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Human shape perception spontaneously discovers the biological origin of novel, but natural, stimuli

Human shape perception spontaneously discovers the biological origin of novel, but natural, stimuli
Human shape perception spontaneously discovers the biological origin of novel, but natural, stimuli

Humans excel at categorizing objects by shape. This facility involves identifying shape features that objects have in common with other members of their class and relies - at least in part - on semantic/cognitive constructs. For example, plants sprout branches, fish grow fins, shoes are moulded to our feet. Can humans parse shapes according to the processes that give shapes their key characteristics, even when such processes are hidden? To answer this, we investigated how humans perceive the shape of cells from the olfactory system of Xenopus laevis tadpoles. These objects are novel to most humans yet occur in nature and cluster into classes following their underlying biological function. We reconstructed three-dimensional (3D) cell models through 3D microscopy and photogrammetry, then conducted psychophysical experiments. Human participants performed two tasks: they arranged 3D-printed cell models by similarity and rated them along eight visual dimensions. Participants were highly consistent in their arrangements and ratings and spontaneously grouped stimuli to reflect the cell classes, unwittingly revealing the underlying processes shaping these forms. Our findings thus demonstrate that human perceptual organization mechanisms spontaneously parse the biological systematicities of never-before-seen, natural shapes. Integrating such human perceptual strategies into automated systems may enhance morphology-based analysis in biology and medicine.

biological cell classification, generative models, perceptual organization, three-dimensional shape perception, visual similarity
1742-5689
Dehn, Kira Isabel
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Maiello, Guido
c122b089-1bbc-4d3e-b178-b0a1b31a5295
Hartmann, Frieder Tom
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Morgenstern, Yaniv
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Hawkins, Sara Joy
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Offner, Thomas
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Walter, Joshua
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Hassenklöver, Thomas
a3f6a27e-9fb9-4d1b-a6c1-f4b9f2b392ec
Manzini, Ivan
042c4e65-2636-4d7b-b8be-b93c4485afae
Fleming, Roland W.
41afa8fc-d604-4530-a455-2398c2902109
Dehn, Kira Isabel
8aa6ee01-37b9-41e1-8189-d7a620125112
Maiello, Guido
c122b089-1bbc-4d3e-b178-b0a1b31a5295
Hartmann, Frieder Tom
1f1886d3-fbf8-4ae1-a9aa-58e93608c8e0
Morgenstern, Yaniv
780d3b51-75e6-4d3c-bdf6-4a8a73fc3464
Hawkins, Sara Joy
24ae7909-42e8-4659-846f-f3e98e5c503a
Offner, Thomas
343355d5-90ff-484c-8659-0705684fa575
Walter, Joshua
b3a95380-c65f-4b3a-9fdc-3f00cf87b5ac
Hassenklöver, Thomas
a3f6a27e-9fb9-4d1b-a6c1-f4b9f2b392ec
Manzini, Ivan
042c4e65-2636-4d7b-b8be-b93c4485afae
Fleming, Roland W.
41afa8fc-d604-4530-a455-2398c2902109

Dehn, Kira Isabel, Maiello, Guido, Hartmann, Frieder Tom, Morgenstern, Yaniv, Hawkins, Sara Joy, Offner, Thomas, Walter, Joshua, Hassenklöver, Thomas, Manzini, Ivan and Fleming, Roland W. (2025) Human shape perception spontaneously discovers the biological origin of novel, but natural, stimuli. Journal of the Royal Society Interface, 22 (226), [20240931]. (doi:10.1098/rsif.2024.0931).

Record type: Article

Abstract

Humans excel at categorizing objects by shape. This facility involves identifying shape features that objects have in common with other members of their class and relies - at least in part - on semantic/cognitive constructs. For example, plants sprout branches, fish grow fins, shoes are moulded to our feet. Can humans parse shapes according to the processes that give shapes their key characteristics, even when such processes are hidden? To answer this, we investigated how humans perceive the shape of cells from the olfactory system of Xenopus laevis tadpoles. These objects are novel to most humans yet occur in nature and cluster into classes following their underlying biological function. We reconstructed three-dimensional (3D) cell models through 3D microscopy and photogrammetry, then conducted psychophysical experiments. Human participants performed two tasks: they arranged 3D-printed cell models by similarity and rated them along eight visual dimensions. Participants were highly consistent in their arrangements and ratings and spontaneously grouped stimuli to reflect the cell classes, unwittingly revealing the underlying processes shaping these forms. Our findings thus demonstrate that human perceptual organization mechanisms spontaneously parse the biological systematicities of never-before-seen, natural shapes. Integrating such human perceptual strategies into automated systems may enhance morphology-based analysis in biology and medicine.

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Accepted/In Press date: 24 April 2025
Published date: 21 May 2025
Keywords: biological cell classification, generative models, perceptual organization, three-dimensional shape perception, visual similarity

Identifiers

Local EPrints ID: 503314
URI: http://eprints.soton.ac.uk/id/eprint/503314
ISSN: 1742-5689
PURE UUID: 7088f5a7-2607-4d46-bdf0-5ac5215dd502
ORCID for Guido Maiello: ORCID iD orcid.org/0000-0001-6625-2583

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Date deposited: 29 Jul 2025 16:36
Last modified: 22 Aug 2025 02:38

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Contributors

Author: Kira Isabel Dehn
Author: Guido Maiello ORCID iD
Author: Frieder Tom Hartmann
Author: Yaniv Morgenstern
Author: Sara Joy Hawkins
Author: Thomas Offner
Author: Joshua Walter
Author: Thomas Hassenklöver
Author: Ivan Manzini
Author: Roland W. Fleming

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