The University of Southampton
University of Southampton Institutional Repository

Generating images of hydrated pollen grains using deep learning

Generating images of hydrated pollen grains using deep learning
Generating images of hydrated pollen grains using deep learning
Pollen grains dehydrate during their development and following their departure from the host stigma. Since the size and shape of a pollen grain can be dependent on environmental conditions, being able to predict both of these factors for hydrated pollen grains from their dehydrated state could be beneficial in the fields of climate science, agriculture, and palynology. Here, we use deep learning to transform images of dehydrated Ranunculus pollen grains into images of hydrated Ranunculus pollen grains. We also then use a deep learning neural network that was trained on experimental images of different genera of pollen grains to identify the hydrated pollen grains from the generated transformed images, to test the accuracy of the image generation neural network. This pilot work demonstrates the first steps needed towards creating a general deep learning-based rehydration model that could be useful in understanding and predicting pollen morphology.
Grant-Jacob, James
c5d144d8-3c43-4195-8e80-edd96bfda91b
Praeger, Matthew
84575f28-4530-4f89-9355-9c5b6acc6cac
Eason, R.W.
e38684c3-d18c-41b9-a4aa-def67283b020
Mills, Benjamin
05f1886e-96ef-420f-b856-4115f4ab36d0
Grant-Jacob, James
c5d144d8-3c43-4195-8e80-edd96bfda91b
Praeger, Matthew
84575f28-4530-4f89-9355-9c5b6acc6cac
Eason, R.W.
e38684c3-d18c-41b9-a4aa-def67283b020
Mills, Benjamin
05f1886e-96ef-420f-b856-4115f4ab36d0

Grant-Jacob, James, Praeger, Matthew, Eason, R.W. and Mills, Benjamin (2022) Generating images of hydrated pollen grains using deep learning. IOP SciNotes, 3 (2). (doi:10.1088/2633-1357/ac6780).

Record type: Article

Abstract

Pollen grains dehydrate during their development and following their departure from the host stigma. Since the size and shape of a pollen grain can be dependent on environmental conditions, being able to predict both of these factors for hydrated pollen grains from their dehydrated state could be beneficial in the fields of climate science, agriculture, and palynology. Here, we use deep learning to transform images of dehydrated Ranunculus pollen grains into images of hydrated Ranunculus pollen grains. We also then use a deep learning neural network that was trained on experimental images of different genera of pollen grains to identify the hydrated pollen grains from the generated transformed images, to test the accuracy of the image generation neural network. This pilot work demonstrates the first steps needed towards creating a general deep learning-based rehydration model that could be useful in understanding and predicting pollen morphology.

Text
Grant-Jacob_2022_IOP_SciNotes_3_024001 - Version of Record
Available under License Creative Commons Attribution.
Download (944kB)

More information

Accepted/In Press date: 14 April 2022
Published date: 26 April 2022

Identifiers

Local EPrints ID: 456890
URI: http://eprints.soton.ac.uk/id/eprint/456890
PURE UUID: c383cb8d-9d24-4e23-8ca5-b7eae4bf83fc
ORCID for James Grant-Jacob: ORCID iD orcid.org/0000-0002-4270-4247
ORCID for Matthew Praeger: ORCID iD orcid.org/0000-0002-5814-6155
ORCID for R.W. Eason: ORCID iD orcid.org/0000-0001-9704-2204
ORCID for Benjamin Mills: ORCID iD orcid.org/0000-0002-1784-1012

Catalogue record

Date deposited: 16 May 2022 16:31
Last modified: 17 Mar 2024 03:22

Export record

Altmetrics

Contributors

Author: James Grant-Jacob ORCID iD
Author: Matthew Praeger ORCID iD
Author: R.W. Eason ORCID iD
Author: Benjamin Mills ORCID iD

Download statistics

Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.

View more statistics

Atom RSS 1.0 RSS 2.0

Contact ePrints Soton: eprints@soton.ac.uk

ePrints Soton supports OAI 2.0 with a base URL of http://eprints.soton.ac.uk/cgi/oai2

This repository has been built using EPrints software, developed at the University of Southampton, but available to everyone to use.

We use cookies to ensure that we give you the best experience on our website. If you continue without changing your settings, we will assume that you are happy to receive cookies on the University of Southampton website.

×