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Adverse prognostic impact of the KIT D816V transcriptional activity in advanced systemic mastocytosis

Adverse prognostic impact of the KIT D816V transcriptional activity in advanced systemic mastocytosis
Adverse prognostic impact of the KIT D816V transcriptional activity in advanced systemic mastocytosis
In systemic mastocytosis (SM), qualitative and serial quantitative assessment of the KIT D816V mutation is of diagnostic and prognostic relevance. We investigated peripheral blood and bone marrow samples of 161 patients (indolent SM (ISM), n = 40; advanced SM, AdvSM, n = 121) at referral and during follow-up for the KIT D816V variant allele frequency (VAF) at the DNA-level and the KIT D816V expressed allele burden (EAB) at the RNA-level. A round robin test with four participating laboratories revealed an excellent correlation (r > 0.99, R2 > 0.98) between three different DNA-assays. VAF and EAB strongly correlated in ISM (r = 0.91, coefficient of determination, R2 = 0.84) but only to a lesser extent in AdvSM (r = 0.71; R2 = 0.5). However, as compared to an EAB/VAF ratio ≤2 (cohort A, 77/121 patients, 64%) receiver operating characteristic (ROC) analysis identified an EAB/VAF ratio of >2 (cohort B, 44/121 patients, 36%) as predictive for an advanced phenotype and a significantly inferior median survival (3.3 vs. 11.7 years; p = 0.005). In terms of overall survival, Cox-regression analysis was only significant for the EAB/VAF ratio >2 (p = 0.006) but not for VAF or EAB individually. This study demonstrates for the first time that the transcriptional activity of KIT D816V may play an important role in the pathophysiology of SM.
Advanced SM, Allele burden, KIT D816V, Survival, Variant allele frequency
1422-0067
1-12
Naumann, Nicole
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Lübke, Johannes
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Baumann, Sofie
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Schwaab, Juliana
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Haufmann, Oliver
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Kreil, Sebastian
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Dangelo, Vito
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Reiter, Lukas
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Bugert, Peter
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Kristensen, Thomas
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Sotlar, Karl
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Haselmann, Verena
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Schneider, Sven
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Metzgeroth, Georgia
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Weiss, Christel
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Popp, Henning D.
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Fabarius, Alice
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Hofmann, Wolf-Karsten
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Cross, Nicholas
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Reiter, Andreas
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Jawhar, Mohamad
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Naumann, Nicole
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Lübke, Johannes
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Baumann, Sofie
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Schwaab, Juliana
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Haufmann, Oliver
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Kreil, Sebastian
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Dangelo, Vito
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Reiter, Lukas
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Bugert, Peter
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Kristensen, Thomas
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Sotlar, Karl
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Haselmann, Verena
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Schneider, Sven
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Metzgeroth, Georgia
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Weiss, Christel
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Popp, Henning D.
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Fabarius, Alice
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Hofmann, Wolf-Karsten
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Cross, Nicholas
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Reiter, Andreas
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Jawhar, Mohamad
a608a215-173b-47bd-89eb-a8de2fe595aa

Naumann, Nicole, Lübke, Johannes, Baumann, Sofie, Schwaab, Juliana, Haufmann, Oliver, Kreil, Sebastian, Dangelo, Vito, Reiter, Lukas, Bugert, Peter, Kristensen, Thomas, Sotlar, Karl, Haselmann, Verena, Schneider, Sven, Metzgeroth, Georgia, Weiss, Christel, Popp, Henning D., Fabarius, Alice, Hofmann, Wolf-Karsten, Cross, Nicholas, Reiter, Andreas and Jawhar, Mohamad (2021) Adverse prognostic impact of the KIT D816V transcriptional activity in advanced systemic mastocytosis. International Journal of Molecular Sciences, 22 (5), 1-12, [2562]. (doi:10.3390/ijms22052562).

Record type: Article

Abstract

In systemic mastocytosis (SM), qualitative and serial quantitative assessment of the KIT D816V mutation is of diagnostic and prognostic relevance. We investigated peripheral blood and bone marrow samples of 161 patients (indolent SM (ISM), n = 40; advanced SM, AdvSM, n = 121) at referral and during follow-up for the KIT D816V variant allele frequency (VAF) at the DNA-level and the KIT D816V expressed allele burden (EAB) at the RNA-level. A round robin test with four participating laboratories revealed an excellent correlation (r > 0.99, R2 > 0.98) between three different DNA-assays. VAF and EAB strongly correlated in ISM (r = 0.91, coefficient of determination, R2 = 0.84) but only to a lesser extent in AdvSM (r = 0.71; R2 = 0.5). However, as compared to an EAB/VAF ratio ≤2 (cohort A, 77/121 patients, 64%) receiver operating characteristic (ROC) analysis identified an EAB/VAF ratio of >2 (cohort B, 44/121 patients, 36%) as predictive for an advanced phenotype and a significantly inferior median survival (3.3 vs. 11.7 years; p = 0.005). In terms of overall survival, Cox-regression analysis was only significant for the EAB/VAF ratio >2 (p = 0.006) but not for VAF or EAB individually. This study demonstrates for the first time that the transcriptional activity of KIT D816V may play an important role in the pathophysiology of SM.

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Accepted/In Press date: 26 February 2021
e-pub ahead of print date: 4 March 2021
Published date: March 2021
Additional Information: Publisher Copyright: © 2021 by the authors. Licensee MDPI, Basel, Switzerland.
Keywords: Advanced SM, Allele burden, KIT D816V, Survival, Variant allele frequency

Identifiers

Local EPrints ID: 447581
URI: http://eprints.soton.ac.uk/id/eprint/447581
ISSN: 1422-0067
PURE UUID: be944f0d-559d-45cb-9f80-72c040a99f23
ORCID for Nicholas Cross: ORCID iD orcid.org/0000-0001-5481-2555

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Date deposited: 16 Mar 2021 17:44
Last modified: 17 Mar 2024 02:54

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Contributors

Author: Nicole Naumann
Author: Johannes Lübke
Author: Sofie Baumann
Author: Juliana Schwaab
Author: Oliver Haufmann
Author: Sebastian Kreil
Author: Vito Dangelo
Author: Lukas Reiter
Author: Peter Bugert
Author: Thomas Kristensen
Author: Karl Sotlar
Author: Verena Haselmann
Author: Sven Schneider
Author: Georgia Metzgeroth
Author: Christel Weiss
Author: Henning D. Popp
Author: Alice Fabarius
Author: Wolf-Karsten Hofmann
Author: Nicholas Cross ORCID iD
Author: Andreas Reiter
Author: Mohamad Jawhar

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