169e-06	1.66385575517403e-06
20	29204511	29260091	1	loss	A	-1	somatic	0	0.000127070690370522	5.06532623276712e-05
20	29262870	29265649	22	gain	-	-1	germline	1	0.0832658803350615	0.270039204396715
20	29885366	29893703	8	gain	-	-1	germline	1	0.0143084609446695	0.0366375341886002
20	30149371	30168824	1	loss	A	-1	germline	1	0.000122810534807817	4.49457730291591e-05
20	31066441	31074778	38	gain	-	-1	germline	1	0.0143060935457571	0.0366313767571964
20	31163706	31169264	4	gain	-	-1	germline	1	0.0143137350297694	0.0366469341192958
20	31183159	31188717	19	gain	-	-1	germline	1	0.0143063087495611	0.036631700809959
20	31188717	31191496	4	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
20	31191496	31241518	3	gain	-	-1	somatic	0	5.80222678080362e-06	4.09527688793876e-06
20	31241518	31244297	54	gain	-	-1	germline	1	0.0832651983535707	0.270038019909523
20	38494708	38655890	2	neutral	AA	12.8669	germline	1	0.00657757727295768	0.0190202336049828
20	38894884	38992149	2	neutral	AA	21.8299	somatic	0	0.00370991727993055	0.00605474610007639
20	41304277	41326509	2	neutral	AA	100	germline	1	0.0902328779303306	0.0673927340709382
20	41540492	41562724	2	neutral	AA	54.5678	somatic	0	0.79782503249452	0.805208359085819
20	42146314	42154651	2	neutral	AA	54.5678	somatic	0	0.753316835880312	0.679602044086062
20	43641416	43646974	1	loss	A	-1	germline	1	0.0198612704861641	0.053708380819024
20	45175424	45258794	2	neutral	AA	100	somatic	0	0.00894059570434955	0.0440144263127574
20	45525578	45533915	2	neutral	AA	54.5678	germline	1	0.841457749412296	0.998353293699689
20	47812695	47948866	2	neutral	AA	36.3786	somatic	0	0.0239470633592335	0.117911063001401
20	54907482	54965841	2	neutral	AA	27.3014	somatic	0	0.0778651175385546	0.182331007534914
20	55304879	55324332	2	neutral	AA	54.5678	somatic	0	0.59104489126331	0.894188532109118
20	59745721	59776290	2	neutral	AA	54.5678	somatic	0	0.199726314342842	0.258257938619535
21	10663023	10665802	5	gain	AAAAB	33.8465	germline	1	0.0832808850726787	0.270065264074474
21	10665802	10676918	6	gain	AAAABB	3.38178	germline	1	0.000532314305936344	0.000671186456774886
21	10676918	10690813	5	gain	AAAAB	3.16758	germline	1	0.000107598903595429	9.08490715867405e-05
21	10690813	10693592	57	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBBBBB	100	germline	1	0.0832651983535707	0.270038019909523
21	10693592	10704708	5	gain	AAAAB	2.82543	germline	1	0.000532355998225835	0.000671222082481271
21	10704708	10707487	11	gain	AAAAAAAABBB	13.7053	germline	1	0.0832658803350615	0.270039204396715
21	10707487	10715824	5	gain	AAAAB	4.88855	germline	1	0.00270113915277016	0.00495905043379608
21	10715824	10721382	7	gain	AAAAABB	1.28813	germline	1	0.0143094295256436	0.0366375341886002
21	10721382	10738056	5	gain	AAAAB	1.70476	germline	1	2.21119106116758e-05	1.22969067924972e-05
21	10751951	10754730	13	gain	AAAAAAAABBBBB	2.98628	germline	1	0.0832658803350615	0.270039204396715
21	20286700	20289479	1	loss	A	-1	somatic	0	0.083978967630853	0.271275501454435
21	20586832	20589611	1	loss	A	-1	germline	1	0.0837806983363079	0.270932200088199
21	22551585	22559922	3	gain	AAB	8.02546	germline	1	0.00270734303381887	0.00496794117354693
21	30154929	30174382	2	neutral	AA	25.2166	somatic	0	0.246065333863014	0.230663720265431
21	31163706	31177601	2	neutral	AA	54.5678	somatic	0	0.62243758353401	0.795472695063807
21	32669924	32722725	2	neutral	AA	36.3845	somatic	0	0.10395956573698	0.172721438206701
21	34762511	34787522	2	neutral	AA	100	germline	1	0.271160225358028	0.41386557950623
21	39970357	39987031	2	neutral	AA	54.5678	germline	1	0.563175138749652	0.820465480627828
21	41473796	41476575	1	loss	A	-1	somatic	0	0.0852620463122624	0.273488985423706
21	45328269	45358838	2	neutral	AA	21.0151	somatic	0	0.0801927357704575	0.0688935312765414
21	45553368	45556147	1	loss	A	-1	somatic	0	0.0845194367820731	0.272209598284929
21	45795141	45797920	3	gain	AAB	4.9638	somatic	0	0.0832877061319903	0.270077109989374
21	45967439	45970218	1	loss	A	-1	germline	1	0.0832931633052728	0.270086586994361
21	46045251	46106389	2	neutral	AA	4.77468	germline	1	0.044555596339331	0.0955970088522958
22	12691693	12694472	12	gain	AAAAAAAAAAAB	100	germline	1	0.0832658803350615	0.270039204396715
22	18730460	18733239	15	gain	AAAAAAAAAAAAAAB	14.1752	germline	1	0.0832658803350615	0.270039204396715
22	20064380	20100507	2	neutral	AA	6.20491	somatic	0	0.148768675435478	0.238727952757422
22	23718765	23727102	2	neutral	AA	54.5678	somatic	0	0.217088543575653	0.249315907320206
22	24360714	24369051	2	neutral	AA	54.5678	somatic	0	0.302614387321155	0.72969556946999
22	25739098	25752993	2	neutral	AA	54.5678	somatic	0	0.0335455710636761	0.0623972972791381
22	31180380	31352678	2	neutral	AA	24.2201	somatic	0	0.386468397424489	0.818590909808871
22	31702832	33406359	1	loss	A	-1	germline	1	0	0
22	35298858	35309974	2	neutral	AA	54.5678	somatic	0	0.958165697310047	0.918571921213369
22	36365994	36452143	2	neutral	AA	90.3031	somatic	0	0.00281061470020543	0.000507996845793501
22	36574419	36691137	2	neutral	AA	15.6954	somatic	0	0.129722749570484	0.242185251615683
22	36746717	36752275	1	loss	A	-1	somatic	0	0.0198590462118662	0.0535820042407607
22	37335865	37346981	2	neutral	AA	54.5678	somatic	0	0.287257535781421	0.324140454096608
22	37572080	37613765	2	neutral	AA	35.1612	somatic	0	0.0199219133751735	0.0666224014219013
22	38316852	38333526	2	neutral	AA	36.3786	somatic	0	0.217271007713468	0.443084045922591
22	38541951	38694796	2	neutral	AA	15.5908	somatic	0	1.61637408849605e-06	2.43081463735528e-06
22	40573400	40578958	2	neutral	AA	54.5678	somatic	0	0.700851877212459	0.834831543851916
22	42521479	42552048	3	gain	AAB	13.4655	germline	1	0.000533479043074347	0.000672815173278996
22	42632639	42704893	2	neutral	AA	29.0725	somatic	0	0.155963061097731	0.291520210742338
22	43077279	43082837	2	neutral	AA	18.4535	somatic	0	0.487365691392374	0.858881316807296
22	43196776	43207892	2	neutral	AA	22.8892	somatic	0	0.17470927209369	0.373118653835179
22	47212431	47223547	2	neutral	AA	36.3786	somatic	0	0.939878147137515	0.939349076423383
22	48504666	48551909	2	neutral	AA	17.951	somatic	0	0.396514557468467	0.711571276370419
22	48593594	48610268	2	neutral	AA	6.9036	somatic	0	0.352596969918645	0.607976682219176
22	49113267	49129941	2	neutral	AA	36.4139	somatic	0	0.686403030406534	0.772148578969957
22	49783006	49888608	2	neutral	AA	65.8717	somatic	0	0.753911810191149	0.938747584768189
X	3523772	3526551	2	gain	AA	11.3364	somatic	0	0.241505691601391	0.483569318920703
X	26083694	26086473	0	loss	-	-1	somatic	0	0.0832658803350615	0.270039204396708
X	70242004	70250341	2	gain	-	-1	germline	1	0.0247089116005239	0.0754397728676492
X	78267756	78270535	2	gain	-	-1	germline	1	0.443283761133197	0.675519906799771
X	79665593	79671151	0	loss	-	-1	germline	1	0.0143068467715649	0.0366329970460897
X	108772839	108778397	0	loss	-	-1	somatic	0	0.014322564885908	0.0366806615699725
X	125271762	125274541	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
X	155560083	155562862	0	loss	-	-1	germline	1	0.0832658803350615	0.270039204396708
Y	10112781	10129455	2	gain	AB	1.68731	somatic	0	0.0477409042550878	0.18144705536449
Y	10654686	10657465	7	gain	-	-1	germline	1	0.0832733824301043	0.270052234006139
Y	10746393	10749172	5	gain	-	-1	germline	1	0.0832788388431289	0.270061710373961
Y	10749172	10754730	2	gain	-	-1	germline	1	0.0432870709226313	0.131246816898261
Y	10754730	10763067	5	gain	-	-1	germline	1	0.00270109992910253	0.00495905043379608
Y	10763067	10774183	3	gain	-	-1	germline	1	0.000973053713189158	0.00288119982230128
Y	10774183	10776962	5	gain	-	-1	germline	1	0.0832802029916369	0.270064079503844
Y	10776962	10793636	3	gain	-	-1	germline	1	3.55083035386644e-05	5.85053617657705e-05
Y	10793636	10796415	4	gain	-	-1	germline	1	0.0832822492483382	0.270067633227112
Y	10796415	10801973	6	gain	-	-1	germline	1	0.0143105057945596	0.0366381823919499
Y	10801973	10807531	2	gain	-	-1	germline	1	0.142069023925782	0.468550324438584
Y	10810310	10821426	2	gain	-	-1	germline	1	0.0088727955147463	0.011977813152969
Y	10821426	10826984	3	gain	-	-1	germline	1	0.0143142732981269	0.0366436925255562
Y	10826984	10843658	2	gain	-	-1	germline	1	0.00270669115521079	0.00583315866776257
Y	10843658	10846437	4	gain	-	-1	germline	1	0.0832863418839248	0.270074740776052
Y	10846437	10879785	2	gain	-	-1	germline	1	0.0132031225985041	0.00302915609677967
Y	10879785	10896459	3	gain	-	-1	germline	1	0.000545610547997618	0.000710687349660621
Y	10924249	10927028	5	gain	-	-1	germline	1	0.0832802029916369	0.270064079503844
Y	10927028	10935365	2	gain	-	-1	germline	1	0.564498712394711	0.65777732336132
Y	10935365	10938144	4	gain	-	-1	germline	1	0.0832808850726787	0.270065264074474
Y	10938144	10954818	2	gain	-	-1	germline	1	0.510718420323968	0.27911549722544
Y	10957597	10974271	4	gain	-	-1	germline	1	0.00270333650899488	0.00496563476505718
Y	10979829	10985387	3	gain	-	-1	germline	1	0.0144054434102375	0.0369119689052736
Y	10985387	10988166	14	gain	-	-1	germline	1	0.0832658803350615	0.270039204396715
Y	10988166	10990945	4	gain	-	-1	germline	1	0.0832877061319903	0.270077109989374
Y	10990945	10999282	2	gain	-	-1	germline	1	0.863070413525244	0.893928769586143
Y	10999282	11002061	8	gain	-	-1	germline	1	0.0832727003988392	0.270051049477228
Y	11013177	11015956	16	gain	-	-1	germline	1	0.0832658803350615	0.270039204396715
Y	11015956	11040967	2	gain	AA	12.7947	germline	1	0.20660964819943	0.200797028484015
Y	11291077	11304972	25	gain	AAAAAAAAAAAAAAAABBBBBBBBB	22.6087	germline	1	0.000107517979233775	9.08068882627955e-05
Y	11304972	11335541	13	gain	AAAAAAAAABBBB	4.3173	germline	1	4.59415392542705e-06	1.66390727229793e-06
Y	11530071	11532850	20	gain	AAAAAAAAAAAAAAAAAABB	100	germline	1	0.0832658803350615	0.270039204396715
Y	11685695	11688474	3	gain	AAA	100	germline	1	0.0833238653021007	0.270139899670336
Y	11688474	11691253	6	gain	AAAABB	38.6482	germline	1	0.0832774747127219	0.270059341259249
Y	11716264	11719043	3	gain	AAA	8.35445	germline	1	0.0832952098199262	0.270090140933822
Y	11721822	11724601	43	gain	AAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBBBBB	100	germline	1	0.0832651983535707	0.270038019909523
Y	11724601	11746833	2	gain	AA	2.56744	germline	1	0.388734025404276	0.0790152229955678
Y	11746833	11749612	11	gain	AAAAAAABBBB	13.5042	germline	1	0.0832672443116177	0.270041573382477
Y	26636715	26642273	4	gain	AABB	8.27901	germline	1	0.0143128738375353	0.0366420718227657
Y	26653389	26656168	2	gain	AA	12.315	germline	1	0.348527947743648	0.592602061892012
Y	56824992	56838887	16	gain	AAAAAAAAAABBBBBB	3.38721	germline	1	0.000107521003409996	9.08109049203576e-05
Y	56838887	56844445	5	gain	AAAAB	17.7948	germline	1	0.0143106134253786	0.0366385064973875
