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Solution structure of the LDL receptor EGF-AB pair: A paradigm for the assembly of tandem calcium binding EGF domains

Solution structure of the LDL receptor EGF-AB pair: A paradigm for the assembly of tandem calcium binding EGF domains
Solution structure of the LDL receptor EGF-AB pair: A paradigm for the assembly of tandem calcium binding EGF domains
Background: From the observed structure and sequence of a pair of calcium binding (cb) epidermal growth factor-like (EGF) domains from human fibrillin-1, we proposed that many tandem cbEGF domains adopt a conserved relative conformation. The low-density lipoprotein receptor (LDLR), which is functionally unrelated to fibrillin-1, contains a single pair of EGF domains that was chosen for study in the validation of this hypothesis. The LDLR is the protein that is defective in familial hypercholesterolaemia, a common genetic disorder that predisposes individuals to cardiovascular complications and premature death.
Results: Here, we present the solution structure of the first two EGF domains from the LDL receptor, determined using conventional NMR restraints and residual dipolar couplings. The cbEGF domains have an elongated, rod-like arrangement, as predicted. The new structure allows a detailed assessment of the consequences of mutations associated with familial hypercholesterolaemia to be made.
Conclusions: The validation of the conserved arrangement of EGF domains in functionally distinct proteins has important implications for structural genomics, since multiple tandem cbEGF pairs have been identified in many essential proteins that are implicated in human disease. Our results provide the means to use homology modeling to probe structure-function relationships in this diverse family of proteins and may hold the potential for the design of novel diagnostics and therapies in the future.
0969-2126
451-456
Saha, S.
9661ca07-a485-45ed-b5b7-4523271165f0
Boyd, J.
9ec0f4d3-1a8d-4400-be7e-53e04d898585
Werner, J.M.
1b02513a-8310-4f4f-adac-dc2a466bd115
Knott, V.
c8814d2c-7327-420d-97bd-f5334ffa2371
Handford, P.A.
5e95893f-6f92-4d07-af9e-fc7c8336c563
Campbell, I.D.
36f9eac7-5354-4334-9d77-dc660f260ef1
Downing, A.K.
67226fba-1b41-487f-b920-d859d18b10c1
Saha, S.
9661ca07-a485-45ed-b5b7-4523271165f0
Boyd, J.
9ec0f4d3-1a8d-4400-be7e-53e04d898585
Werner, J.M.
1b02513a-8310-4f4f-adac-dc2a466bd115
Knott, V.
c8814d2c-7327-420d-97bd-f5334ffa2371
Handford, P.A.
5e95893f-6f92-4d07-af9e-fc7c8336c563
Campbell, I.D.
36f9eac7-5354-4334-9d77-dc660f260ef1
Downing, A.K.
67226fba-1b41-487f-b920-d859d18b10c1

Saha, S., Boyd, J., Werner, J.M., Knott, V., Handford, P.A., Campbell, I.D. and Downing, A.K. (2001) Solution structure of the LDL receptor EGF-AB pair: A paradigm for the assembly of tandem calcium binding EGF domains. Structure, 9 (6), 451-456.

Record type: Article

Abstract

Background: From the observed structure and sequence of a pair of calcium binding (cb) epidermal growth factor-like (EGF) domains from human fibrillin-1, we proposed that many tandem cbEGF domains adopt a conserved relative conformation. The low-density lipoprotein receptor (LDLR), which is functionally unrelated to fibrillin-1, contains a single pair of EGF domains that was chosen for study in the validation of this hypothesis. The LDLR is the protein that is defective in familial hypercholesterolaemia, a common genetic disorder that predisposes individuals to cardiovascular complications and premature death.
Results: Here, we present the solution structure of the first two EGF domains from the LDL receptor, determined using conventional NMR restraints and residual dipolar couplings. The cbEGF domains have an elongated, rod-like arrangement, as predicted. The new structure allows a detailed assessment of the consequences of mutations associated with familial hypercholesterolaemia to be made.
Conclusions: The validation of the conserved arrangement of EGF domains in functionally distinct proteins has important implications for structural genomics, since multiple tandem cbEGF pairs have been identified in many essential proteins that are implicated in human disease. Our results provide the means to use homology modeling to probe structure-function relationships in this diverse family of proteins and may hold the potential for the design of novel diagnostics and therapies in the future.

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Published date: June 2001

Identifiers

Local EPrints ID: 56162
URI: http://eprints.soton.ac.uk/id/eprint/56162
ISSN: 0969-2126
PURE UUID: b1724219-64ba-47ae-9fea-89d873045934
ORCID for J.M. Werner: ORCID iD orcid.org/0000-0002-4712-1833

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Date deposited: 07 Aug 2008
Last modified: 23 Jul 2022 01:52

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Contributors

Author: S. Saha
Author: J. Boyd
Author: J.M. Werner ORCID iD
Author: V. Knott
Author: P.A. Handford
Author: I.D. Campbell
Author: A.K. Downing

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