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Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling

Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling
Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling

We describe the implementation of a Monte Carlo basin hopping (BH) global optimization procedure for the prediction of molecular crystal structures. The BH method is combined with quasi-random (QR) structure generation in a hybrid method for crystal structure prediction, QR-BH, which combines the low-discrepancy sampling provided by QR sequences with BH efficiency at locating low energy structures. Through tests on a set of single-component molecular crystals and co-crystals, we demonstrate that QR-BH provides faster location of low energy structures than pure QR sampling, while maintaining the efficient location of higher energy structures that are important for identifying important polymorphs.

crystal structure prediction
1549-9618
1988-1999
Yang, Shiyue
84a0b201-e9ff-4a05-9287-388e7a99eb49
Day, Graeme M.
e3be79ba-ad12-4461-b735-74d5c4355636
Yang, Shiyue
84a0b201-e9ff-4a05-9287-388e7a99eb49
Day, Graeme M.
e3be79ba-ad12-4461-b735-74d5c4355636

Yang, Shiyue and Day, Graeme M. (2021) Exploration and optimization in crystal structure prediction: combining basin hopping with quasi-random sampling. Journal of Chemical Theory and Computation, 17 (3), 1988-1999. (doi:10.1021/acs.jctc.0c01101).

Record type: Article

Abstract

We describe the implementation of a Monte Carlo basin hopping (BH) global optimization procedure for the prediction of molecular crystal structures. The BH method is combined with quasi-random (QR) structure generation in a hybrid method for crystal structure prediction, QR-BH, which combines the low-discrepancy sampling provided by QR sequences with BH efficiency at locating low energy structures. Through tests on a set of single-component molecular crystals and co-crystals, we demonstrate that QR-BH provides faster location of low energy structures than pure QR sampling, while maintaining the efficient location of higher energy structures that are important for identifying important polymorphs.

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Accepted/In Press date: 19 January 2021
e-pub ahead of print date: 2 February 2021
Published date: 9 March 2021
Additional Information: Publisher Copyright: ©
Keywords: crystal structure prediction

Identifiers

Local EPrints ID: 446361
URI: http://eprints.soton.ac.uk/id/eprint/446361
ISSN: 1549-9618
PURE UUID: bf0de6c7-f102-4b55-9280-0812399e43b1
ORCID for Graeme M. Day: ORCID iD orcid.org/0000-0001-8396-2771

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Date deposited: 05 Feb 2021 17:31
Last modified: 17 Mar 2024 06:16

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Contributors

Author: Shiyue Yang
Author: Graeme M. Day ORCID iD

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