The University of Southampton
University of Southampton Institutional Repository

Letter. NEK1 variants confer susceptibility to amyotrophic lateral sclerosis

Letter. NEK1 variants confer susceptibility to amyotrophic lateral sclerosis
Letter. NEK1 variants confer susceptibility to amyotrophic lateral sclerosis
To identify genetic factors contributing to amyotrophic lateral sclerosis (ALS), we conducted whole-exome analyses of 1,022 index familial ALS (FALS) cases and 7,315 controls. In a new screening strategy, we performed gene-burden analyses trained with established ALS genes and identified a significant association between loss-of-function (LOF) NEK1 variants and FALS risk. Independently, autozygosity mapping for an isolated community in the Netherlands identified a NEK1 p.Arg261His variant as a candidate risk factor. Replication analyses of sporadic ALS (SALS) cases and independent control cohorts confirmed significant disease association for both p.Arg261His (10,589 samples analyzed) and NEK1 LOF variants (3,362 samples analyzed). In total, we observed NEK1 risk variants in nearly 3% of ALS cases. NEK1 has been linked to several cellular functions, including cilia formation, DNA-damage response, microtubule stability, neuronal morphology and axonal polarity. Our results provide new and important insights into ALS etiopathogenesis and genetic etiology.
1061-4036
1037-1042
Kenna, Kevin P.
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van Doormaal, Perry T.C.
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Dekker, Annelot M.
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van Rheenen, Wouter
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Smith, Bradley N.
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Mora, Jesús S.
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van den Berg, Leonard H.
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Miller, Jack W.
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Fallini, Claudia
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McLaughlin, Russell L.
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Mora, Gabriele
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Meitinger, Thomas
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Morrison, Karen E.
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Cereda, Cristina
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Ludolph, Albert C.
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Andersen, Peter M.
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Weishaupt, Jochen H.
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Brown, Robert H.
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Al-Chalabi, Ammar
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Silani, Vincenzo
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Shaw, Christopher E.
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van den Berg, Leonard H.
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Veldink, Jan H.
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Landers, John E.
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Kenna, Kevin P., van Doormaal, Perry T.C., Dekker, Annelot M., Ticozzi, Nicola, Kenna, Brendan J., Diekstra, Frank P., van Rheenen, Wouter, van Eijk, Kristel R., Jones, Ashley R., Keagle, Pamela, Shatunov, Aleksey, Sproviero, William, Smith, Bradley N., van Es, Michael A., Topp, Simon D., Kenna, Aoife, Miller, Jack W., Fallini, Claudia, Tiloca, Cinzia, McLaughlin, Russell L., Vance, Caroline, Troakes, Claire, Colombrita, Claudia, Mora, Gabriele, Calvo, Andrea, Verde, Federico, Al-Sarraj, Safa, King, Andrew, Calini, Daniela, de Belleroche, Jacqueline, Baas, Frank, van der Kooi, Anneke J., de Visser, Marianne, ten Asbroek, Anneloor L.M.A., Sapp, Peter C., McKenna-Yasek, Diane, Polak, Meraida, Asress, Seneshaw, Muñoz-Blanco, José Luis, Strom, Tim M., Meitinger, Thomas, Morrison, Karen E., D'Alfonso, Sandra, Mazzini, Letizia, Comi, Giacomo P., Del Bo, Roberto, Ceroni, Mauro, Gagliardi, Stella, Querin, Giorgia, Bertolin, Cinzia, Pensato, Viviana, Castellotti, Barbara, Corti, Stefania, Cereda, Cristina, Corrado, Lucia, Sorarù, Gianni, Lauria, Giuseppe, Williams, Kelly L., Leigh, P Nigel, Nicholson, Garth A., Blair, Ian P., Leblond, Claire S., Dion, Patrick A., Rouleau, Guy A., Pall, Hardev, Shaw, Pamela J., Turner, Martin R., Talbot, Kevin, Taroni, Franco, Boylan, Kevin B., Van Blitterswijk, Marka, Rademakers, Rosa, Esteban-Pérez, Jesús, García-Redondo, Alberto, Van Damme, Phillip, Robberecht, Wim, Chio, Adriano, Gellera, Cinzia, Drepper, Carsten, Sendtner, Michael, Ratti, Antonia, Glass, Jonathan D., Mora, Jesús S., Basak, Nazli A., Hardiman, Orla, Ludolph, Albert C., Andersen, Peter M., Weishaupt, Jochen H., Brown, Robert H., Al-Chalabi, Ammar, Silani, Vincenzo, Shaw, Christopher E., van den Berg, Leonard H., Veldink, Jan H. and Landers, John E. (2016) Letter. NEK1 variants confer susceptibility to amyotrophic lateral sclerosis. Nature Genetics, 48 (9), 1037-1042. (doi:10.1038/ng.3626). (PMID:27455347)

Record type: Article

Abstract

To identify genetic factors contributing to amyotrophic lateral sclerosis (ALS), we conducted whole-exome analyses of 1,022 index familial ALS (FALS) cases and 7,315 controls. In a new screening strategy, we performed gene-burden analyses trained with established ALS genes and identified a significant association between loss-of-function (LOF) NEK1 variants and FALS risk. Independently, autozygosity mapping for an isolated community in the Netherlands identified a NEK1 p.Arg261His variant as a candidate risk factor. Replication analyses of sporadic ALS (SALS) cases and independent control cohorts confirmed significant disease association for both p.Arg261His (10,589 samples analyzed) and NEK1 LOF variants (3,362 samples analyzed). In total, we observed NEK1 risk variants in nearly 3% of ALS cases. NEK1 has been linked to several cellular functions, including cilia formation, DNA-damage response, microtubule stability, neuronal morphology and axonal polarity. Our results provide new and important insights into ALS etiopathogenesis and genetic etiology.

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Accepted/In Press date: 24 June 2016
e-pub ahead of print date: 25 July 2016
Published date: September 2016
Organisations: Medical Education

Identifiers

Local EPrints ID: 399615
URI: http://eprints.soton.ac.uk/id/eprint/399615
ISSN: 1061-4036
PURE UUID: 460297fa-3954-4919-8eaf-8c9db7a30fdf
ORCID for Karen E. Morrison: ORCID iD orcid.org/0000-0003-0216-5717

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Date deposited: 19 Aug 2016 13:35
Last modified: 15 Mar 2024 05:50

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Contributors

Author: Kevin P. Kenna
Author: Perry T.C. van Doormaal
Author: Annelot M. Dekker
Author: Nicola Ticozzi
Author: Brendan J. Kenna
Author: Frank P. Diekstra
Author: Wouter van Rheenen
Author: Kristel R. van Eijk
Author: Ashley R. Jones
Author: Pamela Keagle
Author: Aleksey Shatunov
Author: William Sproviero
Author: Bradley N. Smith
Author: Michael A. van Es
Author: Simon D. Topp
Author: Aoife Kenna
Author: Jack W. Miller
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