TINKTEP: A fully self-consistent, mutually polarizable QM/MM approach based on the AMOEBA force field
TINKTEP: A fully self-consistent, mutually polarizable QM/MM approach based on the AMOEBA force field
We present a novel quantum mechanical/molecular mechanics (QM/MM) approach in which a quantum subsystem is coupled to a classical subsystem described by the AMOEBA polarizable force field. Our approach permits mutual polarization between the QM and MM subsystems, effected through multipolar electrostatics. Self-consistency is achieved for both the QM and MM subsystems through a total energy minimization scheme. We provide an expression for the Hamiltonian of the coupled QM/MM system, which we minimize using gradient methods. The QM subsystem is described by the onetep linear-scaling DFT approach, which makes use of strictly localized orbitals expressed in a set of periodic sinc basis functions equivalent to plane waves. The MM subsystem is described by the multipolar, polarizable force field AMOEBA, as implemented in tinker. Distributed multipole analysis is used to obtain, on the fly, a classical representation of the QM subsystem in terms of atom-centered multipoles. This auxiliary representation is used for all polarization interactions between QM and MM, allowing us to treat them on the same footing as in AMOEBA. We validate our method in tests of solute-solvent interaction energies, for neutral and charged molecules, demonstrating the simultaneous optimization of the quantum and classical degrees of freedom. Encouragingly, we find that the inclusion of explicit polarization in the MM part of QM/MM improves the agreement with fully QM calculations.
1-19
Dziedzic, Jacek
8e2fdb55-dade-4ae4-bf1f-a148a89e4383
Mao, Yuezhi
19117f2e-bd57-431d-ad0e-f36f4aa2187c
Shao, Yihan
6b0b8a41-eacf-4359-b7b1-79058fecbc81
Ponder, Jay
e48ececb-1dcf-4409-9106-4a7c8e0292a2
Head-Gordon, Teresa
11febdf4-20fa-4abb-97a1-3305c6e81b09
Head-Gordon, Martin
f203c934-60ff-4c19-a2ff-b1f6ec2ad05a
Skylaris, Chris
8f593d13-3ace-4558-ba08-04e48211af61
23 September 2016
Dziedzic, Jacek
8e2fdb55-dade-4ae4-bf1f-a148a89e4383
Mao, Yuezhi
19117f2e-bd57-431d-ad0e-f36f4aa2187c
Shao, Yihan
6b0b8a41-eacf-4359-b7b1-79058fecbc81
Ponder, Jay
e48ececb-1dcf-4409-9106-4a7c8e0292a2
Head-Gordon, Teresa
11febdf4-20fa-4abb-97a1-3305c6e81b09
Head-Gordon, Martin
f203c934-60ff-4c19-a2ff-b1f6ec2ad05a
Skylaris, Chris
8f593d13-3ace-4558-ba08-04e48211af61
Dziedzic, Jacek, Mao, Yuezhi, Shao, Yihan, Ponder, Jay, Head-Gordon, Teresa, Head-Gordon, Martin and Skylaris, Chris
(2016)
TINKTEP: A fully self-consistent, mutually polarizable QM/MM approach based on the AMOEBA force field.
Journal of Chemical Physics, 145 (12), , [124106].
(doi:10.1063/1.4962909).
Abstract
We present a novel quantum mechanical/molecular mechanics (QM/MM) approach in which a quantum subsystem is coupled to a classical subsystem described by the AMOEBA polarizable force field. Our approach permits mutual polarization between the QM and MM subsystems, effected through multipolar electrostatics. Self-consistency is achieved for both the QM and MM subsystems through a total energy minimization scheme. We provide an expression for the Hamiltonian of the coupled QM/MM system, which we minimize using gradient methods. The QM subsystem is described by the onetep linear-scaling DFT approach, which makes use of strictly localized orbitals expressed in a set of periodic sinc basis functions equivalent to plane waves. The MM subsystem is described by the multipolar, polarizable force field AMOEBA, as implemented in tinker. Distributed multipole analysis is used to obtain, on the fly, a classical representation of the QM subsystem in terms of atom-centered multipoles. This auxiliary representation is used for all polarization interactions between QM and MM, allowing us to treat them on the same footing as in AMOEBA. We validate our method in tests of solute-solvent interaction energies, for neutral and charged molecules, demonstrating the simultaneous optimization of the quantum and classical degrees of freedom. Encouragingly, we find that the inclusion of explicit polarization in the MM part of QM/MM improves the agreement with fully QM calculations.
Text
pdf_archiveJCPSA6vol_145iss_12124106_1_am.pdf
- Accepted Manuscript
More information
Accepted/In Press date: 5 September 2016
Published date: 23 September 2016
Organisations:
Computational Systems Chemistry
Identifiers
Local EPrints ID: 400774
URI: http://eprints.soton.ac.uk/id/eprint/400774
ISSN: 0021-9606
PURE UUID: ce748379-7d85-44ff-9b4a-1fbb0cfbd857
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Date deposited: 27 Sep 2016 09:31
Last modified: 15 Mar 2024 03:35
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Contributors
Author:
Yuezhi Mao
Author:
Yihan Shao
Author:
Jay Ponder
Author:
Teresa Head-Gordon
Author:
Martin Head-Gordon
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