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Characterisation of the in vitro activity of the depsipeptide histone deacetylase inhibitor spiruchostatin A

Characterisation of the in vitro activity of the depsipeptide histone deacetylase inhibitor spiruchostatin A
Characterisation of the in vitro activity of the depsipeptide histone deacetylase inhibitor spiruchostatin A
We recently completed the total synthesis of spiruchostatin A, a depsipeptide natural product with close structural similarities to FK228, a histone deacetylase (HDAC) inhibitor (HDI) currently being evaluated in clinical trials for cancer. Here we report a detailed characterisation of the in vitro activity of spiruchostatin A. Spiruchostatin A was a potent (sub-nM) inhibitor of class I HDAC activity in vitro and acted as a prodrug, requiring reduction for activity. Spiruchostatin A was a potent (low nM) inhibitor of the growth of various cancer cell lines. Spiruchostatin A-induced acetylation of specific lysine residues within histones H3 and H4, and increased the expression of p21(cip1/waf1), but did not induce acetylation of alpha-tubulin. Spiruchostatin A also induced cell cycle arrest, differentiation and cell death in MCF7 breast cancer cells. Like FK228, spiruchostatin A was both an inducer and substrate of the ABCB1 drug efflux pump. Whereas spiruchostatin A and FK228-induced protracted histone acetylation, hydroxamate HDI-induced short-lived histone acetylation. Using a subset of HDI-target genes identified by microarray analysis, we demonstrated that these differences in kinetics of histone acetylation between HDI correlated with differences in the kinetics of induction or repression of specific target genes. Our results demonstrate that spiruchostatin A is a potent inhibitor of class I HDACs and anti-cancer agent. Differences in the kinetics of action of HDI may be important for the clinical application of these compounds.
spiruchstatin a, depsipeptide, fk228, histone deacetylase inhibitor, cancer, epigenetic
0006-2952
463-475
Crabb, S.J.
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Howell, M.
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Rogers, H.
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Ishfaq, M.
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Yurek-George, A.
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Carey, K.
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Pickering, B.M.
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East, P.
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Mitter, R.
dada2010-a5e1-4dd7-8bbd-aa52104f997e
Maeda, S.
bf2c77bc-9a0d-4fa3-b029-7bb85863ae12
Johnson, P.W.M.
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Townsend, P.
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Shin-Ya, K.
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Yoshida, M.
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Ganesan, A.
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Packham, G.
fdabe56f-2c58-469c-aadf-38878f233394
Crabb, S.J.
bcd1b566-7677-4f81-8429-3ab0e85f8373
Howell, M.
dfc9bbda-0aa8-417c-8b3b-5ca605ff5891
Rogers, H.
a9232988-18be-462d-bfff-b85e4cb3359c
Ishfaq, M.
d9e3048c-2d3c-47be-9d03-b7d90f296279
Yurek-George, A.
55a17141-bdfa-4902-ac74-8186971b3c21
Carey, K.
27d640da-45d6-4880-a20b-0027dcc3f321
Pickering, B.M.
33fb6c48-ca72-4e0f-9a54-9cab462c1c16
East, P.
af6a7c1a-37c8-4795-88e6-1dace06e6569
Mitter, R.
dada2010-a5e1-4dd7-8bbd-aa52104f997e
Maeda, S.
bf2c77bc-9a0d-4fa3-b029-7bb85863ae12
Johnson, P.W.M.
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Townsend, P.
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Shin-Ya, K.
3e1a6dd1-8477-4cc1-9f9a-66400dfee84d
Yoshida, M.
64c740a7-2c05-4803-b18b-477a9a383e07
Ganesan, A.
62aa5a87-9308-4383-8686-99726b6bcfb9
Packham, G.
fdabe56f-2c58-469c-aadf-38878f233394

Crabb, S.J., Howell, M., Rogers, H., Ishfaq, M., Yurek-George, A., Carey, K., Pickering, B.M., East, P., Mitter, R., Maeda, S., Johnson, P.W.M., Townsend, P., Shin-Ya, K., Yoshida, M., Ganesan, A. and Packham, G. (2008) Characterisation of the in vitro activity of the depsipeptide histone deacetylase inhibitor spiruchostatin A. Biochemical Pharmacology, 76 (4), 463-475. (doi:10.1016/j.bcp.2008.06.004). (PMID:18611394)

Record type: Article

Abstract

We recently completed the total synthesis of spiruchostatin A, a depsipeptide natural product with close structural similarities to FK228, a histone deacetylase (HDAC) inhibitor (HDI) currently being evaluated in clinical trials for cancer. Here we report a detailed characterisation of the in vitro activity of spiruchostatin A. Spiruchostatin A was a potent (sub-nM) inhibitor of class I HDAC activity in vitro and acted as a prodrug, requiring reduction for activity. Spiruchostatin A was a potent (low nM) inhibitor of the growth of various cancer cell lines. Spiruchostatin A-induced acetylation of specific lysine residues within histones H3 and H4, and increased the expression of p21(cip1/waf1), but did not induce acetylation of alpha-tubulin. Spiruchostatin A also induced cell cycle arrest, differentiation and cell death in MCF7 breast cancer cells. Like FK228, spiruchostatin A was both an inducer and substrate of the ABCB1 drug efflux pump. Whereas spiruchostatin A and FK228-induced protracted histone acetylation, hydroxamate HDI-induced short-lived histone acetylation. Using a subset of HDI-target genes identified by microarray analysis, we demonstrated that these differences in kinetics of histone acetylation between HDI correlated with differences in the kinetics of induction or repression of specific target genes. Our results demonstrate that spiruchostatin A is a potent inhibitor of class I HDACs and anti-cancer agent. Differences in the kinetics of action of HDI may be important for the clinical application of these compounds.

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More information

Published date: 15 August 2008
Keywords: spiruchstatin a, depsipeptide, fk228, histone deacetylase inhibitor, cancer, epigenetic

Identifiers

Local EPrints ID: 59614
URI: http://eprints.soton.ac.uk/id/eprint/59614
ISSN: 0006-2952
PURE UUID: adaf1e2e-a875-48be-92db-bc8032a96e5f
ORCID for S.J. Crabb: ORCID iD orcid.org/0000-0003-3521-9064
ORCID for P.W.M. Johnson: ORCID iD orcid.org/0000-0003-2306-4974
ORCID for G. Packham: ORCID iD orcid.org/0000-0002-9232-5691

Catalogue record

Date deposited: 08 Oct 2008
Last modified: 16 Mar 2024 03:32

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Contributors

Author: S.J. Crabb ORCID iD
Author: M. Howell
Author: H. Rogers
Author: M. Ishfaq
Author: A. Yurek-George
Author: K. Carey
Author: B.M. Pickering
Author: P. East
Author: R. Mitter
Author: S. Maeda
Author: P.W.M. Johnson ORCID iD
Author: P. Townsend
Author: K. Shin-Ya
Author: M. Yoshida
Author: A. Ganesan
Author: G. Packham ORCID iD

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