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Exploring the genetics of airflow limitation in lung function across the lifespan – a polygenic risk score study

Exploring the genetics of airflow limitation in lung function across the lifespan – a polygenic risk score study
Exploring the genetics of airflow limitation in lung function across the lifespan – a polygenic risk score study
Background: chronic obstructive pulmonary disease (COPD) is caused by interactions between many factors across the life course, including genetics. A proportion of COPD may be due to reduced lung growth in childhood. We hypothesized that a polygenic risk score (PRS) for COPD is associated with lower lung function already in childhood and up to adulthood.

Methods: a weighted PRS was calculated based on the 82 association signals (p≤5x10-8) revealed by the largest GWAS of airflow limitation (defined as COPD) to date. This PRS was tested in association with lung function measures (FEV1, FVC, and FEV1/FVC) in subjects aged 4-50 years from 16 independent cohorts participating in the Chronic Airway Diseases Early Stratification (CADSET) Clinical Research Collaboration. Age-stratified meta-analyses were conducted combining the results from each cohort (n=45,406). These findings were validated in subjects >50 years old.

Findings: we found significant associations between the PRS for airflow limitation and: (1) lower pre-bronchodilator FEV1/FVC from school age (7-10 years; β: -0·13 z-scores per one PRS z-score increase [-0·15, -0·11], q-value=7·04x10-53) to adulthood (41-50 years; β: -0·16 [-0·19, -0·13], q-value=1·31x10-24); and (2) lower FEV1 (from school age: 7-10 years; β: -0·07 [-0·09, -0·05], q-value=1.65x10-9, to adulthood: 41-50 years; β: -0·17 [-0·20, -0·13], q-value=4.48 x 10-20). No effect modification by smoking, sex, or a diagnosis of asthma was observed.

Interpretation: we provide evidence that a higher genetic risk for COPD is linked to lower lung function from childhood onwards.
Polygenic risk score, genetics, chronic obstructive pulmonary disease, lung function
2589-5370
Hernandez-Pacheco, Natalia
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Kilanowski, Anna
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Kumar, Ashish
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Curtin, John A.
b1f4f316-b8a3-438f-aeab-4c411ab41da2
Olvera, Núria
8284d2e2-7df8-4442-a0ea-26bd9a59a3de
Kress, Sara
d8a5b4c3-c124-4719-a7cd-660af00d5094
Bertels, Xander
05ba99bc-9aed-48cb-9242-cbdb3cac058a
Lahousse, Lies
bb60f667-86c3-4d21-b42e-d10cbd52d65b
Bhatta, Laxmi
380af51c-9ec6-49c3-94d8-26f82886c00e
Granell, Raquel
06e9e006-3754-4cc9-b3fc-42024bd05123
Roberts, Graham
a7d3042b-17ef-495e-a510-f54ab56d6134
Holloway, John
4bbd77e6-c095-445d-a36b-a50a72f6fe1a
et al.
Hernandez-Pacheco, Natalia
2c666efa-2bcc-47c4-bc11-7159dd5e9939
Kilanowski, Anna
12a9690f-4703-4d90-980e-0c2c53072061
Kumar, Ashish
f6b4297f-9f9d-4bc9-8970-bc90c74cc95f
Curtin, John A.
b1f4f316-b8a3-438f-aeab-4c411ab41da2
Olvera, Núria
8284d2e2-7df8-4442-a0ea-26bd9a59a3de
Kress, Sara
d8a5b4c3-c124-4719-a7cd-660af00d5094
Bertels, Xander
05ba99bc-9aed-48cb-9242-cbdb3cac058a
Lahousse, Lies
bb60f667-86c3-4d21-b42e-d10cbd52d65b
Bhatta, Laxmi
380af51c-9ec6-49c3-94d8-26f82886c00e
Granell, Raquel
06e9e006-3754-4cc9-b3fc-42024bd05123
Roberts, Graham
a7d3042b-17ef-495e-a510-f54ab56d6134
Holloway, John
4bbd77e6-c095-445d-a36b-a50a72f6fe1a

Hernandez-Pacheco, Natalia, Kilanowski, Anna and Kumar, Ashish , et al. (2024) Exploring the genetics of airflow limitation in lung function across the lifespan – a polygenic risk score study. EClinicalMedicine. (doi:10.1016/j.eclinm.2024.102731).

Record type: Article

Abstract

Background: chronic obstructive pulmonary disease (COPD) is caused by interactions between many factors across the life course, including genetics. A proportion of COPD may be due to reduced lung growth in childhood. We hypothesized that a polygenic risk score (PRS) for COPD is associated with lower lung function already in childhood and up to adulthood.

Methods: a weighted PRS was calculated based on the 82 association signals (p≤5x10-8) revealed by the largest GWAS of airflow limitation (defined as COPD) to date. This PRS was tested in association with lung function measures (FEV1, FVC, and FEV1/FVC) in subjects aged 4-50 years from 16 independent cohorts participating in the Chronic Airway Diseases Early Stratification (CADSET) Clinical Research Collaboration. Age-stratified meta-analyses were conducted combining the results from each cohort (n=45,406). These findings were validated in subjects >50 years old.

Findings: we found significant associations between the PRS for airflow limitation and: (1) lower pre-bronchodilator FEV1/FVC from school age (7-10 years; β: -0·13 z-scores per one PRS z-score increase [-0·15, -0·11], q-value=7·04x10-53) to adulthood (41-50 years; β: -0·16 [-0·19, -0·13], q-value=1·31x10-24); and (2) lower FEV1 (from school age: 7-10 years; β: -0·07 [-0·09, -0·05], q-value=1.65x10-9, to adulthood: 41-50 years; β: -0·17 [-0·20, -0·13], q-value=4.48 x 10-20). No effect modification by smoking, sex, or a diagnosis of asthma was observed.

Interpretation: we provide evidence that a higher genetic risk for COPD is linked to lower lung function from childhood onwards.

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Accepted/In Press date: 27 June 2024
e-pub ahead of print date: 12 August 2024
Keywords: Polygenic risk score, genetics, chronic obstructive pulmonary disease, lung function

Identifiers

Local EPrints ID: 492908
URI: http://eprints.soton.ac.uk/id/eprint/492908
ISSN: 2589-5370
PURE UUID: f0e3688a-8b4e-4f38-b113-ba43b2ba15c9
ORCID for John Holloway: ORCID iD orcid.org/0000-0001-9998-0464

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Date deposited: 20 Aug 2024 16:35
Last modified: 21 Aug 2024 01:35

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Contributors

Author: Natalia Hernandez-Pacheco
Author: Anna Kilanowski
Author: Ashish Kumar
Author: John A. Curtin
Author: Núria Olvera
Author: Sara Kress
Author: Xander Bertels
Author: Lies Lahousse
Author: Laxmi Bhatta
Author: Raquel Granell
Author: Graham Roberts
Author: John Holloway ORCID iD
Corporate Author: et al.

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