Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling
Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling
We describe the implementation of a Monte Carlo basin hopping (BH) global optimization procedure for the prediction of molecular crystal structures. The BH method is combined with quasi-random (QR) structure generation in a hybrid method for crystal structure prediction, QR-BH, which combines the low-discrepancy sampling provided by QR sequences with BH efficiency at locating low energy structures. Through tests on a set of single-component molecular crystals and co-crystals, we demonstrate that QR-BH provides faster location of low energy structures than pure QR sampling, while maintaining the efficient location of higher energy structures that are important for identifying important polymorphs.
crystal structure prediction
1988-1999
Yang, Shiyue
84a0b201-e9ff-4a05-9287-388e7a99eb49
Day, Graeme M.
e3be79ba-ad12-4461-b735-74d5c4355636
9 March 2021
Yang, Shiyue
84a0b201-e9ff-4a05-9287-388e7a99eb49
Day, Graeme M.
e3be79ba-ad12-4461-b735-74d5c4355636
Yang, Shiyue and Day, Graeme M.
(2021)
Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling.
Journal of Chemical Theory and Computation, 17 (3), .
(doi:10.1021/acs.jctc.0c01101).
Abstract
We describe the implementation of a Monte Carlo basin hopping (BH) global optimization procedure for the prediction of molecular crystal structures. The BH method is combined with quasi-random (QR) structure generation in a hybrid method for crystal structure prediction, QR-BH, which combines the low-discrepancy sampling provided by QR sequences with BH efficiency at locating low energy structures. Through tests on a set of single-component molecular crystals and co-crystals, we demonstrate that QR-BH provides faster location of low energy structures than pure QR sampling, while maintaining the efficient location of higher energy structures that are important for identifying important polymorphs.
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Accepted/In Press date: 19 January 2021
e-pub ahead of print date: 2 February 2021
Published date: 9 March 2021
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Keywords:
crystal structure prediction
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Local EPrints ID: 446361
URI: http://eprints.soton.ac.uk/id/eprint/446361
ISSN: 1549-9618
PURE UUID: bf0de6c7-f102-4b55-9280-0812399e43b1
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Date deposited: 05 Feb 2021 17:31
Last modified: 17 Mar 2024 06:16
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Author:
Shiyue Yang
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