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A novel medium throughput quantitative competitive PCR technology to simultaneously measure mRNA levels from multiple genes

A novel medium throughput quantitative competitive PCR technology to simultaneously measure mRNA levels from multiple genes
A novel medium throughput quantitative competitive PCR technology to simultaneously measure mRNA levels from multiple genes
There is a great demand for technologies to simultaneously measure mRNA levels from multiple genes. Here we report a new quantitative competitive PCR technology and demonstrate simultaneous quantification of mRNA from multiple genes. First, a sequential 2-fold dilution series containing equal amounts of gene-specific standard DNAs for 10-12 genes is prepared. Second, the serially diluted standard DNAs are individually added to equal amounts of tissue-derived cDNA and amplified with gene-specific primers for 19-26 PCR cycles. Each gene/standard DNA pair is amplified individually. All amplified DNA products (n = 80) are resolved by one microplate array diagonal gel electrophoresis using 5% polyacrylamide. Changes in mRNA levels of approximately 15% can be detected by this technology. The mRNA levels from 10-12 genes were simultaneously quantified. mRNA levels were compared in RNA samples from rat liver, kidney and skeletal muscle. This quick, specific, sensitive, reproducible and yet inexpensive technique is ideal for simultaneously studying co-ordinate changes in mRNA levels from multiple genes.
research support, dna, non-u.s.gov't, genetic, disease, rats, analysis, kidney, liver, reference standards, skeletal, report, polyacrylamide gel, messenger, polymerase chain reaction, animals
0305-1048
e20-[10pp]
Zhang, Junlong
68a8fa77-c5db-4b34-aa9a-fbad6860155f
Day, Ian N.M.
b749b30a-1f4c-40eb-af0e-a50427388b39
Byrne, Christopher D.
1370b997-cead-4229-83a7-53301ed2a43c
Zhang, Junlong
68a8fa77-c5db-4b34-aa9a-fbad6860155f
Day, Ian N.M.
b749b30a-1f4c-40eb-af0e-a50427388b39
Byrne, Christopher D.
1370b997-cead-4229-83a7-53301ed2a43c

Zhang, Junlong, Day, Ian N.M. and Byrne, Christopher D. (2002) A novel medium throughput quantitative competitive PCR technology to simultaneously measure mRNA levels from multiple genes. Nucleic Acids Research, 30 (5), e20-[10pp]. (doi:10.1093/nar/30.5.e20).

Record type: Article

Abstract

There is a great demand for technologies to simultaneously measure mRNA levels from multiple genes. Here we report a new quantitative competitive PCR technology and demonstrate simultaneous quantification of mRNA from multiple genes. First, a sequential 2-fold dilution series containing equal amounts of gene-specific standard DNAs for 10-12 genes is prepared. Second, the serially diluted standard DNAs are individually added to equal amounts of tissue-derived cDNA and amplified with gene-specific primers for 19-26 PCR cycles. Each gene/standard DNA pair is amplified individually. All amplified DNA products (n = 80) are resolved by one microplate array diagonal gel electrophoresis using 5% polyacrylamide. Changes in mRNA levels of approximately 15% can be detected by this technology. The mRNA levels from 10-12 genes were simultaneously quantified. mRNA levels were compared in RNA samples from rat liver, kidney and skeletal muscle. This quick, specific, sensitive, reproducible and yet inexpensive technique is ideal for simultaneously studying co-ordinate changes in mRNA levels from multiple genes.

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More information

Published date: 14 January 2002
Keywords: research support, dna, non-u.s.gov't, genetic, disease, rats, analysis, kidney, liver, reference standards, skeletal, report, polyacrylamide gel, messenger, polymerase chain reaction, animals

Identifiers

Local EPrints ID: 60460
URI: http://eprints.soton.ac.uk/id/eprint/60460
ISSN: 0305-1048
PURE UUID: 656fb0df-0050-4af1-b300-7bdb63ce42e6
ORCID for Christopher D. Byrne: ORCID iD orcid.org/0000-0001-6322-7753

Catalogue record

Date deposited: 08 Sep 2008
Last modified: 16 Mar 2024 03:07

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Contributors

Author: Junlong Zhang
Author: Ian N.M. Day

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